99 results on '"Hafezparast, M."'
Search Results
2. Dynein–dynactin complex subunits are differentially localized in brain and spinal cord, with selective involvement in pathological features of neurodegenerative disease
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Ateh, D. D., Hussain, I. K., Mustafa, A. H., Price, K. M., Gulati, R., Nickols, C. D., Bird, M. M., Greensmith, L., Hafezparast, M., Fisher, E. M. C., Baker, C. S., and Martin, J. E.
- Published
- 2008
3. Subcellular functional specificity of dynein-dynactin complex subunits - normal distribution and disturbances in neurodegenerative disease
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Ateh, D D, Hussain, I, Mustafa, A, Price, K M, Nickols, C D, Bird, M M, Greensmith, L, Schiavo, G, Hafezparast, M, Fisher, EMC, Baker, C S, and Martin, J E
- Published
- 2006
4. An extended panel of hamster-human hybrids for chromosome 2q
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Hafezparast, M., Cole, C. G., Kaur, G. P., Athwal, R. S., and Jeggo, P. A.
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- 1994
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5. Subchromosomal localization of a gene (XRCC5) involved in double strand break repair to the region 2q34-36
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Hafezparast, M., Kaur, G. P., Zdzienicka, M., Athwal, R. S., Lehmann, A. R., and Jeggo, P. A.
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- 1993
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6. A hamster-human subchromosomal hybrid cell panel for chromosome 2
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Jeggo, P. A., Hafezparast, M., Thompson, A. F., Kaur, G. P., Sandhu, A. K., and Athwal, R. S.
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- 1993
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7. Mitochondrial protein-linked DNA breaks perturb mitochondrial gene transcription and trigger free radical-induced DNA damage
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Chiang, S.C., Meagher, M., Kassouf, N., Hafezparast, M., McKinnon, P.J., Haywood, R., and El-Khamisy, S.F.
- Abstract
Breakage of one strand of DNA is the most common form of DNA damage. Most damaged DNA termini require end-processing in preparation for ligation. The importance of this step is highlighted by the association of defects in the 3'-end processing enzyme tyrosyl DNA phosphodiesterase 1 (TDP1) and neurodegeneration and by the cytotoxic induction of protein-linked DNA breaks (PDBs) and oxidized nucleic acid intermediates during chemotherapy and radiotherapy. Although much is known about the repair of PDBs in the nucleus, little is known about this process in the mitochondria. We reveal that TDP1 resolves mitochondrial PDBs (mtPDBs), thereby promoting mitochondrial gene transcription. Overexpression of a toxic form of mitochondrial topoisomerase I (TOP1mt*), which generates excessive mtPDBs, results in a TDP1-dependent compensatory up-regulation of mitochondrial gene transcription. In the absence of TDP1, the imbalance in transcription of mitochondrial- and nuclear-encoded electron transport chain (ETC) subunits results in misassembly of ETC complex III. Bioenergetics profiling further reveals that TDP1 promotes oxidative phosphorylation under both basal and high energy demands. It is known that mitochondrial dysfunction results in free radical leakage and nuclear DNA damage; however, the detection of intermediates of radical damage to DNA is yet to be shown. Consequently, we report an increased accumulation of carbon-centered radicals in cells lacking TDP1, using electron spin resonance spectroscopy. Overexpression of the antioxidant enzyme superoxide dismutase 1 (SOD1) reduces carbon-centered adducts and protects TDP1-deficient cells from oxidative stress. Conversely, overexpression of the amyotrophic lateral sclerosis-associated mutant SOD1(G93A) leads to marked sensitivity. Whereas Tdp1 knockout mice develop normally, overexpression of SOD1(G93A) suggests early embryonic lethality. Together, our data show that TDP1 resolves mtPDBs, thereby regulating mitochondrial gene transcription and oxygen consumption by oxidative phosphorylation, thus conferring cellular protection against reactive oxygen species-induced damage.
- Published
- 2017
8. A mathematical understanding of how cytoplasmic dynein walks on microtubules
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Trott, L., primary, Hafezparast, M., additional, and Madzvamuse, A., additional
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- 2018
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9. Neurobiology of axonal transport defects in motor neuron diseases: Opportunities for translational research?
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De Vos, K.J. and Hafezparast, M.
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nervous system - Abstract
Intracellular trafficking of cargoes is an essential process to maintain the structure and function of all mammalian cell types, but especially of neurons because of their extreme axon/dendrite polarisation. Axonal transport mediates the movement of cargoes such as proteins, mRNA, lipids, membrane-bound vesicles and organelles that are mostly synthesised in the cell body and in doing so is responsible for their correct spatiotemporal distribution in the axon, for example at specialised sites such as nodes of Ranvier and synaptic terminals. In addition, axonal transport maintains the essential long-distance communication between the cell body and synaptic terminals that allows neurons to react to their surroundings via trafficking of for example signalling endosomes.\ud \ud Axonal transport defects are a common observation in a variety of neurodegenerative diseases, and mutations in components of the axonal transport machinery have unequivocally shown that impaired axonal transport can cause neurodegeneration (reviewed in El-Kadi et al., 2007, De Vos et al., 2008; Millecamps and Julien, 2013). Here we review our current understanding of axonal transport defects and the role they play in motor neuron diseases (MNDs) with a specific focus on the most common form of MND, amyotrophic lateral sclerosis (ALS).
- Published
- 2017
10. A DYNC1H1 mutation in autosomal dominant spinal muscular atrophy shows the potential of pharmacological inhibition of histone deacetylase 6 as a treatment for disease associated cellular phenotypes
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Green, R., Simoes, F. A., Reyes-Aldasoro, C. C., Rossor, A. M., Scoto, M., Barri, M., Greensmith, L., Muntoni, F., Reilly, M. M., and Hafezparast, M.
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TK ,RC - Abstract
Background: Spinal muscular atrophy with lower extremity predominance (SMA-LED) is an autosomal dominant congenital motor neuron disease. The condition presents with distal limb weakness and muscle atrophy, further compounded with intellectual disability. The most common cause are mutations in dynein cytoplasmic 1 heavy chain 1 (DYNC1H1; OMIM:600112), which encodes the largest subunit of cytoplasmic dynein 1. Dynein is defined by its role as a retrogradely oriented molecular motor but it is also fundamental to other cellular processes including growth cone dynamics and regulation of the Golgi apparatus. Moreover, mutations in dynactin 1 (DCTN1; OMIM: 601143) encoding p150 (Glued) subunit of the dynactin complex, which regulates cytoplasmic dynein function, cause autosomal dominant distal hereditary motor neuronopathy. \ud Objective: To dissect common molecular mechanisms underlying motor neuron degeneration caused by R399G and D338N mutations in DYNC1H1. \ud Methods: Immunofluorescence was performed on patient fibroblasts harbouring the R399G or D338N DYNC1H1 mutation to assess the integrity of the Golgi apparatus and the localization of dynein to the organelle. Modifications of microtubules and the interaction of dynein with golgin-160 were investigated using biochemical analysis. \ud Results: Decreased a-tubulin acetylation was a common molecular phenotype in patient fibroblasts harbouring the R399G (p50.05, N=3) or D338N (p50.01, N=5) mutation in comparison to wild-type fibroblasts (N=3 and N=5, respectively). However, only the R399G mutant fibroblasts (N=20) exhibited a significant (p50.0001) decrease of dynein at the Golgi apparatus in comparison to wild-type cells (N=21). Uniquely, the R399G mutation also caused a significant and inherent fragmentation of the Golgi apparatus, which correlated with the zygosity of the mutation (+/R339G p50.01 N=4, R399G/R399G p50.0001 N=4). A consequent compensational response was measured as an increased interaction between the dynein intermediate chain and golgin-160 in the R399G mutant cells. Excitingly, the treatment of R399G mutant fibroblasts with tubacin (N=32), an HDAC6 inhibitor, caused a striking statistically significant (p50.0001) amelioration of the Golgi apparatus integrity by increasing microtubule acetylation in comparison to untreated R399G mutant fibroblasts (N=33). \ud Discussion and conclusions: Using DYNC1H1 mutations we illustrate a dynein-dependent acetylation of the microtubule network, which if aberrant and compounded by a decrease in the amount of dynein present on the Golgi membranes results in the fragmentation of the organelle. Intriguingly, a-tubulin acetylation, is significantly reduced in motor neurons harbouring ALS associated mutant TUBA4A (OMIM: 191110). These data suggest a tentative link between genetic variations in DYNC1H1 and the microtubule cytoskeleton, which could contribute to aberrant tubulin modification, Golgi integrity, and axonal transport and consequently susceptibility to ALS. Importantly, we show that ameliorating the microtubule acetylation is sufficient to rescue the Golgi integrity, thereby providing a potential therapeutic target for this pathology.
- Published
- 2016
11. The phagocytic capacity of neurones
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Bowen, S, Ateh, D, Deinhardt, K, Bird, M, Price, K, Baker, C, Robson, J, Swash, M, Shamsuddin, W, Kawar, S, El-Tawil, T, Roos, J, Hoyle, A, Nickols, C, Knowles, C, Pullen, A, Luthert, P, Weller, R, Hafezparast, M, Franklin, R, Revesz, T, King, R, Berninghausen, O, Fisher, E, and Schiavo, G
- Abstract
Phagocytosis is defined as the ingestion of particulates over 0.5 microm in diameter and is associated with cells of the immune system such as macrophages or monocytes. Neurones are not generally recognized to be phagocytic. Using light, confocal, time-lapse and electron microscopy, we carried out a wide range of in-vitro and in-vivo experiments to examine the phagocytic capacity of different neuronal cell types. We demonstrated phagocytosis of material by neurones, including cell debris and synthetic particles up to 2.8 microm in diameter. We showed phagocytosis in different neuronal types, and demonstrated that debris can be transported from neurite extremities to cell bodies and persist within neurones. Flow cytometry analysis demonstrated the lack of certain complement receptors on neurones but the presence of others, including integrin receptors known to mediate macrophage phagocytosis, indicating that a restricted set of phagocytosis receptors may mediate this process. Neuronal phagocytosis occurs in vitro and in vivo, and we propose that this is a more widespread and significant process than previously recognized. Neuronal phagocytosis may explain certain inclusions in neurones during disease, cell-to-cell spread of disease, neuronal death during disease progression and provide a potential mechanism for therapeutic intervention through the delivery of particulate drug carriers.
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- 2016
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12. Expression of a pathogenic mutation of SOD1 sensitizes aprataxin-deficient cells and mice to oxidative stress and triggers hallmarks of premature ageing
- Author
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Carroll, J., Page, T. K. W., Chiang, S-C., Kalmar, B., Bode, D., Greensmith, L., Mckinnon, P. J., Thorpe, J. R., Hafezparast, M., and El-Khamisy, S. F.
- Abstract
Aprataxin (APTX) deficiency causes progressive cerebellar degeneration, ataxia and oculomotor apraxia in man. Cell free assays and crystal structure studies demonstrate a role for APTX in resolving 5′-adenylated nucleic acid breaks, however, APTX function in vertebrates remains unclear due to the lack of an appropriate model system. Here, we generated a murine model in which a pathogenic mutant of superoxide dismutase 1 (SOD1G93A) is expressed in an Aptx−/− mouse strain. We report a delayed population doubling and accelerated senescence in Aptx−/− primary mouse fibroblasts, which is not due to detectable telomere instability or cell cycle deregulation but is associated with a reduction in transcription recovery following oxidative stress. Expression of SOD1G93A uncovers a survival defect ex vivo in cultured cells and in vivo in tissues lacking Aptx. The surviving neurons feature numerous and deep nuclear envelope invaginations, a hallmark of cellular stress. Furthermore, they possess an elevated number of high-density nuclear regions and a concomitant increase in histone H3 K9 trimethylation, hallmarks of silenced chromatin. Finally, the accelerated cellular senescence was also observed at the organismal level as shown by down-regulation of insulin-like growth factor 1 (IGF-1), a hallmark of premature ageing. Together, this study demonstrates a protective role of Aptx in vivo and suggests that its loss results in progressive accumulation of DNA breaks in the nervous system, triggering hallmarks of premature ageing, systemically.
- Published
- 2015
13. Modulation of cytoplasmic dynein and tubulin modification as potential therapeutic targets in SMA-LED
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Green, R.L., primary, Simoes, F.A., additional, Reyes-Aldasoro, C.C., additional, Rossor, A.M., additional, Scoto, M., additional, Barri, M., additional, Sedlakova, Z., additional, Greensmith, L., additional, Muntoni, F., additional, Reilly, M.M., additional, and Hafezparast, M., additional
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- 2017
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14. S03 - Modulation of cytoplasmic dynein and tubulin modification as potential therapeutic targets in SMA-LED
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Green, R.L., Simoes, F.A., Reyes-Aldasoro, C.C., Rossor, A.M., Scoto, M., Barri, M., Sedlakova, Z., Greensmith, L., Muntoni, F., Reilly, M.M., and Hafezparast, M.
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- 2017
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15. P.6.7 Wide phenotypic spectrum of SMA with lower limbs predominance due to mutations in the tail domain of DYNC1H1 gene: A case series
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Scoto, M., primary, Rossor, A., additional, Harms, M.B., additional, Calissano, M., additional, Cirak, S., additional, Foley, A.R., additional, Sewry, C., additional, Hafezparast, M., additional, Robb, S., additional, Manzur, A.Y., additional, Baloh, R.H., additional, Reilly, M.M., additional, and Muntoni, F., additional
- Published
- 2013
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16. O.10 Mutations in a new dynein/dynactin adaptor gene cause Dominant Congenital Spinal Muscular Atrophy (DCSMA) and Hereditary Spastic Paraplegia (HSP)
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Oates, E.C., primary, Rosser, A.M., additional, Hafezparast, M., additional, Lek, M., additional, Scoto, M., additional, Greensmith, L., additional, Auer-Grumbach, M., additional, Schule, R., additional, Herrmann, D.N., additional, Clarke, N.F., additional, MacArthur, D.G., additional, Züchner, S., additional, Muntoni, F., additional, Reilly, M.M., additional, and North, K.N., additional
- Published
- 2013
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17. Behavioral and Other Phenotypes in a Cytoplasmic Dynein Light Intermediate Chain 1 Mutant Mouse
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Banks, G. T., primary, Haas, M. A., additional, Line, S., additional, Shepherd, H. L., additional, AlQatari, M., additional, Stewart, S., additional, Rishal, I., additional, Philpott, A., additional, Kalmar, B., additional, Kuta, A., additional, Groves, M., additional, Parkinson, N., additional, Acevedo-Arozena, A., additional, Brandner, S., additional, Bannerman, D., additional, Greensmith, L., additional, Hafezparast, M., additional, Koltzenburg, M., additional, Deacon, R., additional, Fainzilber, M., additional, and Fisher, E. M. C., additional
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- 2011
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18. Dynein-dynactin complex subunits are differentially localized in brain and spinal cord, with selective involvement in pathological features of neurodegenerative disease
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Ateh, D. D., primary, Hussain, I. K., additional, Mustafa, A. H., additional, Price, K. M., additional, Gulati, R., additional, Nickols, C. D., additional, Bird, M. M., additional, Greensmith, L., additional, Hafezparast, M., additional, Fisher, E. M. C., additional, Baker, C. S., additional, and Martin, J. E., additional
- Published
- 2007
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19. Wasted by an elongation factor
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Hafezparast, M, primary
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- 1998
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20. SHIRPA, a protocol for behavioral assessment: validation for longitudinal study of neurological dysfunction in mice
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Rogers, D. C., Peters, J., Martin, J. E., Ball, S., Nicholson, S. J., Witherden, A. S., Hafezparast, M., Latcham, J., Robinson, T. L., and Quilter, C. A.
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- 2001
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21. Complementation Analysis of Testis Tumor Cells
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Wang, X., Hafezparast, M., and Masters, J. R. W.
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- 1997
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22. The kinesin light chain gene: its mapping and exclusion in mouse and human forms of inherited motor neuron degeneration
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Hafezparast, M., Witherden, A., Nicholson, S., Bermingham, N., Mackin, J., Asbroek, A. ten, Ball, S., Peters, J., Baas, F., and Martin, J.E.
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- 1999
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23. NF1 mice: smaller brains but no tumours
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Hafezparast, M.
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- 2001
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24. Polyglutamine diseases
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Hafezparast, M. and Fisher, E.
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- 1999
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25. Severe dynein dysfunction in cholinergic neurons exacerbates ALS-like phenotypes in a new mouse model.
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Simoes FA, Christoforidou E, Cassel R, Dupuis L, and Hafezparast M
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- Animals, Mice, Cytoplasmic Dyneins metabolism, Cytoplasmic Dyneins genetics, Neuromuscular Junction metabolism, Neuromuscular Junction pathology, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Mice, Knockout, Male, Dyneins metabolism, Dyneins genetics, Point Mutation, Disease Models, Animal, Amyotrophic Lateral Sclerosis metabolism, Amyotrophic Lateral Sclerosis genetics, Amyotrophic Lateral Sclerosis pathology, Phenotype, Cholinergic Neurons metabolism, Cholinergic Neurons pathology
- Abstract
Cytoplasmic dynein 1, a motor protein essential for retrograde axonal transport, is increasingly implicated in the pathogenesis of neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS). In this study, we developed a novel mouse model that combines the Legs at odd angles (Loa, F580Y) point mutation in the dynein heavy chain with a cholinergic neuron-specific knockout of the dynein heavy chain. This model, for the first time, allows us to investigate the impact of Loa allele exclusivity in these neurons into adulthood. Our findings reveal that this selective increase in dynein dysfunction exacerbated the phenotypes observed in heterozygous Loa mice including pre-wean survival, reduced body weight and grip strength. Additionally, it induced ALS-like pathology in neuromuscular junctions (NMJs) not seen in heterozygous Loa mice. Notably, we also found a previously unobserved significant increase in neurons displaying TDP-43 puncta in both Loa mutants, suggesting early TDP-43 mislocalisation - a hallmark of ALS. The novel model also exhibited a concurrent rise in p62 puncta that did not co-localise with TDP-43, indicating broader impairments in autophagic clearance mechanisms. Overall, this new model underscores the fact that dynein impairment alone can induce ALS-like pathology and provides a valuable platform to further explore the role of dynein in ALS., Competing Interests: Declaration of competing interest The author EC holds shares in Thermo Fisher Scientific and various index funds which may include companies whose products were used in the research reported in this article. Additionally, EC has been engaged in a compensated collaboration with Thermo Fisher Scientific for promotional activities unrelated to this research. These potential financial interests do not influence the design, execution, or interpretation of the research findings presented in this article. All other authors declare no competing interests., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2025
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26. An ALS-associated mutation dysregulates microglia-derived extracellular microRNAs in a sex-specific manner.
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Christoforidou E, Moody L, Joilin G, Simoes FA, Gordon D, Talbot K, and Hafezparast M
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- Animals, Female, Male, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Mice, Extracellular Space metabolism, Humans, Lipopolysaccharides pharmacology, Gene Expression Regulation, Microglia metabolism, Microglia pathology, Amyotrophic Lateral Sclerosis genetics, Amyotrophic Lateral Sclerosis pathology, MicroRNAs genetics, MicroRNAs metabolism, Mice, Transgenic, Mutation genetics, Sex Characteristics
- Abstract
Evidence suggests the presence of microglial activation and microRNA (miRNA) dysregulation in amyotrophic lateral sclerosis (ALS), the most common form of adult motor neuron disease. However, few studies have investigated whether the miRNA dysregulation originates from microglia. Furthermore, TDP-43 (encoded by TARDBP), involved in miRNA biogenesis, aggregates in tissues of ∼98% of ALS cases. Thus, this study aimed to determine whether expression of the ALS-linked TDP-43M337V mutation in a transgenic mouse model dysregulates microglia-derived miRNAs. RNA sequencing identified several dysregulated miRNAs released by transgenic microglia and a differential miRNA release by lipopolysaccharide-stimulated microglia, which was more pronounced in cells from female mice. We validated the downregulation of three candidate miRNAs, namely, miR-16-5p, miR-99a-5p and miR-191-5p, by reverse transcription quantitative polymerase chain reaction (RT-qPCR) and identified their predicted targets, which primarily include genes involved in neuronal development and function. These results suggest that altered TDP-43 function leads to changes in the miRNA population released by microglia, which may in turn be a source of the miRNA dysregulation observed in the disease. This has important implications for the role of neuroinflammation in ALS pathology and could provide potential therapeutic targets., Competing Interests: Competing interests E.C. holds shares in Thermo Fisher Scientific and various index funds, which may include companies whose products were used in the research reported in this article. Additionally, E.C. has been engaged in a compensated collaboration with Thermo Fisher Scientific for promotional activities unrelated to this research. These potential financial interests do not influence the design, execution or interpretation of the research findings presented in this article. All other authors declare no competing interests., (© 2024. Published by The Company of Biologists Ltd.)
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- 2024
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27. Aberrant dynein function promotes TDP-43 aggregation and upregulation of p62 in male mice harboring transgenic human TDP-43.
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Christoforidou E, Simoes FA, Gordon D, Talbot K, and Hafezparast M
- Abstract
Objective: Most TDP-43 mouse models of ALS do not display cytoplasmic mislocalisation or protein aggregation of TDP-43 in spinal motor neurons in vivo . Thus, we investigated whether a combination of defective dynein with a TDP-43 mutation could trigger TDP-43 pathology., Methods: Using immunohistochemical methods we examined the intracellular motor neuron pathology of the offspring of TDP-43
WT and TDP-43M337V transgenic mice bred to heterozygous Loa mice, which carry an autosomal dominant mutation in dynein cytoplasmic 1 heavy chain 1 ( Dync1h1 )., Results: These mice did not exhibit TDP-43 mislocalisation in spinal motor neurons, but the expression of mutant dynein in combination with wildtype human TDP-43 resulted in p62 upregulation and TDP-43 aggregation, thus partially recapitulating the human disease., Conclusions: These findings provide new insights into the possible relationship between dynein and TDP-43 and could prove useful in future studies looking to elucidate the mechanism behind the TDP-43 pathology observed in ALS.- Published
- 2023
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28. A case for non-coding RNA as a suitable biomarker of amyotrophic lateral sclerosis.
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Joilin G and Hafezparast M
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- Humans, Biomarkers, RNA, Untranslated, Amyotrophic Lateral Sclerosis diagnosis, Amyotrophic Lateral Sclerosis genetics
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- 2023
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29. Profiling non-coding RNA expression in cerebrospinal fluid of amyotrophic lateral sclerosis patients.
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Joilin G, Gray E, Thompson AG, Talbot K, Leigh PN, Newbury SF, Turner MR, and Hafezparast M
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- Humans, Biomarkers, Cohort Studies, Amyotrophic Lateral Sclerosis genetics, Amyotrophic Lateral Sclerosis diagnosis, Amyotrophic Lateral Sclerosis pathology, Neurodegenerative Diseases, MicroRNAs
- Abstract
Introduction: Objective biomarkers for the fatal neurodegenerative disease amyotrophic lateral sclerosis or motor neuron disease (ALS/MND) are critical for diagnosis, drug development, clinical trials, and insight into disease pathology. Key candidates for biomarkers present in biofluids include non-coding RNA (ncRNA) transcripts including microRNA, piwi-interacting RNA and transfer RNA. To determine if the central nervous system was the source of the dysregulated ncRNA biomarkers we previously observed in serum, we sought to identify dysregulated ncRNA candidates in cerebrospinal fluid (CSF) which may provide new insight into the disease pathology., Methods and Materials: Small RNA sequencing (RNA-seq) was undertaken on CSF samples from healthy controls ( n = 18), disease mimics ( n = 8), and ALS patients ( n = 40) in our Oxford Study for Biomarkers of ALS cohort, with RT-qPCR used to confirm their dysregulation., Results: We found a range of ncRNA that were dysregulated in the RNA-seq screen, but these failed to be validated or detected in some cases using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Additionally, our previously identified serum ncRNA biomarker showed no change in CSF or correlation to serum., Conclusions: This study suggests the CSF may not be the source of dysregulated ncRNA in the serum and highlights the difficulty in identifying ncRNA in CSF as biomarkers for ALS.KEY MESSAGESIn this current study, we investigated the expression of non-coding RNA transcripts in the cerebrospinal fluid of ALS patients compared to healthy controls.RNA-seq identified dysregulated non-coding RNA transcripts, but these were not validated with RT-qPCR.We conclude that cerebrospinal fluid is not a suitable source of diagnostic biomarkers.
- Published
- 2022
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30. Potential of Non-Coding RNA as Biomarkers for Progressive Supranuclear Palsy.
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Simoes FA, Joilin G, Peters O, Schneider LS, Priller J, Spruth EJ, Vogt I, Kimmich O, Spottke A, Hoffmann DC, Falkenburger B, Brandt M, Prudlo J, Brockmann K, Fries FL, Rowe JB, Church A, Respondek G, Newbury SF, Leigh PN, Morris HR, Höglinger GU, and Hafezparast M
- Subjects
- Humans, Biomarkers, Down-Regulation, Supranuclear Palsy, Progressive diagnosis, Supranuclear Palsy, Progressive genetics, MicroRNAs genetics
- Abstract
Objective markers for the neurodegenerative disorder progressive supranuclear palsy (PSP) are needed to provide a timely diagnosis with greater certainty. Non-coding RNA (ncRNA), including microRNA, piwi-interacting RNA, and transfer RNA, are good candidate markers in other neurodegenerative diseases, but have not been investigated in PSP. Therefore, as proof of principle, we sought to identify whether they were dysregulated in matched serum and cerebrospinal fluid (CSF) samples of patients with PSP. Small RNA-seq was undertaken on serum and CSF samples from healthy controls (n = 20) and patients with PSP (n = 31) in two cohorts, with reverse transcription-quantitative PCR (RT-qPCR) to confirm their dysregulation. Using RT-qPCR, we found in serum significant down-regulation in hsa-miR-92a-3p, hsa-miR-626, hsa-piR-31068, and tRNA-ValCAC. In CSF, both hsa-let-7a-5p and hsa-piR-31068 showed significant up-regulation, consistent with their changes observed in the RNA-seq results. Interestingly, we saw no correlation in the expression of hsa-piR-31068 within our matched serum and CSF samples, suggesting there is no common dysregulatory mechanism between the two biofluids. While these changes were in a small cohort of samples, we have provided novel evidence that ncRNA in biofluids could be possible diagnostic biomarkers for PSP and further work will help to expand this potential.
- Published
- 2022
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31. Potential of activated microglia as a source of dysregulated extracellular microRNAs contributing to neurodegeneration in amyotrophic lateral sclerosis.
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Christoforidou E, Joilin G, and Hafezparast M
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- Animals, Extracellular Vesicles metabolism, Humans, Microglia pathology, Nerve Degeneration pathology, Amyotrophic Lateral Sclerosis metabolism, Amyotrophic Lateral Sclerosis pathology, Cell Communication physiology, MicroRNAs metabolism, Microglia metabolism, Nerve Degeneration metabolism
- Abstract
Amyotrophic lateral sclerosis (ALS) is the most common form of motor neuron degeneration in adults, and several mechanisms underlying the disease pathology have been proposed. It has been shown that glia communicate with other cells by releasing extracellular vesicles containing proteins and nucleic acids, including microRNAs (miRNAs), which play a role in the post-transcriptional regulation of gene expression. Dysregulation of miRNAs is commonly observed in ALS patients, together with inflammation and an altered microglial phenotype. However, the role of miRNA-containing vesicles in microglia-to-neuron communication in the context of ALS has not been explored in depth. This review summarises the evidence for the presence of inflammation, pro-inflammatory microglia and dysregulated miRNAs in ALS, then explores how microglia may potentially be responsible for this miRNA dysregulation. The possibility of pro-inflammatory ALS microglia releasing miRNAs which may then enter neuronal cells to contribute to degeneration is also explored. Based on the literature reviewed here, microglia are a likely source of dysregulated miRNAs and potential mediators of neurodegenerative processes. Therefore, dysregulated miRNAs may be promising candidates for the development of therapeutic strategies.
- Published
- 2020
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32. Identification of a potential non-coding RNA biomarker signature for amyotrophic lateral sclerosis.
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Joilin G, Gray E, Thompson AG, Bobeva Y, Talbot K, Weishaupt J, Ludolph A, Malaspina A, Leigh PN, Newbury SF, Turner MR, and Hafezparast M
- Abstract
Objective biomarkers for the clinically heterogeneous adult-onset neurodegenerative disorder amyotrophic lateral sclerosis are crucial to facilitate assessing emerging therapeutics and improve the diagnostic pathway in what is a clinically heterogeneous syndrome. With non-coding RNA transcripts including microRNA, piwi-RNA and transfer RNA present in human biofluids, we sought to identify whether non-coding RNA in serum could be biomarkers for amyotrophic lateral sclerosis. Serum samples from our Oxford Study for Biomarkers in motor neurone disease/amyotrophic lateral sclerosis discovery cohort of amyotrophic lateral sclerosis patients (n = 48), disease mimics (n = 16) and age- and sex-matched healthy controls (n = 24) were profiled for non-coding RNA expression using RNA-sequencing, which showed a wide range of non-coding RNA to be dysregulated. We confirmed significant alterations with reverse transcription-quantitative PCR in the expression of hsa-miR-16-5p, hsa-miR-21-5p, hsa-miR-92a-3p, hsa-piR-33151, TRV-AAC4-1.1 and TRA-AGC6-1.1. Furthermore, hsa-miR-206, a previously identified amyotrophic lateral sclerosis biomarker, showed a binary-like pattern of expression in our samples. Using the expression of these non-coding RNA, we were able to discriminate amyotrophic lateral sclerosis samples from healthy controls in our discovery cohort using a random forest analysis with 93.7% accuracy with promise in predicting progression rate of patients. Importantly, cross-validation of this novel signature using a new geographically distinct cohort of samples from the United Kingdom and Germany with both amyotrophic lateral sclerosis and control samples (n = 156) yielded an accuracy of 73.9%. The high prediction accuracy of this non-coding RNA-based biomarker signature, even across heterogeneous cohorts, demonstrates the strength of our approach as a novel platform to identify and stratify amyotrophic lateral sclerosis patients., Competing Interests: Competing Interests The authors report no competing interests.
- Published
- 2020
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33. Corrigendum: An Overview of MicroRNAs as Biomarkers of ALS.
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Joilin G, Leigh PN, Newbury SF, and Hafezparast M
- Abstract
[This corrects the article DOI: 10.3389/fneur.2019.00186.]., (Copyright © 2019 Joilin, Leigh, Newbury and Hafezparast.)
- Published
- 2019
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34. An Overview of MicroRNAs as Biomarkers of ALS.
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Joilin G, Leigh PN, Newbury SF, and Hafezparast M
- Abstract
Amyotrophic lateral sclerosis (ALS; MND, motor neuron disease) is a debilitating neurodegenerative disease affecting 4.5 per 100,000 people per year around the world. There is currently no cure for this disease, and its causes are relatively unknown. Diagnosis is based on a battery of clinical tests up to a year after symptom onset, with no robust markers of diagnosis or disease progression currently identified. A major thrust of current research is to identify potential non-invasive markers ("biomarkers") in body fluids such as blood and/or cerebrospinal fluid (CSF) to use for diagnostic or prognostic purposes. Non-coding RNAs (ncRNAs), including microRNAs (miRNAs), are found at detectable and stable levels in blood and other bodily fluids. Specific ncRNAs can vary in levels between ALS patients and non-ALS controls without the disease. In this review, we will provide an overview of early findings, demonstrate the potential of this new class as biomarkers, and discuss future challenges and opportunities taking this forward to help patients with ALS.
- Published
- 2019
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35. FUS (fused in sarcoma) is a component of the cellular response to topoisomerase I-induced DNA breakage and transcriptional stress.
- Author
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Martinez-Macias MI, Moore DA, Green RL, Gomez-Herreros F, Naumann M, Hermann A, Van Damme P, Hafezparast M, and Caldecott KW
- Subjects
- A549 Cells, Amyotrophic Lateral Sclerosis genetics, Animals, Binding Sites, Brain cytology, Brain embryology, Chromatin metabolism, DNA Repair, Fibroblasts metabolism, HeLa Cells, Humans, Mice, Mutant Proteins, Mutation genetics, Neural Stem Cells metabolism, Neurons metabolism, RNA Polymerase I metabolism, RNA Polymerase II metabolism, RNA-Binding Protein FUS metabolism, Amyotrophic Lateral Sclerosis pathology, DNA Breaks, Double-Stranded, DNA Topoisomerases, Type I metabolism, RNA-Binding Protein FUS genetics, Transcription, Genetic
- Abstract
FUS (fused in sarcoma) plays a key role in several steps of RNA metabolism, and dominant mutations in this protein are associated with neurodegenerative diseases. Here, we show that FUS is a component of the cellular response to topoisomerase I (TOP1)-induced DNA breakage; relocalising to the nucleolus in response to RNA polymerase II (Pol II) stalling at sites of TOP1-induced DNA breaks. This relocalisation is rapid and dynamic, reversing following the removal of TOP1-induced breaks and coinciding with the recovery of global transcription. Importantly, FUS relocalisation following TOP1-induced DNA breakage is associated with increased FUS binding at sites of RNA polymerase I transcription in ribosomal DNA and reduced FUS binding at sites of RNA Pol II transcription, suggesting that FUS relocates from sites of stalled RNA Pol II either to regulate pre-mRNA processing during transcriptional stress or to modulate ribosomal RNA biogenesis. Importantly, FUS-mutant patient fibroblasts are hypersensitive to TOP1-induced DNA breakage, highlighting the possible relevance of these findings to neurodegeneration., (© 2019 Martinez-Macias et al.)
- Published
- 2019
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36. Neurobiology of axonal transport defects in motor neuron diseases: Opportunities for translational research?
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De Vos KJ and Hafezparast M
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- Animals, Humans, Axonal Transport physiology, Motor Neuron Disease physiopathology, Neurobiology, Translational Research, Biomedical methods
- Abstract
Intracellular trafficking of cargoes is an essential process to maintain the structure and function of all mammalian cell types, but especially of neurons because of their extreme axon/dendrite polarisation. Axonal transport mediates the movement of cargoes such as proteins, mRNA, lipids, membrane-bound vesicles and organelles that are mostly synthesised in the cell body and in doing so is responsible for their correct spatiotemporal distribution in the axon, for example at specialised sites such as nodes of Ranvier and synaptic terminals. In addition, axonal transport maintains the essential long-distance communication between the cell body and synaptic terminals that allows neurons to react to their surroundings via trafficking of for example signalling endosomes. Axonal transport defects are a common observation in a variety of neurodegenerative diseases, and mutations in components of the axonal transport machinery have unequivocally shown that impaired axonal transport can cause neurodegeneration (reviewed in El-Kadi et al., 2007, De Vos et al., 2008; Millecamps and Julien, 2013). Here we review our current understanding of axonal transport defects and the role they play in motor neuron diseases (MNDs) with a specific focus on the most common form of MND, amyotrophic lateral sclerosis (ALS)., (Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2017
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37. Mitochondrial protein-linked DNA breaks perturb mitochondrial gene transcription and trigger free radical-induced DNA damage.
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Chiang SC, Meagher M, Kassouf N, Hafezparast M, McKinnon PJ, Haywood R, and El-Khamisy SF
- Subjects
- Animals, DNA, Mitochondrial genetics, Mice, Mice, Knockout, Mitochondrial Proteins genetics, Oxidative Phosphorylation, Oxygen Consumption, Phosphoric Diester Hydrolases genetics, DNA Damage, DNA, Mitochondrial metabolism, Mitochondrial Proteins metabolism, Phosphoric Diester Hydrolases metabolism, Reactive Oxygen Species metabolism, Transcription, Genetic
- Abstract
Breakage of one strand of DNA is the most common form of DNA damage. Most damaged DNA termini require end-processing in preparation for ligation. The importance of this step is highlighted by the association of defects in the 3'-end processing enzyme tyrosyl DNA phosphodiesterase 1 (TDP1) and neurodegeneration and by the cytotoxic induction of protein-linked DNA breaks (PDBs) and oxidized nucleic acid intermediates during chemotherapy and radiotherapy. Although much is known about the repair of PDBs in the nucleus, little is known about this process in the mitochondria. We reveal that TDP1 resolves mitochondrial PDBs (mtPDBs), thereby promoting mitochondrial gene transcription. Overexpression of a toxic form of mitochondrial topoisomerase I (TOP1mt*), which generates excessive mtPDBs, results in a TDP1-dependent compensatory up-regulation of mitochondrial gene transcription. In the absence of TDP1, the imbalance in transcription of mitochondrial- and nuclear-encoded electron transport chain (ETC) subunits results in misassembly of ETC complex III. Bioenergetics profiling further reveals that TDP1 promotes oxidative phosphorylation under both basal and high energy demands. It is known that mitochondrial dysfunction results in free radical leakage and nuclear DNA damage; however, the detection of intermediates of radical damage to DNA is yet to be shown. Consequently, we report an increased accumulation of carbon-centered radicals in cells lacking TDP1, using electron spin resonance spectroscopy. Overexpression of the antioxidant enzyme superoxide dismutase 1 (SOD1) reduces carbon-centered adducts and protects TDP1-deficient cells from oxidative stress. Conversely, overexpression of the amyotrophic lateral sclerosis-associated mutant SOD1
G93A leads to marked sensitivity. Whereas Tdp1 knockout mice develop normally, overexpression of SOD1G93A suggests early embryonic lethality. Together, our data show that TDP1 resolves mtPDBs, thereby regulating mitochondrial gene transcription and oxygen consumption by oxidative phosphorylation, thus conferring cellular protection against reactive oxygen species-induced damage.- Published
- 2017
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38. Novel mutations expand the clinical spectrum of DYNC1H1-associated spinal muscular atrophy.
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Scoto M, Rossor AM, Harms MB, Cirak S, Calissano M, Robb S, Manzur AY, Martínez Arroyo A, Rodriguez Sanz A, Mansour S, Fallon P, Hadjikoumi I, Klein A, Yang M, De Visser M, Overweg-Plandsoen WC, Baas F, Taylor JP, Benatar M, Connolly AM, Al-Lozi MT, Nixon J, de Goede CG, Foley AR, Mcwilliam C, Pitt M, Sewry C, Phadke R, Hafezparast M, Chong WK, Mercuri E, Baloh RH, Reilly MM, and Muntoni F
- Subjects
- Adolescent, Adult, Aged, 80 and over, Brain pathology, Child, Child, Preschool, Cohort Studies, Family, Humans, Infant, Leg pathology, Leg physiopathology, Middle Aged, Muscular Atrophy, Spinal pathology, Muscular Atrophy, Spinal physiopathology, Phenotype, Young Adult, Cytoplasmic Dyneins genetics, Muscular Atrophy, Spinal genetics, Mutation
- Abstract
Objective: To expand the clinical phenotype of autosomal dominant congenital spinal muscular atrophy with lower extremity predominance (SMA-LED) due to mutations in the dynein, cytoplasmic 1, heavy chain 1 (DYNC1H1) gene., Methods: Patients with a phenotype suggestive of a motor, non-length-dependent neuronopathy predominantly affecting the lower limbs were identified at participating neuromuscular centers and referred for targeted sequencing of DYNC1H1., Results: We report a cohort of 30 cases of SMA-LED from 16 families, carrying mutations in the tail and motor domains of DYNC1H1, including 10 novel mutations. These patients are characterized by congenital or childhood-onset lower limb wasting and weakness frequently associated with cognitive impairment. The clinical severity is variable, ranging from generalized arthrogryposis and inability to ambulate to exclusive and mild lower limb weakness. In many individuals with cognitive impairment (9/30 had cognitive impairment) who underwent brain MRI, there was an underlying structural malformation resulting in polymicrogyric appearance. The lower limb muscle MRI shows a distinctive pattern suggestive of denervation characterized by sparing and relative hypertrophy of the adductor longus and semitendinosus muscles at the thigh level, and diffuse involvement with relative sparing of the anterior-medial muscles at the calf level. Proximal muscle histopathology did not always show classic neurogenic features., Conclusion: Our report expands the clinical spectrum of DYNC1H1-related SMA-LED to include generalized arthrogryposis. In addition, we report that the neurogenic peripheral pathology and the CNS neuronal migration defects are often associated, reinforcing the importance of DYNC1H1 in both central and peripheral neuronal functions., (© 2015 American Academy of Neurology.)
- Published
- 2015
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39. Expression of a pathogenic mutation of SOD1 sensitizes aprataxin-deficient cells and mice to oxidative stress and triggers hallmarks of premature ageing.
- Author
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Carroll J, Page TK, Chiang SC, Kalmar B, Bode D, Greensmith L, Mckinnon PJ, Thorpe JR, Hafezparast M, and El-Khamisy SF
- Subjects
- Aging, Premature genetics, Aging, Premature pathology, Animals, Cells, Cultured, Cellular Senescence drug effects, Disease Models, Animal, Humans, Hydrogen Peroxide pharmacology, Insulin-Like Growth Factor I metabolism, Mice, Mutation, Oxidative Stress, Superoxide Dismutase metabolism, Superoxide Dismutase-1, Aging, Premature metabolism, DNA-Binding Proteins deficiency, Motor Neurons pathology, Nuclear Proteins deficiency, Superoxide Dismutase genetics, Transcription, Genetic drug effects
- Abstract
Aprataxin (APTX) deficiency causes progressive cerebellar degeneration, ataxia and oculomotor apraxia in man. Cell free assays and crystal structure studies demonstrate a role for APTX in resolving 5'-adenylated nucleic acid breaks, however, APTX function in vertebrates remains unclear due to the lack of an appropriate model system. Here, we generated a murine model in which a pathogenic mutant of superoxide dismutase 1 (SOD1(G93A)) is expressed in an Aptx-/- mouse strain. We report a delayed population doubling and accelerated senescence in Aptx-/- primary mouse fibroblasts, which is not due to detectable telomere instability or cell cycle deregulation but is associated with a reduction in transcription recovery following oxidative stress. Expression of SOD1(G93A) uncovers a survival defect ex vivo in cultured cells and in vivo in tissues lacking Aptx. The surviving neurons feature numerous and deep nuclear envelope invaginations, a hallmark of cellular stress. Furthermore, they possess an elevated number of high-density nuclear regions and a concomitant increase in histone H3 K9 trimethylation, hallmarks of silenced chromatin. Finally, the accelerated cellular senescence was also observed at the organismal level as shown by down-regulation of insulin-like growth factor 1 (IGF-1), a hallmark of premature ageing. Together, this study demonstrates a protective role of Aptx in vivo and suggests that its loss results in progressive accumulation of DNA breaks in the nervous system, triggering hallmarks of premature ageing, systemically., (© The Author 2014. Published by Oxford University Press.)
- Published
- 2015
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40. DYNC1H1 mutation alters transport kinetics and ERK1/2-cFos signalling in a mouse model of distal spinal muscular atrophy.
- Author
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Garrett CA, Barri M, Kuta A, Soura V, Deng W, Fisher EM, Schiavo G, and Hafezparast M
- Subjects
- Animals, Brain-Derived Neurotrophic Factor metabolism, Cells, Cultured, Culture Media, Serum-Free pharmacology, Disease Models, Animal, Embryo, Mammalian, Endosomes drug effects, Endosomes metabolism, Epidermal Growth Factor metabolism, Humans, Mice, Mice, Transgenic, Motor Neurons drug effects, Motor Neurons metabolism, Phosphoprotein Phosphatases metabolism, Protein Transport drug effects, Protein Transport genetics, Transfection, Cytoplasmic Dyneins genetics, MAP Kinase Signaling System genetics, Muscular Atrophy, Spinal genetics, Mutation genetics, Proto-Oncogene Proteins c-fos metabolism
- Abstract
Mutations in the gene encoding the heavy chain subunit (DYNC1H1) of cytoplasmic dynein cause spinal muscular atrophy with lower extremity predominance, Charcot-Marie-Tooth disease and intellectual disability. We used the legs at odd angles (Loa) (DYNC1H1(F580Y)) mouse model for spinal muscular atrophy with lower extremity predominance and a combination of live-cell imaging and biochemical assays to show that the velocity of dynein-dependent microtubule minus-end (towards the nucleus) movement of EGF and BDNF induced signalling endosomes is significantly reduced in Loa embryonic fibroblasts and motor neurons. At the same time, the number of the plus-end (towards the cell periphery) moving endosomes is increased in the mutant cells. As a result, the extracellular signal-regulated kinases (ERK) 1/2 activation and c-Fos expression are altered in both mutant cell types, but the motor neurons exhibit a strikingly abnormal ERK1/2 and c-Fos response to serum-starvation induced stress. These data highlight the cell-type specific ERK1/2 response as a possible contributory factor in the neuropathological nature of Dync1h1 mutations, despite generic aberrant kinetics in both cell types, providing an explanation for how mutations in the ubiquitously expressed DYNC1H1 cause neuron-specific disease., (© The Author (2014). Published by Oxford University Press on behalf of the Guarantors of Brain. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2014
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41. PARP-1 dependent recruitment of the amyotrophic lateral sclerosis-associated protein FUS/TLS to sites of oxidative DNA damage.
- Author
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Rulten SL, Rotheray A, Green RL, Grundy GJ, Moore DA, Gómez-Herreros F, Hafezparast M, and Caldecott KW
- Subjects
- Animals, Cells, Cultured, Humans, Mice, Mutation, Oxidation-Reduction, Poly (ADP-Ribose) Polymerase-1, Poly Adenosine Diphosphate Ribose biosynthesis, Poly Adenosine Diphosphate Ribose metabolism, RNA-Binding Protein FUS genetics, Amyotrophic Lateral Sclerosis genetics, DNA Damage, Poly(ADP-ribose) Polymerases physiology, RNA-Binding Protein FUS metabolism
- Abstract
Amyotrophic lateral sclerosis (ALS) is associated with progressive degeneration of motor neurons. Several of the genes associated with this disease encode proteins involved in RNA processing, including fused-in-sarcoma/translocated-in-sarcoma (FUS/TLS). FUS is a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) family of proteins that bind thousands of pre-mRNAs and can regulate their splicing. Here, we have examined the possibility that FUS is also a component of the cellular response to DNA damage. We show that both GFP-tagged and endogenous FUS re-localize to sites of oxidative DNA damage induced by UVA laser, and that FUS recruitment is greatly reduced or ablated by an inhibitor of poly (ADP-ribose) polymerase activity. Consistent with this, we show that recombinant FUS binds directly to poly (ADP-ribose) in vitro, and that both GFP-tagged and endogenous FUS fail to accumulate at sites of UVA laser induced damage in cells lacking poly (ADP-ribose) polymerase-1. Finally, we show that GFP-FUS(R521G), harbouring a mutation that is associated with ALS, exhibits reduced ability to accumulate at sites of UVA laser-induced DNA damage. Together, these data suggest that FUS is a component of the cellular response to DNA damage, and that defects in this response may contribute to ALS.
- Published
- 2014
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42. Cytoplasmic dynein heavy chain: the servant of many masters.
- Author
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Schiavo G, Greensmith L, Hafezparast M, and Fisher EM
- Subjects
- Animals, Genetic Predisposition to Disease genetics, Humans, Mutation genetics, Protein Multimerization, Brain metabolism, Cytoplasmic Dyneins genetics, Cytoplasmic Dyneins metabolism, Neurons metabolism
- Abstract
Cytoplasmic dynein is the main retrograde motor in all eukaryotic cells. This complex comprises different subunits assembled on a cytoplasmic dynein heavy chain 1 (DYNC1H1) dimer. Cytoplasmic dynein is particularly important for neurons because it carries essential signals and organelles from distal sites to the cell body. In the past decade, several mouse models have helped to dissect the numerous functions of DYNC1H1. Additionally, several DYNC1H1 mutations have recently been found in human patients that give rise to a broad spectrum of developmental and midlife-onset disorders. Here, we discuss the effects of mutations of mouse and human DYNC1H1 and how these studies are giving us new insight into the many critical roles DYNC1H1 plays in the nervous system., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
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43. Mutations in BICD2 cause dominant congenital spinal muscular atrophy and hereditary spastic paraplegia.
- Author
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Oates EC, Rossor AM, Hafezparast M, Gonzalez M, Speziani F, MacArthur DG, Lek M, Cottenie E, Scoto M, Foley AR, Hurles M, Houlden H, Greensmith L, Auer-Grumbach M, Pieber TR, Strom TM, Schule R, Herrmann DN, Sowden JE, Acsadi G, Menezes MP, Clarke NF, Züchner S, Muntoni F, North KN, and Reilly MM
- Subjects
- Adult, Aged, Carrier Proteins metabolism, Child, Child, Preschool, Cytoplasmic Dyneins metabolism, Female, Genes, Dominant, Genetic Linkage, Genome-Wide Association Study, HEK293 Cells, Haplotypes, Humans, Male, Microtubule-Associated Proteins, Middle Aged, Muscular Atrophy, Spinal congenital, Muscular Atrophy, Spinal metabolism, Paraplegia metabolism, Pedigree, Polymorphism, Single Nucleotide, Protein Binding, Young Adult, Carrier Proteins genetics, Muscular Atrophy, Spinal genetics, Mutation, Missense, Paraplegia genetics
- Abstract
Dominant congenital spinal muscular atrophy (DCSMA) is a disorder of developing anterior horn cells and shows lower-limb predominance and clinical overlap with hereditary spastic paraplegia (HSP), a lower-limb-predominant disorder of corticospinal motor neurons. We have identified four mutations in bicaudal D homolog 2 (Drosophila) (BICD2) in six kindreds affected by DCSMA, DCSMA with upper motor neuron features, or HSP. BICD2 encodes BICD2, a key adaptor protein that interacts with the dynein-dynactin motor complex, which facilitates trafficking of cellular cargos that are critical to motor neuron development and maintenance. We demonstrate that mutations resulting in amino acid substitutions in two binding regions of BICD2 increase its binding affinity for the cytoplasmic dynein-dynactin complex, which might result in the perturbation of BICD2-dynein-dynactin-mediated trafficking, and impair neurite outgrowth. These findings provide insight into the mechanism underlying both the static and the slowly progressive clinical features and the motor neuron pathology that characterize BICD2-associated diseases, and underscore the importance of the dynein-dynactin transport pathway in the development and survival of both lower and upper motor neurons., (Copyright © 2013 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)
- Published
- 2013
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44. From the cell membrane to the nucleus: unearthing transport mechanisms for dynein.
- Author
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Crossley L, Garrett CA, Hafezparast M, and Madzvamuse A
- Subjects
- Adenosine Triphosphate metabolism, Biological Transport, Endocytosis, ErbB Receptors metabolism, Numerical Analysis, Computer-Assisted, Cell Membrane metabolism, Cell Nucleus metabolism, Cytoplasmic Dyneins metabolism, Models, Biological
- Abstract
Mutations in the motor protein cytoplasmic dynein have been found to cause Charcot-Marie-Tooth disease, spinal muscular atrophy, and severe intellectual disabilities in humans. In mouse models, neurodegeneration is observed. We sought to develop a novel model which could incorporate the effects of mutations on distance travelled and velocity. A mechanical model for the dynein mediated transport of endosomes is derived from first principles and solved numerically. The effects of variations in model parameter values are analysed to find those that have a significant impact on velocity and distance travelled. The model successfully describes the processivity of dynein and matches qualitatively the velocity profiles observed in experiments.
- Published
- 2012
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45. Binding of dynein intermediate chain 2 to paxillin controls focal adhesion dynamics and migration.
- Author
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Rosse C, Boeckeler K, Linch M, Radtke S, Frith D, Barnouin K, Morsi AS, Hafezparast M, Howell M, and Parker PJ
- Subjects
- Amino Acid Sequence, Animals, Cells, Cultured, Cytoplasmic Dyneins, Kidney cytology, Kidney enzymology, Molecular Sequence Data, Phosphorylation, Rats, Cell Adhesion physiology, Cell Movement physiology, Dyneins metabolism, Paxillin metabolism
- Abstract
In migrating NRK cells, aPKCs control the dynamics of turnover of paxillin-containing focal adhesions (FA) determining migration rate. Using a proteomic approach (two-dimensional fluorescence difference gel electrophoresis), dynein intermediate chain 2 (dynein IC2) was identified as a protein that is phosphorylated inducibly during cell migration in a PKC-regulated manner. By gene silencing and co-immunoprecipitation studies, we show that dynein IC2 regulates the speed of cell migration through its interaction with paxillin. This interaction is controlled by serine 84 phosphorylation, which lies on the aPKC pathway. The evidence presented thus links aPKC control of migration to the dynein control of FA turnover through paxillin.
- Published
- 2012
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46. A comprehensive assessment of the SOD1G93A low-copy transgenic mouse, which models human amyotrophic lateral sclerosis.
- Author
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Acevedo-Arozena A, Kalmar B, Essa S, Ricketts T, Joyce P, Kent R, Rowe C, Parker A, Gray A, Hafezparast M, Thorpe JR, Greensmith L, and Fisher EM
- Subjects
- Amyotrophic Lateral Sclerosis complications, Amyotrophic Lateral Sclerosis physiopathology, Animals, Behavior, Animal, Cell Survival, Disease Progression, Endpoint Determination, Female, Gliosis complications, Gliosis pathology, Gliosis physiopathology, Hand Strength physiology, Hindlimb pathology, Hindlimb physiopathology, Humans, Male, Mice, Mice, Inbred C57BL, Mice, Transgenic, Motor Neurons pathology, Muscles pathology, Muscles physiopathology, Protein Folding, Reflex, Startle physiology, Rotarod Performance Test, Sex Characteristics, Spinal Cord pathology, Spinal Cord physiopathology, Spinal Cord ultrastructure, Superoxide Dismutase-1, Amino Acid Substitution genetics, Amyotrophic Lateral Sclerosis pathology, Disease Models, Animal, Gene Dosage genetics, Superoxide Dismutase genetics
- Abstract
Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disorder that results in the death of motor neurons in the brain and spinal cord. The disorder generally strikes in mid-life, relentlessly leading to paralysis and death, typically 3-5 years after diagnosis. No effective treatments are available. Up to 10% of ALS is familial, usually autosomal dominant. Several causative genes are known and, of these, mutant superoxide dismutase 1 (SOD1) is by far the most frequently found, accounting for up to 20% of familial ALS. A range of human mutant SOD1 transgenic mouse strains has been produced, and these largely successfully model the human disease. Of these, the most widely used is the SOD1 mouse, which expresses a human SOD1 transgene with a causative G93A mutation. This mouse model is excellent for many purposes but carries up to 25 copies of the transgene and produces a great excess of SOD1 protein, which might affect our interpretation of disease processes. A variant of this strain carries a deletion of the transgene array such that the copy number is dropped to eight to ten mutant SOD1 genes. This 'deleted' 'low-copy' mouse undergoes a slower course of disease, over many months. Here we have carried out a comprehensive analysis of phenotype, including nerve and muscle physiology and histology, to add to our knowledge of this 'deleted' strain and give baseline data for future studies. We find differences in phenotype that arise from genetic background and sex, and we quantify the loss of nerve and muscle function over time. The slowly progressive pathology observed in this mouse strain could provide us with a more appropriate model for studying early-stage pathological processes in ALS and aid the development of therapies for early-stage treatments.
- Published
- 2011
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47. Mutations in cytoplasmic dynein lead to a Huntington's disease-like defect in energy metabolism of brown and white adipose tissues.
- Author
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Eschbach J, Fergani A, Oudart H, Robin JP, Rene F, Gonzalez de Aguilar JL, Larmet Y, Zoll J, Hafezparast M, Schwalenstocker B, Loeffler JP, Ludolph AC, and Dupuis L
- Subjects
- 3T3-L1 Cells, Adrenergic alpha-Agonists pharmacology, Animals, Blotting, Western, Cytoplasmic Dyneins metabolism, Female, Gene Expression, Humans, Huntingtin Protein, Huntington Disease genetics, Huntington Disease metabolism, Lipolysis drug effects, Lipolysis genetics, Male, Mice, Mice, Mutant Strains, Nerve Tissue Proteins genetics, Nerve Tissue Proteins metabolism, Norepinephrine pharmacology, Nuclear Proteins genetics, Nuclear Proteins metabolism, Oxidative Stress drug effects, Receptors, Adrenergic, beta-2 metabolism, Reverse Transcriptase Polymerase Chain Reaction, Signal Transduction, Thermogenesis genetics, Adipose Tissue, Brown metabolism, Adipose Tissue, White metabolism, Cytoplasmic Dyneins genetics, Energy Metabolism genetics, Mutation
- Abstract
The molecular motor dynein is regulated by the huntingtin protein, and Huntington's disease (HD) mutations of huntingtin disrupt dynein motor activity. Besides abnormalities in the central nervous system, HD animal models develop prominent peripheral pathology, with defective brown tissue thermogenesis and dysfunctional white adipocytes, but whether this peripheral phenotype is recapitulated by dynein dysfunction is unknown. Here, we observed prominently increased adiposity in mice harboring the legs at odd angles (Loa/+) or the Cramping mutations (Cra/+) in the dynein heavy chain gene. In Cra/+ mice, hyperadiposity occurred in the absence of energy imbalance and was the result of impaired norepinephrine-stimulated lipolysis. A similar phenotype was observed in 3T3L1 adipocytes upon chemical inhibition of dynein showing that loss of functional dynein leads to impairment of lipolysis. Ex vivo, dynein mutant adipose tissue displayed increased reactive oxygen species production that was, at least partially, responsible for the decreased cellular responses to norepinephrine and subsequent defect in stimulated lipolysis. Dynein mutation also affected norepinephrine efficacy to elicit a thermogenic response and led to morphological abnormalities in brown adipose tissue and cold intolerance in dynein mutant mice. Interestingly, protein levels of huntingtin were decreased in dynein mutant adipose tissue. Collectively, our results provide genetic evidence that dynein plays a key role in lipid metabolism and thermogenesis through a modulation of oxidative stress elicited by norepinephrine. This peripheral phenotype of dynein mutant mice is similar to that observed in various animal models of HD, lending further support for a functional link between huntingtin and dynein., (Copyright © 2010 Elsevier B.V. All rights reserved.)
- Published
- 2011
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48. Neurodegenerative mutation in cytoplasmic dynein alters its organization and dynein-dynactin and dynein-kinesin interactions.
- Author
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Deng W, Garrett C, Dombert B, Soura V, Banks G, Fisher EM, van der Brug MP, and Hafezparast M
- Subjects
- Animals, Cytoplasmic Dyneins genetics, Dynactin Complex, Kinesins, Mice, Mice, Mutant Strains, Microtubule-Associated Proteins genetics, Neurodegenerative Diseases genetics, Cytoplasmic Dyneins metabolism, Microtubule-Associated Proteins metabolism, Mutation, Neurodegenerative Diseases metabolism
- Abstract
A single amino acid change, F580Y (Legs at odd angles (Loa), Dync1h1(Loa)), in the highly conserved and overlapping homodimerization, intermediate chain, and light intermediate chain binding domain of the cytoplasmic dynein heavy chain can cause severe motor and sensory neuron loss in mice. The mechanism by which the Loa mutation impairs the neuron-specific functions of dynein is not understood. To elucidate the underlying molecular mechanisms of neurodegeneration arising from this mutation, we applied a cohort of biochemical methods combined with in vivo assays to systemically study the effects of the mutation on the assembly of dynein and its interaction with dynactin. We found that the Loa mutation in the heavy chain leads to increased affinity of this subunit of cytoplasmic dynein to light intermediate and a population of intermediate chains and a suppressed association of dynactin to dynein. These data suggest that the Loa mutation drives the assembly of cytoplasmic dynein toward a complex with lower affinity to dynactin and thus impairing transport of cargos that tether to the complex via dynactin. In addition, we detected up-regulation of kinesin light chain 1 (KLC1) and its increased association with dynein but reduced microtubule-associated KLC1 in the Loa samples. We provide a model describing how up-regulation of KLC1 and its interaction with cytoplasmic dynein in Loa could play a regulatory role in restoring the retrograde and anterograde transport in the Loa neurons.
- Published
- 2010
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49. Mouse cytoplasmic dynein intermediate chains: identification of new isoforms, alternative splicing and tissue distribution of transcripts.
- Author
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Kuta A, Deng W, Morsi El-Kadi A, Banks GT, Hafezparast M, Pfister KK, and Fisher EM
- Subjects
- Alternative Splicing genetics, Alternative Splicing physiology, Animals, Computational Biology, Dyneins genetics, Humans, Mice, Protein Isoforms genetics, Rats, Cytoplasm metabolism, Dyneins metabolism, Protein Isoforms metabolism
- Abstract
Background: Intracellular transport of cargoes including organelles, vesicles, signalling molecules, protein complexes, and RNAs, is essential for normal function of eukaryotic cells. The cytoplasmic dynein complex is an important motor that moves cargos along microtubule tracks within the cell. In mammals this multiprotein complex includes dynein intermediate chains 1 and 2 which are encoded by two genes, Dync1i1 and Dync1i2. These proteins are involved in dynein cargo binding and dynein complexes with different intermediate chains bind to specific cargoes, although the mechanisms to achieve this are not known. The DYNC1I1 and DYNC1I2 proteins are translated from different splice isoforms, and specific forms of each protein are essential for the function of different dynein complexes in neurons., Methodology/principal Findings: Here we have undertaken a systematic survey of the dynein intermediate chain splice isoforms in mouse, basing our study on mRNA expression patterns in a range of tissues, and on bioinformatics analysis of mouse, rat and human genomic and cDNA sequences. We found a complex pattern of alternative splicing of both dynein intermediate chain genes, with maximum complexity in the embryonic and adult nervous system. We have found novel transcripts, including some with orthologues in human and rat, and a new promoter and alternative non-coding exon 1 for Dync1i2., Conclusions/significance: These data, including the cloned isoforms will be essential for understanding the role of intermediate chains in the cytoplasmic dynein complex, particularly their role in cargo binding within individual tissues including different brain regions.
- Published
- 2010
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50. The legs at odd angles (Loa) mutation in cytoplasmic dynein ameliorates mitochondrial function in SOD1G93A mouse model for motor neuron disease.
- Author
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El-Kadi AM, Bros-Facer V, Deng W, Philpott A, Stoddart E, Banks G, Jackson GS, Fisher EM, Duchen MR, Greensmith L, Moore AL, and Hafezparast M
- Subjects
- Animals, Cytoplasm metabolism, Female, Heterozygote, Membrane Potentials, Mice, Mice, Inbred C57BL, Mice, Transgenic, Motor Neurons metabolism, Superoxide Dismutase-1, Disease Models, Animal, Dyneins genetics, Mitochondria metabolism, Motor Neuron Disease metabolism, Mutation, Superoxide Dismutase genetics
- Abstract
Amyotrophic lateral sclerosis (ALS) is a debilitating and fatal late-onset neurodegenerative disease. Familial cases of ALS (FALS) constitute approximately 10% of all ALS cases, and mutant superoxide dismutase 1 (SOD1) is found in 15-20% of FALS. SOD1 mutations confer a toxic gain of unknown function to the protein that specifically targets the motor neurons in the cortex and the spinal cord. We have previously shown that the autosomal dominant Legs at odd angles (Loa) mutation in cytoplasmic dynein heavy chain (Dync1h1) delays disease onset and extends the life span of transgenic mice harboring human mutant SOD1(G93A). In this study we provide evidence that despite the lack of direct interactions between mutant SOD1 and either mutant or wild-type cytoplasmic dynein, the Loa mutation confers significant reductions in the amount of mutant SOD1 protein in the mitochondrial matrix. Moreover, we show that the Loa mutation ameliorates defects in mitochondrial respiration and membrane potential observed in SOD1(G93A) motor neuron mitochondria. These data suggest that the Loa mutation reduces the vulnerability of mitochondria to the toxic effects of mutant SOD1, leading to improved mitochondrial function in SOD1(G93A) motor neurons.
- Published
- 2010
- Full Text
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