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E-mail: hwlee@inha.ac.krReceived March 24, 2014, Accepted March 31, 2014Key Words : Biphasic free energy correlation, Phosphoryl transfer reaction, Pyridinolysis, Aryl N,N-Dimethylphosphoroamidochloridate The kinetic studies on the reactions of Y-aryl N,N-di-methyl phosphoroamidochloridates (1) with X-anilines anddeuterated anilines in acetonitrile (MeCN) were reported bythis lab.

concave upwards with a break point at X = 3-Ph and Y = H, respectively. The sign of cross-interaction constants (CICs; ρXY) is positive with all X and Y. Proposed mechanism is a stepwise process with a rate-limiting leaving group departure from the intermediate with all X and Y. The kinetic results of 1 are compared with those of Yaryl phenyl chlorothiophosphates (2). In the case of Y = electron-withdrawing groups, the cross-interaction between Y and Y, due to additional substituent Y, is significant enough to change the sign of ρXY from negative with 2 to positive with 1, indicative of the change of mechanism from a rate-limiting bond formation to bond breaking.

The substituent effects on the pyridinolysis (XC5H4N) of Y-aryl ethyl chlorophosphates are investigated in acetonitrile at 35.0 C. The two strong π-acceptor substituents, X = 4-Ac and 4-CN in the X-pyridines, exhibit large positive deviations from the Hammett plots but little positive deviations from the Bronsted plots. The substituent Y effects on the rates are really significant and the Hammett plots for substituent Y variations in the substrates invariably change from biphasic concave downwards via isokinetic at X = H to biphasic concave upwards with a break point at Y = 3-Me as the pyridine becomes less basic. These are interpreted to indicate a mechanistic change at the break point from a stepwise mechanism with a rate-limiting bond formation (ρXY = –6.26) for Y = (4-MeO, 4-Me, 3-Me) to with a rate-limiting leaving group expulsion from the intermediate (ρXY = +5.47) for Y = (4-Me, H, 3-MeO). The exceptionally large magnitudes of ρXY values imply frontside nucleophilic attack transition state.

E-mail: hwlee@inha.ac.krReceived December 16, 2013, Accepted January 6, 2014The kinetic studies on the reactions of O,O-diethyl Z-S-aryl phosphorothioates with X-pyridines have beencarried out in dimethyl sulfoxide. The free energy correlations with X in the nucleophiles are biphasic concaveupwards with a break point at X = H, while those for substituent Z variations in the leaving groups are linear.The negative sign of ρ

E-mail: hwlee@inha.ac.krReceived November 22, 2013, Accepted December 5, 2013The kinetic studies on the reactions of O-methyl N,N-diisopropylamino phosphonochloridothioate with X-anilines and X-pyridines have been carried out in acetonitrile. The free energy relationship with X in theanilines exhibits biphasic concave upwards with a break region between X = (H and 4-F), giving unusualnegative β

The nucleophilic substitution reactions of Y-aryl N,N-dimethyl phosphoroamidochloridates with substituted anilines and deuterated anilines are kinetically investigated in acetonitrile at 65.0 C. A stepwise mechanism with a rate-limiting leaving group departure from the intermediate is proposed based on the positive ρXY value. The deuterium kinetic isotope effects involving deuterated anilines show secondary inverse with all the nucleophiles, rationalized by a dominant backside nucleophilic attack.

Summary of the Second-Order Rate Constants ( k 2 × 10 3 /M –1 s –1 ) at 35.0 o C, NBO Charges at the Reaction Center P Atom,Summations of the Steric Constants and Selectivity Parameters ( X and  XY ) for the Reactions of 1 - 11 with X-Pyridines in MeCNno R 1 OR 2 O k 2 × 10 3 a charge at P – E S  X e  XY 1 MeO MeO 1.54 c 1.687 0 1.09/0.20 – 2 MeO EtO 0.620 1.693 0.07 1.50/0.43 – 3 EtO EtO 1.19 c 1.701 0.14 1.02/0.29 – 4 EtO PrO 0.609 1.700 0.43 1.44/0.36 – 5 PrO PrO 1.16 1.702 0.72 1.08/0.31 – 6 BuO BuO 1.01 1.703 0.78 1.26/0.31 – 7 i -PrO i -PrO 0.460 1.723 0.94 0.99/0.15 – 8 MeO YC 6 H 4 O 0.835 b 1.686 2.48 0.89-0.98/0.29-0.32 –0.71/–0.36 e 9 EtO YC 6 H 4 O0.137 b,d 1.687 2.55 2.31-2.33/0.45-0.47 0/0/0/0 f 10 PrO YC 6 H 4 O 0.781 b 1.687 2.84 0.74-0.93/0.30-0.39 1.59/0.94 e 11 PhO YC 6 H 4 O 0.333 b 1.661 4.96 1.36-1.50/ 0.23-0.48 2.42/5.14/–1.02/–0.04 fa Value with X = H at 35.0 o C. b Value with Y = H. c Extrapolated value. d Empirical kinetic data. e Strongly/weakly basic pyridines.

Nucleophilic substitution reactions of ethyl methyl (2), ethyl propyl (4) and diisopropyl (7) chlorothiophosphates with substituted anilines and deuterated anilines are investigated kinetically in acetonitrile at . A concerted mechanism is proposed based on the selectivity parameters. The deuterium kinetic isotope effects (DKIEs; ) are secondary inverse () with 2, primary normal and secondary inverse () with 4, and primary normal () with 7. The primary normal and secondary inverse DKIEs are rationalized by frontside attack involving hydrogen bonded, four-center-type transition state, and backside attack involving in-line-type transition state, respectively. The anilinolyses of ten chlorothiophosphates are examined based on the reactivity, steric effect of the two ligands, thio effect, reaction mechanism, DKIE and activation parameter.

)are positive for both electron-donating and electron-withdrawing Y substituents. The kinetic results of 1 arecompared with those of Y-aryl phenyl chlorothiophosphates (2). The cross-interaction between Y and Y, dueto additional substituent Y, is significant enough to result in the change of the sign of ρ

) invariably increase from secondaryinverse to primary normal as the aniline becomes more basic, rationalized by the transition state variation froma backside to a frontside attack. For the pyridinolysis of 1, the authors propose a stepwise mechanism with arate-limiting step change from bond breaking for more basic pyridines to bond formation for less basicpyridines based on the selectivity parameters and activation parameters. Biphasic concave upward free energyrelationship with X is ascribed to a change in the attacking direction of the nucleophile from a frontside attackwith more basic pyridines to a backside attack with less basic pyridines.Key Words : Phosphoryl transfer reaction, Anilinolysis, Pyridinolysis, Bis(2-oxo-3-oxazolidinyl) phosphinicchloride, Deuterium kinetic isotope effectIntroductionContinuing the kinetic studies on the aminolyses of(Lig

concave upwards with a break point at X = H (2) and 3-Ph (4), respectively. A stepwise mechanism with a ratelimiting leaving group expulsion from the intermediate is proposed based on the magnitudes of selectivity parameters for both substrates. The considerably large values of βX = 1.50(2) and 1.44(4) with strongly basic pyridines and relatively small values of βX = 0.43(2) and 0.36(4) with weakly basic pyridines are interpreted as a change of the attacking direction of the X-pyridines from a frontside to a backside attack toward the chloride leaving group.

E-mail: hwlee@inha.ac.krReceived June 5, 2013, Accepted June 14, 2013Key Words : Thiophosphoryl transfer reaction, Biphasic free energy correlation, Pyridinolysis, O-Propyl andO-isopropyl phenyl phosphonochloridothioatesContinuing the kinetic studies on the pyridinolyses of thephosphonochloridothioates, the nucleophilic substitutionreactions of O-propyl (4) and O-isopropyl (5) phenylphosphonochloridothioates with X-pyridines have beencarried out kinetically in acetonitrile (MeCN) at 35.0 ± 0.1oC (Scheme 1). The kinetic results of the present work arecompared with those of the pydidinolyses of Y-O-arylmethyl [1; Me(YC

N2 mechanism is proposed for the anilinolyses of 1, 3 and 4. The anilinolysis rates of the phosphonochloridothioates are predominantly dependent upon the steric effects over the inductive effects of the two ligands. The deuterium kinetic isotope effects (DKIEs; kH/kD) are primary normal with 1 and 3, while secondary inverse with 4. Primary normal and secondary inverse DKIEs are rationalized by frontside and backside nucleophilic attack transition state, respectively. The DKIEs of the phosphonochloridothioates do not have any consistent correlations with the two ligands.

Agency for Defense Development, P.O. Box 35-5, Yuseong, Daejeon 305-600, KoreaReceived November 27, 2012, Accepted January 8, 2013Prediction of physicochemical properties of organic molecules is an important process in chemistry andchemical engineering. The MSEP approach developed in our lab calculates the molecular surface electrostaticpotential (ESP) on van der Waals (vdW) surfaces of molecules. This approach includes geometry optimizationand frequency calculation using hybrid density functional theory, B3LYP, at the 6-31G(d) basis set to findminima on the potential energy surface, and is known to give satisfactory QSPR results for various propertiesof organic molecules. However, this MSEP method is not applicable to screen large database because geometryoptimization and frequency calculation require considerable computing time. To develop a fast but yet reliableapproach, we have re-examined our previous work on organic molecules using two semi-empirical methods,AM1 and PM3. This new approach can be an efficient protocol in designing new molecules with improvedproperties.Key Words : Organic molecules, MSEP method, Semi-empirical methods, Prediction of physicochemicalproperties, Root-mean-square deviationIntroductionBefore designing a new compound with improved physicalor mechanical property, a usual practice is to predict itsproperties before synthesis. If the virtual candidate meets therequirement, next job is to start synthetic work. If not, theresearcher has to go back to evaluate more compounds. Thiskind of search and prediction method is a tedious job forbench chemists. One of the best methods doing this task is toutilize Quantitative Structure Property Relationship (QSPR)method.

Kinetic studies on the reactions of O-methyl (2) and O-ethyl (3) phenyl phosphonochloridothioates with X-pyridines have been carried out in acetonitrile at 35.0°C. The pyridinolysis rates of 2 are slightly faster than those of 3. The substituent effects of X on the pyridinolysis rates of 2 and 3 are similar. The Hammett and Bronsted plots with X in the nucleophiles are biphasic concave upward with a break point at X = 3-Ph for both substrates. The stepwise mechanism with rate-limiting leaving group departure from the intermediate is proposed based on the βX values and biphasic concave upward free energy relationship for both substrates. The biphasic concave upward free energy relationships are rationalized by a frontside nucleophilic attack TSf with more basic pyridines and backside attack TSb with less basic pyridines for both substrates.

2 mechanism is proposed involving achange of the attacking direction of the X-pyridines from a frontside attack with the strongly basic pyridines toa backside attack with the weakly basic pyridines.Key Words : Thiophosphoryl transfer reaction, Diisopropyl chlorothiophosphate, Pyridinolysis, Biphasic con-cave upward free energy relationshipIntroductionThis lab previously reported the kinetics and mechanismof the pyridinolyses of the chlorothiophosphates in aceto-nitrile (MeCN): dimethyl [1: (MeO)

E-mail: hwlee@inha.ac.krReceived December 8, 2011, Accepted December 12, 2011Key Words : Phosphoryl transfer reaction, Pyridinolysis, Dibutyl chlorophosphate, Steric effectKinetics and mechanism of the phosphoryl and thiophosphoryltransfer reactions have been studied extensively by this lab:pyridinolyses

The kinetic studies on the reactions of phenyl N-phenyl phosphoramidochloridate (8) with substituted anilines () and deuterated anilines () have been carried out in acetonitrile at . The obtained deuterium kinetic isotope effects (DKIEs; ) are huge secondary inverse ( = 0.52-0.69). A concerted mechanism is proposed with a backside attack transition state (TS) on the basis of the secondary inverse DKIEs and the variation trends of the values with X. The degree of bond formation in the TS is really extensive taking into account the very small values of the DKIEs. The steric effects of the two ligands on the rates are extensively discussed for the aminolyses of the chlorophosphate-type substrates on the basis of the Taft equation.

The nucleophilic substitution reactions of O-ethyl phenyl phosphonochloridothioate with substituted anilines () and deuterated anilines () are kinetically investigated in acetonitrile at . The deuterium kinetic isotope effects (DKIEs) invariably increase from a secondary inverse DKIE ( = 0.93) to a primary normal DKIE ( = 1.28) as the substituent of nucleophile (X) changes from electron-donating to electron-withdrawing. These can be rationalized by the gradual transition state (TS) variation from a backside to frontside attack. A concerted mechanism is proposed. A trigonal bipyramidal TS is proposed for a backside attack while a hydrogen-bonded, four-center-type TS is proposed for a frontside attack.

The kinetics and mechanism of the pyridinolysis () of dimethyl isothiocyanophosphate are investigated in acetonitrile at . The Hammett and Brnsted plots for substituent X variations in the nucleophiles exhibit two discrete slopes with a break region between X = 3-Ac and 4-Ac. These are interpreted to indicate a mechanistic change at the break region from a concerted to a stepwise mechanism with a rate-limiting expulsion of the isothiocyanate leaving group from the intermediate. The relatively large values imply much greater fraction of frontside nucleophilic attack TSf than that of backside attack TSb. The steric effects of the two ligands play an important role to determine the pyridinolysis rates of isothiocyanophosphates.

E-mail: hwlee@inha.ac.krReceived January 2, 2012, Accepted January 31, 2012Key Words : Thiophosphoryl transfer reaction, Pyridinolysis, Dibutyl chlorothiophosphate, Biphasic concaveupward free energy relationshipIn previous work, the kinetic studies of the pyridinolysesof chlorothiophosphates (dimethyl [1: (MeO)

< 1. Key Words : Phosphoryl transfer reaction, Anilinolysis, (2R,4R,5S)-(+)-2-Chloro-3,4-dimethyl-5-phenyl-1,3,2-oxazaphospholidine 2-sulfide, Deuterium kinetic isotope effect IntroductionThe anilinolysis rates of cyclic five-membered ring phos-phate esters are much faster than their acyclic counterparts inacetonitrile (MeCN).

The kH and kD values with X-anilines and deuterated Xanilines, respectively, are summarized in Table 1, together with the DKIEs (kH/kD) and Hammett ρX(H and D) and Bronsted βX(H and D) coefficients. The pKa(X) values of the X-anilines in water were used to obtain the Bronsted βX values in MeCN, and this procedure was justified experimentally and theoretically. 3 The values of pKa(X) and σX of the deuterated X-anilines are assumed to be identical to those of the Xanilines. Perrin and coworkers reported that the basicities of β-deuterated analogs of benzylamine, N,N-dimethylaniline and methylamine increase roughly by 0.02 pKa units per deuterium, and that these effects are additive. 4 Thus, the pKa(X) values of deuterated X-anilines may be slightly greater than those of X-anilines, however, the difference is too small to be taken into account. The anilinolysis rate increases with a more electrondonating substituent X in the nucleophile which is consistent with a typical nucleophilic substitution reaction with positive charge development at the nucleophilic reaction center N atom in the transition state (TS). The Hammett (Fig. 1; log kH(D) vs σX) and Bronsted [Fig. 2; log kH(D) vs pKa(X)] plots for substituent X variations in the nucleophiles give considerably large magnitudes of ρX(H) = –4.83 (ρX(D) = –5.24) and βX(H) = 1.71 (βX(D) = 1.85). The magnitudes of selectivity parameters with the deuterated anilines are slightly greater than those with the anilines. The DKIEs are primary normal (kH/kD > 1) and the values of DKIEs invariably increase as the nucleophile becomes weaker. The remarkably large value of kH/kD = 2.19 with X = 3-Cl is the largest one, observed for the phosphoryl transfer reactions in this lab. 8