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Abstract The impact of biochar application on plant performance under drought stress necessitates a comprehensive understanding of biochar–soil interaction, root growth, and plant physiological processes. Therefore, pot experiments were conducted to assess the effects of biochar on plant responses to drought stress at the seedling stage. Two contrasting maize genotypes (drought-sensitive KN5585 vs. -tolerant Mo17) were subjected to biochar application under drought stress conditions. The results indicated that biochar application decreased soil exchangeable Na+ and Ca2+ contents while increased soil exchangeable K+ content (2.7-fold) and electrical conductivity (4.0-fold), resulting in an elevated leaf sap K+ concentration in both maize genotypes. The elevated K+ concentration with biochar application increased root apoplastic pH in the drought-sensitive KN5585, but not in the drought-tolerant Mo17, which stimulated the activation of H+-ATPase and H+ efflux in KN5585 roots. Apoplast alkalinization of the drought-sensitive KN5585 resulting from biochar application further inhibited root growth by 30.7%, contributing to an improvement in water potential, a reduction in levels of O2 –, H2O2, T-AOC, SOD, and POD, as well as the down-regulation of genes associated with drought resistance in KN5585 roots. In contrast, biochar application increased leaf sap osmolality and provided osmotic protection for the drought-tolerant Mo17, which was associated with trehalose accumulation in Mo17 roots. Biochar application improved sucrose utilization and circadian rhythm of Mo17 roots, and increased fresh weight under drought stress. This study suggests that biochar application has the potential to enhance plant drought tolerance, which is achieved through the inhibition of root growth in sensitive plants and the enhancement of osmotic protection in tolerant plants, respectively. Graphical Abstract

Flooding intensity significantly alters the availability of iron (Fe), zinc (Zn), and cadmium (Cd) in paddy soil. However, the influence of arbuscular mycorrhizal fungi (AMF) on the uptake and transfer of Cd and micronutrients (Fe and Zn) under Cd stress in varying flooding conditions is not well understood. A pot experiment was conducted to investigate the micronutrient homeostasis and Cd uptake and transfer in rice cultivated in Cd-contaminated soil with AMF inoculation under continuous and intermittent flooding conditions. Compared to non-inoculation controls, mycorrhizal inoculation decreased Cd concentration in rice plants under continuous and intermittent flooding, and improved grain yield by 39.2 % for early season rice and 21.1 % for late season rice under continuous flooding. Mycorrhizal inoculation balanced the availability of Zn and Fe and decreased the availability of Cd in soil, lowering the ratios of soil-available Cd to both soil-available Zn and soil Fe2+. These changes led to a redistribution of Zn and Fe concentrations in rice, thereby reducing Cd acquisition in a soil-rice system. Structural equation model (SEM) analysis revealed that mycorrhizal inoculation had a strong direct negative effect on the expression of Zn and Fe-related genes OsNRAMP1, OsIRT1, and OsIRT2 in the roots of rice, which in turn directly affected root Cd concentration. Furthermore, mycorrhizal colonization decreased Cd transfer coefficients from leaves to grains under continuous flooding and from nodes and leaves to grains under intermittent flooding. In the nodes, the Fe concentration and the expression of genes OsIRT1 and OsHMA2 were associated with Cd transfer from the nodes to grains. Similarly, in the leaves, the expression of genes OsZIP1 and OsMTP1 corresponded with Cd transfer from leaves to grains. This study provides insights into the role of AMF in affecting micronutrient concentrations and Cd uptake in rice under varying flooding conditions.

The soybean seed yield response to phosphorus (P) fertilizer has significantly increased during soybean breeding but the underlying mechanisms remain elusive. In this study, we used two soybean cultivars with high (Andou 8 (AD8)) and low (Qiandou 5 (QD5)) seed yield response to P fertilizer to compare their yield and yield components, biomass accumulation and partitioning, P content and partitioning and P-use efficiency in Shiqian (SQ) and Dafang (DF) during the growing season in 2020 under 0 (P0) and 35 (P35) kg P ha−1 supply. The results show that AD 8 had a greater seed yield, pod biomass, filled-pod number, seed number, pod P content and P partitioning to pods, and P-use efficiency based on seed yield (PUESY) but lower P-use efficiency based on biomass (PUEB) than QD5 at two experimental sites. The seed number was positively correlated with total biomass and P content, especially with greater pod biomass accumulation and its partition to pods which showed a positive correlation with seed number. Seed number was negatively correlated with stem dry weight and its partitioning to stem, and stem P partition. We conclude (1) different yield response to P fertilizer are explained by different biomass and P content and their partitioning to pod; (2) high biomass and P-conversion efficiency increased the seed number, which accounted for a high yield response to P fertilizer. Our results highlight that soybean breeding increased biomass and nutrient content and their conversion efficiency to achieve high seed yield with P-fertilizer supply.

The phyllosphere, particularly the leaf surface of plants, harbors a diverse range of microbiomes that play a vital role in the functioning of terrestrial ecosystems. However, our understanding of microbial successions and their impact on functional genes during plant community development is limited. In this study, considering core and satellite microbial taxa, we characterized the phyllosphere microbiome and functional genes in various microhabitats (i.e., leaf litter, moss and plant leaves) across the succession of a plant community in a low-altitude glacier foreland. Our findings indicate that phyllosphere microbiomes and associated ecosystem stability increase during the succession of the plant community. The abundance of core taxa increased with plant community succession and was primarily governed by deterministic processes. In contrast, satellite taxa abundance decreased during plant community succession and was mainly governed by stochastic processes. The abundance of microbial functional genes (such as C, N, and P hydrolysis and fixation) in plant leaves generally increased during the plant community succession. However, in leaf litter and moss leaves, only a subset of functional genes (e.g., C fixation and degradation, and P mineralization) showed a tendency to increase with plant community succession. Ultimately, the community of both core and satellite taxa collaboratively influenced the characteristics of phyllosphere nutrient-cycling genes, leading to the diverse profiles and fluctuating abundance of various functional genes during plant community succession. These findings offer valuable insights into the phyllosphere microbiome and plant–microbe interactions during plant community development, advancing our understanding of the succession and functional significance of the phyllosphere microbial community.

The colorful “delayed leaf greening” is a common but overlooked phenomenon in phosphorus (P)-limited environments in habitats in tropical, subtropical and temperate forests, but the physiological mechanism underpinning it remains unclear. It is important to understand how allocation of phosphorus to major leaf P fractions shifts during leaf development, as a strategy for utilizing P efficiently. We measured concentrations of leaf nitrogen and P and five chemical P fractions, and eight leaf chemical element concentrations (K, Ca, Mg, Mn, Fe, Cu, Zn and Se) in young and mature leaves of six woody plants exhibiting delayed greening in China. We also measured leaf mass per area, photosynthetic rate, photosynthetic phosphorus-use efficiency, and soil nutrient concentrations. The results indicate six species exhibiting delayed greening had different leaf P concentrations during leaf development, but the same nitrogen concentrations. We further show major leaf chemical P fractions like metabolite P, nucleic acid P and lipid P showed differences in young and mature leaves. The concentration of lipid P, nucleic acid P, Pi and residual P significantly decreased from young to mature leaves, while that of metabolite P was constant. There was a greater allocation of P to phospholipids and metabolite P in mature leaves. The concentration of Cu and K were significantly higher in young leaves. This study provides new insight to investigate the roles of different P fractions in young and mature leaves, and how the allocation shifts for plants to utilize phosphorus.

Fertilization or atmospheric deposition of nitrogen (N) and phosphorus (P) to terrestrial ecosystems can alter soil N (P) availability and the nature of nutrient limitation for plant growth. Changing the allocation of leaf P fractions is potentially an adaptive strategy for plants to cope with soil N (P) availability and nutrient-limiting conditions. However, the impact of the interactions between imbalanced anthropogenic N and P inputs on the concentrations and allocation proportions of leaf P fractions in forest woody plants remains elusive. We conducted a meta-analysis of data about the concentrations and allocation proportions of leaf P fractions, specifically associated with individual and combined additions of N and P in evergreen forests, the dominant vegetation type in southern China where the primary productivity is usually considered limited by P. This assessment allowed us to quantitatively evaluate the effects of N and P additions alone and interactively on leaf P allocation and use strategies. Nitrogen addition (exacerbating P limitation) reduced the concentrations of leaf total P and different leaf P fractions. Nitrogen addition reduced the allocation to leaf metabolic P but increased the allocation to other fractions, while P addition showed opposite trends. The simultaneous additions of N and P showed an antagonistic (mutual suppression) effect on the concentrations of leaf P fractions, but an additive (summary) effect on the allocation proportions of leaf P fractions. These results highlight the importance of strategies of leaf P fraction allocation in forest plants under changes in environmental nutrient availability. Importantly, our study identified critical interactions associated with combined N and P inputs that affect leaf P fractions, thus aiding in predicting plant acclimation strategies in the context of intensifying and imbalanced anthropogenic nutrient inputs.

Crop rotations including legumes have been proposed as a strategy to enhance food production. Here, the authors conduct a global meta-analysis on legume-based crop rotations, showing that legume pre-crops increase 20% of yield in average across various crops and climatic regions.

● For 8000 years, agricultural practices have affected atmospheric CO2 concentrations. ● Paddy rice cultivation has impacted atmospheric CH4 concentration since 5000 years ago. ● Modern agricultural practices must include carbon storage and reduced emissions. ● Sustainable management in agriculture must be combined with decarbonizing the economy and reducing population growth. Since humans started practicing agriculture at the expense of natural forests, 8000 years ago, they have affected atmospheric CO2 concentrations. Their impact on atmospheric CH4 started about 5000 years ago, as result of the cultivation of paddy rice. A challenge of modern agricultural practices is to reverse the impact cropping has had on greenhouse gas emissions and the global climate. There is an increasing demand for agriculture to provide food security as well as a range of other ecosystem services. Depending on ecosystem management, different practices may involve trade-offs and synergies, and these must be considered to work toward desirable management systems. Solution toward food security should not only focus on agricultural management practices, but also on strategies to reduce food waste, more socially-just distribution of resources, changes in lifestyle including decarbonization of the economy, as well as reducing human population growth.

The stability of soil organic carbon (SOC) plays a vital role in C sequestration, and largely depends on the availability of soil nitrogen (N) and phosphorus (P). Understanding how different fractions of SOC respond to N and P availability and the underlying microbial mechanism is crucial for mitigating climate changes. Here, we assessed how soil N and P availability modifies different SOC fractions and the soil microbial communities in a tropical forest. We measured soil chemical properties, SOC fractions, microbial PLFA abundance, fungal rDNA and its predicted gene abundance, and extracellular enzyme activities within a field N and P addition experiment. P addition decreased the concentration of recalcitrant SOC and greatly increased the soil oxidative extracellular enzyme activities, while N addition increased active SOC, mainly light fractions, and decreased soil phenol oxidase activity. P addition also induced the greatest abundance of oxidoreductases. Additionally, the transferases, lyases, hydrolases, isomerases, and ligases were also expressed at higher levels after P addition. The results indicate that enhanced soil microbial activities after P addition accelerated recalcitrant SOC decomposition by higher oxidative enzyme activities. Given the increasing N deposition, tropical forests that characterized by a low P have a great potential to sequester more SOC which will mitigate climate change. However, the increase in SOC might be vulnerable to disturbance, because most of the increased C is the active SOC.

Measurement(s) plant trait Technology Type(s) digital curation Sample Characteristic - Organism Viridiplantae Sample Characteristic - Location Australia Machine-accessible metadata file describing the reported data: https://doi.org/10.6084/m9.figshare.14545755

Abstract Estimation of leaf nutrient composition of dominant plant species from contrasting habitats (i.e., karst and nonkarst forests) provides an opportunity to understand how plants are adapted to karst habitats from the perspective of leaf traits. Here, we measured leaf traits—specific leaf area (SLA), concentrations of total carbon ([TC]), nitrogen ([TN]), phosphorus ([TP]), calcium ([Ca]), magnesium ([Mg]), manganese ([Mn]), minerals ([Min]), soluble sugars, soluble phenolics, lipids, and organic acids ([OA])—and calculated water‐use efficiency (WUE), construction costs (CC), and N/P ratios, and searched for correlations between these traits of 18 abundant plant species in karst and nonkarst forests in southwestern China. Variation in leaf traits within and across the abundant species was both divergent and convergent. Leaf [TC], [Ca], [Min], [OA], and CC were habitat‐dependent, while the others were not habitat‐ but species‐specific. The correlations among [TN], [TP], SLA, [TC], CC, [Min], WUE, [OA], and CC were habitat‐independent, and inherently associated with plant growth and carbon allocation; those between [CC] and [Lip], between [Ca] and [Mg], and between [Mg] and [WUE] were habitat‐dependent. Habitat significantly affected leaf [Ca] and thus indirectly affected leaf [OA], [Min], and CC. Our results indicate that plants may regulate leaf [Ca] to moderate levels via adjusting leaf [OA] under both high and low soil Ca availability, and offer new insights into the abundance of common plant species in contrasting habitats.

Abstract Aim To examine calcicole and calcifuge plant strategies, as well as nutrient‐acquisition strategies, as drivers of the distribution of species in response to edaphic factors, and the degree to which these strategies may act as filters to species establishment in ecological restoration on heavily altered or reconstructed substrates. Location An 82,000‐ha area within a major mining province in the Mid‐West region of Western Australia, harboring vegetation communities ranging from species‐poor halophytic scrub on saline flats to dense biodiverse shrubland on the skeletal soils of ancient Banded Ironstone Formations (BIF). Methods Univariate and multivariate analyses were employed to examine how variation in soil chemistry and landscape position (undulating plains, slopes, and BIF crests and ridges) influenced patterns of floristic diversity, calcifuge plant strategies, and nutrient‐acquisition strategies in 538 plant species from 830 relevés. Results Landscape position was the strongest driver of species richness and vegetation functional composition. Soils became increasingly acidic and P‐impoverished along an increasing elevational gradient. Vegetation from different landscape positions was not compositionally dissimilar, but vegetation of BIF crests and ridges was up to twice as biodiverse as vegetation from adjacent lower‐relief areas and harbored higher proportions of calcifuge species and species with mycorrhizal associations. Main conclusions Topographic and edaphic complexity of BIF landforms in an otherwise relatively homogenous landscape has likely facilitated species accumulation over long time periods. They represent musea of regional floristic biodiversity, excluding only species that cannot establish or are inferior competitors in heavily weathered, acidic, skeletal, and nutrient‐impoverished soils. Plant strategies likely represent a major filter in establishing biodiverse, representative vegetation on postmining landforms in geologically ancient regions.

Soil age is thought to be an important driver of ecosystem development. Here, the authors perform a global survey of soil chronosequences and meta-analysis to show that, contrary to expectations, soil age is a relatively minor ecosystem driver at the biome scale once other drivers such as parent material, climate, and vegetation type are accounted for.

The global ecological predictors of soil priming remain unclear. Here the authors conducted a global survey of soils from 86 global locations using an isotopic approach and find that in more mesic sites with high SOC concentrations, soil priming effects are more likely to be negative.

Chickpea—the second most important grain legume worldwide—is cultivated mainly on marginal soils. Phosphorus (P) deficiency often restricts chickpea yields. Understanding the genetics of traits encoding P-acquisition efficiency and P-use efficiency will help develop strategies to reduce P-fertilizer application. A genome-wide association mapping approach was used to determine loci and genes associated with root architecture, root traits associated with P-acquisition efficiency and P-use efficiency, and any associated proxy traits. Using three statistical models—a generalized linear model (GLM), a mixed linear model (MLM), and a fixed and random model circulating probability unification (FarmCPU) —10, 51, and 40 marker-trait associations (MTAs), respectively were identified. A single nucleotide polymorphism (SNP) locus (Ca1_12310101) on Ca1 associated with three traits, i.e., physiological P-use efficiency, shoot dry weight, and shoot P content was identified. Genes related to shoot P concentration (NAD kinase 2, dynamin-related protein 1C), physiological P-use efficiency (fasciclin-like arabinogalactan protein), specific root length (4-coumarate–CoA ligase 1) and manganese concentration in mature leaves (ABC1 family protein) were identified. The MTAs and novel genes identified in this study can be used to improve P-use efficiency in chickpea.

Phosphorus (P) deficiency induces cluster-root formation and carboxylate exudation in most Proteaceae. However, how external P supply regulates these root traits in Macadamia integrifolia remains unclear. Macadamia plants were grown hydroponically with seven P levels to characterize biomass allocation, cluster-root development, and exudation of carboxylates and acid phosphatases. Plant biomass increased with increasing P supply, peaking at 5 μM P, was the same at 5–25 μM P, and declined at 50–100 μM P. Leaf P concentration increased with increasing P supply, but shoot biomass was positively correlated with leaf P concentration up to 0.7–0.8 mg P g–1 dry weight (DW), and declined with further increasing leaf P concentration. The number of cluster roots declined with increasing P supply, with a critical value of leaf P concentration at 0.7–0.8 mg P g–1 DW. We found a similar trend for carboxylate release, with a critical value of leaf P concentration at 0.5 mg g–1 DW, but the activity of acid phosphatases showed a gradually-decreasing trend with increasing P supply. Our results suggest that leaf P concentration regulates the development and functioning of cluster roots, with a critical P concentration of 0.5–0.8 mg g–1, above which macadamia growth is inhibited.

Phytate-phosphorus (P) in food and feed is not efficiently utilized by humans and non-ruminant livestock, potentially contributing to high losses of P to the environment. Crops with high P-acquisition efficiency can access soil P effectively. It remains elusive whether crop genotypes with high P-acquisition efficiency can also have low seed phytate concentrations. A core collection of 256 soybean [Glycine max (L.) Merr.] genotypes from China with diverse genetic background were grown in the same environment and seeds were sampled to screen for seed phytate-P concentration. Some of these genotypes were also grown in a low-P soil in the glasshouse to measure root morphological and physiological traits related to P acquisition. Large genotypic variation was found in seed phytate-P concentration (0.69–5.49 mg P g–1 dry weight), total root length, root surface area, rhizosheath carboxylates, and acid phosphatase activity in rhizosheath soil. Geographically, seed phytate-P concentration was the highest for the genotypes from Hainan Province, whereas it was the lowest for the genotypes from Inner Mongolia. Seed phytate-P concentration showed no correlation with any desirable root traits associated with enhanced P acquisition. Two genotypes (Siliyuan and Diliuhuangdou-2) with both low phytate concentrations and highly desirable P-acquisition traits were identified. This is the first study to show that some soybean genotypes have extremely low seed phytate concentrations, combined with important root traits for efficient P acquisition, offering material for breeding genotypes with low seed phytate-P concentrations.

Arachis hypogaea (peanut) is a globally important oilseed crop with high nutritional value. However, upon exposure to overnight chilling stress, it shows poor growth and seedling necrosis in many cultivation areas worldwide. Calcium (Ca2+) enhances chilling resistance in various plant species. We undertook a pot experiment to investigate the effects of exogenous Ca2+ and a calmodulin (CaM) inhibitor on growth and photosynthetic characteristics of peanut exposed to low night temperature (LNT) stress following warm sunny days. The LNT stress reduced growth, leaf extension, biomass accumulation, gas exchange rates, and photosynthetic electron transport rates. Following LNT stress, we observed larger starch grains and a concomitant increase in nonstructural carbohydrates and hydrogen peroxide (H2O2) concentrations. The LNT stress further induced photoinhibition and caused structural damage to the chloroplast grana. Exogenous Ca2+ enhanced plant growth following LNT stress, possibly by allowing continued export of carbohydrates from leaves. Foliar Ca2+ likely alleviated the nocturnal chilling-dependent feedback limitation on photosynthesis in the daytime by increasing sink demand. The foliar Ca2+ pretreatment protected the photosystems from photoinhibition by facilitating cyclic electron flow (CEF) and decreasing the proton gradient (ΔpH) across thylakoid membranes during LNT stress. Foliar application of a CaM inhibitor increased the negative impact of LNT stress on photosynthetic processes, confirming that Ca2+–CaM played an important role in alleviating photosynthetic inhibition due to the overnight chilling-dependent feedback.

Peanut (Arachis hypogaea L.) is a globally important oil crop, which often experiences poor growth and seedling necrosis under low nocturnal temperatures (LNT). This study assessed the effects of supplementary calcium (Ca2+) and a calmodulin inhibitor on peanut growth and photosynthetic characteristics of plants exposed to LNT, followed by recovery at a higher temperature. We monitored key growth and photosynthetic parameters in a climate-controlled chamber in pots containing soil. LNT reduced peanut growth and dry matter accumulation, enhanced leaf nonstructural carbohydrates concentrations and non-photochemical quenching, decreased the electron transport rate, increased the transmembrane proton gradient, and decreased gas exchange rates. In peanuts subjected to LNT, foliar application of Ca2+ restored growth, dry matter production and leaf photosynthetic capacity. In particular, the foliar Ca2+ application restored temperature-dependent photosynthesis feedback inhibition due to improved growth/sink demand. Foliar sprays of a calmodulin inhibitor further deteriorated the effects of LNT which validated the protective role of Ca2+ in facilitating LNT tolerance of peanuts.

A reduction in population size due to land clearing and habitat fragmentation may have negative effects on plant fitness. A relationship between population size and progeny performance for four small (n < 20 plants) and four large (n > 100 plants) populations of Banksia ilicifolia, a widespread but naturally fragmented species in south-western Australia, was assessed. Seeds collected from the field were germinated and a comparative growth study conducted in a greenhouse. After six months, the survival rate of seedlings from larger populations was double (36%) that of smaller populations, while germination rates and other measures of growth performance were independent of population size. The conservation and management implications of reduced fitness associated with small population size in B. ilicifolia are discussed.

Precipitation of calcium in plants is common. There are abundant studies on the uptake and content of magnesium, strontium and barium, which have similar chemical properties to calcium, in comparison with those of calcium in plants, but studies on co-precipitation of these elements with calcium in plants are rare. In this study, we compared morphologies, distributional patterns, and elemental compositions of crystals in tissues of four Acacia species grown in the field as well as in the glasshouse. A comparison was also made of field-grown plants and glasshouse-grown plants, and of phyllodes of different ages for each species. Crystals of various morphologies and distributional patterns were observed in the four Acacia species studied. Magnesium, strontium and barium were precipitated together with calcium, mainly in phyllodes of the four Acacia species, and sometimes in branchlets and primary roots. These elements were most likely precipitated in forms of oxalate and sulfate in various tissues, including epidermis, mesophyll, parenchyma, sclerenchyma (fibre cells), pith, pith ray and cortex. In most cases, precipitation of calcium, magnesium, strontium and barium was biologically induced, and elements precipitated differed between soil types, plant species, and tissues within an individual plant; the precipitation was also related to tissue age. Formation of crystals containing these elements might play a role in regulating and detoxifying these elements in plants, and protecting the plants against herbivory.