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Tropical deep reefs (>30 m) are biologically and ecologically unique ecosystems with a higher geographic reach to shallow (

International audience; A dynamic model has been developed to represent biogeochemical variables and processes observed during a bloom of Emiliania huxleyi coccolithophore. This bloom was induced in a mesocosm experiment during which the ecosystem development was followed over a period of 23-days through changes in various biogeochemical parameters such as inorganic nutrients (nitrate, ammonium and phosphate), total alkalinity (TA), dissolved inorganic carbon (DIC), partial pressure of CO2 (pCO2), dissolved oxygen (O2), photosynthetic pigments, particulate organic carbon (POC), dissolved organic carbon (DOC), Transparent Exopolymer Particles (TEP), primary production, and calcification. This dynamic model is based on unbalanced algal growth and balanced bacterial growth. In order to adequately reproduce the observations, the model includes an explicit description of phosphorus cycling, calcification, TEP production and an enhanced mortality due to viral lysis. The model represented carbon, nitrogen and phosphorus fluxes observed in the mesocosms. Modelled profiles of algal biomass and final concentrations of DIC and nutrients are in agreement with the experimental observations.

Coastal areas are impacted by multiple natural and anthropogenic processes and experience stronger pH fluctuations than the open ocean. These variations can weaken or intensify the ocean acidification signal induced by increasing atmospheric pCO2. The development of eutrophication-induced hypoxia intensifies coastal acidification, since the CO2 produced during respiration decreases the buffering capacity in any hypoxic bottom water. To assess the combined ecosystem impacts of acidification and hypoxia, we quantified the seasonal variation in pH and oxygen dynamics in the water column of a seasonally stratified coastal basin (Lake Grevelingen, the Netherlands). Monthly water-column chemistry measurements were complemented with estimates of primary production and respiration using O2 light–dark incubations, in addition to sediment–water fluxes of dissolved inorganic carbon (DIC) and total alkalinity (TA). The resulting data set was used to set up a proton budget on a seasonal scale. Temperature-induced seasonal stratification combined with a high community respiration was responsible for the depletion of oxygen in the bottom water in summer. The surface water showed strong seasonal variation in process rates (primary production, CO2 air–sea exchange), but relatively small seasonal pH fluctuations (0.46 units on the total hydrogen ion scale). In contrast, the bottom water showed less seasonality in biogeochemical rates (respiration, sediment–water exchange), but stronger pH fluctuations (0.60 units). This marked difference in pH dynamics could be attributed to a substantial reduction in the acid–base buffering capacity of the hypoxic bottom water in the summer period. Our results highlight the importance of acid–base buffering in the pH dynamics of coastal systems and illustrate the increasing vulnerability of hypoxic, CO2-rich waters to any acidifying process.

International audience; The SPOT station (168°E-20°S,-4500 m) is a recent deep-sea and multidisciplinary marine research observation station whose objective is to establish the first long-time series of basic parameters in the South West Pacific. The primary studies concern the biodiversity, the productivity of key Plankton Functional Types, the biogeochemistry of carbon and nitrogen cycles, and their impact on the reef and coastal ecosystems' productivity. SPOT station is based on the same philosophy of long-lasting observation as HOT (Hawaii Ocean Time-series). The data will be used to describe and understand the seasonal and long-term variations of the SouthWest Pacific ecosystem related to ENSO (El Niño Southern Oscillation).

In coastal waters, a purely field observation based approach will probably be insufficient to better constrain estimates of air-sea CO2 fluxes, to study their inter-annual variability and their long-term changes. One approach to achieve these goals is to use remotely sensed fields of relevant biogeochemical variables to extrapolate available data, and produce maps of the partial pressure of CO2 (pCO2) and air-sea CO2 fluxes. In the open ocean this approach has to some extent been successfully used based on fields of chlorophyll-a (Chl-a) and sea surface temperature (SST). This approach remains challenging in coastal waters that have complex optical properties (Case-II waters) and that exhibit highly dynamic pCO2 temporal and spatial variations. In the frame of the Belgian funded BELCOLOUR-II project (Optical remote sensing of marine, coastal and inland waters; http://www.mumm.ac.be/BELCOLOUR/), three field cruises per year (April, July and September) for optical measurements were carried in 2007, 2008, 2009 in the Southern Bight of the North Sea (SBNS). Based on these data-sets, we derived algorithms to compute pCO2 from Chl-a and sea surface salinity (SSS) using multi-polynomial regressions (MPR). Here we report the first application of the MPR algorithms to derive pCO2 fields in the Belgian coastal zone based on data gathered in 2007, using remote sensed Chl-a (MERIS) and SSS computed with a 3-D hydrodynamical model of SBNS (COHERENS).

In coastal waters, a purely field observation based approach will probably be insufficient to better constrain estimates of air-sea CO2 fluxes, to study their inter-annual variability and their long-term changes. One approach to achieve these goals is to use remotely sensed fields of relevant biogeochemical variables to extrapolate available data, and produce maps of the partial pressure of CO2 (pCO2) and air-sea CO2 fluxes. In the open ocean this approach has to some extent been successfully used based on fields of chlorophyll-a (Chla) and sea surface temperature (SST). This approach remains challenging in coastal waters that have complex optical properties (Case-II waters) and that exhibit highly dynamic pCO2 temporal and spatial variations. In the frame of the Belgian funded BELCOLOUR-II project (Optical remote sensing of marine, coastal and inland waters; http://www.mumm.ac.be/BELCOLOUR/), three field cruises per year (April, July and September) for optical measurements were carried in 2007, 2008, 2009 in the Southern Bight of the North Sea (SBNS). Based on these data-sets, we derived algorithms to compute pCO2 from Chl-a and sea surface salinity (SSS) using multipolynomial regressions (MPR). Here we report the first application of the MPR algorithms to derive pCO2 fields in the Belgian coastal zone based on data gathered in 2007, using remote sensed Chl-a (MERIS) and SSS computed with a 3-D hydrodynamical model of SBNS (COHERENS).

We report a data set of dissolved inorganic carbon (DIC) obtained during three cruises in the northern Bay of Biscay carried out in June 2006, May 2007, and May 2008. During these cruises, blooms of the coccolithophore Emiliania huxleyi occurred, as indicated by patches of high reflectance on remote sensing images, phytoplankton pigment signatures, and microscopic examinations. Total alkalinity showed a nonconservative behavior as a function of salinity due to the cumulative effect of net community calcification (NCC) on seawater carbonate chemistry during bloom development. The cumulative effect of NCC and net community production (NCP) on DIC and the partial pressure of CO2 (pCO2) were evaluated. The decrease of DIC (and increase of pCO2) due to NCC was overwhelmingly lower than the decrease of DIC (and decrease of pCO2) due to NCP (NCC:NCP « 1). During the cruises, the northern Bay of Biscay acted as a sink of atmospheric CO2 (on average ~-9.7 mmol C m-2 d-1 for the three cruises). The overall effect of NCC in decreasing the CO2 sink during the cruises was low (on average ~12% of total air-sea CO2 flux). If this is a general feature in naturally occurring phytoplankton blooms in the North Atlantic Ocean (where blooms of coccolithophores are the most intense and recurrent), and in the global ocean, then the potential feedback on increasing atmospheric CO2 of the projected decrease of pelagic calcification due to thermodynamic CO2 “production” from calcification is probably minor compared to potential feedbacks related to changes of NCP.

The production of organic matter and calcium carbonate by a dense population of the brittle star Acrocnida brachiata (Echinodermata) was calculated using demographic structure, population density, and relations between the size (disk diameter) and the ash-free dry weight (AFDW) or the calcimass. During a 2-year survey in the Bay of Seine (Eastern English Channel, France), organic production varied from 29 to 50 g(AFDW) m-2 year-1 and CaCO3 production from 69 to 104 g(CaCO3) m-2 year-1. Respiration was estimated between 1.7 and 2.0 mol(CO2) m-2 year-1. Using the molar ratio (psi) of CO2 released: CaCO3 precipitated, this biogenic precipitation of calcium carbonate would result in an additional release between 0.5 and 0.7 mol(CO2) m-2 year-1 that represented 23% and 26% of total CO2 fluxes (sum of calcification and respiration). The results of the present study suggest that calcification in temperate shallow environments should be considered as a significant source of CO2 to seawater and thus a potential source of CO2 to the atmosphere, emphasizing the important role of the biomineralization (estimated here) and dissolution (endoskeletons of dead individuals) in the carbon budget of temperate coastal ecosystems.

Coccolithophores (Prymnesiophyceae) such as Emiliania huxleyi belong to the most productive calcifying organisms in the oceans. During two consecutive years we assessed bacterial diversity and dynamics during the course of spring phytoplankton blooms dominated by coccolithophores in the northern part of the Bay of Biscay. Bacterioplankton community composition was assessed by means of denaturing gradient gel electrophoresis (DGGE) in combination with 16S rRNA gene clone libraries. We used ordination analysis to relate bacterioplankton community dynamics to phytoplankton pigment data and environmental parameters (nutrient concentrations, total alkalinity, concentration of transparent exopolymeric particles (TEP), pCO2). We found a clear difference in composition between the free-living and the particle-associated bacterial assemblage, with the identified Flavobacteria and Sphingobacteria phylotypes being characteristic for the particle-associated bacterial assemblage and Alfaproteobacteria and members of the SAR86 cluster dominating the free-living bacterial assemblage. Stations along the continental margin, at different stages in the coccolithophore bloom, were characterized by distinct bacterial assemblages which correlated well with changes in phytoplankton community composition and TEP abundance. We hypothesize that coccolithophore bloom dynamics shape both the free-living and the particle associated bacterial assemblages through phytoplankton group-specific associations and TEP production

We studied the direct effects of CO2 and related changes in seawater carbonate chemistry on marine planktonic organisms in a mesocosm experiment. In nine outdoor enclosures (similar to 11 m3 each), the partial pressure of CO2 (pCO2) in the seawater was modified by an aeration system. The triplicate mesocosm treatments represented low (similar to 190 parts per million by volume (ppmV) CO2), present (similar to 410 ppmV CO2), and high (similar to 710 ppmV CO2) pCO2 conditions. After initial fertilization with nitrate and phosphate a bloom dominated by the coccolithophorid Emiliania huxleyi occurred simultaneously in all of the nine mesocosms; it was monitored over a 19-day period, The three CO2 treatments assimilated nitrate and phosphate similarly. The concentration of particulate constituents was highly variable among the replicate mesocosms, disguising direct CO2-related effects. Normalization of production rates within each treatment, however, indicated that the net specific growth rate of E. huxleyi, the rate of calcification per cell, and the elemental stoichiometry of uptake and production processes were sensitive to changes in pCO2. This broad influence of CO2 on the E. huxleyi bloom suggests that changes in CO2 concentration directly affect cell physiology with likely effects on the marine biogeochemistry.

Primary production and calcification in response to different partial pressures of CO2 (PCO2) (“glacial,” “present,” and “year 2100” atmospheric CO2 concentrations) were investigated during a mesocosm bloom dominated by the coccolithophorid Emiliania huxleyi. The day-to-day dynamics of net community production (NCP) and net community calcification (NCC) were assessed during the bloom development and decline by monitoring dissolved inorganic carbon (DIC) and total alkalinity (TA), together with oxygen production and 14C incorporation. When comparing year 2100 with glacial PCO2 conditions we observed: (1) no conspicuous change of net community productivity (NCPy); (2) a delay in the onset of calcification by 24 to 48 hours, reducing the duration of the calcifying phase in the course of the bloom; (3) a 40% decrease of NCC; and (4) enhanced loss of organic carbon from the water column. These results suggest a shift in the ratio of organic carbon to calcium carbonate production and vertical flux with rising atmospheric PCO2.

Precipitation of calcium carbonate by phytoplankton in the photic oceanic layer is an important process regulating the carbon cycling and the exchange Of CO2 at the ocean-atmosphere interface. Previous experiments have demonstrated that, under nutrient-sufficient conditions, doubling the partial pressure Of CO2 (pCO2) in seawater-a likely scenario for the end of the century-can significantly decrease both the rate of calcification by coccolithophorids and the ratio of inorganic to organic carbon production. The present work investigates the effects of high pCO2 on calcification by the coccolithophore Emiliania huxleyi (Strain TW1) grown under nitrogen-limiting conditions, a situation that can also prevail in the ocean. Nitrogen limitation was achieved in NO3-limited continuous cultures renewed at the rate of 0.5 d-1 and exposed to a saturating light level. pCO2 was increased from 400 to 700 ppm and controlled by bubbling CO2-rich or CO2-free air into the cultures. The pCO2 shift has a rapid effect on cell physiology that occurs within 2 cell divisions subsequent to the perturbation. Net calcification rate (C) decreased by 25% and, in contrast to previous studies with N-replete cultures, gross community production (GCP) and dark community respiration (DCR) also decreased. These results suggest that increasing pCO2 has no noticeable effect on the calcification/photosynthesis ratio (C/P) when cells of E. huxleyi are NO3-limited.