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Abstract Stress can lead to gut dysbiosis in brain-gut axis disordered diseases as irritable bowel syndrome (IBS), yet the mechanisms how stress transfer from the brain to the gut and disrupt gut microbiota remain elusive. Here we describe a stress-responsive brain-to-gut axis which impairs colonocytes’ mitochondria to trigger gut dysbiosis. Patients with IBS exhibit significantly increased facultative anaerobes and decreased obligate anaerobes, related to increased serum corticotropin-releasing hormone (CRH) level and defected colonocytes’ mitochondria ultrastructure. Mice exposed to acute stress experienced enhanced CRH-CRH receptor type 1 (CRHR1) signaling, which impaired mitochondria and epithelium hypoxia in the colon, subsequently triggered gut dysbiosis. Antagonizing CRHR1 expression to inhibit cAMP/Ras/MAPK signaling or activating mitochondria respiration conferred resilience against stress-induced mitochondria damaging and epithelium hypoxia impairment, ultimately improving gut dysbiosis. These results suggest that the CRH-CRHR1-mitochondria pathway plays a pivotal role in stress-induced gut dysbiosis that could be therapeutically targeted for stress-induced gastrointestinal diseases. Yiming Zhang et.al report that psychological stress activated Corticotropin-releasing hormone (CRH)-CRH receptor type 1 (CRHR1)-mitochondria pathway to trigger gut dysbiosis and reveal CRHR1 upregulation damages mitochondria via cAMP/Ras/MAPK signaling in colonocytes.

Protein level of Histo-Blood Group ABO System Transferase (BGAT) has been reported to be associated with cardiometabolic diseases. But its effect on pregnancy related outcomes still remains unclear. Here we conducted a two-sample Mendelian randomization (MR) study to ascertain the putative causal roles of protein levels of BGAT in pregnancy related outcomes. Cis-acting protein quantitative trait loci (pQTLs) robustly associated with protein level of BGAT (P

Abstract Background It is well known that high-fat diet (HFD)-induced metabolic syndrome plays a crucial role in cognitive decline and brain-blood barrier (BBB) breakdown. However, whether the bone-brain axis participates in this pathological process remains unknown. Here, we report that platelet-derived growth factor-BB (PDGF-BB) secretion by preosteoclasts in the bone accelerates neuroinflammation. The expression of alkaline phosphatase (ALPL), a nonspecific transcytosis marker, was upregulated during HFD challenge. Main body Preosteoclast-specific Pdgfb transgenic mice with high PDGF-BB concentrations in the circulation recapitulated the HFD-induced neuroinflammation and transcytosis shift. Preosteoclast-specific Pdgfb knockout mice were partially rescued from hippocampal neuroinflammation and transcytosis shifts in HFD-challenged mice. HFD-induced PDGF-BB elevation aggravated microglia-associated neuroinflammation and interleukin-1β (IL-1β) secretion, which increased ALPL expression and transcytosis shift through enhancing protein 1 (SP1) translocation in endothelial cells. Conclusion Our findings confirm the role of bone-secreted PDGF-BB in neuroinflammation and the transcytosis shift in the hippocampal region during HFD challenge and identify a novel mechanism of microglia-endothelial crosstalk in HFD-induced metabolic syndrome.

Background: Eurotium cristatum (E. cristatum) is the probiotic fungus in Fu-brick tea, with which fermentation brings a unique flavor and taste and health-promoting effects. Tartary buckwheat leaves are rich in functional active substances such as flavonoids and phenolic compounds, yet are not effectively utilized. Methods: Tartary buckwheat leaves were processed into raw green tea first and subsequently fermented with E. cristatum to develop a novel fermented leaf tea. The tea quality was evaluated by the aspects of the sensory scores by E-tongue, the volatile compounds by HS-SPME-GC-MS, the non-volatile profile by biochemical and UPLC-MS/MS methods and the antioxidant activity by the colorimetric assay. Results: Fermented leaf tea displayed a golden yellow color, a unique “flower” aroma and a dark-tea taste, with an improved sensory acceptability. Fermentation raised the content of volatile heterocyclic and aromatic compounds, alkenes and other aromatic components, which produced a unique floral flavor. The proportion of sour, bitter and astringency accounting non-volatile compounds such as phenolic acids and amino acids decreased, while the proportion of umami and sweet accounting substances such as responsible amino acids increased. Fermented leaf tea displayed a relative stronger total antioxidant activity against ABTS. Conclusion: E. cristatum fermentation exerted positive effects on Tartary buckwheat leaf tea quality.

Abstract There is evidence of increased soil organic carbon (SOC) and inorganic carbon (SIC) under fertilization in dry croplands of arid and semi-arid areas. However, not much is known about the responses of SOC and SIC in coastal saline − alkaline paddy soils that undergo flooding − draining cycles. Here, we assess the impacts of various combinations of organic and phosphorus fertilization on SOC and SIC and other soil properties in a saline − alkaline paddy field of the Yellow River Delta. Our study showed that organic fertilization resulted in an increase of SOC by 11.9% over 0 − 20 cm and 13.3% over 20 − 100 cm (i.e., 140 − 250 g C m−2y−1 over 0 − 100 cm) whereas phosphorus fertilization only led to a significant increase of SOC in subsoils (or ~ 75 g C m−2y−1 over 0 − 100 cm). There were little differences in SIC over 0 − 20 cm among the treatments; but SIC showed a significant decrease over 20 − 100 cm under organic fertilization combined with lower rate of phosphorus fertilization. However, high rate of phosphorus fertilization combined with organic amendment led to an increase in SIC stock, but a decrease in SOC stock in the subsoil. There was a significant negative relationship between SIC and SOC stocks in this paddy soil. This study demonstrated that fertilization practices could have complex influences on SOC and SIC in saline − alkaline paddy fields due to the flooding − draining cycles that lead to changes in soil conditions.

Image-based virtual try-on provides customers with convenient online clothes selections by transferring garments onto a reference person. Despite the emergence of several solutions to generate photo-realistic images and adapt to complex poses, controlling clothing length remains a challenge. We argue that the clothing reconstruction did not consider clothing length information, which results in clothing length being uncontrollable in most virtual try-on methods. To overcome this limitation, a novel clothing-agnostic person representation is proposed, which eliminates clothing information and quantifies clothing length as a numerical value. A new segmentation generator is designed to predict try-on segmentation maps of any length conditioned on this representation. Moreover, we correct two inaccurate labels, which enables our model to utilize clothing length control to generate a wider range of garment interactions in images, such as the top tucked into or worn over the bottom, as well as the top and bottom worn separately without intersecting. Extensive experiments demonstrate that our method achieves the goal of continuous clothing length control and generates photo-realistic images with fine details that outperform most baseline methods in terms of quantitative and qualitative metrics.

Abstract Background Mammalian cells have three types of RNA polymerases (Pols), Pol I, II, and III. However, the extent to which these polymerases are cross-regulated and the underlying mechanisms remain unclear. Results We employ genome-wide profiling after acute depletion of Pol I, Pol II, or Pol III to assess cross-regulatory effects between these Pols. We find that these enzymes mainly affect the transcription of their own target genes, while certain genes are transcribed by the other polymerases. Importantly, the most active type of crosstalk is exemplified by the fact that Pol III depletion affects Pol II transcription. Pol II genes with transcription changes upon Pol III depletion are enriched in diverse cellular functions, and Pol III binding sites are found near their promoters. However, these Pol III binding sites do not correspond to transfer RNAs. Moreover, we demonstrate that Pol III regulates Pol II transcription and chromatin binding of the facilitates chromatin transcription (FACT) complex to alter local chromatin structures, which in turn affects the Pol II transcription rate. Conclusions Our results support a model suggesting that RNA polymerases show cross-regulatory effects: Pol III affects local chromatin structures and the FACT-Pol II axis to regulate the Pol II transcription rate at certain gene loci. This study provides a new perspective for understanding the dysregulation of Pol III in various tissues affected by developmental diseases.

RNA polymerase II (Pol II) transcription factories play a central role in gene expression and 3D chromatin organization. Here, the authors demonstrate that RUVBL2 directly regulates Pol II clustering at active gene promoters.

Eurotium cristatum which produces golden particles, is the dominant fungus playing a key role in the “flowering” process and in the quality of Fu-brick tea. It can produce a variety of active enzymes and active metabolites, which have multiple biological effects, such as improving the quality of tea, antibacterial, hypoglycemic, regulating intestinal flora, antioxidant and other effects. As an important resource microorganism, Eurotium cristatum has been widely used. In this paper, the basic biological characteristics, rich enzyme system, diverse active metabolites, safety of Eurotium cristatum, as well as the changes of substances and biological activities in the processing of tea, beans, cereals, and Chinese herbs by Eurotium cristatum fermentation are reviewed. The existing problems and future research directions are analyzed and prospected, in order to provide reference for its in-depth research and development.

An innovative, ternary nanocomposite composed of overoxidized poly(3,4-ethylenedioxythiophene) (OPEDOT), gold nanoparticles (AuNPs), and electrochemically reduced graphene oxide (ERGO) was prepared on a glassy carbon electrode (GCE) (OPEDOT–AuNPs–ERGO/GCE) through homogeneous chemical reactions and heterogeneous electrochemical methods. The morphology, composition, and structure of this nanocomposite were characterized by transmission electron microscopy, scanning electron microscopy, X-ray diffraction, and X-ray photoelectron spectroscopy. The electrochemical properties of the OPEDOT–AuNPs–ERGO/GCE were investigated by cyclic voltammetry using potassium ferricyanide and hexaammineruthenium(III) chloride redox probe systems. This modified electrode shows excellent electro-catalytic activity for dopamine (DA) and uric acid (UA) under physiological pH conditions, but inhibits the oxidation of ascorbic acid (AA). Linear voltammetric responses were obtained when DA concentrations of approximately 4.0–100 μM and UA concentrations of approximately 20–100 μM were used. The detection limits (S/N=3) for DA and UA were 1.0 and 5.0 μM, respectively, under physiological conditions and in the presence of 1.0 mM of AA. This developed method was applied to the simultaneous detection of DA and UA in human urine, where satisfactory recoveries from 96.7% to 105.0% were observed. This work demonstrates that the developed OPEDOT–AuNPs–ERGO ternary nanocomposite, with its excellent ion-selectivity and electro-catalytic activity, is a promising candidate for the simultaneous detection of DA and UA in the presence of AA in physiological and pathological studies.

Medical image segmentation is an essential component of computer-aided diagnosis (CAD) systems. Thyroid nodule segmentation using ultrasound images is a necessary step for the early diagnosis of thyroid diseases. An encoder-decoder based deep convolutional neural network (DCNN), like U-Net architecture and its variants, has been extensively used to deal with medical image segmentation tasks. In this article, we propose a novel N-shape dense fully convolutional neural network for medical image segmentation, referred to as N-Net. The proposed framework is composed of three major components: a multi-scale input layer, an attention guidance module, and an innovative stackable dilated convolution (SDC) block. First, we apply the multi-scale input layer to construct an image pyramid, which achieves multi-level receiver field sizes and obtains rich feature representation. After that, the U-shape convolutional network is employed as the backbone structure. Moreover, we use the attention guidance module to filter the features before several skip connections, which can transfer structural information from previous feature maps to the following layers. This module can also remove noise and reduce the negative impact of the background. Finally, we propose a stackable dilated convolution (SDC) block, which is able to capture deep semantic features that may be lost in bilinear upsampling. We have evaluated the proposed N-Net framework on a thyroid nodule ultrasound image dataset (called the TNUI-2021 dataset) and the DDTI publicly available dataset. The experimental results show that our N-Net model outperforms several state-of-the-art methods in the thyroid nodule segmentation tasks.

Abstract Dynamic semiconductor diode generators (DDGs) offer a potential portable and miniaturized energy source, with the advantages of high current density, low internal impedance, and independence of the rectification circuit. However, the output voltage of DDGs is generally as low as 0.1–1 V, owing to energy loss during carrier transport and inefficient carrier collection, which requires further optimization and a deeper understanding of semiconductor physical properties. Therefore, this study proposes a vertical graphene/silicon DDG to regulate the performance by realizing hot carrier transport and collection. With instant contact and separation of the graphene and silicon, hot carriers are generated by the rebounding process of built‐in electric fields in dynamic graphene/silicon diodes, which can be collected within the ultralong hot electron lifetime of graphene. In particular, monolayer graphene/silicon DDG outputs a high voltage of 6.1 V as result of ultrafast carrier transport between the monolayer graphene and silicon. Furthermore, a high current of 235.6 nA is generated due to the carrier multiplication in graphene. A voltage of 17.5 V is achieved under series connection, indicating the potential to supply electronic systems through integration design. The graphene/silicon DDG has applications as an in situ energy source for harvesting mechanical energy from the environment.

Automated thyroid nodule classification in ultrasound images is an important way to detect thyroid nodules and to make a more accurate diagnosis. In this paper, we propose a novel deep convolutional neural network (CNN) model, called n-ClsNet, for thyroid nodule classification. Our model consists of a multi-scale classification layer, multiple skip blocks, and a hybrid atrous convolution (HAC) block. The multi-scale classification layer first obtains multi-scale feature maps in order to make full use of image features. After that, each skip-block propagates information at different scales to learn multi-scale features for image classification. Finally, the HAC block is used to replace the downpooling layer so that the spatial information can be fully learned. We have evaluated our n-ClsNet model on the TNUI-2021 dataset. The proposed n-ClsNet achieves an average accuracy (ACC) score of 93.8% in the thyroid nodule classification task, which outperforms several representative state-of-the-art classification methods.

Abstract Background The relationship between transcription and the 3D chromatin structure is debated. Multiple studies have shown that transcription affects global Cohesin binding and 3D genome structures. However, several other studies have indicated that inhibited transcription does not alter chromatin conformations. Results We provide the most comprehensive evidence to date to demonstrate that transcription plays a relatively modest role in organizing the local, small-scale chromatin structures in mammalian cells. We show degraded Pol I, Pol II, and Pol III proteins in mESCs cause few or no changes in large-scale 3D chromatin structures, selected RNA polymerases with a high abundance of binding sites or active promoter-associated interactions appear to be relatively more affected after the degradation, transcription inhibition alters local, small loop domains, as indicated by high-resolution chromatin interaction maps, and loops with bound Pol II but without Cohesin or CTCF are identified and found to be largely unchanged after transcription inhibition. Interestingly, Pol II depletion for a longer time significantly affects the chromatin accessibility and Cohesin occupancy, suggesting that RNA polymerases are capable of affecting the 3D genome indirectly. These direct and indirect effects explain the previous inconsistent findings on the influence of transcription inhibition on the 3D genome. Conclusions We conclude that Pol I, Pol II, and Pol III loss alters local, small-scale chromatin interactions in mammalian cells, suggesting that the 3D chromatin structures are pre-established and relatively stable.

In this paper, ridgetail white prawn (Exopalaemon carinicauda) quality evaluation was performed by electronic nose (e-nose). Physical/chemical, such as human sensory evaluation (HSE), weight loss, colour, total viable counts (TVC), GC-MS, K value, microbial, and e-nose were persistently tested. Principal component analysis (PCA) and stochastic resonance (SR) were used for measurement data processing. Results suggested that prawn quality persistently decreased due to microbial propagation. GC-MS results demonstrated that the volatile gases emitted by the samples increased during measurement. PCA could not discriminate all prawn samples, and SR eigen values discriminated all samples. Sensitivity evaluation on colour, TVC, weight loss, HSE, GC/MS, K value, and e-nose was made, and results indicated that e-nose presents some advantages including low cost, rapid examination, and good repeatability. E-nose Prawn quality evaluation model was also built for e-nose.

Paralytic shellfish poisoning (PSP) toxin is widely contained in seafood and its product. It brings great harm to human health when people eat it. During the past two decades, shellfish toxin quantitative analysis methods develop fast, such as mouse bioassay (MBA), chemical analysis method, immunoassay and cell-based assay (CBA). However, there are some disadvantages in these analytical methods such as time consuming, high cost. Therefore, a more suitable method is in demand. In this study, a novel method using high-frequency surface acoustic wave resonator (SAWR)-based sensor combined with living cells was developed for shellfish toxin continuous monitoring. The mouse tongue isolated taste bud (MTITB) cells cell lines were used as the sensing elements to establish the sensor device for PSP toxin carbamoyl toxin (CT) quantitative monitoring. The sensor device is in serial with SAWR. SAWR output frequency was recorded for detecting characterization. HEK293 cell lines were cultured on electrode and utilized as negative control. The results showed that MTITB cell-based sensor had selective responses to CT. This method is promising in PSP toxins rapid quantitative determination.

There is a rising prospective in harvesting energy from the environment, as in situ energy is required for the distributed sensors in the interconnected information society, among which the water flow energy is the most potential candidate as a clean and abundant mechanical source. However, for microscale and unordered movement of water, achieving a sustainable direct-current generating device with high output to drive the load element is still challenging, which requires for further exploration. Herein, we propose a dynamic PN water junction generator with moving water sandwiched between two semiconductors, which outputs a sustainable direct-current voltage of 0.3 V and a current of 0.64 μA. The mechanism can be attributed to the dynamic polarization process of water as moving dielectric medium in the dynamic PN water junction, under the Fermi level difference of two semiconductors. We further demonstrate an encapsulated portable power-generating device with simple structure and continuous direct-current voltage output of 0.11 V, which exhibits its promising potential application in the field of wearable devices and the IoTs.

Recharging the batteries by wireless energy facilitates the long-term running of the batteries, which will save numerous works of battery maintenance and replacement. Thus, harvesting energy form radio frequency (RF) waves has become the most promising solution for providing the micropower needed for wireless sensor applications, especially in a widely distributed 4G/5G wireless network. However, the current research on rectenna is mainly focused on the integrated antenna coupled with metal-insulator-metal tunneling diodes. Herein, by adopting the plasmon excitation of graphene and quantum tunneling process between graphene and GaAs or GaN, we demonstrated the feasibility of harvesting energy from the 915 MHz wireless source belonging to 5G in the FR1 range (450 MHz–6 GHz) which is also known as sub-6G. The generated current and voltage can be observed continuously, with the direction defined by the built-in field between graphene and GaAs and the incident electromagnetic waves treated as the quantum energy source. Under the RF illumination, the generated current increases rapidly and the value can reach in the order of 10-8–10-7 A. The harvester can work under the multiple channel mode, harvesting energy simultaneously from different flows of wireless energy in the air. This research will open a new avenue for wireless harvesting by using the ultrafast process of quantum tunneling and unique physical properties of graphene.

Searching for light and miniaturized functional device structures for sustainable energy gathering from the environment is the focus of energy society with the development of the internet of things. The proposal of a dynamic heterojunction-based direct current generator builds up new platforms for developing in situ energy. However, the requirement of different semiconductors in dynamic heterojunction is too complex to wide applications, generating energy loss for crystal structure mismatch. Herein, dynamic homojunction generators are explored, with the same semiconductor and majority carrier type. Systematic experiments reveal that the majority of carrier directional separation originates from the breaking symmetry between carrier distribution, leading to the rebounding effect of carriers by the interfacial electric field. Strikingly, NN Si homojunction with different Fermi levels can also output the electricity with higher current density than PP/PN homojunction, attributing to higher carrier mobility. The current density is as high as 214.0 A/m2, and internal impedance is as low as 3.6 kΩ, matching well with the impedance of electron components. Furthermore, the N-i-N structure is explored, whose output voltage can be further improved to 1.3 V in the case of the N-Si/Al2O3/N-Si structure, attributing to the enhanced interfacial barrier. This approach provides a simple and feasible way of converting low-frequency disordered mechanical motion into electricity.

Abstract The overloaded energy cost has become the main concern of the now fast developing society, which make novel energy devices with high power density of critical importance to the sustainable development of human society. Herein, a dynamic Schottky diode based generator with ultrahigh power density of 1262.0 W m−2 for sliding Fe tip on rough p‐type silicon is reported. Intriguingly, the increased surface states after rough treatment lead to an extremely enhanced current density up to 2.7 × 105 A m−2, as the charged surface states can effectively accelerate the carriers through large atomic electric field, while the reflecting directions are regulated by the built‐in electric field of the Schottky barrier. This research provides an open avenue for utilizing the surface states in semiconductors in a subversive way, which can co‐utilize the atomic electric field and built‐in electric field to harvest energy from the mechanical movements, especially for achieving an ultrahigh current density power source.

To explore the relationship between the attributes of the rice panicle and its weight parameters, 6 different rice cultivars from Sihong City, Jiangsu Province, China were selected for sampling in 2017. Then, their weight parameters were measured. The images of rice panicles were scanned to obtain grain area. The significant correlation between the grain area and the panicle weight was found on the base of the analysis for the data obtained [1]. Now the weight and area data were present here for exploring the rapid yield estimation models and crop phenotype research. Keywords: Six rice cultivars, Weight parameters, Panicle images, Grain area

Static heterojunction-based electronic devices have been widely applied because carrier dynamic processes between semiconductors can be designed through band gap engineering. Herein, we demonstrate a tunable direct-current generator based on the dynamic heterojunction, whose mechanism is based on breaking the symmetry of drift and diffusion currents and rebounding hot carrier transport in dynamic heterojunctions. Furthermore, the output voltage can be delicately adjusted and enhanced with the interface energy level engineering of inserting dielectric layers. Under the ultrahigh interface electric field, hot electrons will still transfer across the interface through the tunneling and hopping effect. In particular, the intrinsic anisotropy of black phosphorus arising from the lattice structure produces extraordinary electronic, transport, and mechanical properties exploited in our dynamic heterojunction generator. Herein, the voltage of 6.1 V, current density of 124.0 A/m2, power density of 201.0 W/m2, and energy-conversion efficiency of 31.4% have been achieved based on the dynamic black phosphorus/AlN/Si heterojunction, which can be used to directly and synchronously light up light-emitting diodes. This direct-current generator has the potential to convert ubiquitous mechanical energy into electric energy and is a promising candidate for novel portable and miniaturized power sources in the in situ energy acquisition field.

Energy pile heat storage technology is a typical soil source heat pump system, and features and parameters of soil have great influence on the heat storage of energy pile. Ground water permeation will take heat in soil away directly and if the permeation speed is too fast, the heat storage system of the energy pile even cannot store heat. In order to guarantee that the heat storage system of the energy pile can function well in practical working conditions, it is necessary to do further quantitative study of the ground water permeation’s influence on soil source heat pump. This study focuses on soil permeation’s influence on energy pile heat exchange through establishing the energy pile heat storage model and finds that when the permeation speed is less than 3×10-7m/s, it is the desirable heat storage condition; when the permeation speed is more than 1×10-6m/s, the energy pile heat storage system cannot store heat at all.

While the visible plume from a cooling tower is not a pollutant, it can affect the surrounding environment. Moreover, the accompanied evaporation loss has a great potential for wastewater recovery. In the present study, a novel coupling technology for water conservation and plume abatement was proposed, and its feasibility was verified by using thermodynamic analysis. A surface-type heat exchanger was designed and a thermodynamic calculation model was established. Next, based on the principle of “no plume,” the effect of the number of heat exchanger units (N) and the circulating water volume (G) on the water conservation and plume abatement was evaluated under design condition. Results showed that the optimized parameters for the operation of the cooling towers were N = 8 and G < 3000 m3/h, which have a good effect on water conservation and plume abatement. Furthermore, as per the condensation calculation model, the average water conservation amount was 1.105 kg/s and the annual water conservation amount reached 2.8641 × 107 kg.