4 results on '"Heike, Ehmann"'
Search Results
2. Minimal sex differences in gene expression in the rat superior olivary complex
- Author
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Christian Salzig, Patrick Lang, Heike Ehmann, Eckhard Friauf, Hans Gerd Nothwang, and Publica
- Subjects
Male ,Genetics ,Sex Characteristics ,Base Sequence ,Microarray ,Reverse Transcriptase Polymerase Chain Reaction ,Gene Expression Profiling ,GNRHR ,Gene Expression ,Olivary Nucleus ,Biology ,Sensory Systems ,Rats ,Rats, Sprague-Dawley ,Sexual dimorphism ,Gene expression profiling ,Transcriptome ,Superior olivary complex ,Gene expression ,Auditory Perception ,Animals ,Female ,XIST ,DNA Primers ,Oligonucleotide Array Sequence Analysis - Abstract
A critical issue in large-scale gene expression analysis is the impact of sexually dimorphic genes, which may confound the results when sampling across sexes. Here, we assessed, for the first time, sex differences at the transcriptome level in the auditory brainstem. To this end, microarray experiments covering the whole rat genome were performed in the superior olivary complex (SOC) of 16-day-old Sprague-Dawley rats. Sexually dimorphic genes were identified using two criteria: a >= 2-fold change and a P-value < 0.05. Only 12 out of 41,374 probes (0.03%) showed sexually dimorphic expression. For companson, pituitaries from 60-day-old female and male rats were analyzed, as this gland is known to display many sex-specific features. Indeed, almost 40 times more probes, i.e. 460 (1.1 %), displayed sexual dimorphism. Quantitative RT-PCR confirmed 47 out of 48 microarray results from both tissues. Taking microarray and qRT-PCR data together, the expression of six genes (Prl, Eif2s3y, Gnrhr, Panic, Ddx3y, Akr1c6) was higher in the male SOC, whereas two genes were upregulated in the female SOC (LOC302172, Xist). Four of these genes are sex-chromosome linked (Eif2s3y, Ddx3y, LOC302172, Xist). In summary, our data indicate only minor and negligible sex-specific differences in gene expression within the SOC at P16.
- Published
- 2008
3. Time-dependent gene expression analysis of the developing superior olivary complex
- Author
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Alexander K. Hartmann, Kathy Ushakov, Christian Salzig, Heiner Hartwich, Eckhard Friauf, Heike Ehmann, Karen B. Avraham, Hans Gerd Nothwang, Nadja Hartmann, Mathieu Clément-Ziza, Olaf R. P. Bininda-Emonds, Patrick Lang, and Publica
- Subjects
Sound localization ,inorganic chemicals ,Male ,Nerve Tissue Proteins ,Biology ,Biochemistry ,behavioral disciplines and activities ,Transcriptome ,Rats, Sprague-Dawley ,Hearing ,Neurobiology ,medicine ,otorhinolaryngologic diseases ,Auditory system ,Animals ,Humans ,Molecular Biology ,Gene ,Oligonucleotide Array Sequence Analysis ,Regulation of gene expression ,Genetics ,Cell Biology ,Auditory processing disorder ,medicine.disease ,Rats ,medicine.anatomical_structure ,Animals, Newborn ,Gene Expression Regulation ,Superior olivary complex ,Female ,Brainstem ,sense organs ,Neuroscience ,psychological phenomena and processes ,Brain Stem - Abstract
The superior olivary complex (SOC) is an essential auditory brainstem relay involved in sound localization. To identify the genetic program underlying its maturation, we profiled the rat SOC transcriptome at postnatal days 0, 4, 16, and 25 (P0, P4, P16, and P25, respectively), using genome-wide microarrays (41,012 oligonucleotides (oligos)). Differences in gene expression between two consecutive stages were highest between P4 and P16 (3.6%) and dropped to 0.06% between P16 and P25. To identify SOC-related genetic programs, we also profiled the entire brain at P4 and P25. The number of differentially expressed oligonucleotides between SOC and brain almost doubled from P4 to P25 (4.4% versus 7.6%). These data demonstrate considerable molecular specification around hearing onset, which is rapidly finalized. Prior to hearing onset, several transcription factors associated with the peripheral auditory system were up-regulated, probably coordinating the development of the auditory system. Additionally, crystallin-γ subunits and serotonin-related genes were highly expressed. The molecular repertoire of mature neurons was sculpted by SOC-related up- and down-regulation of voltage-gated channels and G-proteins. Comparison with the brain revealed a significant enrichment of hearing impairment-related oligos in the SOC (26 in the SOC, only 11 in the brain). Furthermore, 29 of 453 SOC-related oligos mapped within 19 genetic intervals associated with hearing impairment. Together, we identified sequential genetic programs in the SOC, thereby pinpointing candidates that may guide its development and ensure proper function. The enrichment of hearing impairment-related genes in the SOC may have implications for restoring hearing because central auditory structures might be more severely affected than previously appreciated.
- Published
- 2013
4. Left-asymmetric expression of Galanin in the linear heart tube of the mouse embryo is independent of the nodal co-receptor gene cryptic
- Author
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Axel Schweickert, Verena Mauch, Ursula Gaio, Stefan Britsch, Miriam Albrecht, Martin Blum, Heike Ehmann, and Kirsten Deissler
- Subjects
Nodal Protein ,Mutant ,Nodal signaling ,Galanin ,Biology ,03 medical and health sciences ,Mice ,Xenopus laevis ,0302 clinical medicine ,Gene expression ,Animals ,Heart looping ,Gene ,030304 developmental biology ,Body Patterning ,0303 health sciences ,Myocardium ,Brain ,Gene Expression Regulation, Developmental ,Embryo ,Heart ,Molecular biology ,Intercellular Signaling Peptides and Proteins ,NODAL ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Only very few left/right asymmetrically expressed genes are known in the mammalian embryo. In a screen for novel factors we identified the gene encoding the neuropeptide Galanin in mouse. At embryonic day (E) 8.5 asymmetric mRNA transcription was found in the left half of the linear heart tube. During heart looping and morphogenesis expression became restricted to the atrio-ventricular (AV) canal, followed by specific staining of the AV-node and AV-rings in the four-chambered heart. Expression was inverted in inv/inv and randomized in homozygous iv mutant embryos. Left-sided heart-specific transcription of mouse Gal thus should be controlled by the left-right pathway. The asymmetric pattern was retained in cryptic mutant embryos, in which the Nodal signaling cascade is disrupted. Surprisingly, Pitx2c was found to be expressed in 50% of cryptic mutant hearts as well, suggesting that some aspects of asymmetric gene expression in the heart are independent of cryptic. Developmental Dynamics 237:3557–3564, 2008. © 2008 Wiley-Liss, Inc.
- Published
- 2008
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