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We give an explicit description of all quasismooth, rational, projective surfaces of Picard number one that admit a non-trivial torus action and have an integral canonical self intersection number., Comment: 38 pages

Developing physics-based models for molecular simulation requires fitting many unknown parameters to experimental datasets of diverse properties. Fitting such diverse data is typically carried out piecemeal, resulting in a "zoo" of disconnected but highly related models. Here, we leverage recently developed methods for computing low-variance gradient estimates with automatic differentiation to facilitate the extensible, reproducible, and transparent fitting of the physics-based DNA model oxDNA. We demonstrate simultaneous fitting to structural, mechanical, and thermodynamic data using a variety of techniques, including enhanced sampling, external forcing, cluster-move Monte Carlo schemes, and micro- and millisecond timescales, and fit oxDNA to a range of target properties, such as twist-stretch couplings and duplex melting temperatures. We also demonstrate how gradients can serve as an efficient means of sensitivity analysis through which we uncover the surprising importance of the cross-stacking interaction in oxDNA. Though grounded in oxDNA, this work provides a framework for extensible, community-driven force field development more generally that will yield rapidly improved models and subsequent physical insights for systems ranging from RNA to protein to their interactions with inorganic materials.

One of the more surprising findings after the first year of JWST observations is the large number of spatially extended galaxies (ultra-red flattened objects, or UFOs) among the optically-faint galaxy population otherwise thought to be compact. Leveraging the depth and survey area of the JADES survey, we extend observations of the optically-faint galaxy population to an additional 112 objects, 56 of which are well-resolved in F444W with effective sizes, $R_e > 0.25''$, more than tripling previous UFO counts. These galaxies have redshifts around $2 < z < 4$, high stellar masses ($\mathrm{log(M_*/M_{\odot})} \sim 10-11$), and star-formation rates around $\sim 100-1000 \mathrm{M_{\odot}/yr}$. Surprisingly, UFOs are red across their entire extents which spatially resolved analysis of their stellar populations shows is due to large values of dust attenuation (typically $A_V > 2$ mag even at large radii). Morphologically, the majority of our UFO sample tends to have low S\'ersic indices ($n \sim 1$) suggesting these large, massive, optically faint galaxies have little contribution from a bulge in F444W. Further, a majority have axis-ratios between $0.2 < q < 0.4$, which Bayesian modeling suggests that their intrinsic shapes are consistent with being a mixture of inclined disks and prolate objects with little to no contribution from spheroids. While kinematic constraints will be needed to determine the true intrinsic shapes of UFOs, it is clear that an unexpected population of large, disky or prolate objects contributes significantly to the population of optically faint galaxies., Comment: 24 pages, 13 figures; accepted for publication in The Astrophysical Journal

The Markov triples, that means the positive integer solutions of the equation $x^2+y^2+z^2=3xyz$, form the vertex set of the Markov tree. Each Markov triple defines a weighted projective plane, which gives a geometric interpretation of the vertex. We exhibit a class of rational, projective $\mathbb{C}^*$-surfaces representing the edges of the Markov tree in the sense that they admit coverings onto the adjacent weighted projective planes. Our main result shows that the surfaces representing the Markov tree are precisely the normal degenerations of the projective plane admitting a non-trivial $\mathbb{C}^*$-action., Comment: 14 pages, minor update, references added

We present an ultraviolet-to-infrared search for the electromagnetic (EM) counterpart to GW190425, the second-ever binary neutron star (BNS) merger discovered by the LIGO-Virgo-KAGRA Collaboration (LVK). GW190425 was more distant and had a larger localization area than GW170817, therefore we use a new tool teglon to redistribute the GW190425 localization probability in the context of galaxy catalogs within the final localization volume. We derive a 90th percentile area of 6,688 deg$^{2}$, a $\sim$1.5$\times$ improvement relative to the LIGO/Virgo map, and show how teglon provides an order of magnitude boost to the search efficiency of small ($\leq$1 deg$^{2}$) field-of-view instruments. We combine our data with all publicly reported imaging data, covering 9,078.59 deg$^2$ of unique area and 48.13% of the LIGO/Virgo-assigned localization probability, to calculate the most comprehensive kilonova, short gamma-ray burst (sGRB) afterglow, and model-independent constraints on the EM emission from a hypothetical counterpart to GW190425 to date under the assumption that no counterpart was found in these data. If the counterpart were similar to AT 2017gfo, there was a 28.4% chance that it would have been detected in the combined dataset. We are relatively insensitive to an on-axis sGRB, and rule out a generic transient with a similar peak luminosity and decline rate as AT 2017gfo to 30% confidence. Finally, across our new imaging and all publicly-reported data, we find 28 candidate optical counterparts that we cannot rule out as being associated with GW190425, finding that 4 such counterparts discovered within the localization volume and within 5 days of merger exhibit luminosities consistent with a kilonova., Comment: 41 pages, 11 figures, Submitted to ApJ

We present the third data release of JADES, the JWST Advanced Deep Extragalactic Survey, providing both imaging and spectroscopy in the two GOODS fields. Spectroscopy consists of medium-depth and deep NIRSpec/MSA spectra of 4,000 targets, covering the spectral range 0.6-5.3 $\mu$m and observed with both the low-dispersion prism (R=30-300) and all three medium-resolution gratings (R=500-1,500). We describe the observations, data reduction, sample selection, and target allocation. We measured 2,375 redshifts (2,053 from multiple emission lines); our targets span the range from z=0.5 up to z=13, including 404 at z>5. The data release includes 2-d and 1-d fully reduced spectra, with slit-loss corrections and background subtraction optimized for point sources. We also provide redshifts and S/N>5 emission-line flux catalogs for the prism and grating spectra, and concise guidelines on how to use these data products. Alongside spectroscopy, we are also publishing fully calibrated NIRCam imaging, which enables studying the JADES sample with the combined power of imaging and spectroscopy. Together, these data provide the largest statistical sample to date to characterize the properties of galaxy populations in the first billion years after the Big Bang., Comment: 41 pages, 26 figures, 10 tables. Submitted to ApJS

$\require{mediawiki-texvc}$Given the sensitivity of the resonant Lyman-$\mathrm{\alpha}$ (Ly$\mathrm{\alpha}$) transition to absorption by neutral hydrogen, observations of Ly$\mathrm{\alpha}$ emitting galaxies (LAEs) have been widely used to probe the ionising capabilities of reionisation-era galaxies and their impact on the intergalactic medium (IGM). However, prior to JWST our understanding of the contribution of fainter sources and of ionised `bubbles' at earlier stages of reionisation remained uncertain. Here, we present the characterisation of three exceptionally distant LAEs at $z>8$, newly discovered by JWST/NIRSpec in the JADES survey. These three similarly bright ($M_\text{UV} \approx -20\,\mathrm{mag}$) LAEs exhibit small Ly$\mathrm{\alpha}$ velocity offsets from the systemic redshift, $\Delta v_\mathrm{Ly\alpha} \lesssim 200\,\mathrm{km\,s^{-1}}$, yet span a range of Ly$\mathrm{\alpha}$ equivalent widths ($15\,\AA$, $31\,\AA$, and $132\,\AA$). The former two show moderate Ly$\mathrm{\alpha}$ escape fractions ($f_\mathrm{esc,Ly\alpha} \approx 10\%$), whereas Ly$\mathrm{\alpha}$ escapes remarkably efficiently from the third ($f_\mathrm{esc,Ly\alpha} \approx 72\%$), which moreover is very compact (half-light radius of $90\pm10\,\mathrm{pc}$). We find these LAEs are low-mass galaxies dominated by very recent, vigorous bursts of star formation accompanied by strong nebular emission from metal-poor gas. We infer the two LAEs with modest $f_\mathrm{esc,Ly\alpha}$, one of which reveals evidence for ionisation by an active galactic nucleus, may have reasonably produced small ionised bubbles preventing complete IGM absorption of Ly$\mathrm{\alpha}$. The third, however, requires a $\sim 3\,\text{physical Mpc}$ bubble, indicating faint galaxies have contributed significantly. The most distant LAEs thus continue to be powerful observational probes into the earlier stages of reionisation., Comment: 25 pages, 13 figures, accepted for publication in MNRAS

We describe new ultra-deep James Webb Space Telescope (JWST) NIRSpec PRISM and grating spectra for the galaxies JADES-GS-z11-0 ($z_{\mathrm{spec}} = 11.122^{+0.005}_{-0.003}$) and JADES-GS-z13-0 ($z_{\mathrm{spec}} = 13.20^{+0.03}_{-0.04}$), the most distant spectroscopically-confirmed galaxy discovered in the first year of JWST observations. The extraordinary depth of these observations (75 hours and 56 hours, respectively) provides a unique opportunity to explore the redshifts, stellar properties, UV magnitudes, and slopes for these two sources. For JADES-GS-z11-0, we find evidence for multiple emission lines, including [\ion{O}{2}]$\lambda\lambda3726,3729$\AA and [\ion{Ne}{3}$]\lambda3869$\AA, resulting in a spectroscopic redshift we determine with 94\% confidence. We present stringent upper limits on the emission line fluxes and line equivalent widths for JADES-GS-z13-0. At this spectroscopic redshift, the Lyman-$\alpha$ break in JADES-GS-z11-0 can be fit with a damped Lyman-$\alpha$ absorber with $\log{(N_\mathrm{HI}/\mathrm{cm}^{-2})} = 22.42^{+0.093}_{-0.120}$. These results demonstrate how neutral hydrogen fraction and Lyman-damping wings may impact the recovery of spectroscopic redshifts for sources like these, providing insight into the overprediction of the photometric redshifts seen for distant galaxies observed with JWST. In addition, we analyze updated NIRCam photometry to calculate the morphological properties of these resolved sources, and find a secondary source $0.3^{\prime\prime}$ south of JADES-GS-z11-0 at a similar photometric redshift, hinting at how galaxies grow through interactions in the early Universe., Comment: 34 pages, 19 figures, accepted for publication in The Astrophysical Journal (September 30, 2024)

Extreme emission line galaxies (EELGs) exhibit large equivalent widths (EW) in their rest-optical emission lines ([OIII]$\lambda5007$ or H$\alpha$ rest-frame EW$ > 750\r{A}$) which can be tied to a recent upturn in star formation rate, due to the sensitivity of the nebular line emission and the rest-optical continuum to young ($<10$Myr) and evolved stellar populations, respectively. By studying a sample of 85 star forming galaxies (SFGs), spanning the redshift and magnitude interval $3 $ M$_{UV}>-21$, in the JWST Advanced Deep Extragalactic Survey (JADES) with NIRSpec/prism spectroscopy, we determine that SFGs initiate an EELG phase when entering a significant burst of star formation, with the highest EWs observed in EELGs with the youngest luminosity-weighted ages ($<5$ Myr old) and the highest burst intensity (those with the greatest excess between their current and long-term average SFR). We spectroscopically confirm that a greater proportion of SFGs are in an EELG phase at high redshift in our UV-selected sample ($61\pm4\%$ in our $z>5.7$ high-redshift bin, compared to $23^{+4}_{-1}\%$ in our lowest-redshift bin $35.7$ have observed Lyman-$\alpha$ emission, potentially lying within large ionised regions. The high detection rate of Lyman-$\alpha$ emitters in our EELG selection suggests that the physical conditions associated with entering an EELG phase also promote the escape of Lyman-$\alpha$ photons., Comment: 34 pages, 25 figures

The morphology of a galaxy reflects the mix of physical processes occurring within and around it, offering indirect clues to its formation and evolution. We apply both visual classification and computer vision to test the suspected connection between galaxy mergers and AGN activity, as evidenced by a close/merging galaxy pair, or tidal features surrounding an apparently singular system. We use JADES JWST/NIRCam imagery of a complete, mutliwavelength AGN sample recently expanded with JWST/MIRI photometry. This 0.9-25 $\mu$m dataset enables constraints on the host galaxy morphologies of a broad range of AGN beyond z$\sim$1, including heavily obscured examples missing from previous studies. Our primary AGN sample consists of 243 lightly to highly obscured X-ray-selected AGN and 138 presumed Compton-thick, mid-infrared-bright/X-ray-faint AGN revealed by MIRI. Utilizing the shape asymmetry morphology indicator, $A_S$, as the metric for disturbance, we find that 88% of the Seyferts sampled are strongly spatially disturbed ($A_S>0.2$). The experimental design we employ reveals a $\gtrsim 3\sigma$ obscuration-merger ($N_H$-$A_S$) correlation at $0.6

We present the UV-to-NIR size evolution of a sample of 161 quiescent galaxies (QGs) with $M_*>10^{10}M_\odot$ over $0.510^{10.6}M_\odot$. To constrain the physical mechanisms driving the apparent size evolution, we study the relationship between $R_e$ and the formation redshift ($z_{form}$) of QGs. For lower-mass QGs, this relationship is broadly consistent with $R_e\sim(1+z_{form})^{-1}$, in line with the expectation of the progenitor effect. For higher-mass QGs, the relationship between $R_e$ and $z_{form}$ depends on stellar age. Older QGs have a steeper relationship between $R_e$ and $z_{form}$ than that expected from the progenitor effect alone, suggesting that mergers and/or post-quenching continuous gas accretion drive additional size growth in very massive systems. We find that the $z>3$ QGs in our sample are very compact, with mass surface densities $\Sigma_e\gtrsim10^{10} M_\odot/\rm{kpc}^2$, and their $R_e$ are possibly even smaller than anticipated from the size evolution measured for lower-redshift QGs. Finally, we take a close look at the structure of GS-9209, one of the earliest confirmed massive QGs at $z_{spec}\sim4.7$. From UV to NIR, GS-9209 becomes increasingly compact, and its light profile becomes more spheroidal, showing that the color gradient is already present in this earliest massive QG., Comment: 28 pages, 19 figures, submitted to ApJ

We present the robust selection of quiescent (QG) and post-starburst (PSB) galaxies using ultra-deep NIRCam and MIRI imaging from the JWST Advanced Deep Extragalactic Survey (JADES). Key to this is MIRI 7.7$\mu$m imaging which breaks the degeneracy between old stellar populations and dust attenuation at $33$., Comment: 27 pages, 10 figures, 2 tables (not including appendices or references). Submitted to ApJ. Comments welcome!

We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters spanning $0.4-0.9\mu\mathrm{m}$) and novel JWST images with 14 filters spanning $0.8-5\mu\mathrm{m}$, including 7 medium-band filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data at $>2.3\mu\mathrm{m}$ to construct an ultradeep image, reaching as deep as $\approx31.4$ AB mag in the stack and 30.3-31.0 AB mag ($5\sigma$, $r=0.1"$ circular aperture) in individual filters. We measure photometric redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts $z=11.5-15$. These objects show compact half-light radii of $R_{1/2}\sim50-200$pc, stellar masses of $M_{\star}\sim10^7-10^8 M_{\odot}$, and star-formation rates of $\mathrm{SFR}\sim0.1-1\,M_{\odot}\,\mathrm{yr}^{-1}$. Our search finds no candidates at $15

We present the identification of 42 narrow-line active galactic nuclei (type-2 AGN) candidates in the two deepest observations of the JADES spectroscopic survey with JWST/NIRSpec. The spectral coverage and the depth of our observations allow us to select narrow-line AGNs based on both rest-frame optical and UV emission lines up to z=10. Due to the metallicity decrease of galaxies, at $z>3$ the standard optical diagnostic diagrams (N2-BPT or S2-VO87) become unable to distinguish many AGN from other sources of photoionisation. Therefore, we also use high ionisation lines, such as HeII$\lambda$4686, HeII$\lambda$1640, NeIV$\lambda$2422, NeV$\lambda$3420, and NV$\lambda$1240, also in combination with other UV transitions, to trace the presence of AGN. Out of a parent sample of 209 galaxies, we identify 42 type-2 AGN (although 10 of them are tentative), giving a fraction of galaxies in JADES hosting type-2 AGN of about $20\pm3$\%, which does not evolve significantly in the redshift range between 2 and 10. The selected type-2 AGN have estimated bolometric luminosities of $10^{41.3-44.9}$ erg s$^{-1}$ and host-galaxy stellar masses of $10^{7.2-9.3}$ M$_{\odot}$. The star formation rates of the selected AGN host galaxies are consistent with those of the star-forming main sequence. The AGN host galaxies at z=4-6 contribute $\sim$8-30 \% to the UV luminosity function, slightly increasing with UV luminosity., Comment: 23 pages 13 figures

Using deep JWST imaging from JADES, JEMS and SMILES, we characterize optically-faint and extremely red galaxies at $z>3$ that were previously missing from galaxy census estimates. The data indicate the existence of abundant, dusty and post-starburst-like galaxies down to $10^8$M$_\odot$, below the sensitivity limit of Spitzer and ALMA. Modeling the NIRCam and HST photometry of these red sources can result in extreme, high values for both stellar mass and star formation rate (SFR); however, including 7 MIRI filters out to 21$\mu$m results in decreased mass (median 0.6 dex for log$_{10}$M$^*$/M$_{\odot}>$10), and SFR (median 10$\times$ for SFR$>$100 M$_{\odot}$/yr). At $z>6$, our sample includes a high fraction of little red dots (LRDs; NIRCam-selected dust-reddened AGN candidates). We significantly measure older stellar populations in the LRDs out to rest-frame 3$\mu$m (the stellar bump) and rule out a dominant contribution from hot dust emission, a signature of AGN contamination to stellar population measurements. This allows us to measure their contribution to the cosmic census at $z>3$, below the typical detection limits of ALMA ($L_{\rm IR}<10^{12}L_\odot$). We find that these sources, which are overwhelmingly missed by HST and ALMA, could effectively double the obscured fraction of the star formation rate density at $4

The detection of numerous and relatively bright galaxies at redshifts z > 9 has prompted new investigations into the star-forming properties of high-redshift galaxies. Using local forms of the initial mass function (IMF) to estimate stellar masses of these galaxies from their light output leads to galaxy masses that are at the limit allowed for the state of the LambdaCDM Universe at their redshift. We explore how varying the IMF assumed in studies of galaxies in the early universe changes the inferred values for the stellar masses of these galaxies. We infer galaxy properties with the SED fitting code Prospector using varying IMF parameterizations for a sample of 102 galaxies from the JWST Advanced Deep Extragalactic Survey (JADES) spectroscopically confirmed to be at z > 6.7, with additional photometry from the JWST Extragalactic Medium Band Survey (JEMS) for twenty-one galaxies. We demonstrate that models with stellar masses reduced by a factor of three or more do not affect the modeled spectral energy distribution (SED)., Comment: The Significance statement is required for PNAS submission

We summarize the properties and initial data release of the JADES Origins Field (JOF), which will soon be the deepest imaging field yet observed with the James Webb Space Telescope (JWST). This field falls within the GOODS-S region about 8' south-west of the Hubble Ultra Deep Field (HUDF), where it was formed initially in Cycle 1 as a parallel field of HUDF spectroscopic observations within the JWST Advanced Deep Extragalactic Survey (JADES). This imaging will be greatly extended in Cycle 2 program 3215, which will observe the JOF for 5 days in six medium-band filters, seeking robust candidates for z>15 galaxies. This program will also include ultra-deep parallel NIRSpec spectroscopy (up to 104 hours on-source, summing over the dispersion modes) on the HUDF. Cycle 3 observations from program 4540 will add 20 hours of NIRCam slitless spectroscopy to the JOF. With these three campaigns, the JOF will be observed for 380 open-shutter hours with NIRCam using 15 imaging filters and 2 grism bandpasses. Further, parts of the JOF have deep 43 hr MIRI observations in F770W. Taken together, the JOF will soon be one of the most compelling deep fields available with JWST and a powerful window into the early Universe. This paper presents the second data release from JADES, featuring the imaging and catalogs from the year 1 JOF observations., Comment: Submitted to ApJ Supplement. Images and catalogs are available at https://archive.stsci.edu/hlsp/jades . A FITSmap portal to view the images is at https://jades.idies.jhu.edu

A full intrinsic quadric is a normal complete variety with a finitely generated Cox ring defined by a single quadratic relation of full rank. We describe all surfaces of this type explicitly via local Gorenstein indices. As applications, we present upper and lower bounds in terms of the Gorenstein index for the degree, the log canonicity and the Picard index. Moreover, we determine all full intrinsic quadric surfaces admitting a K\"ahler-Einstein metric., Comment: 23 pages

We study galaxies in JADES Deep to study the evolution of the ionising photon production efficiency, $\xi_{\rm{ion}}$, observed to increase with redshift. We estimate $\xi_{\rm{ion}}$ for a sample of 677 galaxies at $z \sim 4 - 9$ using NIRCam photometry. Specifically, combinations of the medium and wide bands F335M-F356W and F410M-F444W to constrain emission lines that trace $\xi_{\rm{ion}}$: H$\alpha$ and [OIII]. Additionally, we use the spectral energy distribution fitting code \texttt{Prospector} to fit all available photometry and infer galaxy properties. The flux measurements obtained via photometry are consistent with FRESCO and NIRSpec-derived fluxes. Moreover, the emission-line-inferred measurements are in tight agreement with the \texttt{Prospector} estimates. We also confirm the observed $\xi_{\rm{ion}}$ trend with redshift and M$_{\rm{UV}}$, and find: $\log \xi_{\rm{ion}} (z,\text{M}_{\rm{UV}}) = (0.05 \pm 0.02)z + (0.11 \pm 0.02) \text{M}_{\rm{UV}} + (27.33 \pm 0.37)$. We use \texttt{Prospector} to investigate correlations of $\xi_{\rm{ion}}$ with other galaxy properties. We see a clear correlation between $\xi_{\rm{ion}}$ and burstiness in the star formation history of galaxies, given by the ratio of recent to older star formation, where burstiness is more prevalent at lower stellar masses. We also convolve our $\xi_{\rm{ion}}$ relations with luminosity functions from the literature, and constant escape fractions of 10 and 20\%, to place constraints on the cosmic ionising photon budget. By combining our results, we find that if our sample is representative of the faint low-mass galaxy population, galaxies with bursty star formation are efficient enough in producing ionising photons and could be responsible for the reionisation of the Universe., Comment: Submitted to MNRAS. 19 pages, 14 figures

By combining the JWST/NIRCam JADES and CEERS extragalactic datasets, we have uncovered a sample of twenty-one T and Y brown dwarf candidates at best-fit distances between 0.1 - 4.2 kpc. These sources were selected by targeting the blue 1$\mu$m - 2.5$\mu$m colors and red 3$\mu$m - 4.5$\mu$m colors that arise from molecular absorption in the atmospheres of T$_{\mathrm{eff}} < $ 1300K brown dwarfs. We fit these sources using multiple models of low-mass stellar atmospheres and present the resulting fluxes, sizes, effective temperatures and other derived properties for the sample. If confirmed, these fits place the majority of the sources in the Milky Way thick disk and halo. We observe proper motion for seven of the candidate brown dwarfs with directions in agreement with the plane of our galaxy, providing evidence that they are not extragalactic in nature. We demonstrate how the colors of these sources differ from selected high-redshift galaxies, and explore the selection of these sources in planned large-area JWST NIRCam surveys. Deep imaging with JWST/NIRCam presents an an excellent opportunity for finding and understanding these very cold low-mass stars at kpc distances., Comment: 22 pages, 9 figures, accepted by ApJ (January 18, 2024)

We explore the kinematic gas properties of six $5.51$ thus far. The cold gas masses implied by the observed star formation rates are $\sim 10\times$ larger than the stellar masses. We find that their ionised gas is spatially resolved by JWST, with evidence for broadened lines and spatial velocity gradients. Using a simple thin-disc model, we fit these data with a novel forward modelling software that accounts for the complex geometry, point spread function, and pixellation of the NIRSpec instrument. We find the sample to include both rotation- and dispersion-dominated structures, as we detect velocity gradients of $v(r_{\rm e})\approx100-150\,{\rm km\,s^{-1}}$, and find velocity dispersions of $\sigma_0\approx 30-70\,{\rm km\,s^{-1}}$ that are comparable to those at cosmic noon. The dynamical masses implied by these models ($M_{\rm dyn}\sim10^{9-10}\,{\rm M_\odot}$) are larger than the stellar masses by up to a factor 40, and larger than the total baryonic mass (gas + stars) by a factor of $\sim 3$. Qualitatively, this result is robust even if the observed velocity gradients reflect ongoing mergers rather than rotating discs. Unless the observed emission line kinematics is dominated by outflows, this implies that the centres of these galaxies are dark-matter dominated or that star formation is $3\times$ less efficient, leading to higher inferred gas masses., Comment: Accepted for publication in A&A. Software for JWST/NIRSpec MSA modelling (slit losses, 1D LSFs and 2D model fitting) publicly available at https://github.com/annadeg/jwst-msafit

We investigate the incidence and properties of ionized gas outflows in a sample of 52 galaxies with stellar mass between $10^7$ M$_{\odot}$ and $10^9$ M$_{\odot}$ observed with ultra-deep JWST/NIRSpec MSA spectroscopy as part of the JWST Advanced Deep Extragalactic Survey (JADES). The high-spectral resolution (R2700) NIRSpec observations allowed us to identify for the first time the signature of outflows in the rest-frame optical nebular lines in low-mass galaxies at $z>3$. The incidence fraction of ionized outflows, traced by broad components, is about 25-40$\%$ depending on the intensity of the emission lines. The low incidence fraction might be due to both the sensitivity limit and the fact that outflows are not isotropic but have a limited opening angle which results in a detection only when this is directed toward our line of sight. Evidence for outflows increases slightly with stellar mass and star-formation rate. The median velocity and mass loading factor (i.e., the ratio between mass outflow rate and star formation rate) of the outflowing ionized gas are 350 km s$^{-1}$ and $\eta=2.0^{+1.6}_{-1.5}$, respectively. These are 1.5 and 100 times higher, respectively than the typical values observed in local dwarf galaxies. These outflows are able to escape the gravitational potential of the galaxy and enrich the circum-galactic medium and, potentially, the inter-galactic medium. Our results indicate that outflows can significantly impact the star formation activity in low-mass galaxies within the first 2 Gyr of the Universe., Comment: 16 pages, 3 tables

We consider two classes of non-toric log del Pezzo $\mathbb{C}^*$-surfaces: on the one side the 1/3-log canonical ones and on the other side those of Picard number one and Gorenstein index at most 65. In each of the two classes we figure out the surfaces admitting a K\"ahler-Einstein metric, a K\"ahler-Ricci soliton and those allowing a Sasaki-Einstein metric on the link of their anticanonical cone. We encounter examples that admit a K\"{a}hler-Ricci soliton but no Sasaki-Einstein cone link metric., Comment: 27 pages

We present 10 novel [OIII]$\lambda 4363$ auroral line detections up to $z\sim 9.5$ measured from ultra-deep JWST/NIRSpec MSA spectroscopy from the JWST Advanced Deep Extragalactic Survey (JADES). We leverage the deepest spectroscopic observations yet taken with NIRSpec to determine electron temperatures and oxygen abundances using the direct T$_e$ method. We directly compare against a suite of locally calibrated strong-line diagnostics and recent high-$z$ calibrations. We find the calibrations fail to simultaneously match our JADES sample, thus warranting a self-consistent revision of these calibrations for the high-$z$ Universe. We find weak dependence between R2 and O3O2 with metallicity, thus suggesting these line-ratios are ineffective in the high-$z$ Universe as metallicity diagnostics and degeneracy breakers. We find R3 and R23 still correlate with metallicity, but we find tentative flattening of these diagnostics, thus suggesting future difficulties when applying these strong-line ratios as metallicity indicators in the high-$z$ Universe. We also propose and test an alternative diagnostic based on a different combination of R3 and R2 with a higher dynamic range. We find a reasonably good agreement (median offset of 0.002 dex, median absolute offset of 0.13 dex) with the JWST sample at low metallicity. Our sample demonstrates higher ionization/excitation ratios than local galaxies with rest-frame EWs(H$\beta$) $\approx 200 -300$ Angstroms. However, we find the median rest-frame EWs(H$\beta$) of our sample to be $\sim 2\text{x}$ less than the galaxies used for the local calibrations. This EW discrepancy combined with the high ionization of our galaxies does not present a clear description of [OIII]$\lambda 4363$ production in the high-$z$ Universe, thus warranting a much deeper examination into the factors affecting production., Comment: 28 pages, 13 figures

The physical processes that establish the morphological evolution and the structural diversity of galaxies are key unknowns in extragalactic astrophysics. Here we report the finding of the morphologically-mature galaxy JADES-GS+53.18343-27.79097, which existed within the first 700 million years of the Universe's history. This star-forming galaxy with a stellar mass of 400 million solar masses consists of three components, a highly-compact core with a half-light radius of less than 100 pc, an actively star-forming disc with a radius of about 400 pc, and a star-forming clump, which all show distinctive star-formation histories. The central stellar mass density of this galaxy is within a factor of two of the most massive present-day ellipticals, while being globally 1000 times less massive. The radial profile of the specific star-formation rate is rising toward the outskirts. This evidence suggests the first detection of inside-out growth of a galaxy as a proto-bulge and a star-forming disc in the Epoch of Reionization., Comment: 42 pages, 17 figures

The rest-frame UV recombination emission line Ly$\alpha$ can be powered by ionising photons from young massive stars in star forming galaxies, but its ability to be resonantly scattered by neutral gas complicates its interpretation. For reionization era galaxies, a neutral intergalactic medium (IGM) will scatter Ly$\alpha$ from the line of sight, making Ly$\alpha$ a useful probe of the neutral fraction evolution. Here, we explore Ly$\alpha$ in JWST/NIRSpec spectra from the ongoing JADES programme, which targets hundreds of galaxies in the well-studied GOODS-S and GOODS-N fields. These sources are UV-faint ($-20.4<\rm M_{\rm UV}<-16.4$), and thus represent a poorly-explored class of galaxies. The low spectral resolution ($R\sim100$) spectra of a subset of 84 galaxies in GOODS-S with $z_{spec}>5.6$ (as derived with optical lines) are fit with line and continuum models, in order to search for significant line emission. Through exploration of the R100 data, we find evidence for Ly$\alpha$ in 17 sources. This sample allows us to place observational constraints on the fraction of galaxies with Ly$\alpha$ emission in the redshift range $5.6

We use SEDz* -- a code designed to chart star formation histories (SFHs) of 6

We present a catalog of 717 candidate galaxies at $z > 8$ selected from 125 square arcminutes of NIRCam imaging as part of the JWST Advanced Deep Extragalactic Survey (JADES). We combine the full JADES imaging dataset with data from the JEMS and FRESCO JWST surveys along with extremely deep existing observations from HST/ACS for a final filter set that includes fifteen JWST/NIRCam filters and five HST/ACS filters. The high-redshift galaxy candidates were selected from their estimated photometric redshifts calculated using a template fitting approach, followed by visual inspection from seven independent reviewers. We explore these candidates in detail, highlighting interesting resolved or extended sources, sources with very red long-wavelength slopes, and our highest redshift candidates, which extend to $z_{phot} = 18$. We also investigate potential contamination by stellar objects, and do not find strong evidence from SED fitting that these faint high-redshift galaxy candidates are low-mass stars. Over 93\% of the sources are newly identified from our deep JADES imaging, including 31 new galaxy candidates at $z_{phot} > 12$. Using 42 sources in our sample with measured spectroscopic redshifts from NIRSpec and FRESCO, we find excellent agreement to our photometric redshift estimates, with no catastrophic outliers and an average difference of $\langle \Delta z = z_{phot}- z_{spec} \rangle= 0.26$. These sources comprise one of the most robust samples for probing the early buildup of galaxies within the first few hundred million years of the Universe's history., Comment: v2: 43 pages, 20 figures, accepted by The Astrophysical Journal, full online data catalog found at https://doi.org/10.5281/zenodo.7996499

We describe the NIRSpec component of the JWST Deep Extragalactic Survey (JADES), and provide deep spectroscopy of 253 sources targeted with the NIRSpec micro-shutter assembly in the Hubble Ultra Deep Field and surrounding GOODS-South. The multi-object spectra presented here are the deepest so far obtained with JWST, amounting to up to 28 hours in the low-dispersion ($R\sim 30-300$) prism, and up to 7 hours in each of the three medium-resolution $R\approx 1000$ gratings and one high-dispersion grating, G395H ($R\approx2700$). Our low-dispersion and medium-dispersion spectra cover the wavelength range $0.6-5.3\mu$m. We describe the selection of the spectroscopic targets, the strategy for the allocation of targets to micro-shutters, and the design of the observations. We present the public release of the reduced 2D and 1D spectra, and a description of the reduction and calibration process. We measure spectroscopic redshifts for 178 of the objects targeted extending up to $z=13.2$. We present a catalog of all emission lines detected at $S/N>5$, and our redshift determinations for the targets. Combined with the first JADES NIRCam data release, these public JADES spectroscopic and imaging datasets provide a new foundation for discoveries of the infrared universe by the worldwide scientific community., Comment: Accepted for publication in A&A. Data products available from https://archive.stsci.edu/hlsp/jades

We present an overview of the James Webb Space Telescope (JWST) Advanced Deep Extragalactic Survey (JADES), an ambitious program of infrared imaging and spectroscopy in the GOODS-S and GOODS-N deep fields, designed to study galaxy evolution from high redshift to cosmic noon. JADES uses about 770 hours of Cycle 1 guaranteed time largely from the Near-Infrared Camera (NIRCam) and Near-Infrared Spectrograph (NIRSpec) instrument teams. In GOODS-S, in and around the Hubble Ultra Deep Field and Chandra Deep Field South, JADES produces a deep imaging region of ~45 arcmin$^2$ with an average of 130 hrs of exposure time spread over 9 NIRCam filters. This is extended at medium depth in GOODS-S and GOODS-N with NIRCam imaging of ~175 arcmin$^2$ with an average exposure time of 20 hrs spread over 8-10 filters. In both fields, we conduct extensive NIRSpec multi-object spectroscopy, including 2 deep pointings of 55 hrs exposure time, 14 medium pointings of ~12 hrs, and 15 shallower pointings of ~4 hrs, targeting over 5000 HST and JWST-detected faint sources with 5 low, medium, and high-resolution dispersers covering 0.6-5.3 microns. Finally, JADES extends redward via coordinated parallels with the JWST Mid-Infrared Instrument (MIRI), featuring ~9 arcmin$^2$ with 43 hours of exposure at 7.7 microns and twice that area with 2-6.5 hours of exposure at 12.8 microns For nearly 30 years, the GOODS-S and GOODS-N fields have been developed as the premier deep fields on the sky; JADES is now providing a compelling start on the JWST legacy in these fields., Comment: 33 pages, submitted to ApJ Supplement. The JADES Collaboration web site is at https://jades-survey.github.io, and the initial data release is available at https://archive.stsci.edu/hlsp/jades with a viewer at http://jades.idies.jhu.edu

We present a spatially resolved study of stellar populations in 6 galaxies with stellar masses $M_*\sim10^{10}M_\odot$ at $z\sim3.7$ using 14-filter JWST/NIRCam imaging from the JADES and JEMS surveys. The 6 galaxies are visually selected to have clumpy substructures with distinct colors over rest-frame $3600-4100\r{A}$, including a red, dominant stellar core that is close to their stellar-light centroids. With 23-filter photometry from HST to JWST, we measure the stellar-population properties of individual structural components via SED fitting using Prospector. We find that the central stellar cores are $\gtrsim2$ times more massive than the Toomre mass, indicating they may not form via single in-situ fragmentation. The stellar cores have stellar ages of $0.4-0.7$ Gyr that are similar to the timescale of clump inward migration due to dynamical friction, suggesting that they likely instead formed through the coalescence of giant stellar clumps. While they have not yet quenched, the 6 galaxies are below the star-forming main sequence by $0.2-0.7$ dex. Within each galaxy, we find that the specific star formation rate is lower in the central stellar core, and the stellar-mass surface density of the core is already similar to quenched galaxies of the same masses and redshifts. Meanwhile, the stellar ages of the cores are either comparable to or younger than the extended, smooth parts of the galaxies. Our findings are consistent with model predictions of the gas-rich compaction scenario for the buildup of galaxies' central regions at high redshifts. We are likely witnessing the coeval formation of dense central cores, along with the onset of galaxy-wide quenching at $z>3$., Comment: 34 pages, 18 figures, ApJ in press

We analyse the gas-phase metallicity properties of a sample of low stellar mass (log M*/M_sun <= 9) galaxies at 3 < z < 10, observed with JWST/NIRSpec as part of the JADES programme in its deep GOODS-S tier. By combining this sample with more massive galaxies at similar redshifts from other programmes, we study the scaling relations between stellar mass, oxygen abundance (O/H), and star-formation rate (SFR) for 146 galaxies, spanning across three orders of magnitude in stellar mass and out to the epoch of early galaxy assembly. We find evidence for a shallower slope at the low-mass-end of the mass-metallicity relation (MZR), with 12 + log(O/H) = (7.72+-0.02) + (0.17+-0.03) log(M* / 10^8 M_sun), in good agreement with the MZR probed by local analogues of high-redshift systems like 'Green Pea' and 'Blueberry' galaxies. The inferred slope is well matched by models including 'momentum-driven' SNe winds, suggesting that feedback mechanisms in dwarf galaxies (and at high-z) might be different from those in place at higher masses. The evolution in the normalisation is observed to be relatively mild compared to previous determinations of the MZR at z~3 (~ 0.1 - 0.2 dex across the explored mass regime). We observe a deviation from the local fundamental metallicity relation (FMR) for our sample at high redshift, especially at z > 6, with galaxies significantly less enriched (with a median offset in log(O/H) of ~ 0.5 dex, significant at ~ 5 sigma) than predicted given their M* and SFR. These observations are consistent with an enhanced stochasticity in the star-formation history, and/or with an increased efficiency in metal removals by outflows, prompting us to reconsider the nature of the relationship between M*, O/H, and SFR in the early Universe., Comment: Re-submitted to A&A after revision

Interactions between galaxies leave distinguishable imprints in the form of tidal features which hold important clues about their mass assembly. Unfortunately, these structures are difficult to detect because they are low surface brightness features so deep observations are needed. Upcoming surveys promise several orders of magnitude increase in depth and sky coverage, for which automated methods for tidal feature detection will become mandatory. We test the ability of a convolutional neural network to reproduce human visual classifications for tidal detections. We use as training $\sim$6000 simulated images classified by professional astronomers. The mock Hyper Suprime Cam Subaru (HSC) images include variations with redshift, projection angle and surface brightness ($\mu_{lim}$ =26-35 mag arcsec$^{-2}$). We obtain satisfactory results with accuracy, precision and recall values of Acc=0.84, P=0.72 and R=0.85, respectively, for the test sample. While the accuracy and precision values are roughly constant for all surface brightness, the recall (completeness) is significantly affected by image depth. The recovery rate shows strong dependence on the type of tidal features: we recover all the images showing shell features and 87% of the tidal streams; these fractions are below 75% for mergers, tidal tails and bridges. When applied to real HSC images, the performance of the model worsens significantly. We speculate that this is due to the lack of realism of the simulations and take it as a warning on applying deep learning models to different data domains without prior testing on the actual data., Comment: 13 pages, 10 figures, accepted for publication in MNRAS

Local and low-redshift ($z$<$3$) galaxies are known to broadly follow a bimodal distribution: actively star forming galaxies with relatively stable star-formation rates, and passive systems. These two populations are connected by galaxies in relatively slow transition. In contrast, theory predicts that star formation was stochastic at early cosmic times and in low-mass systems: these galaxies transitioned rapidly between starburst episodes and phases of suppressed star formation, potentially even causing temporary quiescence -- so-called mini-quenching events. However, the regime of star-formation burstiness is observationally highly unconstrained. Directly observing mini-quenched galaxies in the primordial Universe is therefore of utmost importance to constrain models of galaxy formation and transformation. Early quenched galaxies have been identified out to redshift $z<5$, and these are all found to be massive ($M_{*}>10^{10}~M_{\odot}$) and relatively old. Here we report a (mini-)quenched galaxy at z$=$7.3, when the Universe was only 700~Myr old. The JWST/NIRSpec spectrum is very blue ($U$-$V$$=$0.16$\pm0.03$~mag), but exhibits a Balmer break and no nebular emission lines. The galaxy experienced a short starburst followed by rapid quenching; its stellar mass (4-6$\times 10^8~M_\odot$) falls in a range that is sensitive to various feedback mechanisms, which can result in perhaps only temporary quenching., Comment: Accepted for publication in Nature

We report the discovery of a remarkable Ly$\alpha$ emitting galaxy at z = 7.2782, JADES-GS-z7-LA, with EW$_0$(Ly$\alpha$) $= 388.0 \pm 88.8$\AA and UV magnitude -17.0. The spectroscopic redshift is confirmed via rest-frame optical lines [O II], H$\beta$ and [O III] in its JWST/NIRSpec Micro-Shutter Assembly (MSA) spectrum. The Ly$\alpha$ line is detected in both lower resolution PRISM as well as medium resolution G140M grating spectra. The LSF-deconvolved Ly$\alpha$ FWHM in the grating is $383.9 \pm 56.2$ km/s and the Ly$\alpha$ velocity offset compared to the systemic redshift is $113.3 \pm 80.0$ km/s, indicative of very little neutral gas or dust within the galaxy. We estimate the Ly$\alpha$ escape fraction to be >70%. JADES-GS-z7-LA has a O32 ratio of $11.1 \pm 2.2$ and a R23 ratio of $11.2 \pm 2.6$, consistent with low metallicity and high ionization parameters. Deep NIRCam imaging also revealed a close companion source (separated by 0.23"), which exhibits similar photometry to that of JADES-GS-z7-LA, with a photometric excess in the F410M NIRCam image consistent with [O III]+H$\beta$ emission at the same redshift. The spectral energy distribution of JADES-GS-z7-LA indicates a "bursty" star formation history, with a low stellar mass of $\approx 10^7$ $M_\odot$. Assuming that the Ly$\alpha$ transmission through the intergalactic medium is the same as its measured escape fraction, an ionized region of size > 1.5 pMpc is needed to explain the high Ly$\alpha$ EW and low velocity offset compared to systemic seen in JADES-GS-z7-LA. Owing to its UV-faintness, we show that it is incapable of single-handedly ionizing a region large enough to explain its Ly$\alpha$ emission. Therefore, we suggest that JADES-GS-z7-LA (and possibly the companion source) may be a part of a larger overdensity, presenting direct evidence of overlapping ionized bubbles at $z>7$., Comment: 14 pages, 8 figures, Accepted for publication in A&A

We report the discovery of an extreme galaxy overdensity at $z = 5.4$ in the GOODS-S field using JWST/NIRCam imaging from JADES and JEMS alongside JWST/NIRCam wide field slitless spectroscopy from FRESCO. We identified potential members of the overdensity using HST+JWST photometry spanning $\lambda = 0.4-5.0\ \mu\mathrm{m}$. These data provide accurate and well-constrained photometric redshifts down to $m \approx 29-30\,\mathrm{mag}$. We subsequently confirmed $N = 81$ galaxies at $5.2 < z < 5.5$ using JWST slitless spectroscopy over $\lambda = 3.9-5.0\ \mu\mathrm{m}$ through a targeted line search for $\mathrm{H} \alpha$ around the best-fit photometric redshift. We verified that $N = 42$ of these galaxies reside in the field while $N = 39$ galaxies reside in a density around $\sim 10$ times that of a random volume. Stellar populations for these galaxies were inferred from the photometry and used to construct the star-forming main sequence, where protocluster members appeared more massive and exhibited earlier star formation (and thus older stellar populations) when compared to their field galaxy counterparts. We estimate the total halo mass of this large-scale structure to be $12.6 \lesssim \mathrm{log}_{10} \left( M_{\mathrm{halo}}/M_{\odot} \right) \lesssim 12.8$ using an empirical stellar mass to halo mass relation, which is likely an underestimate as a result of incompleteness. Our discovery demonstrates the power of JWST at constraining dark matter halo assembly and galaxy formation at very early cosmic times., Comment: Resubmitted to ApJ based on reviewer report; main text has 15 pages, 6 figures and 1 table; appendix has 1 page, 2 figure sets, and 2 tables

We present JADES JWST/NIRSpec spectroscopy of GN-z11, the most luminous candidate $z>10$ Lyman break galaxy in the GOODS-North field with $M_{UV}=-21.5$. We derive a redshift of $z=10.603$ (lower than previous determinations) based on multiple emission lines in our low and medium resolution spectra over $0.8-5.3 \mu$m. We significantly detect the continuum and measure a blue rest-UV spectral slope of $\beta=-2.4$. Remarkably, we see spatially-extended Lyman-$\alpha$ in emission (despite the highly-neutral IGM expected at this early epoch), offset 555 km s$^{-1}$ redward of the systemic redshift. From our measurements of collisionally-excited lines of both low- and high-ionization (including [O II]$\lambda3727$, [Ne III]$\lambda 3869$ and C III]$\lambda1909$) we infer a high ionization parameter ($\log U\sim -2$). We detect the rarely-seen N IV]$\lambda1486$ and N III]$\lambda1748$ lines in both our low and medium resolution spectra, with other high ionization lines seen in the low resolution spectrum such as He II (blended with O III]) and C IV (with a possible P-Cygni profile). Based on the observed rest-UV line ratios, we cannot conclusively rule out photoionization from AGN, although the high C III]/He II and N III]/He II ratios are compatible with a star-formation explanation. If the observed emission lines are powered by star formation, then the strong N III]$\lambda1748$ observed may imply an unusually high $N/O$ abundance. Balmer emission lines (H$\gamma$, H$\delta$) are also detected, and if powered by star formation rather than an AGN we infer a star formation rate of $\sim 20-30 M_{\odot} yr^{-1}$ (depending on the IMF) and low dust attenuation. Our NIRSpec spectroscopy confirms that GN-z11 is a remarkable galaxy with extreme properties seen 430 Myr after the Big Bang., Comment: Accepted for publication in Astronomy & Astrophysics, 17 pages, 12 figures. Line fluxes updated

We present JWST NIRCam 9-band near-infrared imaging of the luminous $z=10.6$ galaxy GN-z11 from the JWST Advanced Deep Extragalactic Survey (JADES) of the GOODS-N field. We find a spectral energy distribution (SED) entirely consistent with the expected form of a high-redshift galaxy: a clear blue continuum from 1.5 to 4 microns with a complete dropout in F115W. The core of GN-z11 is extremely compact in JWST imaging. We analyze the image with a two-component model, using a point source and a S\'{e}rsic profile that fits to a half-light radius of 200 pc and an index $n=0.9$. We find a low-surface brightness haze about $0.4''$ to the northeast of the galaxy, which is most likely a foreground object but might be a more extended component of GN-z11. At a spectroscopic redshift of 10.60 (Bunker et al. 2023), the comparison of the NIRCam F410M and F444W images spans the Balmer jump. From population synthesis modeling, here assuming no light from an active galactic nucleus, we reproduce the SED of GN-z11, finding a stellar mass of $\sim$$10^{9}~M_{\odot}$, a star-formation rate of $\sim$$20~M_{\odot}~\mathrm{yr}^{-1}$ and a young stellar age of $\sim$$20~\mathrm{Myr}$. As massive galaxies at high redshift are likely to be highly clustered, we search for faint neighbors of GN-z11, finding 9 galaxies out to $\sim$5 comoving Mpc transverse with photometric redshifts consistent with $z=10.6$, and a 10$^{\rm th}$ more tentative dropout only $3''$ away. This is consistent with GN-z11 being hosted by a massive dark-matter halo ($\approx8\times10^{10}~M_{\odot}$), though lower halo masses cannot be ruled out., Comment: 18 pages, 8 figures, accepted for publication in ApJ

We consider log del Pezzo surfaces coming with a non-trivial torus action. Such a surface is 1/k-log canonical if it allows a resolution of singularities with discrepanies all greater or equal to 1/k-1. We provide a concrete classification algorithm for fixed k and give explicit results for k=1, 2 and 3. This comprises in particular the cases of Gorenstein index 1, 2 and 3., Comment: 57 pages

Finding and characterising the first galaxies that illuminated the early Universe at cosmic dawn is pivotal to understand the physical conditions and the processes that led to the formation of the first stars. In the first few months of operations, imaging from the James Webb Space Telescope (JWST) have been used to identify tens of candidates of galaxies at redshift (z) greater than 10, less than 450 million years after the Big Bang. However, none of these candidates has yet been confirmed spectroscopically, leaving open the possibility that they are actually low-redshift interlopers. Here we present spectroscopic confirmation and analysis of four galaxies unambiguously detected at redshift 10.3