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2. POPULATION HISTORY AND GENETIC STRUCTURE IN THE WESTERN ATLANTIC SURFCLAM SUBSPECIES (SPISULA SOLIDISSIMA SPP.)

5. CONSEQUENCES OF SALINITY CHANGE, SALINITY HISTORY, AND SHELL MORPHOLOGY ON EARLY GROWTH OF JUVENILE OYSTERS

8. Development and Evaluation of High-Density SNP Arrays for the Eastern Oyster Crassostrea virginica

19. Comparison of genetic and visual identification of cisco and lake whitefish larvae from Chaumont Bay, Lake Ontario

24. Table S8. Microbiome Faith's Phylogenetic Diversity model results. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

25. Table S10. Microbiome diversity PERMANOVA results. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

26. Table S1. Differentially expressed genes (DEG) of hellbender salamanders following experimental vaccination and infection of Bd. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

27. Table S11. Microbial Biological Process functions only observed after Bd infection. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

28. Table S2. Differentially expressed genes (DEGs) of Bd in early and late infection of hellbender salamanders. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

29. Figure S3. Principal components analysis of all prokaryote genes. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

30. Table S5. Hellbender skin immune DEGs by experimental group and time point. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

31. Table S7. Hellbender MHC expression model summary. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

32. Table S9. Hellbender skin microbial diversity is not affected by vaccination or Bd infection. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

33. Table S4. Hellbender skin transcriptome read counts. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

34. Figure S2. Anti-Bd OTU richness does not alter Bd load in early or late infection. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

35. Figure S1. Principal components analysis of all hellbender genes. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

36. Table S3. ANOVA summary table of Bd AUDPC linear mixed effects model. from Immune priming prior to pathogen exposure sheds light on the relationship between host, microbiome and pathogen in disease

39. Nucleotide and structural polymorphisms of the eastern oyster genome paint a mosaic of divergence, selection, and human impacts

45. Does a complex life cycle affect adaptation to environmental change? Genome-informed insights for characterizing selection across complex life cycle

46. Microsatellite genotypes reveal some long-distance gene flow in Perkinsus marines, a major pathogen of the eastern oyster, Crassostrea virginica (Gmelin)

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