35 results on '"Hearty S"'
Search Results
2. Cardiac troponin I: a case study in rational antibody design for human diagnostics
- Author
-
Conroy, P.J., OʼKennedy, R.J., and Hearty, S.
- Published
- 2012
- Full Text
- View/download PDF
3. A Generic Method for Fungal Spore Detection:The Use of a Monoclonal Antibody and Surface Plasmon Resonance
- Author
-
Hansen, Peter Skottrup, Hearty, S., Frøkiær, H., Leonard, P., Hejgaard, J., O´kennedy, R., Nicolaisen, Mogens, and Justesen, Annemarie Fejer
- Published
- 2005
4. The structure of a chicken anti-prostate specific antigen scFv
- Author
-
Conroy, P.J., primary, Law, R.H.P., additional, Gilgunn, S., additional, Hearty, S., additional, Llyod, G., additional, Caradoc-Davies, T.T., additional, O'Kennedy, R.J., additional, and Whisstock, J.C., additional
- Published
- 2014
- Full Text
- View/download PDF
5. The structure of a chicken anti-cardiac Troponin I scFv
- Author
-
Conroy, P.J., primary, Law, R.H.P., additional, Gillgunn, S., additional, Hearty, S., additional, Caradoc-Davies, T.T., additional, Llyod, G., additional, O'Kennedy, R.J., additional, and Whisstock, J.C., additional
- Published
- 2014
- Full Text
- View/download PDF
6. A centrifugo-microfluidic cartridge with integrated detection optics towards automated at-line bioprocess monitoring of immunoglobulin G
- Author
-
Siegrist, J., Donohoe, G., Somers, M., Kurzbuch, D., Burger, R., Hearty, S., Murrell, J., Martin, C., Barrett, L., Mcdonagh, C., O Kennedy, R., and Jens Ducrée
7. Cell-targeted PD-1 agonists that mimic PD-L1 are potent T cell inhibitors.
- Author
-
Curnock AP, Bossi G, Kumaran J, Bawden LJ, Figueiredo R, Tawar R, Wiseman K, Henderson E, Hoong SJ, Gonzalez V, Ghadbane H, Knight DE, O'Dwyer R, Overton DX, Lucato CM, Smith NM, Reis CR, Page K, Whaley LM, McCully ML, Hearty S, Mahon TM, and Weber P
- Subjects
- Humans, Immune Checkpoint Inhibitors therapeutic use, Immunotherapy methods, Programmed Cell Death 1 Receptor metabolism, Receptors, Antigen, T-Cell antagonists & inhibitors
- Abstract
The PD-1/PD-L1 pathway is a key immune checkpoint that regulates T cell activation. There is strong rationale to develop PD-1 agonists as therapeutics against autoimmunity, but progress in this area has been limited. Here, we generated T cell receptor (TCR) targeting, PD-1 agonist bispecifics called ImmTAAI molecules that mimic the ability of PD-L1 to facilitate the colocalization of PD-1 with the TCR complex at the target cell-T cell interface. PD-1 agonist ImmTAAI molecules specifically bound to target cells and were highly effective in activating the PD-1 receptor on interacting T cells to achieve immune suppression. Potent PD-1 antibody ImmTAAI molecules closely mimicked the mechanism of action of endogenously expressed PD-L1 in their localization to the target cell-T cell interface, inhibition of proximal TCR signaling events, and suppression of T cell function. At picomolar concentrations, these bispecifics suppressed cytokine production and inhibited CD8+ T cell-mediated cytotoxicity in vitro. Crucially, in soluble form, the PD-1 ImmTAAI molecules were inactive and, hence, could avoid systemic immunosuppression. This study outlines a promising new route to generate more effective, potent, tissue-targeted PD-1 agonists that can inhibit T cell function locally with the potential to treat autoimmune and chronic inflammatory diseases of high unmet need.
- Published
- 2021
- Full Text
- View/download PDF
8. Decoding Selection Bias Imparted by Unpaired Cysteines: a Tug of War Between Expression and Affinity.
- Author
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Ayyar BV, Hearty S, and O'Kennedy R
- Subjects
- Alanine metabolism, Animals, Antibody Specificity, Bacteriophage M13 genetics, Enzyme-Linked Immunosorbent Assay, Myocardium, Peptide Library, Peroxidase immunology, Rabbits, Single-Chain Antibodies immunology, Troponin I immunology, Troponin I metabolism, Antibody Affinity, Cysteine metabolism, Single-Chain Antibodies genetics
- Abstract
In a recombinant antibody scFv format, the presence of an unpaired cysteine (Cys) is implicated in reduced soluble expression and inefficient presentation in phage display. Compared to other species, antibodies derived from rabbits are more likely to contain this unpaired Cys residue at position 80 (Cys80), when generated in a scFv format. In a screening campaign to isolate rabbit scFv against cardiac troponin I (cTnI), it was found that, a large proportion of isolated cTnI-specific clones contained unpaired Cys80. To analyze the factors that led to the selection of anti-cTnI Cys80 scFv, after five rounds of biopanning, the biopanning experiments were repeated with a Cys80 scFv (MG4
Cys ), its alanine variant (MG4Ala ), and an irrelevant high expressing scFv control. It was found that the selection and subsequent enrichment of MG4Cys scFv was ousted by the superior expressing variant MG4Ala , indicating that the Cys80 scFv was selected primarily due to its affinity. It is evident that phage-based selection is influenced by specific sequence characteristics affecting the expression as well as the binding specificity and this needs to be taken into account for selection of optimal antibody derivatives.- Published
- 2018
- Full Text
- View/download PDF
9. Measuring Antibody-Antigen Binding Kinetics Using Surface Plasmon Resonance.
- Author
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Hearty S, Leonard P, Ma H, and O'Kennedy R
- Subjects
- Antibodies metabolism, Buffers, Immobilized Proteins metabolism, Kinetics, Protein Binding, Temperature, Antigen-Antibody Reactions, Surface Plasmon Resonance methods
- Abstract
Surface plasmon resonance (SPR) is now widely embraced as a technology for monitoring a diverse range of protein-protein interactions and is considered almost de rigueur for characterizing antibody-antigen interactions. The technique obviates the need to label either of the interacting species, and the binding event is visualized in real time. Thus, it is ideally suited for screening crude, unpurified antibody samples that dominate early candidate panels following antibody selection campaigns. SPR returns not only concentration and affinity data but when used correctly can resolve the discrete component kinetic parameters (association and dissociation rate constants) of the affinity interaction. Herein, we outline some SPR-based generic antibody screening configurations and methodologies in the context of expediting data-rich ranking of candidate antibody panels and ensuring that antibodies with the optimal kinetic binding characteristics are reliably identified.
- Published
- 2018
- Full Text
- View/download PDF
10. Measuring Protein-Protein Interactions Using Biacore.
- Author
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Leonard P, Hearty S, Ma H, and O'Kennedy R
- Subjects
- Carrier Proteins metabolism, Kinetics, Ligands, Protein Binding, Proteins metabolism, Surface Plasmon Resonance methods, Biosensing Techniques methods, Carrier Proteins chemistry, Protein Interaction Mapping methods, Proteins chemistry
- Abstract
The use of optical biosensors for studying macromolecular interactions is gaining increasing popularity. In one study, 1514 papers that involved the application of biosensor data were identified for the year 2009 alone (Rich and Myszka, J Mol Recognit 24:892-914, 2011), the sheer volume and variety of which present a daunting task for the burgeoning biosensor user to accumulate and decipher. This chapter is designed to provide the reader with the tools necessary to prepare, design, and efficiently execute a kinetic experiment on Biacore. It is written to guide the Biacore user through basic theory, system maintenance, and assay setup while also offering some practical tips that we find useful for Biacore-based studies. Many kinetic-based screening assays require rigorous sample preparation and purification prior to analysis. To highlight these procedures, this protocol describes the kinetic characterization of single chain Fv (scFv) antibody fragments from crude bacterial lysates using an antibody affinity capture approach. Even though we specifically describe the capture of HA-tagged scFv antibody fragments to an anti-HA tag monoclonal antibody-immobilized surface prior to kinetic analysis, the same methodologies are universally applicable and can be used for practically any affinity pair and most Biacore systems.
- Published
- 2017
- Full Text
- View/download PDF
11. Facile domain rearrangement abrogates expression recalcitrance in a rabbit scFv.
- Author
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Ayyar BV, Hearty S, and O'Kennedy R
- Subjects
- Amino Acid Sequence, Animals, Cloning, Molecular, Enzyme-Linked Immunosorbent Assay, Freund's Adjuvant, Gene Expression Regulation, Immunization, Immunoglobulin G blood, Lipids, Molecular Sequence Data, Mutagenesis, Site-Directed, Rabbits, Recombinant Proteins genetics, Recombinant Proteins metabolism, Sequence Analysis, DNA, Serum Albumin, Single-Chain Antibodies metabolism, Troponin I immunology, Gene Rearrangement, Single-Chain Antibodies genetics
- Abstract
Rabbit-derived recombinant antibodies have traditionally been viewed as intractable molecules due to the presence of a cysteine in position 80 of the VL domain that becomes rendered 'aberrant' when present in the 'unpaired' context of a single chain Fv (scFv) and chimeric Fab formats. This aberrant Cys80 can severely impinge on the achievable expression levels when rabbit recombinant antibodies are produced in prokaryote systems. The unpaired Cys residue also renders purification problematic. Consequently, researchers often disregard rabbit antibody libraries due to perceived limitations in accessible repertoire diversity. We have shown that by switching the orientation of the VH and VL domains in an aberrant-Cys-containing rabbit scFv isolated in a bona fide screening campaign, it was possible to substantially increase the expression and purification yields of this clone. Furthermore, by incorporating a novel rabbit C-kappa constant fusion domain, we were able to potentiate a further increase in expression level and purify this antibody to a high degree of homogeneity, hitherto impossible to achieve using the aberrant-Cys-containing wild-type scFv. Cumulatively, these findings demonstrate that facile re-formatting can help make the rabbit antibody repertoire, a very valuable resource, more accessible to researchers in the field.
- Published
- 2015
- Full Text
- View/download PDF
12. Targeted delivery of a SNARE protease to sensory neurons using a single chain antibody (scFv) against the extracellular domain of P2X(3) inhibits the release of a pain mediator.
- Author
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Ma H, Meng J, Wang J, Hearty S, Dolly JO, and O'Kennedy R
- Subjects
- Animals, Botulinum Toxins, Type A genetics, Cells, Cultured, Female, Ganglia, Spinal cytology, Humans, Mice, Rabbits, Rats, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins genetics, Sensory Receptor Cells metabolism, Single-Chain Antibodies genetics, Botulinum Toxins, Type A chemistry, Calcitonin Gene-Related Peptide metabolism, Pain metabolism, Receptors, Purinergic P2X3 immunology, Recombinant Fusion Proteins pharmacology, Sensory Receptor Cells drug effects, Single-Chain Antibodies chemistry, Synaptosomal-Associated Protein 25 metabolism
- Abstract
P2X3 (P2X purinoceptor 3) is predominantly expressed on nociceptive sensory neurons and plays a crucial role in signalling leading to chronic inflammatory pain and some features of neuropathic pain. Thus it represents a potential target for pain therapeutics. BoNT/A (botulinum neurooxin type A) effectively relieves certain types of pain through inhibiting the neuronal release of pain peptides. A recombinant single-chain variable fragment (scFv) antibody designated MH7C was generated against the extracellular domain of P2X3 using phage display. The genes encoding the scFv and activated di-chain form of BoNT/A without the C-terminal-binding subdomain (LC-HN-HCN/A) were ligated and expressed in Escherichia coli cells as a composite fusion protein. The purified protein bound and entered P2X3-containing sensory neurons, cleaved synaptosomal-associated protein of 25 kDa and inhibited the release of a pain peptide. This novel fusion protein designated 'LC-HN-HCN/A-MH7C' has potential clinical applications in the treatment of chronic inflammatory and sympathetically maintained neuropathic pain.
- Published
- 2014
- Full Text
- View/download PDF
13. Reconciling the structural attributes of avian antibodies.
- Author
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Conroy PJ, Law RH, Gilgunn S, Hearty S, Caradoc-Davies TT, Lloyd G, O'Kennedy RJ, and Whisstock JC
- Subjects
- Amino Acid Sequence, Animals, Antibodies genetics, Chickens genetics, Crystallization, Crystallography, X-Ray, Humans, Kinetics, Molecular Sequence Data, Protein Structure, Tertiary, Single-Domain Antibodies chemistry, Single-Domain Antibodies genetics, Single-Domain Antibodies immunology, Structure-Activity Relationship, Antibodies chemistry, Antibodies immunology, Antigen-Antibody Reactions immunology, Chickens immunology
- Abstract
Antibodies are high value therapeutic, diagnostic, biotechnological, and research tools. Combinatorial approaches to antibody discovery have facilitated access to unique antibodies by surpassing the diversity limitations of the natural repertoire, exploitation of immune repertoires from multiple species, and tailoring selections to isolate antibodies with desirable biophysical attributes. The V-gene repertoire of the chicken does not utilize highly diverse sequence and structures, which is in stark contrast to the mechanism employed by humans, mice, and primates. Recent exploitation of the avian immune system has generated high quality, high affinity antibodies to a wide range of antigens for a number of therapeutic, diagnostic and biotechnological applications. Furthermore, extensive examination of the amino acid characteristics of the chicken repertoire has provided significant insight into mechanisms employed by the avian immune system. A paucity of avian antibody crystal structures has limited our understanding of the structural consequences of these uniquely chicken features. This paper presents the crystal structure of two chicken single chain fragment variable (scFv) antibodies generated from large libraries by phage display against important human antigen targets, which capture two unique CDRL1 canonical classes in the presence and absence of a non-canonical disulfide constrained CDRH3. These structures cast light on the unique structural features of chicken antibodies and contribute further to our collective understanding of the unique mechanisms of diversity and biochemical attributes that render the chicken repertoire of particular value for antibody generation., (© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.)
- Published
- 2014
- Full Text
- View/download PDF
14. A highly stable, sensitive, regenerable and rapid immunoassay for detecting aflatoxin B1 in corn incorporating covalent AFB1 immobilization and a recombinant Fab antibody.
- Author
-
Edupuganti SR, Edupuganti OP, Hearty S, and O'Kennedy R
- Subjects
- Antibodies, Immobilized biosynthesis, Antibody Affinity, Antibody Specificity, European Union, Hydrogen-Ion Concentration, Immunoglobulin Fab Fragments biosynthesis, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Reproducibility of Results, Sensitivity and Specificity, Solvents, Aflatoxin B1 analysis, Antibodies chemistry, Antibodies, Immobilized chemistry, Immunoassay, Immunoglobulin Fab Fragments chemistry, Zea mays chemistry
- Abstract
A highly robust immunoassay applicable for the detection of aflatoxin B1 (AFB1) using a Fab antibody fragment was developed. A key factor was the use of covalently immobilized AFB1 which allowed an almost three fold increase in sensitivity, reduced assay time and regeneration with retention of binding capacity. Various factors that might affect the sensitivity of the assay such as pH, organic solvents, storage stability and wash stringency were critically evaluated. It was also demonstrated that the assay was applicable for determination of AFB1 in corn samples at concentration within the European union regulatory limits., (© 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
15. At-line bioprocess monitoring by immunoassay with rotationally controlled serial siphoning and integrated supercritical angle fluorescence optics.
- Author
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Nwankire CE, Donohoe GG, Zhang X, Siegrist J, Somers M, Kurzbuch D, Monaghan R, Kitsara M, Burger R, Hearty S, Murrell J, Martin C, Rook M, Barrett L, Daniels S, McDonagh C, O'Kennedy R, and Ducrée J
- Subjects
- Calibration, Centrifugation instrumentation, Equipment Design, Fluorescence, Humans, Micro-Electrical-Mechanical Systems, Optics and Photonics instrumentation, Propylamines, Silanes chemistry, Immunoassay instrumentation, Immunoassay methods, Immunoglobulin G analysis, Microfluidic Analytical Techniques instrumentation
- Abstract
In this paper we report a centrifugal microfluidic "lab-on-a-disc" system for at-line monitoring of human immunoglobulin G (hIgG) in a typical bioprocess environment. The novelty of this device is the combination of a heterogeneous sandwich immunoassay on a serial siphon-enabled microfluidic disc with automated sequential reagent delivery and surface-confined supercritical angle fluorescence (SAF)-based detection. The device, which is compact, easy-to-use and inexpensive, enables rapid detection of hIgG from a bioprocess sample. This was achieved with, an injection moulded SAF lens that was functionalized with aminopropyltriethoxysilane (APTES) using plasma enhanced chemical vapour deposition (PECVD) for the immobilization of protein A, and a hybrid integration with a microfluidic disc substrate. Advanced flow control, including the time-sequenced release of on-board liquid reagents, was implemented by serial siphoning with ancillary capillary stops. The concentration of surfactant in each assay reagent was optimized to ensure proper functioning of the siphon-based flow control. The entire automated microfluidic assay process is completed in less than 30 min. The developed prototype system was used to accurately measure industrial bioprocess samples that contained 10 mg mL(-1) of hIgG., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
16. Measuring antibody-antigen binding kinetics using surface plasmon resonance.
- Author
-
Hearty S, Leonard P, and O'Kennedy R
- Subjects
- Buffers, Immobilized Proteins metabolism, Kinetics, Reference Standards, Surface Plasmon Resonance instrumentation, Temperature, Antigen-Antibody Reactions immunology, Surface Plasmon Resonance methods
- Abstract
Surface plasmon resonance (SPR) is now widely embraced as a technology for monitoring a diverse range of protein-protein interactions and is considered almost de rigueur for characterizing antibody-antigen interactions. The technique obviates the need to label either of the interacting species and the binding event is visualized in real-time. Thus, it is ideally suited for screening crude, unpurified antibody samples that dominate early candidate panels following antibody selection campaigns. SPR returns both concentration and affinity data but when used correctly can also resolve the discrete component kinetic parameters (association and dissociation rate constants) of the affinity interaction. Herein, we outline some SPR-based generic antibody screening configurations and methodologies in the context of expediting data-rich ranking of candidate antibody panels and ensuring that antibodies with the optimal kinetic binding characteristics are reliably identified.
- Published
- 2012
- Full Text
- View/download PDF
17. Novel disposable biochip platform employing supercritical angle fluorescence for enhanced fluorescence collection.
- Author
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Hill D, McDonnell B, Hearty S, Basabe-Desmonts L, Blue R, Trnavsky M, McAtamney C, O'Kennedy R, and MacCraith BD
- Subjects
- Avidin analysis, Biotin analysis, C-Reactive Protein analysis, Disposable Equipment, Equipment Design, Fluorescence, Humans, Protein Array Analysis instrumentation, Protein Array Analysis methods
- Abstract
This paper presents an overview of development of a novel disposable plastic biochip for multiplexed clinical diagnostic applications. The disposable biochip is manufactured using a low-cost, rapid turn- around injection moulding process and consists of nine parabolic elements on a planar substrate. The optical elements are based on supercritical angle fluorescence (SAF) which provides substantial enhancement of the fluorescence collection efficiency but also confines the fluorescence detection volume strictly to the immediate proximity of the biochip surface, thereby having the potential to discriminate against background fluorescence from the analyte solution. An optical reader is also described that enables interrogation and fluorescence collection from the nine optical elements on the chip. The sensitivity of the system was determined with a biotin-avidin assay while its clinical utility was demonstrated in an assay for C-reactive protein (CRP), an inflammation marker.
- Published
- 2011
- Full Text
- View/download PDF
18. Kinetics of immunoassays with particles as labels: effect of antibody coupling using dendrimers as linkers.
- Author
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Gubala V, Lynam CC, Nooney R, Hearty S, McDonnell B, Heydon K, O'Kennedy R, MacCraith BD, and Williams DE
- Subjects
- Kinetics, Nanoparticles chemistry, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Single-Chain Antibodies genetics, Single-Chain Antibodies immunology, Dendrimers chemistry, Immunoassay methods, Single-Chain Antibodies chemistry
- Abstract
In this article, we report on poly(amidoamine) dendrimers (PAMAM) as coupling agents for recombinant single-chain (ScFv) antibodies to nanoparticle (NP) labels, for use in immunoassay. We present a simple theory for the kinetics of particle capture onto a surface by means of an antibody-antigen reaction, in which the important parameter is the fraction of the particle surface that is active for reaction. We describe how increasing the generation number of the linking dendrimers significantly increased the fraction of the NP surface that is active for antigen binding and consequently also increased the assay kinetic rates. Use of dendrimers for conjugation of the NP to the antibody resulted in a significantly higher surface coverage of active antibody, in comparison with mono-valent linker chemistry. As a direct consequence, the increase in effective avidity significantly out-weighed any effect of a decreased diffusion coefficient due to the NP, when compared to that of a molecular dye-labelled antibody. The signal to noise ratio of the G4.5 dendrimer-sensitised nanoparticles out-performed the dye-labelled antibody by approximately four-fold. Particle aggregation experiments with the multi-valent antigen CRP demonstrated reaction-limited aggregation whose rate increased significantly with increasing generation number of the dendrimer linker.
- Published
- 2011
- Full Text
- View/download PDF
19. Exploiting recombinant antibodies in point-of-care (POC) diagnostics: the combinatorial advantage.
- Author
-
Hearty S and O'Kennedy R
- Subjects
- Biomarkers blood, Cardiovascular Diseases genetics, Cardiovascular Diseases immunology, Humans, Peroxidase immunology, Antibodies genetics, Antibodies immunology, Cardiovascular Diseases diagnosis, Point-of-Care Systems
- Abstract
Antibodies are ubiquitously deployed on in vitro diagnostic (IVD) platforms for detecting a panoply of analytes indicative of environmental and food contamination, residue adulteration and both veterinary and medical diagnostics. In the clinical realm, rapid and accurate determination of disease status is paramount. The significance of immunodiagnostic performance cannot be overemphasized and in many cases reliable diagnosis informs medical intervention which can mean the difference between patient recovery and demise. Cardiovascular disease (CVD) is the single biggest cause of adult mortality in the western world and principal burden on the healthcare services. Although the troponin (Tn) family, in particular troponin I (TnI), are regarded as the gold standard for diagnosis of myocardial damage, over the last decade much research has focused on the identification of alternative cardiac biomarker molecules that can either supplant or complement TnI metrics to add value to cardiac risk stratification criteria. In particular, markers that appear earlier than TnI in the pathophyisiology of cardiac disease are highly sought after. The subject of this addendum represents part of a broader challenge to deliver novel rapid point-of-care (POC) diagnostics to provide a chip-based multi-plexed platform for more comprehensive profiling of cardiac status with additive diagnostic and prognostic value. Specifically, it outlines proof-of-concept direct myeloperoxidase (MPO) detection, demonstrates the benefits of using recombinant antibodies in POC diagnostics and describes optimized strategies for generation of superior candidate antibody panels.
- Published
- 2011
- Full Text
- View/download PDF
20. A high-affinity recombinant antibody permits rapid and sensitive direct detection of myeloperoxidase.
- Author
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McDonnell B, Hearty S, Finlay WJ, and O'Kennedy R
- Subjects
- Animals, Chromatography, Affinity, Enzymes, Immobilized analysis, Enzymes, Immobilized blood, Enzymes, Immobilized immunology, Humans, Peptide Library, Peroxidase blood, Peroxidase immunology, Recombinant Proteins isolation & purification, Single-Chain Antibodies isolation & purification, Time Factors, Antibody Affinity, Immunoassay methods, Peroxidase analysis, Recombinant Proteins immunology, Single-Chain Antibodies immunology
- Abstract
Over the past 10 years, a growing field of research supporting the value of myeloperoxidase (MPO) as a prognostic indicator in acute cardiac pathophysiologies has emerged. The availability of a rapid and disposable MPO detection platform would enable research clinicians to more readily assess MPO indications for guiding therapy and also facilitate clinicians at the patient interface to readily adopt MPO testing and potentially drive more informed prognoses. Here we describe the isolation of a high-affinity avian MPO-specific recombinant antibody panel using phage display. Rapid isolation of a suitable single-chain variable fragment (scFv) antibody was facilitated using a surface plasmon resonance (SPR)-based "off-rate ranking" screening process. The selected scFv was then successfully incorporated into a rapid, simple, and sensitive one-step lateral flow immunoassay (LFIA) for the detection of MPO. This "one-step" feature of the developed assay was made possible by the scFv's strong affinity for MPO, obviating the need for sandwich signal enhancement steps. The assay's rapid performance was also further enhanced by exploiting the intrinsic enzymatic properties of MPO in its final detection. Use of the optimized LFIA facilitated the sensitive detection of MPO in MPO-depleted serum within clinically relevant reference ranges., (2010 Elsevier Inc. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
21. Measuring protein-protein interactions using Biacore.
- Author
-
Leonard P, Hearty S, and O'Kennedy R
- Subjects
- Animals, Biosensing Techniques instrumentation, Humans, Immobilized Proteins chemistry, Immobilized Proteins metabolism, Kinetics, Ligands, Protein Binding, Proteins chemistry, Surface Properties, Biosensing Techniques methods, Proteins metabolism
- Abstract
The use of optical biosensors for studying macromolecular interactions is gaining increasing popularity. In one study, 1,179 papers that involved the application of biosensor data were identified for the year 2007 alone (Rich and Myszka, J Mol Recognit 21:355-400, 2008), the sheer volume and variety of which present a daunting task for the burgeoning biosensor user to accumulate and decipher. This chapter is designed to provide the reader with the tools necessary to prepare, design, and efficiently execute a kinetic experiment on Biacore. It is written to guide the Biacore user through basic theory, system maintenance, and assay set-up while also offering some practical tips that we find useful for Biacore-based studies. Many kinetic-based screening assays require rigorous sample preparation and purification prior to analysis. To highlight these procedures, this protocol describes the kinetic characterisation of single chain Fv (scFv) antibody fragments from crude bacterial lysates using an antibody affinity capture approach. Even though we specifically describe the capture of HA-tagged scFv antibody fragments to an anti-HA tag monoclonal antibody-immobilised surface prior to kinetic analysis, the same methodologies are universally applicable and can be used for practically any affinity pair and most Biacore systems.
- Published
- 2011
- Full Text
- View/download PDF
22. Highly sensitive recombinant antibodies capable of reliably differentiating heart-type fatty acid binding protein from noncardiac isoforms.
- Author
-
Ayyar BV, Hearty S, and O'Kennedy R
- Subjects
- Cross Reactions, Fatty Acid Binding Protein 3, Fatty Acid-Binding Proteins chemistry, Fatty Acid-Binding Proteins immunology, Humans, Kinetics, Myocardium metabolism, Myoglobin chemistry, Peptide Library, Protein Isoforms analysis, Protein Isoforms chemistry, Protein Isoforms immunology, Recombinant Proteins chemistry, Recombinant Proteins immunology, Recombinant Proteins metabolism, Single-Chain Antibodies chemistry, Single-Chain Antibodies genetics, Surface Plasmon Resonance, Enzyme-Linked Immunosorbent Assay methods, Fatty Acid-Binding Proteins analysis, Single-Chain Antibodies immunology
- Abstract
During recent times, heart-type fatty acid binding protein (hFABP) has gained increasing credence as a promising cardiac biomarker. This is largely due to its rapid myocardial release and subsequent clearance kinetics, which are superior to those of myoglobin and offer an earlier diagnostic window than the troponins. Realization of its full diagnostic and prognostic potential is dependent on accessibility to robust hFABP-specific assays. Here we describe a rational strategy for generation and screening of hFABP-specific avian-derived recombinant antibodies. These antibodies were confirmed to be exquisitely specific for hFABP, with no cross-reactivity observed in a representative panel of the most homologous non-heart-type FABP isoforms. All of the antibodies tested exhibited single-figure nanomolar affinities, and their analytical potential was demonstrated in a simple inhibition enzyme-linked immunosorbent assay (ELISA) format that returned an impressive limit of quantitation (LOQ) value of 1.9 ng/ml. The cumulative results underline the potential value of these antibodies as enabling reagents for use in a variety of immunodiagnostic configurations., (Copyright © 2010 Elsevier Inc. All rights reserved.)
- Published
- 2010
- Full Text
- View/download PDF
23. Surface plasmon resonance for vaccine design and efficacy studies: recent applications and future trends.
- Author
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Hearty S, Conroy PJ, Ayyar BV, Byrne B, and O'Kennedy R
- Subjects
- AIDS Vaccines immunology, Animals, Binding Sites, Cancer Vaccines immunology, HIV Envelope Protein gp120 immunology, HIV Envelope Protein gp41 immunology, High-Throughput Screening Assays, Humans, Influenza Vaccines immunology, Malaria Vaccines immunology, Surface Plasmon Resonance methods, Vaccines immunology
- Abstract
The lack of a clear correlation between design and protection continues to present a barrier to progress in vaccine research. In this article, we outline how surface plasmon resonance (SPR) biosensors are emerging as tools to help resolve some of the key biophysical determinants of protection and, thereby, facilitate more rational vaccine design campaigns. SPR technology has contributed significantly to our understanding of the complex biophysical determinants of HIV neutralization and offers a platform for preclinical evaluation of vaccine candidates. In particular, the concept of reverse-engineering HIV vaccine targets based on known broadly neutralizing antibody modalities is explored and extended to include other infectious diseases, such as malaria and influenza, and other diseases such as cancer. The analytical capacity afforded by SPR includes serum screening to monitor immune responses and highly efficient quality-control surveillance measures. These are discussed alongside key technological advances, such as developments in sample throughput, and a perspective predicting continued growth and diversification of the role of SPR in vaccine development is proposed.
- Published
- 2010
- Full Text
- View/download PDF
24. Nanomedicine: barcodes check out prostate cancer.
- Author
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Hearty S, Leonard P, and O'Kennedy R
- Subjects
- Antibodies immunology, Humans, Male, Nanomedicine, Prostate-Specific Antigen immunology, Biosensing Techniques methods, Gold chemistry, Metal Nanoparticles chemistry, Prostate-Specific Antigen blood, Prostatic Neoplasms diagnosis
- Published
- 2010
- Full Text
- View/download PDF
25. Cardiac biomarkers and the case for point-of-care testing.
- Author
-
McDonnell B, Hearty S, Leonard P, and O'Kennedy R
- Subjects
- Immunoassay, Inflammation metabolism, Myocardial Ischemia metabolism, Biomarkers analysis, Biomarkers metabolism, Cardiovascular Diseases metabolism
- Abstract
Cardiovascular disease (CVD) is the single greatest cause of adult mortality in the western world and, consequently, places a massive burden on healthcare services and the economy. Lifestyles, lack of clearly defined risk assessment criteria, consistently high incidences of misdiagnosis and inappropriate referrals, all contribute significantly to this problem. It also correlates directly with inefficient or non-accessible early detection systems. Over the last decade much research has focused on the identification of cardiac biomarkers that can be used for the detection of cardiac distress and that add value to current risk stratification criteria. An exposition of some of the most consistently cited biomarkers is provided and their current status and potential value as early CVD risk predictors, more accurate diagnostic markers of acute myocardial damage and as reliable prognostic indicators, is evaluated. The particular importance of early prediction and the integral role that point-of-care (POC) testing is expected to play in the future of cardiac care is critically discussed.
- Published
- 2009
- Full Text
- View/download PDF
26. Antibody production, design and use for biosensor-based applications.
- Author
-
Conroy PJ, Hearty S, Leonard P, and O'Kennedy RJ
- Subjects
- Animals, Antibodies genetics, Databases, Factual, Electrochemical Techniques, Humans, Recombinant Proteins genetics, Recombinant Proteins immunology, Recombinant Proteins metabolism, Antibodies immunology, Antibodies metabolism, Biosensing Techniques methods
- Abstract
Currently, the reliable detection and quantification of a multitude of different analytes is crucial in many applications and settings. Biosensors have revolutionised diagnostics for use in point-of-care testing (POC), the detection of food and environmental contaminants, biological warfare agents, illicit drugs and human/animal disease markers. Antibodies continue to play a pivotal role in many sensor devices due to their exquisite specificity for their cognate antigens. In this review current biosensor platforms employing antibodies for molecular recognition are briefly described. The use of molecular biological techniques for the generation and improvement of antibodies is critically examined. Such recombinant antibodies possess improved attributes for use in biosensor development in terms of design, stability, affinity and specificity.
- Published
- 2009
- Full Text
- View/download PDF
27. Helicobacter pylori lipopolysaccharide interacts with TFF1 in a pH-dependent manner.
- Author
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Reeves EP, Ali T, Leonard P, Hearty S, O'Kennedy R, May FE, Westley BR, Josenhans C, Rust M, Suerbaum S, Smith A, Drumm B, and Clyne M
- Subjects
- Bacterial Adhesion physiology, Child, Colony Count, Microbial, Electrophoresis, Polyacrylamide Gel, Flow Cytometry, Gastric Mucosa metabolism, Gastric Mucosa pathology, Helicobacter Infections microbiology, Helicobacter Infections pathology, Helicobacter pylori isolation & purification, Humans, Hydrogen-Ion Concentration, Trefoil Factor-1, Trefoil Factor-2, Gastric Mucosa microbiology, Helicobacter Infections metabolism, Helicobacter pylori metabolism, Lipopolysaccharides metabolism, Tumor Suppressor Proteins metabolism
- Abstract
Background & Aims: Little is known about how bacteria establish chronic infections of mucosal surfaces. Helicobacter pylori (H. pylori), a chronic pathogen that lives in the gastric mucosa of humans, interacts with the trefoil factor family (TFF) protein TFF1, which is found in gastric mucus. We aimed to characterize the interaction of H. pylori with TFF1 and to assess the role of this interaction in mediating colonization., Methods: Subcellular fractions of H. pylori were immobilized and then probed with TFF1, TFF2, or TFF3. The effect of glycosidases and preincubation with monosaccharides on the interaction and binding of TFF1 to a H. pylori adhesin was assessed. The interaction between H. pylori adhesin and TFF1 was characterized using surface plasmon resonance, flow cytometry, nondenaturing polyacrylamide gel electrophoresis, coimmunofluoresence, and incubation with tissue sections., Results: The H. pylori core oligosaccharide portion (rough form) of lipopolysaccharide (RF-LPS) bound to TFF1 and to a lesser extent TFF3; this interaction was inhibited by incubation of RF-LPS with mannosidase, glucosidase, or mixed monosaccharides. TFF1 also bound to human serum albumin-conjugated mannose and glucose. The optimum pH for binding was 5.0-6.0 for TFF1 and 7.0 for TFF3. H. pylori bound TFF1 in gastric mucus ex vivo; binding of LPS-coated latex beads to human antral gastric tissue was inhibited by TFF1., Conclusions: TFF1 interacts specifically with H. pylori RF-LPS. The pH dependence of this interaction indicates that binding of H. pylori to TFF1 in the stomach could promote colonization of the mucus layer adjacent to the gastric epithelial surface.
- Published
- 2008
- Full Text
- View/download PDF
28. High throughput ranking of recombinant avian scFv antibody fragments from crude lysates using the Biacore A100.
- Author
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Leonard P, Säfsten P, Hearty S, McDonnell B, Finlay W, and O'Kennedy R
- Subjects
- Animals, C-Reactive Protein immunology, Escherichia coli chemistry, Escherichia coli genetics, Immunoglobulin Variable Region genetics, Kinetics, Recombinant Proteins genetics, Chickens immunology, Directed Molecular Evolution, Immunoglobulin Variable Region isolation & purification, Recombinant Proteins isolation & purification, Surface Plasmon Resonance methods
- Abstract
Advances in molecular evolution strategies have made it possible to identify antibodies with exquisite specificities and also to fine-tune their biophysical properties for practically any specified application. Depending on the desired function, antibody/antigen interactions can be long-lived or short-lived and, therefore, particular attention is needed when seeking to identify antibodies with specific reaction-rate and affinity properties. Surface plasmon resonance (SPR) biosensors routinely generate sensitive and reliable kinetic data from antibody/antigen interactions for both therapeutic and diagnostic applications. However, many kinetic-based screening assays require rigorous sample preparation and purification prior to analysis. To ameliorate this problem, we developed a rapid and reliable assay for characterising recombinant scFv antibody fragments, directly from crude bacterial lysates. Ninety-six scFv antibodies derived from chickens immunised with C-reactive protein (CRP) were selected by phage display and evaluated using the Biacore A100 protein interaction array system. Antibodies were captured from crude bacterial extracts on the sensor chip surface and ranked based on the percentage of the complex left (% left) after dissociation in buffer. Kinetic rate constants (k(a) and k(d)) and affinity (K(D)) data were obtained for six clones that bound monomeric CRP across a broad affinity range (2.54 x 10(-8) to 3.53 x 10(-10) M). Using this assay format the A100 biosensor yielded high quality kinetic data, permitting the screening of nearly 400 antibody clones per day.
- Published
- 2007
- Full Text
- View/download PDF
29. Detection of fungal spores using a generic surface plasmon resonance immunoassay.
- Author
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Skottrup P, Hearty S, Frøkiaer H, Leonard P, Hejgaard J, O'Kennedy R, Nicolaisen M, and Justesen AF
- Subjects
- Bacterial Proteins immunology, Basidiomycota immunology, Biosensing Techniques instrumentation, Colony Count, Microbial instrumentation, Immunoassay instrumentation, Spores, Fungal immunology, Surface Plasmon Resonance instrumentation, Basidiomycota isolation & purification, Biosensing Techniques methods, Colony Count, Microbial methods, Immunoassay methods, Spores, Fungal isolation & purification, Surface Plasmon Resonance methods
- Abstract
This paper describes a biosensor-based method for detection of fungal spores using surface plasmon resonance (SPR). The approach involves the use of a mouse monoclonal antibody (Pst mAb8) and a SPR sensor for label-free detection of urediniospores from the model organism Puccinia striiformis f.sp. tritici (Pst). In the subtractive inhibition assay, urediniospores and Pst mAb8 were mixed, urediniospore-bound Pst mAb8 removed by centrifugation and the remaining Pst mAb8 quantified using the SPR sensor. Assay conditions were optimised and a detection limit of 3.1 x 10(5)urediniospores/ml was achieved. Spiked Pst samples were further examined in a background of a related spore and it was found that Pst detection was possible in this mixture. This study represent the first use of SPR technology for fungal spore detection as well as the first report of a successful biosensor-based detection strategy for Pst.
- Published
- 2007
- Full Text
- View/download PDF
30. Monoclonal antibodies for the detection of Puccinia striiformis urediniospores.
- Author
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Skottrup P, Frøkiaer H, Hearty S, O'Kennedy R, Hejgaard J, Nicolaisen M, and Justesen AF
- Subjects
- Animals, Antibodies, Fungal biosynthesis, Antibodies, Monoclonal biosynthesis, Antibody Specificity, Epitopes immunology, Mice, Mice, Inbred BALB C, Plant Diseases microbiology, Spores, Fungal immunology, Triticum microbiology, Antibodies, Fungal immunology, Antibodies, Monoclonal immunology, Basidiomycota immunology
- Abstract
The fungal pathogen Pst causes yellow rust disease in wheat plants leading to crop losses. The organism spreads by releasing wind-dispersed urediniospores from infected plants. In this study a library of novel monoclonal antibodies (mAbs) was developed against Pst urediniospores. Nine mAb-producing cell lines were cloned and their cross-reactivities characterised against a panel of airborne fungal spores representing genera commonly found in the same environment as Pst. Two specific mAbs were used to develop a competitive ELISA (Pst mAb4) and a subtractive inhibition ELISA (Pst mAb8). Standard curves for both assays had good intra- and interday reproducibility. The subtractive inhibition ELISA had greater sensitivity with a detection limit of 1.5 x 10(5) spores ml(-1). Cross-reactivity studies of Pst mAb8 in the subtractive inhibition ELISA, showed reaction with other Puccinia spores only, suggesting that common epitopes exist within this genus. The biosensor-compatible Pst mAb8 assay principle developed in this study has the potential to be implemented in future 'label-free' in-the-field systems for Pst detection.
- Published
- 2007
- Full Text
- View/download PDF
31. The development of rapid fluorescence-based immunoassays, using quantum dot-labelled antibodies for the detection of Listeria monocytogenes cell surface proteins.
- Author
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Tully E, Hearty S, Leonard P, and O'Kennedy R
- Subjects
- Antibodies, Bacterial immunology, Antibodies, Monoclonal immunology, Bacterial Proteins genetics, Bacterial Proteins immunology, Escherichia coli chemistry, Escherichia coli genetics, Immunoassay methods, Membrane Proteins genetics, Membrane Proteins immunology, Recombinant Proteins genetics, Recombinant Proteins immunology, Recombinant Proteins isolation & purification, Bacterial Proteins isolation & purification, Listeria monocytogenes genetics, Listeria monocytogenes immunology, Membrane Proteins isolation & purification, Quantum Dots
- Abstract
Listeria monocytogenes is an important food-borne pathogen with an extremely high mortality rate (approximately 30%). Therefore, a highly sensitive, reproducible and rapid assay for its detection is vital. L. monocytogenes cells employ two surface bound proteins, Internalin A (InlA) and Internalin B (InlB) to promote invasion into host cells. Recombinant forms of both proteins were previously cloned and expressed in Escherichia coli. In this paper we describe how the InlB protein was sub-divided into three shorter overlapping peptide fragments yielding truncated functional protein of M(R) 23, 35 and 45 kDa, respectively. Purification of the InlB fragments by immobilised metal affinity chromatography (IMAC) was optimised and confirmed by electrophoresis and Western blotting. Identification of the antibody binding regions was achieved by probing the expressed polypeptide domains with a panel of antibodies and antibody fragments. The cloned peptide fragments were also used to develop novel fluorescence-based immunoassays incorporating quantum dots. The application of quantum dot-labelled anti-InlA monoclonal antibodies for immunostaining L. monocytogenes was also demonstrated.
- Published
- 2006
- Full Text
- View/download PDF
32. Production, characterisation and potential application of a novel monoclonal antibody for rapid identification of virulent Listeria monocytogenes.
- Author
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Hearty S, Leonard P, Quinn J, and O'Kennedy R
- Subjects
- Animals, Antibodies, Monoclonal immunology, Antigens, Bacterial chemistry, Antigens, Bacterial immunology, Bacterial Proteins biosynthesis, Bacterial Proteins chemistry, Bacterial Proteins genetics, Bacterial Proteins immunology, Biosensing Techniques, Blotting, Western, Enzyme-Linked Immunosorbent Assay, Epitopes, Female, Listeria monocytogenes genetics, Listeria monocytogenes immunology, Mice, Mice, Inbred BALB C, Microscopy, Atomic Force, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins immunology, Sensitivity and Specificity, Surface Plasmon Resonance, Antibodies, Monoclonal biosynthesis, Antibodies, Monoclonal chemistry, Food Microbiology, Listeria monocytogenes isolation & purification, Listeriosis prevention & control
- Abstract
A panel of hybridomas was produced using intact Listeria monocytogenes serotype 1/2a cells as the immunogen. An IgG2a monoclonal antibody (mAb) 'mAb2B3' was isolated that reacted with L. monocytogenes but not with a representative panel of related Listeria spp. and non-Listeria spp. Binding activity was greatest against L. monocytogenes serotype 1/2a and was significantly enhanced when cells were prepared in Listeria enrichment broth (LEB). The reactive epitope was deduced, by immunoblot analysis, to be a surface localised protein of approximately 80 kilodaltons (kDa), putatively assumed to be internalin A (InlA). Recombinant InlA protein was subsequently expressed in Escherischia coli. When crude E. coli cell lysates were subjected to immunoblot analysis, it was demonstrated that the mAb bound specifically to the heterologously expressed recombinant InlA protein, thus confirming the specificity of the mAb. The mAb was further evaluated in a series of enzyme-linked-immunosorbent assay (ELISA)-based formats and in a surface plasmon resonance (SPR)-based biosensor platform. Both configurations were capable of differential identification of virulent L. monocytogenes at concentrations greater than or equal to 1x10(7) cells/ml. Notwithstanding the apparent insensitivity, the results indicate that InlA could be exploited as a marker for highly specific confirmatory identification of pathogenic L. monocytogenes following primary enrichment of suspect food samples, using the anti-InlA antibody 'mAb2B3', described herein.
- Published
- 2006
- Full Text
- View/download PDF
33. Rapid analysis of coumarins using surface plasmon resonance.
- Author
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Lacy A, Dunne L, Fitzpatrick B, Daly S, Keating G, Baxter A, Hearty S, and O'Kennedy R
- Subjects
- Aflatoxin B1 analysis, Animals, Coumarins chemistry, Immunoglobulin G chemistry, Models, Chemical, Reproducibility of Results, Umbelliferones analysis, Warfarin antagonists & inhibitors, Warfarin pharmacology, Biosensing Techniques instrumentation, Biosensing Techniques methods, Chemistry Techniques, Analytical methods, Coumarins analysis, Surface Plasmon Resonance methods
- Abstract
Coumarin molecules are ubiquitous in nature. Several have come to prominence as potential clinical therapeutic candidates. The principal example is warfarin, which is a very widely prescribed anticoagulant. Other coumarin derivatives, such as aflatoxin B1, are insidious contaminants in crop-derived foodstuffs. Extreme potency is a common feature of all biochemically active coumarins and, thus reliable methods for their rapid and sensitive detection are of paramount importance. Accordingly, this review examines the current methods used in the analysis of these molecules and compares them with immunoassay-based strategies. As a case study, we report on our experiences with using coumarin-specific polyclonal, monoclonal, and recombinant antibodies in conjunction with a surface plasmon resonance-based biosensor for analysis of coumarins. We chart the assay development process and demonstrate high sensitivity and reproducibility that compares favorably with established methodologies.
- Published
- 2006
34. Development of a surface plasmon resonance-based immunoassay for Listeria monocytogenes.
- Author
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Leonard P, Hearty S, Wyatt G, Quinn J, and O'Kennedy R
- Subjects
- Animals, Antibodies, DNA, Bacterial analysis, Electrophoresis, Polyacrylamide Gel, Enzyme-Linked Immunosorbent Assay, Listeria monocytogenes immunology, Molecular Weight, Reproducibility of Results, Sensitivity and Specificity, Food Contamination analysis, Food Microbiology, Listeria monocytogenes isolation & purification, Surface Plasmon Resonance methods
- Abstract
A polyclonal antibody was produced against Internalin B (InlB)-enriched extract and used to develop an inhibition assay to detect Listeria monocytogenes cells in solution using surface plasmon resonance. The gene sequence encoding for the InlB protein was cloned into a Qiagen pQE-60 vector, expressed in Escherichia coli, and purified by immobilized metal affinity chromatography. Protein G-purified anti-InlB-enriched extract polyclonal antibody was incubated with various concentrations of L. monocytogenes cells and subsequently injected over a purified-recombinant InlB (rInlB)-immobilized CM5 sensor chip surface. A decrease in antibody binding response was observed with increasing L. monocytogenes cell concentrations. Intraday and interday assay variability studies were carried out to evaluate precision and reproducibility. The assay had a limit of detection of less than 2 x 10(5) cells per ml and could be successfully reproduced with coefficients of variation of between 2.5 and 7.7%.
- Published
- 2005
- Full Text
- View/download PDF
35. A generic approach for the detection of whole Listeria monocytogenes cells in contaminated samples using surface plasmon resonance.
- Author
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Leonard P, Hearty S, Quinn J, and O'Kennedy R
- Subjects
- Animals, Goats, Immunoglobulin Fab Fragments immunology, Listeria monocytogenes immunology, Rabbits, Time Factors, Food Microbiology, Listeria monocytogenes isolation & purification, Surface Plasmon Resonance
- Abstract
The opportunistic food pathogen Listeria monocytogenes is of great concern to the food industry and its rapid detection is of major importance. This paper describes the detection of L. monocytogenes with a polyclonal antibody by means of a new subtractive inhibition assay using a BIAcore 3000 biosensor. Incubating L. monocytogenes cells and antibody for a short period of time, followed by subsequent separation of free unbound antibody with a stepwise centrifugation process, allowed the detection of 1 x 10(5) L. monocytogenes cells/ml in less than 30 min. Free antibody was passed over an anti-Fab ligand-coated sensor chip surface with the generated response being inversely proportional to the inhibiting cell concentration. The method was simple, rapid and needed minimum sample preparation. This assay format has the potential for the quick and sensitive detection of pathogens with limited sample handling and preparation.
- Published
- 2004
- Full Text
- View/download PDF
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