73 results on '"Harrison OJ"'
Search Results
2. A conserved population of MHC II-restricted, innate-like, commensal-reactive T cells in the gut of humans and mice
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Hackstein, C-P, Costigan, D, Drexhage, L, Pearson, C, Bullers, S, Ilott, N, Akther, HD, Gu, Y, FitzPatrick, MEB, Harrison, OJ, Garner, LC, Mann, EH, Pandey, S, Friedrich, M, Provine, NM, Uhlig, HH, Marchi, E, Powrie, F, Klenerman, P, and Thornton, EE
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Coleoptera ,Mice ,Multidisciplinary ,Humans ,Animals ,Cytokines ,General Physics and Astronomy ,Lymphocyte Count ,General Chemistry ,Colitis ,Immunologic Surveillance ,General Biochemistry, Genetics and Molecular Biology - Abstract
Interactions with commensal microbes shape host immunity on multiple levels and are recognized to play a pivotal role in human health and disease. In this study, we show that MHC-II restricted, commensal-reactive T cells in the colon of both humans and mice acquire transcriptional and functional characteristics typically associated with innate-like T cells, including the expression of the key transcription factor PLZF and the ability to respond to cytokines including IL-12, IL-18 and IL-23 in a TCR-independent manner. These MHC-II restricted, innate-like, commensal-reactive T cells (TMIC) are endowed with a polyfunctional effector potential spanning classic Th1- and Th17-cytokines, cytotoxic molecules as well as regulators of epithelial homeostasis and represent an abundant and conserved cell population in the human and murine colon. T cells with the TMIC phenotype were increased in ulcerative colitis patients and their presence aggravated pathology in DSS-treated mice, pointing towards a pathogenic role in colitis. Our findings add TMIC cells to the expanding spectrum of innate-like immune cells positioned at the frontline of intestinal immune surveillance, capable of acting as sentinels of microbes and the local cytokine milieu.
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- 2022
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3. Antigen-level resolution of commensal-specific B cell responses can be enabled by phage display screening coupled with B cell tetramers.
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Verma S, Dufort MJ, Olsen TM, Kimmel S, Labuda JC, Scharffenberger S, McGuire AT, and Harrison OJ
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- Animals, Mice, Mice, Inbred C57BL, Peyer's Patches immunology, Lymphocyte Activation immunology, Antigens, Bacterial immunology, Somatic Hypermutation, Immunoglobulin, Peptide Library, Lymph Nodes immunology, Cell Surface Display Techniques, Symbiosis immunology, Immunoglobulin G immunology, Immunoglobulin A immunology, B-Lymphocytes immunology
- Abstract
Induction of commensal-specific immunity contributes to tissue homeostasis, yet the mechanisms underlying induction of commensal-specific B cells remain poorly understood in part due to a lack of tools to identify these cells. Using phage display, we identified segmented filamentous bacteria (SFB) antigens targeted by serum and intestinal antibodies and generated B cell tetramers to track SFB-specific B cells in gut-associated lymphoid tissues. We revealed a compartmentalized response in SFB-specific B cell activation, with a gradient of immunoglobulin A (IgA), IgG1, and IgG2b isotype production along Peyer's patches contrasted by selective production of IgG2b within mesenteric lymph nodes. V(D)J sequencing and monoclonal antibody generation identified somatic hypermutation driven affinity maturation to SFB antigens under homeostatic conditions. Combining phage display and B cell tetramers will enable investigation of the ontogeny and function of commensal-specific B cell responses in tissue immunity, inflammation, and repair., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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4. The neuroimmune CGRP-RAMP1 axis tunes cutaneous adaptive immunity to the microbiota.
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Kulalert W, Wells AC, Link VM, Lim AI, Bouladoux N, Nagai M, Harrison OJ, Kamenyeva O, Kabat J, Enamorado M, Chiu IM, and Belkaid Y
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- Receptor Activity-Modifying Protein 1 genetics, Receptors, Calcitonin Gene-Related Peptide, Adaptive Immunity, Calcitonin Gene-Related Peptide genetics, Neuroimmunomodulation
- Abstract
The somatosensory nervous system surveils external stimuli at barrier tissues, regulating innate immune cells under infection and inflammation. The roles of sensory neurons in controlling the adaptive immune system, and more specifically immunity to the microbiota, however, remain elusive. Here, we identified a mechanism for direct neuroimmune communication between commensal-specific T lymphocytes and somatosensory neurons mediated by the neuropeptide calcitonin gene-related peptide (CGRP) in the skin. Intravital imaging revealed that commensal-specific T cells are in close proximity to cutaneous nerve fibers in vivo. Correspondingly, we observed upregulation of the receptor for the neuropeptide CGRP, RAMP1, in CD8
+ T lymphocytes induced by skin commensal colonization. The neuroimmune CGRP-RAMP1 signaling axis functions in commensal-specific T cells to constrain Type 17 responses and moderate the activation status of microbiota-reactive lymphocytes at homeostasis. As such, modulation of neuroimmune CGRP-RAMP1 signaling in commensal-specific T cells shapes the overall activation status of the skin epithelium, thereby impacting the outcome of responses to insults such as wounding. The ability of somatosensory neurons to control adaptive immunity to the microbiota via the CGRP-RAMP1 axis underscores the various layers of regulation and multisystem coordination required for optimal microbiota-reactive T cell functions under steady state and pathology., Competing Interests: Competing interests statement:The authors declare no competing interest.- Published
- 2024
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5. The neuroimmune CGRP-RAMP1 axis tunes cutaneous adaptive immunity to the microbiota.
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Kulalert W, Wells AC, Link VM, Lim AI, Bouladoux N, Nagai M, Harrison OJ, Kamenyeva O, Kabat J, Enamorado M, Chiu IM, and Belkaid Y
- Abstract
The somatosensory nervous system surveils external stimuli at barrier tissues, regulating innate immune cells under infection and inflammation. The roles of sensory neurons in controlling the adaptive immune system, and more specifically immunity to the microbiota, however, remain elusive. Here, we identified a novel mechanism for direct neuroimmune communication between commensal-specific T lymphocytes and somatosensory neurons mediated by the neuropeptide Calcitonin Gene-Related Peptide (CGRP) in the skin. Intravital imaging revealed that commensal-specific T cells are in close proximity to cutaneous nerve fibers in vivo . Correspondingly, we observed upregulation of the receptor for the neuropeptide CGRP, RAMP1, in CD8
+ T lymphocytes induced by skin commensal colonization. Neuroimmune CGRP-RAMP1 signaling axis functions in commensal-specific T cells to constrain Type 17 responses and moderate the activation status of microbiota-reactive lymphocytes at homeostasis. As such, modulation of neuroimmune CGRP-RAMP1 signaling in commensal-specific T cells shapes the overall activation status of the skin epithelium, thereby impacting the outcome of responses to insults such as wounding. The ability of somatosensory neurons to control adaptive immunity to the microbiota via the CGRP-RAMP1 axis underscores the various layers of regulation and multisystem coordination required for optimal microbiota-reactive T cell functions under steady state and pathology., Significance Statement: Multisystem coordination at barrier surfaces is critical for optimal tissue functions and integrity, in response to microbial and environmental cues. In this study, we identified a novel neuroimmune crosstalk mechanism between the sensory nervous system and the adaptive immune response to the microbiota, mediated by the neuropeptide CGRP and its receptor RAMP1 on skin microbiota-induced T lymphocytes. The neuroimmune CGPR-RAMP1 axis constrains adaptive immunity to the microbiota and overall limits the activation status of the skin epithelium, impacting tissue responses to wounding. Our study opens the door to a new avenue to modulate adaptive immunity to the microbiota utilizing neuromodulators, allowing for a more integrative and tailored approach to harnessing microbiota-induced T cells to promote barrier tissue protection and repair.- Published
- 2023
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6. Push-pull mechanics of E-cadherin ectodomains in biomimetic adhesions.
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Nagendra K, Izzet A, Judd NB, Zakine R, Friedman L, Harrison OJ, Pontani LL, Shapiro L, Honig B, and Brujic J
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- Emulsions, Cell Adhesion, Protein Binding, Biomimetics, Cadherins metabolism
- Abstract
E-cadherin plays a central role in cell-cell adhesion. The ectodomains of wild-type cadherins form a crystalline-like two-dimensional lattice in cell-cell interfaces mediated by both trans (apposed cell) and cis (same cell) interactions. In addition to these extracellular forces, adhesive strength is further regulated by cytosolic phenomena involving α and β catenin-mediated interactions between cadherin and the actin cytoskeleton. Cell-cell adhesion can be further strengthened under tension through mechanisms that have not been definitively characterized in molecular detail. Here we quantitatively determine the role of the cadherin ectodomain in mechanosensing. To this end, we devise an E-cadherin-coated emulsion system, in which droplet surface tension is balanced by protein binding strength to give rise to stable areas of adhesion. To reach the honeycomb/cohesive limit, an initial emulsion compression by centrifugation facilitates E-cadherin trans binding, whereas a high protein surface concentration enables the cis-enhanced stabilization of the interface. We observe an abrupt concentration dependence on recruitment into adhesions of constant crystalline density, reminiscent of a first-order phase transition. Removing the lateral cis interaction with a "cis mutant" shifts this transition to higher surface densities leading to denser, yet weaker adhesions. In both proteins, the stabilization of progressively larger areas of deformation is consistent with single-molecule experiments that show a force-dependent lifetime enhancement in the cadherin ectodomain, which may be attributed to the "X-dimer" bond., Competing Interests: Declaration of interests The authors declare no competing interests, (Copyright © 2023 Biophysical Society. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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7. A cost analysis of robotic vs. video-assisted thoracic surgery: The impact of the learning curve and the COVID-19 pandemic.
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Harrison OJ, Maraschi A, Routledge T, Lampridis S, LeReun C, and Bille A
- Abstract
Introduction: Robot-assisted thoracoscopic surgery (RATS) is an alternative to video-assessed thoracoscopic surgery (VATS) for the treatment of lung cancer but concern exists regarding the high associated costs. The COVID-19 pandemic added further financial pressure to healthcare systems. This study investigated the impact of the learning curve on the cost-effectiveness of RATS lung resection and the financial impact of the COVID-19 pandemic on a RATS program., Methods: Patients undergoing RATS lung resection between January 2017 and December 2020 were prospectively followed. A matched cohort of VATS cases were analyzed in parallel. The first 100 and most recent 100 RATS cases performed at our institution were compared to assess the learning curve. Cases performed before and after March 2020 were compared to assess the impact of the COVID-19 pandemic. A comprehensive cost analysis of multiple theatre and postoperative data points was performed using Stata statistics package (v14.2)., Results: 365 RATS cases were included. Median cost per procedure was £7,167 and theatre cost accounted for 70%. Major contributing factors to overall cost were operative time and postoperative length of stay. Cost per case was £640 less after passing the learning curve ( p < 0.001) largely due to reduced operative time. Comparison of a post-learning curve RATS subgroup matched to 101 VATS cases revealed no significant difference in theatre costs between the two techniques. Overall cost of RATS lung resections performed before and during the COVID-19 pandemic were not significantly different. However, theatre costs were significantly cheaper (£620/case; p < 0.001) and postoperative costs were significantly more expensive (£1,221/case; p = 0.018) during the pandemic., Discussion: Passing the learning curve is associated with a significant reduction in the theatre costs associated with RATS lung resection and is comparable with the cost of VATS. This study may underestimate the true cost benefit of passing the learning curve due to the effect of the COVID-19 pandemic on theatre costs. The COVID-19 pandemic made RATS lung resection more expensive due to prolonged hospital stay and increased readmission rate. The present study offers some evidence that the initial increased costs associated with RATS lung resection may be gradually offset as a program progresses., Competing Interests: AB and TR are proctors for Intuitive Surgical. Intuitive Surgical provided a monetary grant to fund the independent statistical analysis. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (© 2023 Harrison, Maraschi, Routledge, Lampridis, Lereun and Bille.)
- Published
- 2023
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8. Ambulatory chest drainage with advanced nurse practitioner-led follow-up facilitates early discharge after thoracic surgery.
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Harrison OJ, Vilar Alvarez ME, Snow V, Tamburrini A, Woo E, Veres L, Chamberlain MH, and Alzetani A
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- Humans, Male, Middle Aged, Aged, Aged, 80 and over, Female, Pneumonectomy adverse effects, Follow-Up Studies, Retrospective Studies, Drainage adverse effects, Chest Tubes, Length of Stay, Patient Discharge, Thoracic Surgery
- Abstract
Objectives: To demonstrate the safety and feasibility of advanced nurse practitioner-led (ANP-led) outpatient follow-up after discharge with ambulatory chest drains for prolonged air leak and excessive fluid drainage., Methods: Patients discharged with ambulatory chest drains between January 2017 and December 2019 were retrospectively reviewed. Discharge criteria included air leak < 200 ml/min or fluid drainage > 100 ml/24 h on a digital drain. Patients were reviewed weekly in the clinic by ANPs, a highly skilled cohort of nurses with physician support available. Outcomes included length of stay, duration of air or fluid leak and complications., Results: Two-hundred patients were included, amounting to 368 clinic episodes. The median age was 68 ± 13 years and 119 (60%) were male. 112 (56%) patients underwent anatomical lung resection (total anatomical lung resections during the study period = 917) equating to a discharge with ambulatory chest drain rate of 12.2% in this group. The median length of stay was 6 ± 3 days and 176 (88%) patients were discharged with air leak versus 24 (12%) with excessive fluid drainage. The median time to drain removal was 12 ± 11 days. Complications occurred in 16 patients (8%) and 12 (6%) required readmission. An estimated 2075 inpatient days were saved over the study period equating to an annual cost saving of £123,167 (US$149,032) per annum., Conclusions: Patients with air leak or excessive fluid drainage can safely be discharged with ambulatory chest drains, allowing them to return to their familiar home environment safely and quickly. ANP-led clinics are a robust and cost-effective follow-up strategy and are associated with a low complication rate., (© 2022. The Author(s).)
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- 2023
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9. Genetically engineered multicistronic allele of Pmel yielding highly specific CreERT2-mediated recombination in the melanocyte lineage.
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Wilkinson EL, Brennan LC, Harrison OJ, Crane-Smith Z, Gautier P, Keighren MA, Budd P, Swaminathan K, Machesky LM, Allinson SL, Jackson IJ, and Mort RL
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- Mice, Animals, Mice, Transgenic, Alleles, Tamoxifen metabolism, Tamoxifen pharmacology, Melanocytes metabolism, Melanoma metabolism
- Abstract
Genetic approaches that allow lineage tracing are essential to our future understanding of melanocytes and melanoma. To date, the approaches used to label melanocytes in mice have relied on random integration of transgenes driven by the promoters of the Tyrosinase and Dopachrome tautomerase genes, knock-in to the Dopachrome tautomerase locus or knock-in to the Mlana locus in a bacterial artificial chromosome. These strategies result in expression in other tissues such as telencephalon and other cell types such as nerves. Here we used homologous recombination in mouse embryonic stem cells to generate a targeted multicistronic allele of the Pmel locus that drives melanocyte-specific expression of CreERT2, nuclear localised H2B-Cerulean and membrane localised marcks-mKate2 allowing live imaging of melanocytes and activation of other conditional alleles. We combined this allele with R26R-EYFP mice allowing induction of EYFP expression on administration of tamoxifen or its metabolite 4-OHT. The fluorescent proteins H2B-Cerulean and marcks-mKate2 label the cell nucleus and plasma membrane respectively allowing live imaging and FACS isolation of melanoblasts and melanocytes as well as serving to provide an internal control allowing estimation of recombination efficiency after administration of tamoxifen. We demonstrate the utility of the transgene in embryonic and adult tissues., (© 2022 The Authors. Pigment Cell & Melanoma Research published by John Wiley & Sons Ltd.)
- Published
- 2023
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10. A conserved population of MHC II-restricted, innate-like, commensal-reactive T cells in the gut of humans and mice.
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Hackstein CP, Costigan D, Drexhage L, Pearson C, Bullers S, Ilott N, Akther HD, Gu Y, FitzPatrick MEB, Harrison OJ, Garner LC, Mann EH, Pandey S, Friedrich M, Provine NM, Uhlig HH, Marchi E, Powrie F, Klenerman P, and Thornton EE
- Subjects
- Humans, Mice, Animals, Lymphocyte Count, Immunologic Surveillance, Cytokines, Colitis chemically induced
- Abstract
Interactions with commensal microbes shape host immunity on multiple levels and play a pivotal role in human health and disease. Tissue-dwelling, antigen-specific T cells are poised to respond to local insults, making their phenotype important in the relationship between host and microbes. Here we show that MHC-II restricted, commensal-reactive T cells in the colon of both humans and mice acquire transcriptional and functional characteristics associated with innate-like T cells. This cell population is abundant and conserved in the human and murine colon and endowed with polyfunctional effector properties spanning classic Th1- and Th17-cytokines, cytotoxic molecules, and regulators of epithelial homeostasis. T cells with this phenotype are increased in ulcerative colitis patients, and their presence aggravates pathology in dextran sodium sulphate-treated mice, pointing towards a pathogenic role in colitis. Our findings add to the expanding spectrum of innate-like immune cells positioned at the frontline of intestinal immune surveillance, capable of acting as sentinels of microbes and the local cytokine milieu., (© 2022. The Author(s).)
- Published
- 2022
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11. Th17 cells: from gut homeostasis to CNS pathogenesis.
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Buckner JH and Harrison OJ
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- Homeostasis, Humans, Inflammation pathology, Th17 Cells
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Th17 cells play crucial roles in host-microbe interactions, but can also promote chronic inflammation and tissue pathology. Factors influencing Th17 cell heterogeneity and effector functions in different inflammatory contexts remain unclear. Schnell et al. demonstrate that intestinal Th17 cells form a reservoir from which pathogenic Th17 cells can be elicited during severe tissue inflammation., Competing Interests: Declaration of interests No interests are declared., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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12. Computational model of E-cadherin clustering under force.
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Chen Y, Brasch J, Harrison OJ, and Bidone TC
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- Actomyosin metabolism, Cell Adhesion, Cluster Analysis, Cadherins, Mechanotransduction, Cellular
- Abstract
E-cadherins play a critical role in the formation of cell-cell adhesions for several physiological functions, including tissue development, repair, and homeostasis. The formation of clusters of E-cadherins involves extracellular adhesive (trans-) and lateral (cis-) associations between E-cadherin ectodomains and stabilization through intracellular binding to the actomyosin cytoskeleton. This binding provides force to the adhesion and is required for mechanotransduction. However, the exact role of cytoskeletal force on the clustering of E-cadherins is not well understood. To gain insights into this mechanism, we developed a computational model based on Brownian dynamics. In the model, E-cadherins transit between structural and functional states; they are able to bind and unbind other E-cadherins on the same and/or opposite cell(s) through trans- and cis-interactions while also creating dynamic links with the actomyosin cytoskeleton. Our results show that actomyosin force governs the fraction of E-cadherins in clusters and the size and number of clusters. For low forces (below 10 pN), a large number of small E-cadherin clusters form with less than five E-cadherins each. At higher forces, the probability of forming fewer but larger clusters increases. These findings support the idea that force reinforces cell-cell adhesions, which is consistent with differences in cluster size previously observed between apical and lateral junctions of epithelial tissues., (Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.)
- Published
- 2021
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13. sLRP1'in up retinol keeps the gut SAAfe.
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Labuda J and Harrison OJ
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- Carrier Proteins, Tretinoin metabolism, Vitamin A metabolism
- Abstract
Retinol is shuttled to myeloid cells for conversion to retinoic acid, but the receptor facilitating uptake of SAA:retinol complexes on myeloid cells is unknown. In a recent issue of Science, Bang et al. (2021) use genetic and biochemical approaches to reveal this critical receptor to be LRP1 and show that this axis is essential for intestinal innate and adaptive immune responses., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
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14. Combined minimally invasive resection of thoracic neurogenic dumbbell tumors: A European case series.
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Harrison OJ, Bakir A, Chamberlain MH, Nader-Sepahi A, and Amer KM
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- Adult, Aged, Female, Humans, Male, Middle Aged, Retrospective Studies, Laminectomy methods, Mediastinal Neoplasms surgery, Minimally Invasive Surgical Procedures methods, Neurilemmoma surgery, Thoracic Neoplasms surgery, Thoracic Surgery, Video-Assisted methods
- Abstract
Background: Paraspinal tumors are rare neoplasms arising from neurogenic elements of the posterior mediastinum and surgical resection can be challenging. Here, we demonstrate feasibility and outcomes from the first European case series of combined laminectomy and video-assisted thoracoscopic surgery (VATS) resection of thoracic neurogenic dumbbell tumors., Methods: A retrospective review of all combined thoracic dumbbell tumor resections performed at our institution between March 2015 to February 2019 was undertaken. Outcomes included operative time, blood loss, length of stay and recurrence rate. Statistical analysis was performed with SPSS statistics (v26). Values are given as mean ± standard deviation and median ± interquartile range., Results: Seven patients were included in the case series and there were no major complications or mortality. Mean tumor size and operative time were 66 (± 35) mm and 171 (± 63) min, respectively. Median blood loss and length of stay were 40 (± 70) ml and four (± 3) days, respectively. One patient required conversion to thoracotomy to remove a tumor of 135 mm in maximal dimension. Histology in all seven cases confirmed schwannoma. There was no disease recurrence at a maximum follow-up of 54 months., Conclusions: Our experience demonstrates favorable operative times, minimal blood loss and short length of stay when dealing with relatively large tumors compared to previous reports. Thoracotomy may be required for tumors exceeding 90 mm and chest drain removal on the operative day can facilitate early mobility and discharge. We advocate a combined, minimally invasive laminectomy and VATS resection as the gold-standard approach for thoracic neurogenic dumbbell tumors., (© 2021 The Authors. Thoracic Cancer published by China Lung Oncology Group and John Wiley & Sons Australia, Ltd.)
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- 2021
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15. Response to Comments on "Aberrant type 1 immunity drives susceptibility to mucosal fungal infections".
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Break TJ, Oikonomou V, Dutzan N, Desai JV, Swidergall M, Freiwald T, Chauss D, Harrison OJ, Alejo J, Williams DW, Pittaluga S, Lee CR, Bouladoux N, Swamydas M, Hoffman KW, Greenwell-Wild T, Bruno VM, Rosen LB, Lwin W, Renteria A, Pontejo SM, Shannon JP, Myles IA, Olbrich P, Ferré EMN, Schmitt M, Martin D, Barber DL, Solis NV, Notarangelo LD, Serreze DV, Matsumoto M, Hickman HD, Murphy PM, Anderson MS, Lim JK, Holland SM, Filler SG, Afzali B, Belkaid Y, Moutsopoulos NM, and Lionakis MS
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- Humans, Mucous Membrane, Animals, Mice, Immunity, Mucosal, Mycoses
- Abstract
Puel and Casanova and Kisand et al . challenge our conclusions that interferonopathy and not IL-17/IL-22 autoantibodies promote candidiasis in autoimmune polyendocrinopathy–candidiasis–ectodermal dystrophy. We acknowledge that conclusive evidence for causation is difficult to obtain in complex human diseases. However, our studies clearly document interferonopathy driving mucosal candidiasis with intact IL-17/IL-22 responses in Aire -deficient mice, with strong corroborative evidence in patients.
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- 2021
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16. Prenatal maternal infection promotes tissue-specific immunity and inflammation in offspring.
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Lim AI, McFadden T, Link VM, Han SJ, Karlsson RM, Stacy A, Farley TK, Lima-Junior DS, Harrison OJ, Desai JV, Lionakis MS, Shih HY, Cameron HA, and Belkaid Y
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- Animals, Candidiasis immunology, Chromatin metabolism, Epigenesis, Genetic, Epigenome, Female, Fetal Development, Gastrointestinal Microbiome immunology, Gastrointestinal Microbiome physiology, Interleukin-6 blood, Interleukin-6 pharmacology, Intestinal Mucosa cytology, Intestinal Mucosa embryology, Intestinal Mucosa immunology, Intestines embryology, Intestines microbiology, Mice, Pregnancy, Prenatal Exposure Delayed Effects, Salmonella Infections, Animal immunology, Stem Cells immunology, Stem Cells physiology, T-Lymphocyte Subsets immunology, Colitis immunology, Immunity, Interleukin-6 immunology, Intestines immunology, Pregnancy Complications, Infectious immunology, Th17 Cells immunology, Yersinia pseudotuberculosis Infections immunology
- Abstract
The immune system has evolved in the face of microbial exposure. How maternal infection experienced at distinct developmental stages shapes the offspring immune system remains poorly understood. Here, we show that during pregnancy, maternally restricted infection can have permanent and tissue-specific impacts on offspring immunity. Mechanistically, maternal interleukin-6 produced in response to infection can directly impose epigenetic changes on fetal intestinal epithelial stem cells, leading to long-lasting impacts on intestinal immune homeostasis. As a result, offspring of previously infected dams develop enhanced protective immunity to gut infection and increased inflammation in the context of colitis. Thus, maternal infection can be coopted by the fetus to promote long-term, tissue-specific fitness, a phenomenon that may come at the cost of predisposition to inflammatory disorders., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
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- 2021
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17. Environmental enteric dysfunction induces regulatory T cells that inhibit local CD4+ T cell responses and impair oral vaccine efficacy.
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Bhattacharjee A, Burr AHP, Overacre-Delgoffe AE, Tometich JT, Yang D, Huckestein BR, Linehan JL, Spencer SP, Hall JA, Harrison OJ, Morais da Fonseca D, Norton EB, Belkaid Y, and Hand TW
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- Administration, Oral, Animals, Cell Line, Disease Models, Animal, Drosophila, Escherichia coli immunology, Female, Forkhead Transcription Factors metabolism, Gastrointestinal Diseases microbiology, Gastrointestinal Diseases pathology, Male, Mice, Mice, Inbred C57BL, Mice, Transgenic, Nuclear Receptor Subfamily 1, Group F, Member 3 metabolism, Vaccination, Bacterial Toxins immunology, Escherichia coli Vaccines immunology, Gastrointestinal Diseases immunology, Intestine, Small immunology, T-Lymphocytes, Regulatory immunology
- Abstract
Environmental enteric dysfunction (EED) is a gastrointestinal inflammatory disease caused by malnutrition and chronic infection. EED is associated with stunting in children and reduced efficacy of oral vaccines. To study the mechanisms of oral vaccine failure during EED, we developed a microbiota- and diet-dependent mouse EED model. Analysis of E. coli-labile toxin vaccine-specific CD4
+ T cells in these mice revealed impaired CD4+ T cell responses in the small intestine and but not the lymph nodes. EED mice exhibited increased frequencies of small intestine-resident RORγT+ FOXP3+ regulatory T (Treg) cells. Targeted deletion of RORγT from Treg cells restored small intestinal vaccine-specific CD4 T cell responses and vaccine-mediated protection upon challenge. However, ablation of RORγT+ FOXP3+ Treg cells made mice more susceptible to EED-induced stunting. Our findings provide insight into the poor efficacy of oral vaccines in EED and highlight how RORγT+ FOXP3+ Treg cells can regulate intestinal immunity while leaving systemic responses intact., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
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18. Image-guided combined ablation and resection in thoracic surgery for the treatment of multiple pulmonary metastases: A preliminary case series.
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Harrison OJ, Sarvananthan S, Tamburrini A, Peebles C, and Alzetani A
- Abstract
Objectives: To demonstrate the feasibility and preliminary outcomes of a novel hybrid technique combining percutaneous microwave ablation and wire-assisted wedge resection for patients with multiple pulmonary metastases using intraoperative imaging., Methods: We describe our technique and present a retrospective case series of 4 patients undergoing iCART at our institution between August 2018 and January 2020. Procedures were performed in a hybrid operating suite using the ARTIS Pheno cone beam computerized tomography scanner (Siemens Healthineers, Erlangen, German). Patient information included past history of malignancy as well as lesion size, depth, location, and histology result. Surgical complications and length of stay were also recorded., Results: Five procedures were performed on 4 patients during the study period. One patient underwent bilateral procedures 4 weeks apart. All patients underwent at least 1 ablation and 1 wedge resection during the combined procedure. Patient ages ranged from 40 to 66 years and the majority (75%) were men. All had a past history of cancer. Lesions were treated in every lobe. Size and depth ranged from 6 to 24 mm and 21 to 33 mm, respectively, for ablated nodules and 5 to 27 mm and 0 to 22 mm, respectively, for the wedge resected nodules. Three procedures were completed uniportal and operative time ranged from 51 to 210 minutes. All cases sustained <10 mL blood loss. There were 2 intraoperative pneumothorax, 1 prevented successful completion of the ablation. One patient required a prolonged period of postoperative physiotherapy and was discharged on day 6. The other patients were discharged on postoperative day 2 or 3. All 5 histology specimens confirmed metastatic disease., Conclusions: Our hybrid approach provides a minimally invasive and comprehensive personalized therapy for patients with multiple pulmonary metastases under a single general anesthetic. It provides histology-based diagnosis whilst minimizing lung tissue loss and eliminating the need for transfer from radiology to operating theatre. Emergence of ablation as a treatment for stage 1 non-small cell lung cancer and the expansion of lung cancer screening may widen the application of iCART in the future., (© 2021 The Author(s).)
- Published
- 2021
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19. Aberrant type 1 immunity drives susceptibility to mucosal fungal infections.
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Break TJ, Oikonomou V, Dutzan N, Desai JV, Swidergall M, Freiwald T, Chauss D, Harrison OJ, Alejo J, Williams DW, Pittaluga S, Lee CR, Bouladoux N, Swamydas M, Hoffman KW, Greenwell-Wild T, Bruno VM, Rosen LB, Lwin W, Renteria A, Pontejo SM, Shannon JP, Myles IA, Olbrich P, Ferré EMN, Schmitt M, Martin D, Barber DL, Solis NV, Notarangelo LD, Serreze DV, Matsumoto M, Hickman HD, Murphy PM, Anderson MS, Lim JK, Holland SM, Filler SG, Afzali B, Belkaid Y, Moutsopoulos NM, and Lionakis MS
- Subjects
- Adolescent, Adult, Aged, Animals, Disease Models, Animal, Female, Humans, Immunity, Mucosal genetics, Immunologic Surveillance genetics, Immunologic Surveillance immunology, Interferon-gamma genetics, Interleukins genetics, Janus Kinases genetics, Male, Mice, Mice, Inbred BALB C, Middle Aged, Mouth Mucosa immunology, Mouth Mucosa pathology, Receptors, Interleukin-17 genetics, STAT1 Transcription Factor genetics, T-Lymphocytes immunology, Young Adult, Interleukin-22, Candida albicans immunology, Candidiasis, Chronic Mucocutaneous genetics, Candidiasis, Chronic Mucocutaneous immunology, Immunity, Mucosal immunology, Polyendocrinopathies, Autoimmune genetics, Polyendocrinopathies, Autoimmune immunology
- Abstract
Human monogenic disorders have revealed the critical contribution of type 17 responses in mucosal fungal surveillance. We unexpectedly found that in certain settings, enhanced type 1 immunity rather than defective type 17 responses can promote mucosal fungal infection susceptibility. Notably, in mice and humans with AIRE deficiency, an autoimmune disease characterized by selective susceptibility to mucosal but not systemic fungal infection, mucosal type 17 responses are intact while type 1 responses are exacerbated. These responses promote aberrant interferon-γ (IFN-γ)- and signal transducer and activator of transcription 1 (STAT1)-dependent epithelial barrier defects as well as mucosal fungal infection susceptibility. Concordantly, genetic and pharmacologic inhibition of IFN-γ or Janus kinase (JAK)-STAT signaling ameliorates mucosal fungal disease. Thus, we identify aberrant T cell-dependent, type 1 mucosal inflammation as a critical tissue-specific pathogenic mechanism that promotes mucosal fungal infection susceptibility in mice and humans., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
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- 2021
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20. Gut microbiome stability and dynamics in healthy donors and patients with non-gastrointestinal cancers.
- Author
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Byrd AL, Liu M, Fujimura KE, Lyalina S, Nagarkar DR, Charbit B, Bergstedt J, Patin E, Harrison OJ, Quintana-Murci L, Mellman I, Duffy D, and Albert ML
- Subjects
- Adult, Aged, Bifidobacterium classification, Female, Humans, Male, Middle Aged, Bifidobacterium growth & development, Gastrointestinal Microbiome, Neoplasms microbiology
- Abstract
As microbial therapeutics are increasingly being tested in diverse patient populations, it is essential to understand the host and environmental factors influencing the microbiome. Through analysis of 1,359 gut microbiome samples from 946 healthy donors of the Milieu Intérieur cohort, we detail how microbiome composition is associated with host factors, lifestyle parameters, and disease states. Using a genome-based taxonomy, we found biological sex was the strongest driver of community composition. Additionally, bacterial populations shift across decades of life (age 20-69), with Bacteroidota species consistently increased with age while Actinobacteriota species, including Bifidobacterium, decreased. Longitudinal sampling revealed that short-term stability exceeds interindividual differences. By accounting for these factors, we defined global shifts in the microbiomes of patients with non-gastrointestinal tumors compared with healthy donors. Together, these results demonstrated that the microbiome displays predictable variations as a function of sex, age, and disease state. These variations must be considered when designing microbiome-targeted therapies or interpreting differences thought to be linked to pathophysiology or therapeutic response., Competing Interests: Disclosures: A.L. Byrd, K.E. Fujimura, S. Lyalina, D.R. Nagarkar, and I. Mellman reported being employees of Genentech. M. Liu reported being a former employee of Genentech. The current work does not pertain to any marketed Genentech product. D. Duffy reported grants from Genentech during the conduct of the study. M.L. Albert reported being an employee of Insitro. No other disclosures were reported., (© 2020 Byrd et al.)
- Published
- 2021
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21. Tracheal leiomyoma mimicking asthma for over 20 years.
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Harrison OJ, Jackson M, Shaw E, and Alzetani A
- Abstract
Benign tracheal tumours have an incidence of 1 in 1,000,000, of which leiomyomas represent only 1%. We report a case of tracheal leiomyoma masquerading as asthma for over 20 years. A 48-year-old man presented aged 26 years with asthma symptoms unresponsive to treatments and an obstructive spirometry pattern. Symptoms were not particularly troubling but suddenly exacerbated 22 years later. Flow-volume studies were consistent with upper airway obstruction. Computed tomography chest revealed a 2.3 cm mass arising from the posterior aspect of the trachea 2 cm above the carina. Bronchoscopic resection was performed using a Nd:YAG laser. Histology confirmed leiomyoma. Follow-up after 6 weeks revealed complete resolution of symptoms with normal spirometry. Tracheal masses should be considered in any patient with atypical asthma. A flow-volume loop may provide a clue to diagnosis and bronchoscopic laser resection is a minimally invasive treatment option., (© Crown copyright 2020.)
- Published
- 2020
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22. Immunity to commensal skin fungi promotes psoriasiform skin inflammation.
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Hurabielle C, Link VM, Bouladoux N, Han SJ, Merrill ED, Lightfoot YL, Seto N, Bleck CKE, Smelkinson M, Harrison OJ, Linehan JL, Tamoutounour S, Lionakis MS, Kaplan MJ, Nakajima S, and Belkaid Y
- Subjects
- Animals, Arthrodermataceae classification, Arthrodermataceae genetics, Arthrodermataceae isolation & purification, Extracellular Traps immunology, Extracellular Traps microbiology, Female, Humans, Immunity, Male, Mice, Mice, Inbred C57BL, Psoriasis microbiology, Psoriasis pathology, Skin immunology, Skin pathology, Symbiosis, Th17 Cells immunology, Arthrodermataceae physiology, Microbiota, Psoriasis immunology, Skin microbiology
- Abstract
Under steady-state conditions, the immune system is poised to sense and respond to the microbiota. As such, immunity to the microbiota, including T cell responses, is expected to precede any inflammatory trigger. How this pool of preformed microbiota-specific T cells contributes to tissue pathologies remains unclear. Here, using an experimental model of psoriasis, we show that recall responses to commensal skin fungi can significantly aggravate tissue inflammation. Enhanced pathology caused by fungi preexposure depends on Th17 responses and neutrophil extracellular traps and recapitulates features of the transcriptional landscape of human lesional psoriatic skin. Together, our results propose that recall responses directed to skin fungi can directly promote skin inflammation and that exploration of tissue inflammation should be assessed in the context of recall responses to the microbiota., Competing Interests: Competing interest statement: D.K. and S.N. are coauthors on a 2012 original article and a 2018 review paper. S.T. is an employee of L’Oréal Research and Innovation.
- Published
- 2020
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23. Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered δ-Protocadherins.
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Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna RV, Potter CS, Carragher B, Honig B, and Shapiro L
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- Animals, Cadherins genetics, Conserved Sequence, Female, HEK293 Cells, Humans, Kinetics, Liposomes, Models, Molecular, Mutation genetics, Protein Binding, Protein Domains, Protein Multimerization, Solutions, Structure-Activity Relationship, Surface Plasmon Resonance, Xenopus, Biophysical Phenomena, Cadherins chemistry, Cadherins metabolism
- Abstract
Non-clustered δ1- and δ2-protocadherins, close relatives of clustered protocadherins, function in cell adhesion and motility and play essential roles in neural patterning. To understand the molecular interactions underlying these functions, we used solution biophysics to characterize binding of δ1- and δ2-protocadherins, determined crystal structures of ectodomain complexes from each family, and assessed ectodomain assembly in reconstituted intermembrane junctions by cryoelectron tomography (cryo-ET). Homophilic trans (cell-cell) interactions were preferred for all δ-protocadherins, with additional weaker heterophilic interactions observed exclusively within each subfamily. As expected, δ1- and δ2-protocadherin trans dimers formed through antiparallel EC1-EC4 interfaces, like clustered protocadherins. However, no ectodomain-mediated cis (same-cell) interactions were detectable in solution; consistent with this, cryo-ET of reconstituted junctions revealed dense assemblies lacking the characteristic order observed for clustered protocadherins. Our results define non-clustered protocadherin binding properties and their structural basis, providing a foundation for interpreting their functional roles in neural patterning., Competing Interests: Declaration of Interests The authors declare no competing interests., (Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2020
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24. Keratinocyte-intrinsic MHCII expression controls microbiota-induced Th1 cell responses.
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Tamoutounour S, Han SJ, Deckers J, Constantinides MG, Hurabielle C, Harrison OJ, Bouladoux N, Linehan JL, Link VM, Vujkovic-Cvijin I, Perez-Chaparro PJ, Rosshart SP, Rehermann B, Lazarevic V, and Belkaid Y
- Subjects
- Animals, Antigen Presentation, Candida albicans immunology, Epidermis immunology, Genes, MHC Class II, Interferon-gamma biosynthesis, Keratinocytes metabolism, Mice, Mice, Inbred C57BL, Organ Specificity, Radiation Chimera, Specific Pathogen-Free Organisms, Staphylococcus aureus immunology, Staphylococcus epidermidis immunology, Symbiosis, Th1 Cells metabolism, Epidermis microbiology, Histocompatibility Antigens Class II biosynthesis, Host Microbial Interactions immunology, Keratinocytes immunology, Microbiota immunology, Th1 Cells immunology
- Abstract
The cross-talk between the microbiota and the immune system plays a fundamental role in the control of host physiology. However, the tissue-specific factors controlling this dialogue remain poorly understood. Here we demonstrate that T cell responses to commensal colonization are associated with the development of organized cellular clusters within the skin epithelium. These organized lymphocyte clusters are surrounded by keratinocytes expressing a discrete program associated with antigen presentation and antimicrobial defense. Notably, IL-22-mediated keratinocyte-intrinsic MHC class II expression was required for the selective accumulation of commensal-induced IFN-γ, but not IL-17A-producing CD4
+ T cells within the skin. Taking these data together, this work uncovers an unexpected role for MHC class II expression by keratinocytes in the control of homeostatic type 1 responses to the microbiota. Our findings have important implications for the understanding of the tissue-specific rules governing the dialogue between a host and its microbiota., Competing Interests: The authors declare no competing interest.- Published
- 2019
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25. Neuropeptide CGRP Limits Group 2 Innate Lymphoid Cell Responses and Constrains Type 2 Inflammation.
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Nagashima H, Mahlakõiv T, Shih HY, Davis FP, Meylan F, Huang Y, Harrison OJ, Yao C, Mikami Y, Urban JF Jr, Caron KM, Belkaid Y, Kanno Y, Artis D, and O'Shea JJ
- Subjects
- Animals, Cells, Cultured, Cytokines metabolism, Immunity, Innate, Interleukin-33 metabolism, Mice, Mice, Inbred C57BL, Mice, Knockout, Neuropeptides metabolism, Receptors, Calcitonin Gene-Related Peptide genetics, Single-Cell Analysis, Th2 Cells immunology, Transplantation Chimera, Inflammation immunology, Lymphocytes immunology, Nippostrongylus physiology, Receptors, Calcitonin Gene-Related Peptide metabolism, Strongylida Infections immunology
- Abstract
Innate lymphocytes maintain tissue homeostasis at mucosal barriers, with group 2 innate lymphoid cells (ILC2s) producing type 2 cytokines and controlling helminth infection. While the molecular understanding of ILC2 responses has advanced, the complexity of microenvironmental factors impacting ILC2s is becoming increasingly apparent. Herein, we used single-cell analysis to explore the diversity of gene expression among lung lymphocytes during helminth infection. Following infection, we identified a subset of ILC2s that preferentially expressed Il5-encoding interleukin (IL)-5, together with Calca-encoding calcitonin gene-related peptide (CGRP) and its cognate receptor components. CGRP in concert with IL-33 and neuromedin U (NMU) supported IL-5 but constrained IL-13 expression and ILC2 proliferation. Without CGRP signaling, ILC2 responses and worm expulsion were enhanced. Collectively, these data point to CGRP as a context-dependent negative regulatory factor that shapes innate lymphocyte responses to alarmins and neuropeptides during type 2 innate immune responses., (Published by Elsevier Inc.)
- Published
- 2019
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26. Trans -endocytosis elicited by nectins transfers cytoplasmic cargo, including infectious material, between cells.
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Generous AR, Harrison OJ, Troyanovsky RB, Mateo M, Navaratnarajah CK, Donohue RC, Pfaller CK, Alekhina O, Sergeeva AP, Indra I, Thornburg T, Kochetkova I, Billadeau DD, Taylor MP, Troyanovsky SM, Honig B, Shapiro L, and Cattaneo R
- Subjects
- Biological Transport, Active genetics, Cell Adhesion genetics, Cell Adhesion Molecules genetics, Cell Line, Humans, Measles virus genetics, Nectins genetics, Cell Adhesion Molecules metabolism, Endocytosis, Epithelial Cells metabolism, Measles virus metabolism, Nectins metabolism, Virus Internalization
- Abstract
Here, we show that cells expressing the adherens junction protein nectin-1 capture nectin-4-containing membranes from the surface of adjacent cells in a trans -endocytosis process. We find that internalized nectin-1-nectin-4 complexes follow the endocytic pathway. The nectin-1 cytoplasmic tail controls transfer: its deletion prevents trans -endocytosis, while its exchange with the nectin-4 tail reverses transfer direction. Nectin-1-expressing cells acquire dye-labeled cytoplasmic proteins synchronously with nectin-4, a process most active during cell adhesion. Some cytoplasmic cargo remains functional after transfer, as demonstrated with encapsidated genomes of measles virus (MeV). This virus uses nectin-4, but not nectin-1, as a receptor. Epithelial cells expressing nectin-4, but not those expressing another MeV receptor in its place, can transfer infection to nectin-1-expressing primary neurons. Thus, this newly discovered process can move cytoplasmic cargo, including infectious material, from epithelial cells to neurons. We name the process nectin-elicited cytoplasm transfer (NECT). NECT-related trans- endocytosis processes may be exploited by pathogens to extend tropism. This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interestsThe authors declare no competing or financial interests., (© 2019. Published by The Company of Biologists Ltd.)
- Published
- 2019
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27. Defective NOTCH signalling drives smooth muscle cell death and differentiation in bicuspid aortic valve aortopathy.
- Author
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Harrison OJ, Torrens C, Salhiyyah K, Modi A, Moorjani N, Townsend PA, Ohri SK, and Cagampang F
- Subjects
- Adult, Aged, Aortic Aneurysm metabolism, Aortic Valve cytology, Aortic Valve metabolism, Aortic Valve pathology, Apoptosis genetics, Bicuspid Aortic Valve Disease, Cell Differentiation genetics, Cell Differentiation physiology, Female, Gene Expression, Humans, Male, Middle Aged, Aortic Valve abnormalities, Apoptosis physiology, Heart Valve Diseases metabolism, Heart Valve Diseases pathology, Myocytes, Smooth Muscle cytology, Myocytes, Smooth Muscle metabolism, Receptors, Notch metabolism, Signal Transduction physiology
- Abstract
Objectives: Bicuspid aortic valve disease is common and is associated with ascending aortic aneurysms. Vascular smooth muscle cell (VSMC) apoptosis is characteristic of the ascending aorta of bicuspid patients, and NOTCH1 gene mutations have also been linked to the disease. NOTCH signalling is a fundamental cell signalling pathway, which dictates cell fate decisions including apoptosis. Our objective was to elucidate the role of NOTCH signalling in VSMC apoptosis and differentiation in bicuspid aortopathy., Methods: Ascending aortic biopsies were obtained from 19 bicuspid and 12 tricuspid aortic valve patients and were sub-classified into 4 groups according to the maximum ascending aortic diameter (aneurysmal ≥45 mm). Apoptotic VSMCs were counted by light microscopy using a TUNEL assay. Gene expression of key regulators of NOTCH signalling (NOTCH1 and HES1), apoptosis (BAX and BCL-2) and VSMC differentiation (MYH11, CNN1 and MYH10) were quantified using quantitative real-time PCR. Primary VSMCs were cultured from 2 tricuspid aortic valve and 2 bicuspid aortic valve patients, NOTCH signalling was inhibited with N-[N-(3,5-Difluorophenacetyl)-l-alanyl]-S-phenylglycine t-butyl ester, and the gene expression was again quantified., Results: The apoptotic cell count was significantly higher in bicuspid aortic valve patients (3.2 cells/50 000 μm2 vs 1.1 cells/50 000 μm2; P = 0.033). There was a trend towards lower apoptotic cell count in the aneurysmal versus non-aneurysmal tricuspid and bicuspid groups and an increased ratio of proapoptotic gene expression, which was not statistically significant. This was associated with a 2.8-fold increase in contractile gene expression (P = 0.026) and a 2.0-fold increase in NOTCH signalling gene expression in bicuspid versus tricuspid aortic valve patients (P = 0.022). NOTCH inhibition in cultured VSMCs induced a similar pattern of increased proapoptotic and procontractile gene expressions., Conclusions: This preliminary study suggests that NOTCH activation in the non-aneurysmal bicuspid aortas may underlie aortopathy by influencing VSMC apoptosis and differentiation. NOTCH signalling manipulation may provide a therapeutic target for preventing aneurysms in bicuspid patients. Further studies with larger sample sizes are needed to substantiate the present findings., (© The Author(s) 2019. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.)
- Published
- 2019
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28. Pre-birth memory.
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Lim AI, Harrison OJ, and Belkaid Y
- Subjects
- Humans, Aborted Fetus, CD4-Positive T-Lymphocytes immunology, Intestines embryology, Intestines immunology
- Published
- 2019
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29. Author Correction: c-MAF-dependent regulatory T cells mediate immunological tolerance to a gut pathobiont.
- Author
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Xu M, Pokrovskii M, Ding Y, Yi R, Au C, Harrison OJ, Galan C, Belkaid Y, Bonneau R, and Littman DR
- Abstract
In this Letter, the 'Competing interests' statement should have stated: 'D.R.L. consults for and has equity in Vedanta Biosciences.' The original Letter has not been corrected.
- Published
- 2019
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30. Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury.
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Harrison OJ, Linehan JL, Shih HY, Bouladoux N, Han SJ, Smelkinson M, Sen SK, Byrd AL, Enamorado M, Yao C, Tamoutounour S, Van Laethem F, Hurabielle C, Collins N, Paun A, Salcedo R, O'Shea JJ, and Belkaid Y
- Subjects
- Alarmins immunology, Animals, CD8-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes microbiology, Candida albicans, Female, GATA3 Transcription Factor metabolism, Interleukins immunology, Male, Mice, Inbred C57BL, Mice, Transgenic, Microscopy, Confocal, Microscopy, Fluorescence, Nuclear Receptor Subfamily 1, Group F, Member 3 metabolism, Sequence Analysis, RNA, Staphylococcus epidermidis, Transcriptome, Cell Plasticity, Skin injuries, Skin microbiology, Symbiosis, Th17 Cells immunology, Th17 Cells microbiology, Wounds and Injuries immunology
- Abstract
Barrier tissues are primary targets of environmental stressors and are home to the largest number of antigen-experienced lymphocytes in the body, including commensal-specific T cells. We found that skin-resident commensal-specific T cells harbor a paradoxical program characterized by a type 17 program associated with a poised type 2 state. Thus, in the context of injury and exposure to inflammatory mediators such as interleukin-18, these cells rapidly release type 2 cytokines, thereby acquiring contextual functions. Such acquisition of a type 2 effector program promotes tissue repair. Aberrant type 2 responses can also be unleashed in the context of local defects in immunoregulation. Thus, commensal-specific T cells co-opt tissue residency and cell-intrinsic flexibility as a means to promote both local immunity and tissue adaptation to injury., (Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2019
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31. Candidate plasma biomarkers for predicting ascending aortic aneurysm in bicuspid aortic valve disease.
- Author
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Harrison OJ, Cagampang F, Ohri SK, Torrens C, Salhiyyah K, Modi A, Moorjani N, Whetton AD, and Townsend PA
- Subjects
- Adult, Aged, Aorta surgery, Aortic Aneurysm surgery, Bicuspid Aortic Valve Disease, Female, Humans, Logistic Models, Male, Middle Aged, Pilot Projects, Prospective Studies, Risk Factors, Aortic Aneurysm blood, Aortic Valve abnormalities, Biomarkers blood, Echocardiography, Transesophageal, Heart Valve Diseases blood
- Abstract
Background: Bicuspid aortic valve (BAV) disease is the most common congenital cardiac abnormality affecting 1-2% of the population and is associated with a significantly increased risk of ascending aortic aneurysm. However, predicting which patients will develop aneurysms remains a challenge. This pilot study aimed to identify candidate plasma biomarkers for monitoring ascending aortic diameter and predicting risk of future aneurysm in BAV patients., Methods: Plasma samples were collected pre-operatively from BAV patients undergoing aortic valve surgery. Maximum ascending aortic diameter was measured on pre-operative transoesophageal echocardiography. Maximum diameter ≥ 45 mm was classified as aneurysmal. Sequential Window Acquisition of all THeoretical Mass Spectra (SWATH-MS), an advanced mass spectrometry technique, was used to identify and quantify all proteins within the samples. Protein abundance and aortic diameter were correlated using logistic regression. Levene's test was used to identify proteins demonstrating low abundance variability in the aneurysmal patients (consistent expression in disease), and high variability in the non-aneurysmal patients (differential expression between 'at risk' and not 'at risk' patients)., Results: Fifteen plasma samples were collected (seven non-aneurysmal and 8 aneurysmal BAV patients). The mean age of the patients was 55.5 years and the majority were female (10/15, 67%). Four proteins (haemoglobin subunits alpha, beta and delta and mannan-binding lectin serine protease) correlated significantly with maximal ascending aortic diameter (p < 0.05, r = 0.5-0.6). Five plasma proteins demonstrated significantly lower variability in the aneurysmal group and may indicate increased risk of aneurysm in non-aneurysmal patients (DNA-dependent protein kinase catalytic subunit, lumican, tetranectin, gelsolin and cartilage acidic protein 1). A further 7 proteins were identified only in the aneurysmal group (matrin-3, glucose-6-phosphate isomerase, coactosin-like protein, peptidyl-prolyl cis-trans isomerase A, golgin subfamily B member 1, myeloperoxidase and 2'-deoxynucleoside 5'-phosphate N-hydrolase 1)., Conclusions: This study is the first to identify candidate plasma biomarkers for predicting aortic diameter and risk of future aneurysm in BAV patients. It provides valuable pilot data and proof of principle that could be used to design a large-scale prospective investigation. Ultimately, a more affordable 'off-the-shelf' follow-on blood assay could then be developed in place of SWATH-MS, for use in the healthcare setting.
- Published
- 2018
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32. Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
- Author
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Brasch J, Katsamba PS, Harrison OJ, Ahlsén G, Troyanovsky RB, Indra I, Kaczynska A, Kaeser B, Troyanovsky S, Honig B, and Shapiro L
- Subjects
- Amino Acid Sequence, Animals, Cadherins chemistry, Cell Adhesion, Cell Line, Conserved Sequence, DNA Mutational Analysis, Humans, Mice, Mutation genetics, Phylogeny, Protein Binding, Protein Multimerization, Cadherins metabolism
- Abstract
Type II cadherins are cell-cell adhesion proteins critical for tissue patterning and neuronal targeting but whose molecular binding code remains poorly understood. Here, we delineate binding preferences for type II cadherin cell-adhesive regions, revealing extensive heterophilic interactions between specific pairs, in addition to homophilic interactions. Three distinct specificity groups emerge from our analysis with members that share highly similar heterophilic binding patterns and favor binding to one another. Structures of adhesive fragments from each specificity group confirm near-identical dimer topology conserved throughout the family, allowing interface residues whose conservation corresponds to specificity preferences to be identified. We show that targeted mutation of these residues converts binding preferences between specificity groups in biophysical and co-culture assays. Our results provide a detailed understanding of the type II cadherin interaction map and a basis for defining their role in tissue patterning and for the emerging importance of their heterophilic interactions in neural connectivity., (Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2018
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33. Pathogenic IgG4 autoantibodies from endemic pemphigus foliaceus recognize a desmoglein-1 conformational epitope.
- Author
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Evangelista F, Roth AJ, Prisayanh P, Temple BR, Li N, Qian Y, Culton DA, Liu Z, Harrison OJ, Brasch J, Honig B, Shapiro L, and Diaz LA
- Subjects
- Animals, Autoantibodies immunology, Brazil epidemiology, Cells, Cultured, Endemic Diseases, Epitope Mapping, Humans, Immunization, Passive, Immunoglobulin G immunology, Mice, Mice, Inbred BALB C, Mutagenesis, Site-Directed, Pemphigus epidemiology, Protein Binding, Protein Conformation, Autoantibodies metabolism, Desmoglein 1 immunology, Desmosomes metabolism, Epitopes, B-Lymphocyte immunology, Immunoglobulin G metabolism, Pemphigus immunology, Peptides immunology
- Abstract
Fogo Selvagem (FS), the endemic form of pemphigus foliaceus, is mediated by pathogenic IgG4 autoantibodies against the amino-terminal extracellular cadherin domain of the desmosomal cadherin desmoglein 1 (Dsg1). Here we define the detailed epitopes of these pathogenic antibodies. Proteolytic footprinting showed that IgG4 from 95% of FS donor sera (19/20) recognized a 16-residue peptide (A
129 LNSMGQDLERPLELR144 ) from the EC1 domain of Dsg1 that overlaps the binding site for an adhesive-partner desmosomal cadherin molecule. Mutation of Dsg1 residues M133 and Q135 reduced the binding of FS IgG4 autoantibodies to Dsg1 by ∼50%. Molecular modeling identified two nearby EC1 domain residues (Q82 and V83 ) likely to contribute to the epitope. Mutation of these residues completely abolished the binding of FS IgG4 to Dsg1. Bead aggregation assays showed that native binding interactions between Dsg1 and desmocollin 1 (Dsc1), which underlie desmosome structure, were abolished by Fab fragments of FS IgG4. These results further define the molecular mechanism by which FS IgG4 autoantibodies interfere with desmosome structure and lead to cell-cell detachment, the hallmark of this disease., (Copyright © 2018 Elsevier Ltd. All rights reserved.)- Published
- 2018
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34. c-MAF-dependent regulatory T cells mediate immunological tolerance to a gut pathobiont.
- Author
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Xu M, Pokrovskii M, Ding Y, Yi R, Au C, Harrison OJ, Galan C, Belkaid Y, Bonneau R, and Littman DR
- Subjects
- Animals, Bioengineering, Colitis pathology, Female, Forkhead Transcription Factors metabolism, Helicobacter hepaticus genetics, Helicobacter hepaticus pathogenicity, Homeostasis, Host-Pathogen Interactions, Interleukin-10 biosynthesis, Interleukin-10 deficiency, Interleukin-10 immunology, Male, Mice, Nuclear Receptor Subfamily 1, Group F, Member 3 antagonists & inhibitors, Nuclear Receptor Subfamily 1, Group F, Member 3 metabolism, Proto-Oncogene Proteins c-maf deficiency, T-Lymphocytes, Regulatory cytology, T-Lymphocytes, Regulatory metabolism, Th17 Cells cytology, Th17 Cells immunology, Colitis immunology, Colitis microbiology, Helicobacter hepaticus immunology, Immune Tolerance, Intestines immunology, Intestines microbiology, Proto-Oncogene Proteins c-maf metabolism, T-Lymphocytes, Regulatory immunology
- Abstract
Both microbial and host genetic factors contribute to the pathogenesis of autoimmune diseases. There is accumulating evidence that microbial species that potentiate chronic inflammation, as in inflammatory bowel disease, often also colonize healthy individuals. These microorganisms, including the Helicobacter species, can induce pathogenic T cells and are collectively referred to as pathobionts. However, how such T cells are constrained in healthy individuals is not yet understood. Here we report that host tolerance to a potentially pathogenic bacterium, Helicobacter hepaticus, is mediated by the induction of RORγt
+ FOXP3+ regulatory T (iTreg ) cells that selectively restrain pro-inflammatory T helper 17 (TH 17) cells and whose function is dependent on the transcription factor c-MAF. Whereas colonization of wild-type mice by H. hepaticus promoted differentiation of RORγt-expressing microorganism-specific iTreg cells in the large intestine, in disease-susceptible IL-10-deficient mice, there was instead expansion of colitogenic TH 17 cells. Inactivation of c-MAF in the Treg cell compartment impaired differentiation and function, including IL-10 production, of bacteria-specific iTreg cells, and resulted in the accumulation of H. hepaticus-specific inflammatory TH 17 cells and spontaneous colitis. By contrast, RORγt inactivation in Treg cells had only a minor effect on the bacteria-specific Treg and TH 17 cell balance, and did not result in inflammation. Our results suggest that pathobiont-dependent inflammatory bowel disease is driven by microbiota-reactive T cells that have escaped this c-MAF-dependent mechanism of iTreg -TH 17 homeostasis.- Published
- 2018
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35. Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair.
- Author
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Linehan JL, Harrison OJ, Han SJ, Byrd AL, Vujkovic-Cvijin I, Villarino AV, Sen SK, Shaik J, Smelkinson M, Tamoutounour S, Collins N, Bouladoux N, Dzutsev A, Rosshart SP, Arbuckle JH, Wang CR, Kristie TM, Rehermann B, Trinchieri G, Brenchley JM, O'Shea JJ, and Belkaid Y
- Subjects
- Animals, Gene Expression Regulation immunology, Histocompatibility Antigens Class I genetics, Mice, Mice, Transgenic, Adaptive Immunity, Bacteria immunology, Histocompatibility Antigens Class I immunology, Microbiota immunology, Skin immunology, T-Lymphocytes immunology
- Abstract
Mammalian barrier surfaces are constitutively colonized by numerous microorganisms. We explored how the microbiota was sensed by the immune system and the defining properties of such responses. Here, we show that a skin commensal can induce T cell responses in a manner that is restricted to non-classical MHC class I molecules. These responses are uncoupled from inflammation and highly distinct from pathogen-induced cells. Commensal-specific T cells express a defined gene signature that is characterized by expression of effector genes together with immunoregulatory and tissue-repair signatures. As such, non-classical MHCI-restricted commensal-specific immune responses not only promoted protection to pathogens, but also accelerated skin wound closure. Thus, the microbiota can induce a highly physiological and pleiotropic form of adaptive immunity that couples antimicrobial function with tissue repair. Our work also reveals that non-classical MHC class I molecules, an evolutionarily ancient arm of the immune system, can promote homeostatic immunity to the microbiota., (Published by Elsevier Inc.)
- Published
- 2018
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36. White Adipose Tissue Is a Reservoir for Memory T Cells and Promotes Protective Memory Responses to Infection.
- Author
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Han SJ, Glatman Zaretsky A, Andrade-Oliveira V, Collins N, Dzutsev A, Shaik J, Morais da Fonseca D, Harrison OJ, Tamoutounour S, Byrd AL, Smelkinson M, Bouladoux N, Bliska JB, Brenchley JM, Brodsky IE, and Belkaid Y
- Subjects
- Adipose Tissue, White immunology, Animals, Bacterial Proteins genetics, Bacterial Proteins metabolism, CD4-Positive T-Lymphocytes microbiology, CD4-Positive T-Lymphocytes parasitology, CD8-Positive T-Lymphocytes microbiology, CD8-Positive T-Lymphocytes parasitology, Gene Expression, Genes, Reporter, Interferon-gamma genetics, Interferon-gamma immunology, Interleukin-17 genetics, Interleukin-17 immunology, Interleukin-5 genetics, Interleukin-5 immunology, Lipid Metabolism, Luminescent Proteins genetics, Luminescent Proteins metabolism, Mice, Mice, Inbred C57BL, Mice, Transgenic, Survival Analysis, Tissue Transplantation, Toxoplasma immunology, Toxoplasmosis genetics, Toxoplasmosis mortality, Toxoplasmosis parasitology, Tumor Necrosis Factor-alpha genetics, Tumor Necrosis Factor-alpha immunology, Yersinia pseudotuberculosis immunology, Yersinia pseudotuberculosis Infections genetics, Yersinia pseudotuberculosis Infections microbiology, Yersinia pseudotuberculosis Infections mortality, Adipose Tissue, White transplantation, CD4-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes immunology, Immunologic Memory, Toxoplasmosis immunology, Yersinia pseudotuberculosis Infections immunology
- Abstract
White adipose tissue bridges body organs and plays a fundamental role in host metabolism. To what extent adipose tissue also contributes to immune surveillance and long-term protective defense remains largely unknown. Here, we have shown that at steady state, white adipose tissue contained abundant memory lymphocyte populations. After infection, white adipose tissue accumulated large numbers of pathogen-specific memory T cells, including tissue-resident cells. Memory T cells in white adipose tissue expressed a distinct metabolic profile, and white adipose tissue from previously infected mice was sufficient to protect uninfected mice from lethal pathogen challenge. Induction of recall responses within white adipose tissue was associated with the collapse of lipid metabolism in favor of antimicrobial responses. Our results suggest that white adipose tissue represents a memory T cell reservoir that provides potent and rapid effector memory responses, positioning this compartment as a potential major contributor to immunological memory., (Published by Elsevier Inc.)
- Published
- 2017
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37. The Mouse Model of Infection with Citrobacter rodentium.
- Author
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Bouladoux N, Harrison OJ, and Belkaid Y
- Subjects
- Animals, Bacterial Load, Colitis microbiology, Disease Models, Animal, Flow Cytometry, Host-Pathogen Interactions, Humans, Immunity, Mucosal, Intestinal Mucosa microbiology, Intestinal Mucosa pathology, Mice, Organ Culture Techniques, Citrobacter rodentium immunology, Colitis immunology, Enterobacteriaceae Infections immunology, Escherichia coli immunology, Escherichia coli Infections immunology, Intestinal Mucosa immunology
- Abstract
Citrobacter rodentium is a murine mucosal pathogen used as a model to elucidate the molecular and cellular pathogenesis of infection with two clinically important human gastrointestinal pathogens, enteropathogenic Escherichia coli (EPEC) and enterohaemorrhagic E. coli (EHEC). C. rodentium infection provides an excellent model to study different aspects of host-pathogen interaction in the gut, including intestinal inflammatory responses during bacteria-induced colitis, mucosal healing and epithelial repair, the induction of mucosal immune responses, and the role of the intestinal microbiota in mediating resistance to colonization by enteric pathogens. This unit provides detailed protocols for growing this bacterium, infecting mice by intragastric inoculation, measuring bacterial loads in feces and organs, and monitoring intestinal pathology induced by infection. Additional protocols describe steps needed to create frozen stocks, establish a growth curve, perform ex vivo organ cultures, isolate immune cells from the large intestine, and measure immune response by flow cytometry. © 2017 by John Wiley & Sons, Inc., (Copyright © 2017 John Wiley & Sons, Inc.)
- Published
- 2017
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38. Discovery of an O-mannosylation pathway selectively serving cadherins and protocadherins.
- Author
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Larsen ISB, Narimatsu Y, Joshi HJ, Siukstaite L, Harrison OJ, Brasch J, Goodman KM, Hansen L, Shapiro L, Honig B, Vakhrushev SY, Clausen H, and Halim A
- Subjects
- Carrier Proteins metabolism, Glycosylation, Glycosyltransferases metabolism, HEK293 Cells, Humans, Membrane Proteins metabolism, Multigene Family, Cadherins metabolism, Carrier Proteins genetics, Glycosyltransferases genetics, Mannose metabolism, Membrane Proteins genetics
- Abstract
The cadherin (cdh) superfamily of adhesion molecules carry O-linked mannose (O-Man) glycans at highly conserved sites localized to specific β-strands of their extracellular cdh (EC) domains. These O-Man glycans do not appear to be elongated like O-Man glycans found on α-dystroglycan (α-DG), and we recently demonstrated that initiation of cdh/protocadherin (pcdh) O-Man glycosylation is not dependent on the evolutionary conserved POMT1/POMT2 enzymes that initiate O-Man glycosylation on α-DG. Here, we used a CRISPR/Cas9 genetic dissection strategy combined with sensitive and quantitative O-Man glycoproteomics to identify a homologous family of four putative protein O-mannosyltransferases encoded by the TMTC1-4 genes, which were found to be imperative for cdh and pcdh O-Man glycosylation. KO of all four TMTC genes in HEK293 cells resulted in specific loss of cdh and pcdh O-Man glycosylation, whereas combined KO of TMTC1 and TMTC3 resulted in selective loss of O-Man glycans on specific β-strands of EC domains, suggesting that each isoenzyme serves a different function. In addition, O-Man glycosylation of IPT/TIG domains of plexins and hepatocyte growth factor receptor was not affected in TMTC KO cells, suggesting the existence of yet another O-Man glycosylation machinery. Our study demonstrates that regulation of O-mannosylation in higher eukaryotes is more complex than envisioned, and the discovery of the functions of TMTCs provide insight into cobblestone lissencephaly caused by deficiency in TMTC3., Competing Interests: The authors declare no conflict of interest.
- Published
- 2017
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39. Mammalian O -mannosylation of cadherins and plexins is independent of protein O -mannosyltransferases 1 and 2.
- Author
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Larsen ISB, Narimatsu Y, Joshi HJ, Yang Z, Harrison OJ, Brasch J, Shapiro L, Honig B, Vakhrushev SY, Clausen H, and Halim A
- Subjects
- Animals, CHO Cells, Cadherins genetics, Cell Adhesion Molecules genetics, Cricetinae, Cricetulus, Glycosylation, HEK293 Cells, Humans, Mannosyltransferases genetics, Nerve Tissue Proteins genetics, Cadherins metabolism, Cell Adhesion Molecules metabolism, Dystroglycans metabolism, Mannosyltransferases metabolism, Nerve Tissue Proteins metabolism
- Abstract
Protein O- mannosylation is found in yeast and metazoans, and a family of conserved orthologous protein O- mannosyltransferases is believed to initiate this important post-translational modification. We recently discovered that the cadherin superfamily carries O- linked mannose ( O -Man) glycans at highly conserved residues in specific extracellular cadherin domains, and it was suggested that the function of E-cadherin was dependent on the O- Man glycans. Deficiencies in enzymes catalyzing O- Man biosynthesis, including the two human protein O- mannosyltransferases, POMT1 and POMT2, underlie a subgroup of congenital muscular dystrophies designated α-dystroglycanopathies, because deficient O- Man glycosylation of α-dystroglycan disrupts laminin interaction with α-dystroglycan and the extracellular matrix. To explore the functions of O- Man glycans on cadherins and protocadherins, we used a combinatorial gene-editing strategy in multiple cell lines to evaluate the role of the two POMTs initiating O- Man glycosylation and the major enzyme elongating O- Man glycans, the protein O- mannose β-1,2- N -acetylglucosaminyltransferase, POMGnT1. Surprisingly, O- mannosylation of cadherins and protocadherins does not require POMT1 and/or POMT2 in contrast to α-dystroglycan, and moreover, the O- Man glycans on cadherins are not elongated. Thus, the classical and evolutionarily conserved POMT O- mannosylation pathway is essentially dedicated to α-dystroglycan and a few other proteins, whereas a novel O- mannosylation process in mammalian cells is predicted to serve the large cadherin superfamily and other proteins., (© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.)
- Published
- 2017
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40. Staphylococcus aureus and Staphylococcus epidermidis strain diversity underlying pediatric atopic dermatitis.
- Author
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Byrd AL, Deming C, Cassidy SKB, Harrison OJ, Ng WI, Conlan S, Belkaid Y, Segre JA, and Kong HH
- Subjects
- Animals, Case-Control Studies, Child, Dermatitis, Atopic immunology, Dermatitis, Atopic pathology, Disease Models, Animal, Disease Progression, Female, Humans, Mice, Inbred C57BL, Severity of Illness Index, Dermatitis, Atopic microbiology, Staphylococcus aureus physiology, Staphylococcus epidermidis physiology
- Abstract
The heterogeneous course, severity, and treatment responses among patients with atopic dermatitis (AD; eczema) highlight the complexity of this multifactorial disease. Prior studies have used traditional typing methods on cultivated isolates or sequenced a bacterial marker gene to study the skin microbial communities of AD patients. Shotgun metagenomic sequence analysis provides much greater resolution, elucidating multiple levels of microbial community assembly ranging from kingdom to species and strain-level diversification. We analyzed microbial temporal dynamics from a cohort of pediatric AD patients sampled throughout the disease course. Species-level investigation of AD flares showed greater Staphylococcus aureus predominance in patients with more severe disease and Staphylococcus epidermidis predominance in patients with less severe disease. At the strain level, metagenomic sequencing analyses demonstrated clonal S. aureus strains in more severe patients and heterogeneous S. epidermidis strain communities in all patients. To investigate strain-level biological effects of S. aureus , we topically colonized mice with human strains isolated from AD patients and controls. This cutaneous colonization model demonstrated S. aureus strain-specific differences in eliciting skin inflammation and immune signatures characteristic of AD patients. Specifically, S. aureus isolates from AD patients with more severe flares induced epidermal thickening and expansion of cutaneous T helper 2 (T
H 2) and TH 17 cells. Integrating high-resolution sequencing, culturing, and animal models demonstrated how functional differences of staphylococcal strains may contribute to the complexity of AD disease., (Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)- Published
- 2017
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41. Homeostatic Immunity and the Microbiota.
- Author
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Belkaid Y and Harrison OJ
- Subjects
- Animals, Host-Pathogen Interactions immunology, Humans, Immune System microbiology, Immune Tolerance immunology, Microbiota physiology, Models, Immunological, Adaptive Immunity immunology, Homeostasis immunology, Immune System immunology, Immunity, Innate immunology, Microbiota immunology
- Abstract
The microbiota plays a fundamental role in the induction, education, and function of the host immune system. In return, the host immune system has evolved multiple means by which to maintain its symbiotic relationship with the microbiota. The maintenance of this dialogue allows the induction of protective responses to pathogens and the utilization of regulatory pathways involved in the sustained tolerance to innocuous antigens. The ability of microbes to set the immunological tone of tissues, both locally and systemically, requires tonic sensing of microbes and complex feedback loops between innate and adaptive components of the immune system. Here we review the dominant cellular mediators of these interactions and discuss emerging themes associated with our current understanding of the homeostatic immunological dialogue between the host and its microbiota., (Published by Elsevier Inc.)
- Published
- 2017
- Full Text
- View/download PDF
42. Endogenous Reference Genes for Gene Expression Studies on Bicuspid Aortic Valve Associated Aortopathy in Humans.
- Author
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Harrison OJ, Moorjani N, Torrens C, Ohri SK, and Cagampang FR
- Subjects
- Actins genetics, Actins metabolism, Adult, Age Factors, Aged, Algorithms, Aorta physiology, Aortic Valve metabolism, Bicuspid Aortic Valve Disease, Female, Gene Expression, Glyceraldehyde-3-Phosphate Dehydrogenases genetics, Glyceraldehyde-3-Phosphate Dehydrogenases metabolism, Heart Valve Diseases diagnosis, Heart Valve Diseases metabolism, Humans, Male, Middle Aged, RNA isolation & purification, RNA metabolism, Sex Factors, Ubiquitin C genetics, Ubiquitin C metabolism, Aortic Valve abnormalities, Gene Expression Profiling methods, Genes, Essential, Heart Valve Diseases genetics
- Abstract
Bicuspid aortic valve (BAV) disease is the most common congenital cardiac abnormality and predisposes patients to life-threatening aortic complications including aortic aneurysm. Quantitative real-time reverse transcription PCR (qRT-PCR) is one of the most commonly used methods to investigate underlying molecular mechanisms involved in aortopathy. The accuracy of the gene expression data is dependent on normalization by appropriate housekeeping (HK) genes, whose expression should remain constant regardless of aortic valve morphology, aortic diameter and other factors associated with aortopathy. Here, we identified an appropriate set of HK genes to be used as endogenous reference for quantifying gene expression in ascending aortic tissue using a spin column-based RNA extraction method. Ascending aortic biopsies were collected intra-operatively from patients undergoing aortic valve and/or ascending aortic surgery. These patients had BAV or tricuspid aortic valve (TAV), and the aortas were either dilated (≥4.5cm) or undilated. The cohort had an even distribution of gender, valve disease and hypertension. The expression stability of 12 reference genes were investigated (ATP5B, ACTB, B2M, CYC1, EIF4A2, GAPDH, SDHA, RPL13A, TOP1, UBC, YWHAZ, and 18S) using geNorm software. The most stable HK genes were found to be GAPDH, UBC and ACTB. Both GAPDH and UBC demonstrated relative stability regardless of valve morphology, aortic diameter, gender and age. The expression of B2M and SDHA were found to be the least stable HK genes. We propose the use of GAPDH, UBC and ACTB as reference genes for gene expression studies of BAV aortopathy using ascending aortic tissue., Competing Interests: PrimerDesign UK provided funding in form of Gold Sponsorship of OH and provided geNorm kit free of charge. This does not alter our adherence to PLOS ONE policies on sharing data and materials.
- Published
- 2016
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43. Critical role of fatty acid metabolism in ILC2-mediated barrier protection during malnutrition and helminth infection.
- Author
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Wilhelm C, Harrison OJ, Schmitt V, Pelletier M, Spencer SP, Urban JF Jr, Ploch M, Ramalingam TR, Siegel RM, and Belkaid Y
- Subjects
- Animals, Helminthiasis genetics, Helminthiasis parasitology, Interleukin-13 immunology, Malnutrition genetics, Malnutrition parasitology, Mice, Mice, Knockout, Fatty Acids immunology, Helminthiasis immunology, Immunity, Innate, Lymphocytes immunology, Malnutrition immunology
- Abstract
Innate lymphoid cells (ILC) play an important role in many immune processes, including control of infections, inflammation, and tissue repair. To date, little is known about the metabolism of ILC and whether these cells can metabolically adapt in response to environmental signals. Here we show that type 2 innate lymphoid cells (ILC2), important mediators of barrier immunity, predominantly depend on fatty acid (FA) metabolism during helminth infection. Further, in situations where an essential nutrient, such as vitamin A, is limited, ILC2 sustain their function and selectively maintain interleukin 13 (IL-13) production via increased acquisition and utilization of FA. Together, these results reveal that ILC2 preferentially use FAs to maintain their function in the context of helminth infection or malnutrition and propose that enhanced FA usage and FA-dependent IL-13 production by ILC2 could represent a host adaptation to maintain barrier immunity under dietary restriction.
- Published
- 2016
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44. Structural basis of adhesive binding by desmocollins and desmogleins.
- Author
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Harrison OJ, Brasch J, Lasso G, Katsamba PS, Ahlsen G, Honig B, and Shapiro L
- Subjects
- Adhesives metabolism, Desmocollins metabolism, Desmogleins metabolism, Dimerization, Humans, Kinetics, Protein Conformation, Adhesives chemistry, Desmocollins chemistry, Desmogleins chemistry
- Abstract
Desmosomes are intercellular adhesive junctions that impart strength to vertebrate tissues. Their dense, ordered intercellular attachments are formed by desmogleins (Dsgs) and desmocollins (Dscs), but the nature of trans-cellular interactions between these specialized cadherins is unclear. Here, using solution biophysics and coated-bead aggregation experiments, we demonstrate family-wise heterophilic specificity: All Dsgs form adhesive dimers with all Dscs, with affinities characteristic of each Dsg:Dsc pair. Crystal structures of ectodomains from Dsg2 and Dsg3 and from Dsc1 and Dsc2 show binding through a strand-swap mechanism similar to that of homophilic classical cadherins. However, conserved charged amino acids inhibit Dsg:Dsg and Dsc:Dsc interactions by same-charge repulsion and promote heterophilic Dsg:Dsc interactions through opposite-charge attraction. These findings show that Dsg:Dsc heterodimers represent the fundamental adhesive unit of desmosomes and provide a structural framework for understanding desmosome assembly.
- Published
- 2016
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45. T-bet is a key modulator of IL-23-driven pathogenic CD4(+) T cell responses in the intestine.
- Author
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Krausgruber T, Schiering C, Adelmann K, Harrison OJ, Chomka A, Pearson C, Ahern PP, Shale M, Oukka M, and Powrie F
- Subjects
- Animals, Disease Models, Animal, Female, Interleukin-17 metabolism, Interleukins metabolism, Male, Mice, Inbred C57BL, Nuclear Receptor Subfamily 1, Group F, Member 3 metabolism, Receptors, Interleukin metabolism, Interleukin-22, CD4-Positive T-Lymphocytes physiology, Colitis immunology, Interleukin-23 metabolism, Intestines immunology, T-Box Domain Proteins metabolism
- Abstract
IL-23 is a key driver of pathogenic Th17 cell responses. It has been suggested that the transcription factor T-bet is required to facilitate IL-23-driven pathogenic effector functions; however, the precise role of T-bet in intestinal T cell responses remains elusive. Here, we show that T-bet expression by T cells is not required for the induction of colitis or the differentiation of pathogenic Th17 cells but modifies qualitative features of the IL-23-driven colitogenic response by negatively regulating IL-23R expression. Consequently, absence of T-bet leads to unrestrained Th17 cell differentiation and activation characterized by high amounts of IL-17A and IL-22. The combined increase in IL-17A/IL-22 results in enhanced epithelial cell activation and inhibition of either IL-17A or IL-22 leads to disease amelioration. Our study identifies T-bet as a key modulator of IL-23-driven colitogenic responses in the intestine and has important implications for understanding of heterogeneity among inflammatory bowel disease patients.
- Published
- 2016
- Full Text
- View/download PDF
46. The autophagy gene Atg16l1 differentially regulates Treg and TH2 cells to control intestinal inflammation.
- Author
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Kabat AM, Harrison OJ, Riffelmacher T, Moghaddam AE, Pearson CF, Laing A, Abeler-Dörner L, Forman SP, Grencis RK, Sattentau Q, Simon AK, Pott J, and Maloy KJ
- Subjects
- Animals, Autophagy-Related Proteins, Carrier Proteins genetics, Gene Deletion, Mice, Mice, Knockout, Carrier Proteins metabolism, Inflammatory Bowel Diseases pathology, T-Lymphocytes, Regulatory immunology, Th2 Cells immunology
- Abstract
A polymorphism in the autophagy gene Atg16l1 is associated with susceptibility to inflammatory bowel disease (IBD); however, it remains unclear how autophagy contributes to intestinal immune homeostasis. Here, we demonstrate that autophagy is essential for maintenance of balanced CD4(+) T cell responses in the intestine. Selective deletion of Atg16l1 in T cells in mice resulted in spontaneous intestinal inflammation that was characterized by aberrant type 2 responses to dietary and microbiota antigens, and by a loss of Foxp3(+) Treg cells. Specific ablation of Atg16l1 in Foxp3(+) Treg cells in mice demonstrated that autophagy directly promotes their survival and metabolic adaptation in the intestine. Moreover, we also identify an unexpected role for autophagy in directly limiting mucosal TH2 cell expansion. These findings provide new insights into the reciprocal control of distinct intestinal TH cell responses by autophagy, with important implications for understanding and treatment of chronic inflammatory disorders.
- Published
- 2016
- Full Text
- View/download PDF
47. Reconciling diverse mammalian pigmentation patterns with a fundamental mathematical model.
- Author
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Mort RL, Ross RJH, Hainey KJ, Harrison OJ, Keighren MA, Landini G, Baker RE, Painter KJ, Jackson IJ, and Yates CA
- Subjects
- Animals, Embryo, Mammalian physiology, Mice, Models, Biological, Skin metabolism, Tissue Culture Techniques, Pigments, Biological physiology
- Abstract
Bands of colour extending laterally from the dorsal to ventral trunk are a common feature of mouse chimeras. These stripes were originally taken as evidence of the directed dorsoventral migration of melanoblasts (the embryonic precursors of melanocytes) as they colonize the developing skin. Depigmented 'belly spots' in mice with mutations in the receptor tyrosine kinase Kit are thought to represent a failure of this colonization, either due to impaired migration or proliferation. Tracing of single melanoblast clones, however, has revealed a diffuse distribution with high levels of axial mixing--hard to reconcile with directed migration. Here we construct an agent-based stochastic model calibrated by experimental measurements to investigate the formation of diffuse clones, chimeric stripes and belly spots. Our observations indicate that melanoblast colonization likely proceeds through a process of undirected migration, proliferation and tissue expansion, and that reduced proliferation is the cause of the belly spots in Kit mutants.
- Published
- 2016
- Full Text
- View/download PDF
48. Epithelial-derived IL-18 regulates Th17 cell differentiation and Foxp3⁺ Treg cell function in the intestine.
- Author
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Harrison OJ, Srinivasan N, Pott J, Schiering C, Krausgruber T, Ilott NE, and Maloy KJ
- Subjects
- Animals, Blotting, Western, Cell Differentiation immunology, Cell Separation, Disease Models, Animal, Fluorescent Antibody Technique, Forkhead Transcription Factors immunology, Immunity, Mucosal immunology, Intestines immunology, Lymphocyte Activation immunology, Mice, Mice, Inbred C57BL, Mice, Knockout, Oligonucleotide Array Sequence Analysis, Colitis immunology, Interleukin-18 immunology, Intestinal Mucosa immunology, T-Lymphocytes, Regulatory immunology, Th17 Cells immunology
- Abstract
Elevated levels of interleukin-18 (IL-18) are found in many chronic inflammatory disorders, including inflammatory bowel disease (IBD), and polymorphisms in the IL18R1-IL18RAP locus are associated with IBD susceptibility. IL-18 is an IL-1 family cytokine that has been proposed to promote barrier function in the intestine, but the effects of IL-18 on intestinal CD4(+) T cells are poorly understood. Here we demonstrate that IL-18R1 expression is enhanced on both effector and regulatory CD4(+) T cells in the intestinal lamina propria, with T helper type 17 (Th17) cells exhibiting particularly high levels. We further show that, during steady state, intestinal epithelial cells constitutively secrete IL-18 that acts directly on IL-18R1-expressing CD4(+) T cells to limit colonic Th17 cell differentiation, in part by antagonizing IL-1R1 signaling. In addition, although IL-18R1 is not required for colonic Foxp3(+) regulatory T (Treg) cell differentiation, we found that IL-18R1 signaling was critical for Foxp3(+) Treg cell-mediated control of intestinal inflammation, where it promoted the expression of key Treg effector molecules. Thus IL-18 is a key epithelial-derived cytokine that differentially regulates distinct subsets of intestinal CD4(+) T cells during both homeostatic and inflammatory conditions, a finding with potential implications for treatment of chronic inflammatory disorders.
- Published
- 2015
- Full Text
- View/download PDF
49. Microbiota-Dependent Sequelae of Acute Infection Compromise Tissue-Specific Immunity.
- Author
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Fonseca DM, Hand TW, Han SJ, Gerner MY, Glatman Zaretsky A, Byrd AL, Harrison OJ, Ortiz AM, Quinones M, Trinchieri G, Brenchley JM, Brodsky IE, Germain RN, Randolph GJ, and Belkaid Y
- Subjects
- Cell Movement, Chronic Disease, Dendritic Cells pathology, Female, Humans, Lymphatic Diseases microbiology, Lymphoid Tissue immunology, Lymphoid Tissue pathology, Male, Mesentery immunology, Mesentery pathology, Specific Pathogen-Free Organisms, Yersinia pseudotuberculosis Infections pathology, Gastrointestinal Microbiome, Immune System Diseases microbiology, Immune System Diseases pathology, Lymphatic Diseases pathology, Yersinia pseudotuberculosis physiology, Yersinia pseudotuberculosis Infections immunology
- Abstract
Infections have been proposed as initiating factors for inflammatory disorders; however, identifying associations between defined infectious agents and the initiation of chronic disease has remained elusive. Here, we report that a single acute infection can have dramatic and long-term consequences for tissue-specific immunity. Following clearance of Yersinia pseudotuberculosis, sustained inflammation and associated lymphatic leakage in the mesenteric adipose tissue deviates migratory dendritic cells to the adipose compartment, thereby preventing their accumulation in the mesenteric lymph node. As a consequence, canonical mucosal immune functions, including tolerance and protective immunity, are persistently compromised. Post-resolution of infection, signals derived from the microbiota maintain inflammatory mesentery remodeling and consequently, transient ablation of the microbiota restores mucosal immunity. Our results indicate that persistent disruption of communication between tissues and the immune system following clearance of an acute infection represents an inflection point beyond which tissue homeostasis and immunity is compromised for the long-term. VIDEO ABSTRACT., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
50. E-cadherin junction formation involves an active kinetic nucleation process.
- Author
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Biswas KH, Hartman KL, Yu CH, Harrison OJ, Song H, Smith AW, Huang WY, Lin WC, Guo Z, Padmanabhan A, Troyanovsky SM, Dustin ML, Shapiro L, Honig B, Zaidel-Bar R, and Groves JT
- Subjects
- Biophysics, Cell Line, Cytoskeleton metabolism, Humans, Kinetics, Lipid Bilayers, Signal Transduction, Cadherins metabolism, Intercellular Junctions
- Abstract
Epithelial (E)-cadherin-mediated cell-cell junctions play important roles in the development and maintenance of tissue structure in multicellular organisms. E-cadherin adhesion is thus a key element of the cellular microenvironment that provides both mechanical and biochemical signaling inputs. Here, we report in vitro reconstitution of junction-like structures between native E-cadherin in living cells and the extracellular domain of E-cadherin (E-cad-ECD) in a supported membrane. Junction formation in this hybrid live cell-supported membrane configuration requires both active processes within the living cell and a supported membrane with low E-cad-ECD mobility. The hybrid junctions recruit α-catenin and exhibit remodeled cortical actin. Observations suggest that the initial stages of junction formation in this hybrid system depend on the trans but not the cis interactions between E-cadherin molecules, and proceed via a nucleation process in which protrusion and retraction of filopodia play a key role., Competing Interests: The authors declare no conflict of interest.
- Published
- 2015
- Full Text
- View/download PDF
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