63 results on '"Hachuła B"'
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2. Systematic studies on the dynamics, intermolecular interactions and local structure in the alkyl and phenyl substituted butanol isomers
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Hachuła, B., Grelska, J., Soszka, N., Jurkiewicz, K., Nowok, A., Szeremeta, A.Z., Pawlus, S., Paluch, M., and Kaminski, K.
- Published
- 2022
- Full Text
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3. Is a Dissociation Process Underlying the Molecular Origin of the Debye Process in Monohydroxy Alcohols?
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Soszka, N., primary, Hachuła, B., additional, Tarnacka, M., additional, Kaminska, E., additional, Pawlus, S., additional, Kaminski, K., additional, and Paluch, M., additional
- Published
- 2021
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4. The impact of the length of alkyl chain on the behavior of benzyl alcohol homologues – the interplay between dispersive and hydrogen bond interactions
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Soszka, N., primary, Hachuła, B., additional, Tarnacka, M., additional, Kamińska, E., additional, Grelska, J., additional, Jurkiewicz, K., additional, Geppert-Rybczyńska, M., additional, Wrzalik, R., additional, Grzybowska, K., additional, Pawlus, S., additional, Paluch, M., additional, and Kamiński, K., additional
- Published
- 2021
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5. Influence of the Internal Structure and Intermolecular Interactions on the Correlation between Structural (α) and Secondary (β-JG) Relaxation below the Glass Transition Temperature in Neat Probucol and Its Binary Mixtures with Modified Saccharides
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Minecka, A., primary, Tarnacka, M., additional, Jurkiewicz, K., additional, Hachuła, B., additional, Kamiński, K., additional, Paluch, M., additional, and Kamińska, E., additional
- Published
- 2020
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6. Variation of Activation Volume as an Indicator of the Difference in Clusterization Phenomenon Induced by H-Bonding and F-Π Stacking Interactions in Enantiomers and a Racemate of Flurbiprofen.
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Jesionek P, Hachuła B, Jurkiewicz K, Włodarczyk P, Hreczka M, Kamiński K, and Kamińska E
- Abstract
In this paper, X-ray diffraction (XRD), differential scanning calorimetry (DSC), broadband dielectric (BDS), and Fourier transform infrared (FTIR) spectroscopy supported by molecular dynamics (MD) simulations and quantum chemical computations were applied to investigate the structural and thermal properties, molecular dynamics, and H-bonding pattern of R -, S -, and RS -flurbiprofen (FLP). Experimental data indicated various spatial molecular arrangements in crystalline forms of examined systems, which seemed to disappear in the liquid state. Surprisingly, deeper analysis of high-pressure dielectric data revealed unexpected variation in the activation volume of pure enantiomers and a racemate. MD simulations showed that it is an effect of the clusterization phenomenon and a higher population of small associates in the former samples. Moreover, theoretical consideration exposed the particular role of unspecific F-Π interactions as a driving force underlying local molecular arrangements of molecules in the liquid and the crystal lattice of R -, S -, and RS -FLP.
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- 2024
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7. The existence of a strongly bonded layer in associating liquids within silica pores - a spectral and molecular dynamics study.
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Soszka N, Tarnacka M, Hachuła B, Włodarczyk P, Wrzalik R, Hreczka M, Paluch M, and Kamiński K
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The properties of confined materials are assumed to be governed by the phenomena occurring at the interface, especially the formation of an irreversible adsorption layer (IAL), which has been widely discussed and detected in the case of thin polymer films and silica nanoparticles. In this paper, we present a novel experimental approach allowing us to reveal the formation of an IAL in two phenyl alcohols infiltrated into various mesoporous silica templates. The proposed methodology (based on evaporation) allowed us to detect the alterations in the OH and aromatic CH stretching vibration bands in infrared spectra, which were considered as evidence of the existence of IAL in constrained systems. Such interpretation was also confirmed by complementary molecular dynamics (MD) simulations that indicated the creation of much stronger hydrogen bonds between alcohols and silanol units than between alcohols themselves. Moreover, computation allowed us to identify additional enormously strong π-stacking interactions between phenyl rings stabilizing the interfacial layer. MD simulations also shed new light on the clustering process of both alcohols under confinement. Simulation and experimental data presented in this paper allowed a much deeper understanding of the processes occurring at the interface-formation of IAL and the association phenomenon at the nanoscale level.
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- 2024
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8. The Impact of Various Poly(vinylpyrrolidone) Polymers on the Crystallization Process of Metronidazole.
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Orszulak L, Lamrani T, Tarnacka M, Hachuła B, Jurkiewicz K, Zioła P, Mrozek-Wilczkiewicz A, Kamińska E, and Kamiński K
- Abstract
In this paper, we propose one-step synthetic strategies for obtaining well-defined linear and star-shaped polyvinylpyrrolidone ( lin PVP and star PVP). The produced macromolecules and a commercial PVP K30 with linear topology were investigated as potential matrices for suppressing metronidazole (MTZ) crystallization. Interestingly, during the formation of binary mixtures (BMs) containing different polymers and MTZ, we found that linear PVPs exhibit maximum miscibility with the drug at a 50:50 weight ratio ( w / w ), while the star-shaped polymer mixes with MTZ even at a 30:70 w / w . To explain these observations, comprehensive studies of MTZ-PVP formulations with various contents of both components were performed using Fourier-transform infrared spectroscopy, differential scanning calorimetry, and X-ray diffraction. The obtained results clearly showed that the polymer's topology plays a significant role in the type of interactions occurring between the matrix and MTZ. Additionally, we established that for MTZ-PVP 50:50 and 75:25 w / w BMs, linear polymers have the most substantial impact on inhibiting the crystallization of API. The star-shaped macromolecule turned out to be the least effective in stabilizing amorphous MTZ at these polymer concentrations. Nevertheless, long-term structural investigations of the MTZ- star PVP 30:70 w / w system (which is not achievable for linear PVPs) demonstrated its complete amorphousness for over one month.
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- 2024
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9. Pressure-Induced Aggregation of Associating Liquids as a Driving Force Enhancing Hydrogen Bond Cooperativity.
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Hachuła B, Włodarczyk P, Jurkiewicz K, Grelska J, Scelta D, Fanetti S, Paluch M, Pawlus S, and Kamiński K
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The behavior of hydrogen bonds under extreme pressure is still not well understood. Until now, the shift of the stretching vibration band of the X-H group (X = the donor atom) in infrared spectra has been attributed to the variation in the length of the covalent X-H bond. Herein, we combined infrared spectroscopy and X-ray diffraction experimental studies of two H-bonded liquid hexane derivatives, i.e., 2-ethyl-1-hexanol and 2-ethyl-1-hexylamine, in diamond anvil cells at pressures up to the GPa level, with molecular dynamics simulations covering similar thermodynamic conditions. Our findings revealed that the observed changes in the X-H stretching vibration bands under compression are not primarily due to H-bond shortening resulting from increased density but mainly due to cooperative enhancement of H-bonds caused by intensified molecular clustering. This sheds new light on the nature of H-bond interactions and the structure of liquid molecular systems under compression.
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- 2024
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10. Preconcentration of phosphate ions on graphene oxide decorated with lanthanum oxide from waters followed by energy dispersive X-ray fluorescence spectrometric determination.
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Pytlakowska K, Kocot K, Hachuła B, and Talik E
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A method for energy dispersive X-ray fluorescence spectrometric (EDXRF) determination of phosphate ions via the PKα line in diverse types of water samples is described. The method is based on ultrasonically assisted dispersive micro-solid phase extraction (USA-DMSPE) using lanthanum oxide supported on graphene oxide (La
2 O3 -GO) as a solid adsorbent. Under optimal preconcentration conditions, i.e. sample pH = 5, sample volume 50 mL, adsorbent dose 0.8 mg, sonication time 30 min, a linear response was obtained between the phosphate concentration and the measured analytical signal in the range of 2-300 ng mL-1 with a correlation coefficient of 0.9995. The developed procedure is characterized by good detection and quantification limits of 0.4 and 1.32 ng mL-1 . The inter-day and infra-day precision of the method tested at analyte ion concentrations of 5, 50, and 200 ng mL-1 ranges from 1.1 to 4.4% and 1.2-4.7%, respectively. The accuracy of the method was verified by the standard addition method and the inductively coupled plasma atomic emission spectrometry (ICP-OES) comparative technique. The method was implemented for the analysis of various water samples, including artificial seawater. The phosphate content in studied water samples ranges from 23.8 to 121 ng mL-1 . Recoveries in samples enriched with phosphates with a known concentration of 94-102%, as well as a relative difference of 1.5-3.8% between results obtained by USA-DMSPE/EDXRF and ICP-OES indicate the usefulness of the method for the quantitative determination of phosphate ions in natural waters. Moreover, the mechanism of chemisorption in the tested system was discussed and the maximum adsorption capacity of La2 O3 -GO towards phosphate ions (90.1 mg g-1 ) was determined., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)- Published
- 2024
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11. Experimental and Computational Approach to Studying Supramolecular Structures in Propanol and Its Halogen Derivatives.
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Łucak K, Szeremeta AZ, Wrzalik R, Grelska J, Jurkiewicz K, Soszka N, Hachuła B, Kramarczyk D, Grzybowska K, Yao B, Kamiński K, and Pawlus S
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A series of four alcohols, n -propanol and its halogen (Cl, Br, and I) derivatives, were selected to study the effects of variation in polarity and halogen-driven interactions on the hydrogen bonding pattern and supramolecular structure by means of experimental and theoretical methods. It was demonstrated on both grounds that the average strength of H-bonds remains the same but dissociation enthalpy, the size of molecular nanoassemblies, as well as long-range correlations between dipoles vary with the molecular weight of halogen atom. Further molecular dynamics simulations indicated that it is connected to the variation in the molecular order introduced by specific halogen-based hydrogen bonds and halogen-halogen interactions. Our results also provided important experimental evidence supporting the assumption of the transient chain model on the molecular origin of the structural process in self-assembling alcohols.
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- 2023
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12. Studies on the nature and pressure evolution of phase transitions in 1-adamantylamine and 1-adamantanol.
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Jesionek P, Hachuła B, Heczko D, Lamrani T, Jurkiewicz K, Tarnacka M, Książek M, Kamiński K, and Kamińska E
- Abstract
In this paper, several experimental techniques, i.e., differential scanning calorimetry, X-ray diffraction, Fourier transform infrared, Raman, and broadband dielectric spectroscopy were applied to study the nature of the phase transitions in 1-adamantylamine (1-NH
2 -ADM, C10 H17 N) and 1-adamantanol (1-OH-ADM, C10 H16 O). Calorimetric measurements showed one and three endothermic peaks in thermograms for the latter and the former substance, respectively. Indeed, results of spectroscopic investigations indicated that the observed thermal events in 1-NH2 -ADM correspond to transitions between various plastic crystal (PC) phases (I, II, III, IV), while the endothermic process in 1-OH-ADM can be assigned to a phase transition between the PC and the ordinary crystal (OC). Especially interesting were the outcomes of dielectric studies carried out both at ambient and high-pressure conditions, during heating and cooling cycles. They showed: i) noticeable changes in the frequency dependencies of the imaginary (ε'' ) and real (ε' ) parts of the complex dielectric permittivity that occurred around temperatures of the characteristic endothermic events detected by the calorimetry, and ii) significant fluctuations of ε'' and ε' at pressures attributed to the respective phase transitions. Moreover, the pressure coefficients of the phase transition temperatures were estimated to be approximately equal to 0.2 K/MPa for both compounds. In turn, volume variation (ΔV) at the PC (II)-PC (III) and PC (III)-PC (IV) transition temperatures for 1-NH2 -ADM was essentially different than ΔV for the PC-OC transition in 1-OH-ADM., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2023
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13. High-pressure studies in the supercooled and glassy state of the strongly associated active pharmaceutical ingredient-ticagrelor.
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Jesionek P, Heczko D, Hachuła B, Kamiński K, and Kamińska E
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- Ticagrelor, Temperature, Thermodynamics, Pharmaceutical Preparations, Molecular Dynamics Simulation
- Abstract
In this paper, the molecular dynamics at different thermodynamic conditions of hydrogen-bonded (H-bonded) active pharmaceutical ingredient-ticagrelor (TICA) have been investigated. Extensive high-pressure (HP) dielectric studies revealed surprising high sensitivity of the structural (α)-relaxation to compression. They also showed that unexpectedly the shape of the α-peak remains invariable at various temperature (T) and pressure (p) conditions at constant α-relaxation time. Further infrared measurements on the ordinary and pressure densified glasses of the examined compound indicated that the hydrogen-bonding pattern in TICA is unchanged by the applied experimental conditions. Such behavior was in contrast to that observed recently for ritonavir (where the organization of hydrogen bonds varied at high p) and explained the lack of changes in the width of α-dispersion with compression. Moreover, HP dielectric measurements performed in the glassy state of TICA revealed the high sensitivity of the slow secondary (β)-relaxation (Johari-Goldstein type) to pressure and fulfillment of the isochronal superpositioning of α- and JG-β-relaxation times. Additionally, it was found that the activation entropy for the β-process, estimated from the Eyring equation (a high positive value at 0.1 MPa) slightly increases with compression. We suggested that the reason for that are probably small conformational variations of TICA molecules at elevated p., (© 2023. The Author(s).)
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- 2023
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14. On the relationship between the Debye process in dielectric response and a dissociation-association phenomenon in phenyl alcohols.
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Czaderna-Lekka A, Tarnacka M, Wojnarowska Z, Hachuła B, Paluch M, and Kamiński K
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In this paper, we have examined a series of phenyl-substituted primary monohydroxy alcohols (phenyl alcohols, PhAs), from ethanol to hexanol by means of dielectric and Fourier transform infrared (FTIR) spectroscopies supported by the mechanical investigations. The combination of both dielectric and mechanical data allows calculation of the energy barrier, E
a , for dissociation by the Rubinstein approach developed to describe the dynamical properties of self-assembling macromolecules. It was observed that the determined activation energy remains constant, | Ea,RM | ∼ 12.9-14.2 kJ mol-1 , regardless of the molecular weight of the examined material. Surprisingly, the obtained values agree very well with Ea of the dissociation process determined from the FTIR data analysed within the van't Hoff relationship, where Ea,vH ∼ 9.13-13.64 kJ mol-1 . Thus, the observed agreement between Ea determined by both applied approaches clearly implies that in the case of the examined series of PhAs, the dielectric Debye-like process is governed by the association-dissociation phenomenon as proposed by the transient chain model.- Published
- 2023
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15. Studying the Intermolecular Interactions, Structural Dynamics, and Non-Equilibrium Kinetics of Cilnidipine Infiltrated into Alumina and Silica Pores.
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Minecka A, Tarnacka M, Soszka N, Hachuła B, Kamiński K, and Kamińska E
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- Aluminum Oxide chemistry, Spectroscopy, Fourier Transform Infrared, Silicon Dioxide chemistry, Dihydropyridines
- Abstract
In the present study, the behavior of the calcium channel blocker cilnidipine (CLN) infiltrated into silica (SiO
2 ) and anodic aluminum oxide (AAO) porous membranes characterized by a similar pore size ( d = 8 nm and d = 10 nm, respectively) as well as the bulk sample has been investigated using differential scanning calorimetry, broadband dielectric spectroscopy (BDS), and Fourier-transform infrared spectroscopy (FTIR) techniques. The obtained data suggested the existence of two sets of CLN molecules in both confined systems (core and interfacial). They also revealed the lack of substantial differences in inter- and intramolecular dynamics of nanospatially restricted samples independently of the applied porous membranes. Moreover, the annealing experiments (isothermal time-dependent measurements) performed on the confined CLN clearly indicated that the whole equilibration process under confinement is governed by structural relaxation. It was also found that the βanneal parameters obtained from BDS and FTIR data upon equilibration of both confined samples are comparable (within 10%) to each other, while the equilibration constants are significantly different. This finding strongly emphasizes that there is a close connection between the inter- and intramolecular dynamics under nanospatial restriction.- Published
- 2023
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16. A study of OH···O hydrogen bonds along various isolines in 2-ethyl-1-hexanol. Temperature or pressure - which parameter controls their behavior?
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Hachuła B, Kamińska E, Koperwas K, Wrzalik R, Jurkiewicz K, Tarnacka M, Scelta D, Fanetti S, Pawlus S, Paluch M, and Kamiński K
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- Hydrogen Bonding, Pyrrolizidine Alkaloids, Temperature, Hexanols
- Abstract
The nature of H-bonding interactions is still far from being understood despite intense experimental and theoretical studies on this subject carried out by the leading research centers. In this paper, by a combination of unique high-pressure infrared, dielectric and volumetric data, the intramolecular dynamics of hydroxyl moieties (which provides direct information about H-bonds) was studied along various isolines, i.e., isotherms, isobars, isochrones, and isochores, in a simple monohydroxy alcohol (2-ethyl-1-hexanol). This allowed us to discover that the temperature controls the intermolecular hydrogen bonds, which then affect the intramolecular dynamics of OH units. Although the role of density fluctuations gets stronger as temperature rises. We also demonstrated a clear connection between the intra- and intermolecular dynamics of the associating liquid at high pressure. The data reported herein open a new perspective to explore this important aspect of the glass transition phenomenon and understand H-bonding interactions at varying thermodynamic conditions., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 The Author(s). Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
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17. The unique role of pore wall nanostructurization in the intrachannel photo-ATRP for fine-tuning PMMA tacticity.
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Maksym P, Bernat R, Koperwas K, Wojtyniak M, Piecha J, Hachuła B, Geppert-Rybczyńska M, Brzózka A, Sulka GD, Tarnacka M, Paluch M, and Kamiński K
- Abstract
In this paper, efficient MMA photo O -ATRP protocols conducted inside nanoreactors varying in nanostructured interfaces are reported for the first time. We showed that the microstructure of recovered polymers could be easily tuned just by implementing a given type of nanochannel ( d = 10, 19-28, 35, 160 nm).
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- 2022
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18. The impact of the size of acetylated cyclodextrin on the stability of amorphous metronidazole.
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Minecka A, Tarnacka M, Jurkiewicz K, Hachuła B, Wrzalik R, Bródka A, Kamiński K, and Kamińska E
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- Calorimetry, Differential Scanning, Crystallization methods, Drug Stability, Excipients chemistry, Solubility, X-Ray Diffraction, Cyclodextrins, Metronidazole
- Abstract
Modified oligosaccharides with cyclic topology seem to be promising excipients for the preparation of Amorphous Solid Dispersions (ASDs), especially with those Active Pharmaceutical Ingredients (APIs), which have a strong crystallization tendency from the amorphous/glassy state. Herein, the usefulness of two acetylated cyclodextrins (ac-α-CD and ac-β-CD) with various molecular weights (M
w ) as stabilizers for the supercooled metronidazole (Met) has been discussed. X-ray diffraction (XRD) studies carried out on Met-acCDs mixtures (prepared in molar ratios from 1:2 to 5:1) showed that the system with ac-α-CD containing the highest amount of API (5:1 m/m) crystallizes immediately after preparation, whereas all Met-ac-β-CD ASDs remain stable. What is more, long-term XRD measurements confirmed that the Met-ac-α-CD 2:1 m/m system crystallizes after 100 days of storage in contrast to the same system containing ac-β-CD. The non-isothermal calorimetric data revealed that the activation barrier for crystallization (Ecr ) in ASDs with the oligosaccharide having a greater Mw (i.e., composed of seven acGLU molecules) is slightly higher. Finally, to explain the differences in behavior between the mixtures with both acCDs, infrared studies, DFT calculations and Molecular Dynamics simulations were performed. All methods excluded the scenario of API incorporation inside the acCDs' core. On the other hand, obtained results suggested that in comparison to ac-α-CD, the greater amount of Met molecules might be bounded on the outside surface of ac-β-CD. Therefore, this modified saccharide is a better stabilizer of the examined API., (Copyright © 2022. Published by Elsevier B.V.)- Published
- 2022
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19. The impact of H/D exchange on the thermal and structural properties as well as high-pressure relaxation dynamics of melatonin.
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Jesionek P, Hachuła B, Heczko D, Jurkiewicz K, Tarnacka M, Zubko M, Paluch M, Kamiński K, and Kamińska E
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- Deuterium, Temperature, Transition Temperature, X-Ray Diffraction, Melatonin
- Abstract
In this paper, thermal properties, atomic-scale structure, and molecular dynamics (at ambient and high pressure) of native melatonin (MLT) and its partially-deuterated derivative (MLT-d
2 ) have been investigated. Based on infrared spectroscopy, it was shown that treating MLT with D2 O causes the replacement of hydrogen atoms attached to the nitrogen by deuterium. The degree of such substitution was very high (> 99%) and the deuterated sample remained stable after exposure to the air as well as during the melting and vitrification processes. Further calorimetric studies revealed the appearance of a peculiar thermal event before the melting of crystalline MLT-d2 , which was assigned by the X-ray diffraction to a local negative thermal expansion of the unit cell. Finally, the high-pressure dielectric experiments indicated a few interesting findings, including the variation in the shape of the structural relaxation peak during compression, the difference in the pressure evolution of the glass transition temperature, and the temperature dependence of activation volume for both MLT species. The variations in these parameters manifest a different impact of the compression/densification on the dynamics of hydrogen and deuterium bonds in the native and partially-deuterated MLT, respectively., (© 2022. The Author(s).)- Published
- 2022
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20. The Effect of Various Poly ( N -vinylpyrrolidone) (PVP) Polymers on the Crystallization of Flutamide.
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Heczko D, Hachuła B, Maksym P, Kamiński K, Zięba A, Orszulak L, Paluch M, and Kamińska E
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In this study, several experimental techniques were applied to probe thermal properties, molecular dynamics, crystallization kinetics and intermolecular interactions in binary mixtures (BMs) composed of flutamide (FL) and various poly( N -vinylpyrrolidone) (PVP) polymers, including a commercial product and, importantly, samples obtained from high-pressure syntheses, which differ in microstructure (defined by the tacticity of the macromolecule) from the commercial PVP. Differential Scanning Calorimetry (DSC) studies revealed a particularly large difference between the glass transition temperature ( T
g ) of FL+PVPsynth. mixtures with 10 and 30 wt% of the excipient. In the case of the FL+PVPcomm. system, this effect was significantly lower. Such unexpected findings for the former mixtures were strictly connected to the variation of the microstructure of the polymer. Moreover, combined DSC and dielectric measurements showed that the onset of FL crystallization is significantly suppressed in the BM composed of the synthesized polymers. Further non-isothermal DSC investigations carried out on various FL+10 wt% PVP mixtures revealed a slowing down of FL crystallization in all FL-based systems (the best inhibitor of this process was PVP Mn = 190 kg/mol). Our research indicated a significant contribution of the microstructure of the polymer on the physical stability of the pharmaceutical-an issue completely overlooked in the literature.- Published
- 2022
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21. Studies on the Vitrified and Cryomilled Bosentan.
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Minecka A, Chmiel K, Jurkiewicz K, Hachuła B, Łunio R, Żakowiecki D, Hyla K, Milanowski B, Koperwas K, Kamiński K, Paluch M, and Kamińska E
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- Calorimetry, Differential Scanning, Dielectric Spectroscopy, Drug Liberation, Spectroscopy, Fourier Transform Infrared, Thermogravimetry, Vitrification, X-Ray Diffraction, Bosentan chemistry
- Abstract
In this paper, several experimental techniques [X-ray diffraction, differential scanning calorimetry (DSC), thermogravimetry, Fourier transform infrared spectroscopy, and broad-band dielectric spectroscopy] have been applied to characterize the structural and thermal properties, H-bonding pattern, and molecular dynamics of amorphous bosentan (BOS) obtained by vitrification and cryomilling of the monohydrate crystalline form of this drug. Samples prepared by these two methods were found to be similar with regard to their internal structure, H-bonding scheme, and structural (α) dynamics in the supercooled liquid state. However, based on the analysis of α-relaxation times (dielectric measurements) predicted for temperatures below the glass-transition temperature ( T
g ), as well as DSC thermograms, it was concluded that the cryoground sample is more aged (and probably more physically stable) compared to the vitrified one. Interestingly, such differences in physical properties turned out to be reflected in the lower intrinsic dissolution rate of BOS obtained by cryomilling (in the first 15 min of dissolution test) in comparison to the vitrified drug. Furthermore, we showed that cryogrinding of the crystalline BOS monohydrate leads to the formation of a nearly anhydrous amorphous sample. This finding, different from that reported by Megarry et al. [ Carbohydr. Res. 2011, 346, 1061-1064] for trehalose (TRE), was revealed on the basis of infrared and thermal measurements. Finally, two various hypotheses explaining water removal upon cryomilling have been discussed in the manuscript.- Published
- 2022
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22. How does pressure affect the molecular dynamics, intramolecular interactions, and the relationship between structural (α) and secondary (JG-β) relaxation above and below the glass transition temperature in binary mixtures of H-bonded API - probucol and acetylated saccharides?
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Minecka A, Hachuła B, Kamiński K, Paluch M, and Kamińska E
- Subjects
- Crystallization, Temperature, Transition Temperature, Molecular Dynamics Simulation, Probucol
- Abstract
In this paper, the molecular dynamics as well as inter- and intramolecular interactions in the homogenous solid dispersions (SDs) of active pharmaceutical ingredient - probucol (PRO) with acetylated glucose (acGLU), acetylated sucrose (acSUC), and sucrose acetoisobutyrate (aibSUC), prepared in 5:1 molar ratio, have been investigated using broadband dielectric (BD) and Fourier transform infrared (FTIR) spectroscopy. Importantly, high pressure dielectric measurements revealed that as for neat PRO, a breakdown of the isochronal structural (α) and JG-β exact superpositioning, due to increasing separation between both processes under compression, can also be detected in its mixtures with acetylated saccharides (acSACCHs). Furthermore, the analysis of temperature dependences of JG-β-relaxation times for PRO and PRO-acSACCH SDs at selected isobaric conditions indicated the increase in the cooperativity of the secondary process (reflected in the value of the activation entropy, ΔS
β ) at elevated pressure in all systems. The mere addition of the small amount of excipient to neat PRO (p = 0.1 MPa) resulted in a greater value of ΔSβ (it was the most noticeable in the case of aibSUC). Further FTIR studies carried out on the pressure densified glasses of PRO, and binary mixtures suggested that the observed changes in the cooperativity of the JG-β-process, as well as the failure of the exact isochronal superpositioning of α- and JG-β relaxation times, are due to varying H-bond pattern in the examined single- and two-component systems at high compression/in the presence of saccharide., (Copyright © 2021. Published by Elsevier B.V.)- Published
- 2021
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23. Impact of the Chain Length and Topology of the Acetylated Oligosaccharide on the Crystallization Tendency of Naproxen from Amorphous Binary Mixtures.
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Minecka A, Tarnacka M, Jurkiewicz K, Hachuła B, Wrzalik R, Kamiński K, Paluch M, and Kamińska E
- Subjects
- Calorimetry, Differential Scanning methods, Carbohydrates chemistry, Crystallization methods, Drug Compounding methods, Excipients chemistry, Molecular Dynamics Simulation, Molecular Weight, Phase Transition drug effects, Solubility drug effects, Spectroscopy, Fourier Transform Infrared methods, X-Ray Diffraction methods, Naproxen chemistry, Oligosaccharides chemistry
- Abstract
The impact of the chain length or dispersity of polymers in controlling the crystallization of amorphous active pharmaceutical ingredients (APIs) has been discussed for a long time. However, because of the weak control of these parameters in the majority of macromolecules used in pharmaceutical formulations, the abovementioned topic is poorly understood. Herein, four acetylated oligosaccharides, maltose (acMAL), raffinose (acRAF), stachyose (acSTA), and α-cyclodextrin (ac-α-CD) of growing chain lengths and different topologies (linear vs cyclic), mimicking the growing backbone of the polymer, were selected to probe the influence of these structural factors on the crystallization of naproxen (NAP)-an API that does not vitrify regardless of the cooling rate applied in our experiment. It was found that in equimolar systems composed of NAP and linear acetylated oligosaccharides, the progress and activation barrier for crystallization are dependent on the molecular weight of the excipient despite the fact that results of Fourier transform infrared studies indicated that there is no difference in the interaction pattern between measured samples. On the other hand, complementary dielectric, calorimetric, and X-ray diffraction data clearly demonstrated that NAP mixed with ac-α-CD (cyclic saccharide) does not tend to crystallize even in the system with a much higher content of APIs. To explain this interesting finding, we have carried out further density functional theory computations, which revealed that incorporation of NAP into the cavity of ac-α-CD is hardly possible because this state is of much higher energy (up to 80 kJ/mol) with respect to the one where the API is located outside of the saccharide torus. Hence, although at the moment, it is very difficult to explain the much stronger impact of the cyclic saccharide on the suppression of crystallization and enhanced stability of NAP with respect to the linear carbohydrates, our studies clearly showed that the chain length and the topology of the excipient play a significant role in controlling the crystallization of this API.
- Published
- 2021
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24. Correlation between Locally Ordered (Hydrogen-Bonded) Nanodomains and Puzzling Dynamics of Polymethysiloxane Derivative.
- Author
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Tarnacka M, Jurkiewicz K, Hachuła B, Wojnarowska Z, Wrzalik R, Bielas R, Talik A, Maksym P, Kaminski K, and Paluch M
- Abstract
We examined the behavior of poly(mercaptopropyl)methylsiloxane (PMMS), characterized by a polymer chain backbone of alternate silicon and oxygen atoms substituted by a polar pendant group able to form hydrogen bonds (-SH moiety), by means of infrared (FTIR) and dielectric (BDS) spectroscopy, differential scanning calorimetry (DSC), X-ray diffraction (XRD), and rheology. We observed that the examined PMMS forms relatively efficient hydrogen bonds leading to the association of chains in the form of ordered lamellar-like hydrogen-bonded nanodomains. Moreover, the recorded mechanical and dielectric spectra revealed the presence of two relaxation processes. A direct comparison of collected data and relaxation times extracted from two experimental techniques, BDS and rheology, indicates that they monitor different types of the mobility of PMMS macromolecules. Our mechanical measurements revealed the presence of Rouse modes connected to the chain dynamics (slow process) and segmental relaxation (a faster process), whereas in the dielectric loss spectra we observed two relaxation processes related most likely to either the association-dissociation phenomenon within lamellar-like self-assemblies or the sub-Rouse mode (α'-slower process) and segmental (α-faster process) dynamics. Data presented herein allow a better understanding of the peculiar dynamical properties of polysiloxanes and associating polymers having strongly polar pendant moieties., Competing Interests: The authors declare no competing financial interest., (© 2020 American Chemical Society.)
- Published
- 2020
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25. Are hydrogen supramolecular structures being suppressed upon nanoscale confinement? The case of monohydroxy alcohols.
- Author
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Talik A, Tarnacka M, Geppert-Rybczyńska M, Hachuła B, Bernat R, Chrzanowska A, Kaminski K, and Paluch M
- Abstract
In this paper, the molecular dynamics, H-bonding pattern and wettability of the primary and secondary monohydroxyalcohols, 2-ethyl-1-hexanol (2E1H), 2-ethyl-1-butanol (2E1B) and 5-methyl-3-heptanol (5M3H) infiltrated into native and functionalized silica and alumina pores having pore diameters, d = 4 nm and d = 10 nm, have been studied with the use of Broadband Dielectric (BDS) and Fourier Transform InfraRed (FTIR) spectroscopies, as well as contact angle measurements. We found significant differences in the behavior of alcohols forming chain- (2E1H, 2E1B) or micelle-like (5M3H) supramolecular structures despite of their similarities in the wettability and interfacial energy. It turned out that nanoassociates as well as H-bonds are more or less affected by the confinement dependently on the chemical structure and alcohol order. Moreover, a peculiar behavior of the self-assemblies at the interface was noted in the latter material (5M3H). Finally, it was found that irrespectively to the sample, type of pores, functionalization, the temperature evolution of Debye relaxation times, τ
D , of the confined systems deviates from the bulk behavior always at similar τD due to vitrification of the interfacial layer. This finding is a clear indication that unexpectedly dynamics (mobility) of the supramolecular structures close to the hydrophilic and hydrophobic surfaces is similar in each system., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Inc. All rights reserved.)- Published
- 2020
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26. Unique Behavior of Poly(propylene glycols) Confined within Alumina Templates Having a Nanostructured Interface.
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Tarnacka M, Wojtyniak M, Brzózka A, Talik A, Hachuła B, Kamińska E, Sulka GD, Kaminski K, and Paluch M
- Abstract
Herein we show that the nanostructured interface obtained via modulation of the pore size has a strong impact on the segmental and chain dynamics of two poly(propylene glycol) (PPG) derivatives with various molecular weights ( M
n = 4000 g/mol and Mn = 2000 g/mol). In fact, a significant acceleration of the dynamics was observed for PPG infiltrated into ordinary alumina templates ( Dp = 36 nm), while bulklike behavior was found for samples incorporated into membranes of modulated diameter (19 nm < Dp < 28 nm). We demostrated that the modulation-induced roughness reduces surface interactions of polymer chains near the interface with respect to the ones adsorbed to the ordinary nanochannels. Interestingly, this effect is noted despite the enhanced wettability of PPG in the latter system. Consequently, as a result of weaker H-bonding surface interactions, the conformation of segments seems to locally mimic the bulk arrangement, leading to bulklike dynamics, highlighting the crucial impact of the interface on the overall behavior of confined materials.- Published
- 2020
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27. Influence of Annealing in the Close Vicinity of T g on the Reorganization within Dimers and Its Impact on the Crystallization Kinetics of Gemfibrozil.
- Author
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Kamińska E, Minecka A, Tarnacka M, Hachuła B, Kamiński K, and Paluch M
- Subjects
- Absorption, Physicochemical, Calorimetry, Differential Scanning, Crystallization methods, Dielectric Spectroscopy methods, HIV Protease Inhibitors chemistry, Hydrogen Bonding, Kinetics, Molecular Dynamics Simulation, Phase Transition, Ritonavir chemistry, Spectroscopy, Fourier Transform Infrared methods, Dimerization, Gemfibrozil analogs & derivatives, Gemfibrozil chemistry, Glass chemistry, Hypolipidemic Agents chemistry, Transition Temperature
- Abstract
In this paper, broadband dielectric spectroscopy (BDS) has been applied to study the molecular dynamics and crystallization kinetics of the antihyperlipidemic active pharmaceutical ingredient (API), gemfibrozil (GEM), as well as its deuterated (dGEM) and methylated (metGEM) derivatives, characterized by different types and strengths of intermolecular interactions. Moreover, calorimetric and infrared measurements have been carried out to characterize the thermal properties of examined samples and to probe a change in the H-bonding pattern in GEM, respectively. We found that the dielectric spectra of all examined compounds, collected below the glass transition temperature ( T
g ), reveal the presence of two secondary relaxations (β, γ). According to the coupling model (CM) predictions, it was assumed that the slower process (β) is of JG type, whereas the faster one (γ) has an intramolecular origin. Interestingly, the extensive crystallization kinetics measurements performed after applying two paths, i.e., the standard procedure (cooling and subsequently heating up to the appropriate temperature, Tc ), as well as annealing at two temperatures in the vicinity of Tg and further heating up to Tc , showed that the annealing increases the crystallization rate in the case of native API, while the thermal history of the sample has no significant impact on the pace of this process in the two derivatives of GEM. Analysis of the dielectric strength (Δε) of the α-process during annealing, together with the results of Fourier transform infrared spectroscopy (FTIR) measurements, suggested that the reorganization within dimeric structures formed between the GEM molecules is responsible for the observed behavior. Importantly, our results differ from those obtained by Tominaka et al. (Tominaka, S.; Kawakami, K.; Fukushima, M.; Miyazaki, A.Physical Stabilization of Pharmaceutical Glasses Based on Hydrogen Bond Reorganization under Sub-Tg Temperature Mol. Pharm. 2017 14 264 273 10.1021/acs.molpharmaceut.6b00866.), who demonstrated that the sub- Tg annealing of ritonavir (RTV), which is able to form extensive supramolecular hydrogen bonds, protects this active substance against crystallization. Therefore, based on these contradictory reports, one can hypothesize that materials forming H-bonded structures, characterized by varying architecture, may behave differently after annealing in the vicinity of the glass transition temperature.- Published
- 2020
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28. Spectroscopic and structural investigations of blue afwillite from Ma'ale Adummim locality, Palestinian Autonomy.
- Author
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Juroszek R, Czaja M, Lisiecki R, Krüger B, Hachuła B, and Galuskina I
- Abstract
Until now, only the colourless crystals of mineral afwillite, Ca
3 (HSiO4 )2 ·2H2 O, were known from several localities around the world. Present work focuses on blue afwillite counterparts from the Ma'ale Adummim locality in Palestine. Using the wide spectrum of analytical methods we attempted to identify the causes of this unusual colour. Structural investigation confirms the presence of two tetrahedral SiO3 OH units connected by hydrogen bonds. The Raman spectrum of afwillite, obtained for the first time, shows the increased number of bands in the range of 785-970 cm-1 , whose assignation was correlated with the presence of two different kinds of structural units: (SiO3 OH)3- and its deprotonated counterpart (SiO4 )4- . The heating process at 250 °C, in addition to the colour changes from blue to pastel green, shows the intensity reduction and disappearing of some Raman bands attributed mainly to SiO3 OH units. The IR investigation confirms also the presence of that unit and provides information that the position and designation of infrared bands above ∼2300 cm-1 is related to the strength of hydrogen bonds within the structure. The stretching and bending OH vibrations of afwillite sample show the partial shift to the lower spectral frequencies after the H/D isotopic exchange in OH or H2 O groups. Based on the results of the electron absorption and luminescence analyses it has been proposed that the blue colour of afwillite is caused by hole oxygen defect, most probably SiO3 - ., (Copyright © 2019 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2020
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29. Studies on the internal medium-range ordering and high pressure dynamics in modified ibuprofens.
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Minecka A, Kamińska E, Jurkiewicz K, Heczko D, Hachuła B, Pisarski W, Kamiński K, and Paluch M
- Subjects
- Ibuprofen analogs & derivatives, Molecular Dynamics Simulation, Molecular Structure, Transition Temperature, Ibuprofen chemistry
- Abstract
Broadband dielectric spectroscopy (BDS), combined with the X-ray diffraction (XRD) and Fourier transform infrared (FTIR) techniques, was used to study the dynamics of the primary (α) relaxation process and slow mode (SM), as well as structural properties and intermolecular interactions, in the methyl-, isopropyl-, hexyl-, and benzyl derivative of a well-known pharmaceutical, ibuprofen (IBU). Unexpectedly, the XRD and FTIR methods revealed the formation of medium-range ordering together with some molecular organization, which probably leads to the creation of small aggregates at the scale of several microns at lower temperatures. Moreover, high pressure dielectric experiments revealed that the SM (observed in the ambient pressure data) is not detected in the loss spectra of compressed IBU esters, which is consistent with the results reported previously for propylene carbonate and dioxolane derivatives. This finding can be interpreted as connected to either the comparable time scale of the structural dynamics and slow mode or suppression of the motions responsible for the latter process at elevated pressure. Additionally, it was found that the pressure coefficient of the glass transition temperature (dTg/dp) and activation volume (ΔV) change with molecular weight (Mw) in a non-monotonic way. It might be related to various chemical structures, conformations, and intermolecular interactions, as well as different architecture of supramolecular aggregates in the investigated compounds.
- Published
- 2019
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30. Studying structural and local dynamics in model H-bonded active ingredient - Curcumin in the supercooled and glassy states at various thermodynamic conditions.
- Author
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Minecka A, Kamińska E, Heczko D, Jurkiewicz K, Wolnica K, Dulski M, Hachuła B, Pisarski W, Tarnacka M, Talik A, Kamiński K, and Paluch M
- Subjects
- Hydrogen Bonding, Molecular Structure, Phase Transition, Pressure, Thermodynamics, Transition Temperature, Curcumin chemistry
- Abstract
Different experimental techniques were applied to study thermal and structural properties, strength of H-bonds, possible keto-enol tautomerism and molecular dynamics at various thermodynamic conditions in the H-bonded active substance, curcumin (CRM). Dielectric measurements revealed dynamical features of examined compound that are uncharacteristic for the associated systems. This includes enormously large pressure coefficient of the glass transition temperature and prominent drop of the fragility with compression. Simultaneously, the shape of α-process slightly broadened at elevated pressures. Infrared investigations demonstrated that this effect is related to the variation in the population of H-bonds. Moreover, we studied the changes in the structural and dynamical properties of the glasses prepared upon cooling of the melt (ordinary glass, OG) and the one obtained after compression of CRM in the liquid phase and decompression at T = 293 K (dense glass, DG). Interestingly, during the aging of the latter sample, a clear shift of the β-relaxation towards higher frequencies was noted. This unexpected result indicated that the density of DG is probably getting smaller with time. Complementary X-ray diffraction experiments confirmed this supposition. Additionally, they showed that in DG there are traces of polymorph II of CRM that has a higher density than initial crystals (polymorph I). Finally, infrared studies demonstrated that H-bond pattern in DG is slightly different with respect to OG. Furthermore, Raman investigations suggested that probably keto-enol tautomerism might be shifted towards diketo form in the glass obtained at high compression. Our investigations are very interesting in the context of better understanding of the behavior of associated systems at high compression as well as provide a better insight into dynamics of higher density glasses produced at elevated pressures., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
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31. The nature of hydrogen-bonding interactions in nonsteroidal anti-inflammatory drugs revealed by polarized IR spectroscopy.
- Author
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Hachuła B
- Subjects
- Crystallography, X-Ray, Deuterium chemistry, Flurbiprofen chemistry, Hydrogen Bonding, Ketoprofen chemistry, Naproxen chemistry, Spectrophotometry, Infrared, Vibration, Anti-Inflammatory Agents, Non-Steroidal chemistry
- Abstract
The influence of hydrogen-bonding interactions in the solid phase on the IR spectroscopic pattern of the ν
OH band of nonsteroidal anti-inflammatory drugs (NSAIDs) was studied experimentally by IR spectroscopy with the use of polarized light at two temperatures (293K and 77K) and in isotopic dilution. The neat and deuterated crystals of (S)-naproxen ((S)-NPX), (R)-flurbiprofen ((R)-FBP), (RS)-flurbiprofen ((RS)-FBP) and (RS)-ketoprofen ((RS)-KTP) were obtained by melt crystallization between the two squeezed CaF2 plates. The vibrational spectra of selected α-aryl propionic acid derivatives (2APAs) reflected the characteristics of their hydrogen-bond networks, i.e., 2APAs were characterized by the chain ((S)-NPX, (R)-FBP) and by dimeric ((RS)-FBP, (RS)-KTP) arrangement of hydrogen bonds in the crystal lattice. Spectroscopic results showed that the interchain (through-space) exciton coupling, between two laterally-spaced hydrogen bonds, dominates in the crystals of four NSAIDs. The same exciton coupled hydrogen bonds were also responsible for the H/D isotopic recognition mechanism in the crystalline spectra of deuterated 2APAs. The presented spectral results may help to predict the hydrogen bond motifs in the crystalline NSAIDs, which structures are not yet known, based on their IR spectra of hydrogen bond in the crystals., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2018
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32. Spectroscopic and thermal studies on 2- and 4-phenyl-1H-imidazoles.
- Author
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Hachuła B, Polasz A, Książek M, Kusz J, Starczewska O, and Pisarski W
- Abstract
The polarized IR spectra of isotopically neat and isotopically substituted monocrystalline samples of 2-phenyl-1H-imidazole (2PI) and 4-phenyl-1H-imidazole (4PI) were recorded at two temperatures of 293 K and 77 K. The room-temperature ATR-FTIR and Raman spectra of 2PI and two polymorphic forms of 4PI were also recorded. Theoretical analysis of the vibrational spectra of selected imidazole derivatives reflected similar characteristics of their hydrogen-bond networks and allowed us to obtain the information about the mechanism of the H/D isotopic "self-organization" phenomenon. The distribution of protons and deuterons in the lattices of the isotopically diluted crystalline samples of 2PI and 4PI was found to be non-random. In the crystals of the hydrogen- and deuterium-bonded imidazole derivatives the strongest vibrational exciton interactions favored the intrachain ("tail-to-head")-type exciton coupling widespread at 77 K via the π-electrons. At room temperature a weak interchain ("through-space")-type exciton coupling was also partially responsible for the IR spectra generation. Differential scanning calorimetry (DSC) measurements showed that the two polymorphic forms of 4PI exhibit an extensive supercooling of crystallization process and cold crystallization on reheating. Additionally, both polymorphic modifications of 4PI are monotropically related. 2PI exhibits only the crystallization and melting processes., (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Published
- 2017
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33. "Long-distance" H/D isotopic self-organization phenomena in scope of the infrared spectra of hydrogen-bonded terephthalic and phthalic acid crystals.
- Author
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Flakus HT, Hachuła B, Hołaj-Krzak JT, Al-Agel FA, and Rekik N
- Abstract
This paper deals with the experimental and theoretical studies of abnormal properties of terephthalic acid (TAC) and phthalic acid (PAC) crystals manifested in the H/D isotopic exchange. The widely utilized deuteration routine appeared to be insufficiently effective in the case of the h
6 -TAC isotopomer. In the case of the d4 -TAC derivative the isotopic exchange process occurred noticeably more effectively. In contrast, both isotopomers of PAC, h6 and d4 , appeared much more susceptible for deuteration. A theoretical model was elaborated describing "long-distance" dynamical co-operative interactions involving hydrogen bonds in TAC and PAC crystals. The model assumes extremely strong dynamical co-operative interactions of hydrogen bonds from the adjacent (COOH)2 cycles. This leads to an additional stabilization of h6 -TAC molecular chains. The interaction energies affect the chemical equilibrium of the H/D isotopic exchange. The model predicts a differentiated influence of the H and D atoms linked to the aromatic rings on to the process. In this approach the totally-symmetric CH bond stretching vibrations and the proton stretching totally symmetric vibrations couple with the π-electronic motions. It was also shown that identical hydrogen isotope atoms, H or D, in whole TAC molecules, noticeably enlarge the energy of the dynamical co-operative interactions in the crystals, in contrast to the case of different hydrogen isotopes present in the carboxyl groups and linked to the aromatic rings. The "long-distance" dynamical co-operative interactions in PAC crystals were found of a minor importance due to the electronic properties of PAC molecules., (Copyright © 2016 Elsevier B.V. All rights reserved.)- Published
- 2017
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34. Long-distance inter-hydrogen bond coupling effects in the polarized IR spectra of succinic acid crystals.
- Author
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Flakus HT, Hachuła B, and Hołaj-Krzak JT
- Subjects
- Crystallization, Hydrogen Bonding, Models, Molecular, Spectrophotometry, Infrared methods, Temperature, Succinic Acid chemistry
- Abstract
The spectral properties of four different crystalline succinic acid (HOOC-(CH2)2-COOH) (SAC) isotopomer systems, h6, d2, d4 and d6, were examined by means of the IR spectroscopy in polarized light aided by numerical simulations of the νO-H and νO-D band contour shapes on utilizing the "strong-coupling" model. The abnormal IR spectral properties of SAC crystals in relation to the corresponding properties of glutaric, pimelic and adipic acid crystals were ascribed to the hyperconjugation electronic effects in the acid associated molecules. A vibronic coupling mechanism involving the proton stretching vibrations in the (COOH)2 cycles and the electronic motions in the molecular skeletons, the isotopic "H/D self-organization" mechanisms and a long-distance vibrational exciton coupling between the adjacent (COOH)2 cycles in the molecular chains are mainly responsible for the generation of the temperature effects in the crystalline IR spectra., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
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35. H/D isotopic recognition and temperature effects in IR spectra of hydrogen-bonded cyclic dimers in crystals: 3-methylcinnamic acid and 4-phenylbutyric acid.
- Author
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Hachuła B, Jabłońska-Czapla M, Flakus HT, Nowak M, and Kusz J
- Subjects
- Crystallization, Dimerization, Hydrogen Bonding, Spectrophotometry, Infrared, Methacrylates chemistry, Phenylbutyrates chemistry, Phenylpropionates chemistry
- Abstract
In the present work, the experimental and theoretical study of the nature of the inter-hydrogen bond interactions in two different carboxylic acids, 3-methylcinnamic acid (3MCA) and 4-phenylbutyric acid (4PBA), were reported. The polarized IR spectra of 3MCA and 4PBA crystals were recorded at the frequency ranges of the νO-H and νO-D bands. The spectral properties of 3MCA and 4PBA interpreted with the aid of the calculations based on the "strong-coupling" model. The differences in the spectral properties of the two different dimeric systems in the crystals provide a valuable information about the existence of a direct relationship between the crystal spectral properties in IR and the electronic structure of the molecular systems. In 3MCA crystals strong vibrational exciton interactions favor a "tail-to-head" (TH)-type Davydov coupling widespread via the π-electrons, whereas in 4PBA crystals a weak "through-space" (SS) exciton coupling is responsible for a "side-to-side"-type coupling. The relative contribution of each individual exciton coupling mechanism in IR spectra generation strongly depends on temperature and molecular electronic structure. The H/D isotopic recognition effect, depending on a non-random distribution of protons and deuterons in the crystal hydrogen bridges, was also analyzed., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2015
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36. Inter-hydrogen bond coupling in crystals with molecular chains in their lattices investigated by polarized IR spectroscopy: 4-Bromo-3,5-dimethylpyrazole and 3,4-dimethoxyphenylacetic acid.
- Author
-
Hachuła B, Flakus HT, and Polasz A
- Subjects
- Crystallization, Deuterium chemistry, Halogenation, Hydrogen Bonding, Models, Molecular, Spectrophotometry, Infrared methods, Temperature, Phenylacetates chemistry, Pyrazoles chemistry
- Abstract
We report the results of the experimental and theoretical studies of the polarized IR crystalline spectra of 4-bromo-3,5-dimethylpyrazole (4Br35DMPz) and 3,4-dimethoxyphenylacetic acid (34DMPAA) as well as the spectra of their deuterium-bonded analogues. The results of model calculations of the temperature impact exerted on to the band shapes measured in the X-H- and X-D bond stretching vibration regions, performed on the basis of the "strong-coupling" model, are also shown. These studies confirm a direct relationship between the spectral properties in IR and the electronic structure of the associating molecules in the crystals. Two different competing exciton coupling mechanisms involving hydrogen bonds, the "tail-to-head" (TH) in 4Br35DMPz and the "side-to-side" coupling in 34DMPAA, were recognized. The molecular electronic structure determines the relative contribution of each individual vibrational exciton coupling mechanism in the spectra generation. It also strongly influences the temperature-induced evolution of the Davydov-splitting effects in the crystalline spectra. Dynamical co-operative interactions responsible for a non-random distribution of protons and deuterons in the crystal hydrogen bonds can also be identified in the investigated systems., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2014
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37. Inter-hydrogen bond coupling in crystals of 3-phenylpyrazole polymorphs investigated by polarized IR spectroscopy.
- Author
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Hachuła B, Flakus HT, Garbacz A, and Stolarczyk A
- Subjects
- Crystallization, Hydrogen Bonding, Models, Molecular, Spectrophotometry, Infrared methods, Hydrogen chemistry, Pyrazoles chemistry
- Abstract
The remarkably strong differences in the fine structure patterns of the νN-H and νN-D bands, temperature and H/D isotopic effects in crystals of two 3-phenylpyrazole (3PhPz) polymorphs, with tetrameric and hexameric hydrogen bond aggregates, were examined by polarized IR spectroscopy, aided by the calculations utilizing the "strong-coupling" model. Experimental and theoretical approaches have suggested that the anti-co-operativity of hydrogen bonds is the main factor responsible for the differences in the spectral properties of both polymorphs. This interaction affects hydrogen-bond geometry of the associates constituting the lattices and in consequence decides about the relative contribution of two different exciton coupling mechanism, "through-space" (SS) and "tail-to-head" (TH), in the spectra generation. The relative contribution of each individual exciton coupling mechanism in the spectra generation is temperature-dependent. In tetramers the TH coupling mechanism dominates at low temperatures, whereas the role of the SS mechanism increases at higher temperatures. For the hexamers the SS mechanism dominates in the wide temperature range. The two types of 3PhPz associates exhibit two different ways of occurring of the H/D isotopic recognition in the crystal hydrogen bonds. In the tetrameric polymorph identical hydrogen isotope atoms exist in entire hydrogen-bonded cycle of 3PhPz. In the case of 3PhPz hexamers, the H/D isotopic recognition mechanism involves pairs of the closely-spaced hydrogen bonds in a cycle., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2014
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38. Temperature, H/D isotopic and Davydov-splitting effects in the polarized IR spectra of hydrogen bond chain systems: 1,2,4-Triazole and 3-methyl-2-oxindole crystals.
- Author
-
Hachuła B, Flakus HT, and Polasz A
- Subjects
- Crystallization, Hydrogen Bonding, Models, Molecular, Oxindoles, Spectrophotometry, Infrared, Temperature, Indoles chemistry, Triazoles chemistry
- Abstract
The spectral properties of two different hydrogen-bonded crystalline systems, 1,2,4-triazole and 3-methyl-2-oxindole, containing molecular chains in their lattices, were examined by polarized IR spectroscopy, aided by the calculations utilizing the "strong-coupling" model. The experimental and theoretical approaches have shown that the individual crystal spectral properties in IR remain in a close relation with the electronic structure of the individual molecular systems. A vibronic coupling mechanism involving the hydrogen bond protons and the electrons occupying the π-electronic orbitals in the molecules determines the way in which the vibrational exciton coupling between the hydrogen bonds in the crystals occurs. For the associating systems, which molecules contain large delocalized π-electronic systems coupled directly with H-bonds, strong exciton interactions involving the vibrationally excited hydrogen bonds in the chains prefer a "tail-to-head"-type Davydov-coupling widespread via the π-electrons. A weak through-space exciton coupling involves two closely-spaced hydrogen bonds belonging to two different adjacent chains in the case, when large π-electronic systems in the molecules are absent. The relative contribution of each exciton coupling mechanism in the chain system spectra generation is temperature-dependent. The two competing individual Davydov-coupling mechanism are responsible for the appearance in the polarized spectra of temperature-dependent Davydov-splitting effects differentiating the spectral properties of the two crystalline systems. The H/D isotopic ''self-organization'' phenomenon, depending on a non-random distribution of protons and deuterons in the crystal hydrogen bridges was also analyzed., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
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39. anti-Ethyl aceto-hydroximate.
- Author
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Hachuła B, Polasz A, Nowak M, and Kusz J
- Abstract
In the crystal structure of the title compound, C4H9NO2, the O-H⋯N hydrogen bonds link the mol-ecules into supra-molecular chains extending along the b-axis direction. The conformation of the NOH group in the nearly planar (r.m.s. deviation = 0.0546 Å) ethyl aceto-hydroximate mol-ecule is trans to N=C.
- Published
- 2013
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40. Levulinic Acid.
- Author
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Hachuła B, Polasz A, Dzida M, Nowak M, and Kusz J
- Abstract
The Title Compound (systematic Name: 4-oxo-penta-noic acid), C5H8O3, is close to planar (r.m.s. deviation = 0.0762 Å). In the crystal, the mol-ecules inter-act via O-H⋯O hydrogen bonds in which the hy-droxy O atoms act as donors and the ketone O atoms in adjacent mol-ecules as acceptors, forming C(7) chains along [20-1].
- Published
- 2013
- Full Text
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41. H/D isotopic and temperature effects in the polarized IR spectra of hydrogen-bond cyclic trimers in the crystal lattices of acetone oxime and 3,5-dimethylpyrazole.
- Author
-
Flakus HT, Hachuła B, and Garbacz A
- Abstract
Polarized IR spectra of hydrogen-bonded acetone oxime and 3,5-dimethylpyrazole crystals were measured at 293 and 77 K in the ν(X-H) and ν(X-D) band frequency ranges. These crystals contain molecular trimers in their lattices. The individual crystal spectral properties remain in a close relation with the electronic structure of the two different molecular systems. We show that a vibronic coupling mechanism involving the hydrogen-bond protons and the electrons on the π-electronic systems in the molecules determines the way in which the vibrational exciton coupling between the hydrogen bonds in the trimers occurs. A strong coupling in 3,5-dimethylpyrazole trimers prefers a "tail-to-head"-type Davydov coupling widespread via the π-electrons. A weak through-space exciton coupling in acetone oxime trimers involves three adjacent hydrogen bonds in each cycle. The relative contribution of each exciton coupling mechanism in the trimer spectra generation is temperature and the molecular electronic structure-dependent. This explains the observed difference in the temperature-induced evolution of the compared spectra. The mechanism of the H/D isotopic "self-organization" processes in the crystal hydrogen bonds was also analyzed. The two types of the hydrogen-bond trimers exhibit the same way, in which the H/D isotopic recognition mechanism occurs. In acetone oxime and 3,5-dimethylpyrazole trimers, identical hydrogen isotope atoms exist in these entire hydrogen-bond systems.
- Published
- 2012
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42. H/D isotopic recognition mechanism in hydrogen-bonded crystals of 3-methylacetanilide and 4-methylacetanilide.
- Author
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Flakus HT, Smiszek-Lindert W, Hachuła B, and Michta A
- Subjects
- Crystallization, Hydrogen Bonding, Spectrophotometry, Infrared, Acetanilides chemistry, Deuterium chemistry, Protons
- Abstract
Polarized IR spectra of 3- and 4-methylacetanilide as well as their deuterium derivative crystals were measured at 293K and at 77K by a transmission method. The obtained results were interpreted within the limits of the "strong-coupling" theory. This approach facilitated the understanding of the H/D isotopic, temperature and dichroic effects observed in the hydrogen bond IR spectra. The existence of H/D isotopic "self-organization" phenomenon, depending on the non-random distribution of protons and deuterons in the crystal lattices of isotopically diluted samples of a compound was ascertained. This effect resulted from the dynamical co-operative interactions involving the closely spaced hydrogen bonds, each belonging to a different chain of associated 3- and 4-methylacetanilide molecules. In the case of 4-methylacetanilide crystals weaker but non-negligible exciton coupling also involved adjacent hydrogen bonds in each molecular chain and the H/D isotopic "self-organization" mechanism concerned at least four hydrogen bonds from each unit cell. The source of these phenomena was ascribed to the molecular electronic properties determined by aromatic rings linked to nitrogen atoms of the amide fragments., (Copyright © 2012 Elsevier B.V. All rights reserved.)
- Published
- 2012
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43. Temperature and H/D isotopic "self-organization" effects in the IR spectra of the hydrogen bond tetramer systems in 3,5-diphenylpyrazole and 4-methyl-1,2,4-triazolethione crystals.
- Author
-
Flakus HT, Hachuła B, and Majchrowska A
- Abstract
Polarized IR spectra of hydrogen-bonded 3,5-diphenylpyrazole and of 4-methyl-1,2,4-triazolethione crystals were measured at 293 and 77 K in the νN-H and νN-D band frequency ranges. These crystals contain molecular tetramers in their lattices. The individual crystal spectral properties remain in close relation with the electronic structure of the two different molecular systems. We show that a vibronic coupling mechanism involving the hydrogen bond protons and the electrons on the π-electronic systems in the molecules determines the way in which the vibrational exciton coupling between the hydrogen bonds in the tetramers occurs. A strong coupling in 3,5-diphenylpyrazole tetramers prefers a "tail-to-head"-type Davydov coupling widespread via the π-electrons. A weak through-space exciton coupling in 4-methyl-1,2,4-triazolethione tetramers involves two opposite hydrogen bonds in the cycles. The relative contributions of each exciton coupling mechanism in the tetramer spectra generation are temperature and the molecular electronic structure dependence. This explains the observed difference in the temperature-induced evolution of the compared spectra. The mechanism of the H/D isotopic ''self-organization'' processes in the crystal hydrogen bonds was also analyzed. The two types of hydrogen bond tetramers differ by the way in which the processes occur. In 3,5-diphenylpyrazole tetramers, identical hydrogen isotope atoms exist in the entire hydrogen bond system, whereas in the case of 4-methyl-1,2,4-triazolethione crystals, the H/D isotopic self-organization mechanism involves the opposite hydrogen bonds in a tetramer.
- Published
- 2012
- Full Text
- View/download PDF
44. H/D isotopic recognition in hydrogen bonded systems: H/D isotopic self-organization effects in the IR spectra of the hydrogen bond in 2-methylimidazole crystals.
- Author
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Flakus HT, Hachuła B, and Stolarczyk A
- Subjects
- Crystallization, Deuterium chemistry, Hydrogen Bonding, Spectrophotometry, Infrared methods, Imidazoles chemistry
- Abstract
Polarized IR spectra of H12(3)45 2-methylimidazole and of its H1D2(3)45, D1H2(3)45 and D12(3)45 deuterium derivative crystals are reported and interpreted within the limits of the "strong-coupling" theory. The spectra interpretation facilitated the recognition of the H/D isotopic "self-organization" phenomenon, which depends on a non-random distribution of protons and deuterons in the lattices of isotopically diluted crystal samples. The H/D isotopic "self-organization" mechanism engaged all four hydrogen bonds from each unit cell. These effects basically resulted from the dynamical co-operative interactions involving adjacent hydrogen bonds in each hydrogen bond chain. A weaker exciton coupling involved the closely spaced hydrogen bonds; each belonging to a different chain of associated 2-methylimidazole molecules. The high intensity of the narrow band at ca. 1880cm(-1) was interpreted as the result of coupling between the γ(N-H⋯N) proton bending "out of plane" vibration overtone and the ν(N-H) proton stretching vibration., (Copyright © 2011 Elsevier B.V. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
45. Polarized IR spectra of the hydrogen bond in two different oxindole polymorphs with cyclic dimers in their lattices.
- Author
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Flakus HT and Hachuła B
- Subjects
- Crystallization, Dimerization, Oxindoles, Phase Transition, Spectrophotometry, Infrared methods, Hydrogen Bonding, Indoles chemistry
- Abstract
This article focuses on the problem of remarkably strong changes in the fine structure patterns of the ν(N-H) and ν(N-D) bands attributed to the hydrogen and deuterium bonds accompanying the phase transition, which occurs between two polymorphic forms of oxindole. The lattices of these two different crystals contain hydrogen-bonded cyclic dimers differ in their geometry parameters. The source of these differences in the polymorph spectral properties results from the geometry relations concerning the dimers constituting the lattice structural units. In the case of the "alpha" phase, the hydrogen bond lengths of the dimers differ by 0.18 Å. This leads to the "off-resonance exciton coupling" weakly involving the dimer hydrogen bonds. For the "beta" phase, with practically symmetric dimers in the lattice, the spectra become typical for centrosymmetric hydrogen bond systems due to the full resonance of the proton or deuteron vibrations.
- Published
- 2011
- Full Text
- View/download PDF
46. 6-Chloro-2-oxindole: X-ray and DFT-calculated study.
- Author
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Hachuła B, Zerzucha P, Zubko M, and Kusz J
- Abstract
The molecule of the title compound (systematic name: 6-chloroindolin-2-one), C(8)H(6)ClNO, is almost planar, with a dihedral angle of 1.13 (9)° between the planes of the constituent pyrrolidine and benzene rings. Centrosymmetric dimers are formed in the crystal structure by N-H···O hydrogen bonds, and these dimers are additionally linked by Cl···Cl and C-H···O interactions. Density functional theory (DFT) calculations at the B3LYP/6-31 G(d,p) level of theory were used to optimize the molecular structure and the geometry was best reproduced by optimization of two interacting molecules. The bond orders in the molecule, estimated using the natural bond orbitals (NBO) formalism, are consistent with the observed bond lengths. In particular, the contribution of the lone pair of electrons on the N atom to the N-C bond in the N-C=O group is revealed. The measured IR spectrum of the compound shows a red shift of the N-H stretching frequency compared with the free molecule, due to the formation of the hydrogen bonds.
- Published
- 2011
- Full Text
- View/download PDF
47. Effect of the resonance of the C-H and O-H bond stretching vibrations on the IR spectra of the hydrogen bond in formic and acetic acid.
- Author
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Flakus HT and Hachuła B
- Subjects
- Hydrogen Bonding, Temperature, Vibration, Acetic Acid chemistry, Formates chemistry, Spectrophotometry, Infrared
- Abstract
It is shown that the resonance of the O-H and C-H bond stretching vibrations is responsible for a noticeable intensity redistribution effect in the IR spectra of associated formic acid molecules in the gaseous phase. This effect is manifested by a considerably high growth in intensity of the νC-H band, which overlaps the νO-H band contour in the spectra. A vibronic coupling of the Herzberg-Teller-type expressed by the second order term in the perturbation theory is the most probable source of these spectral effects. The presented mechanism explains the variation of the effect magnitude accompanying the phase transitions. The proposed model also facilitates the understanding of the H/D isotopic effects in the spectra as well as the essential difference in the corresponding spectral properties between the formic and the acetic acid., (Copyright © 2011 Elsevier B.V. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
48. H/D isotopic recognition in hydrogen-bonded systems: strong dynamical coupling effects in the polarized IR spectra of 3-methylthioacetanilide and 4-methylthioacetanilide crystals.
- Author
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Flakus HT, Śmiszek-Lindert W, and Hachuła B
- Abstract
This paper presents the investigation results of the polarized IR spectra of the hydrogen bond in crystals of 3- and 4-methylthioacetanilide. The spectra were measured at 293 and 77 K by a transmission method, with the use of polarized light. The main spectral properties of the crystals can be interpreted satisfactorily in terms of the "strong-coupling" theory, on the basis of the hydrogen bond centrosymmetric dimer model. The spectra revealed that the strongest vibrational exciton coupling involved the closely spaced hydrogen bonds, each belonging to a different chain of associated 3- and 4-methylthioacetanilide molecules. A weaker exciton coupling involved the adjacent hydrogen bonds in each individual chain. It was proven that a nonrandom distribution of the protons and deuterons took place in the lattices of isotopically diluted crystalline samples of 3- and 4-methylthioacetanilide. In each case, the H/D isotopic "self-organization" mechanism involved all four hydrogen bonds from each unit cell.
- Published
- 2011
- Full Text
- View/download PDF
49. Diaquadichloridobis(1H-imidazole)manganese(II) at 100 K.
- Author
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Hachuła B, Pedras M, Pentak D, Nowak M, Kusz J, and Borek J
- Subjects
- Crystallography, X-Ray, Hydrogen Bonding, Ligands, Molecular Structure, Thermogravimetry, Water, Manganese chemistry, Organometallic Compounds chemistry
- Abstract
The mononuclear title complex, [MnCl(2)(C(3)H(4)N(2))(2)(H(2)O)(2)], is located on a crystallographic inversion center. The Mn(II) ion is coordinated by two imidazole ligands [Mn-N = 2.2080 (9) A], two Cl atoms [Mn-Cl = 2.5747 (3) A] and two water molecules [Mn-O = 2.2064 (8) A]. These six monodentate ligands define an octahedron with almost ideal angles: the adjacent N-Mn-O, N-Mn-Cl and O-Mn-Cl angles are 90.56 (3), 92.04 (2) and 90.21 (2) degrees , respectively. Hydrogen bonds between the coordinated water molecules and Cl atoms form a two-dimensional network parallel to (100) involving R(4)(2)(8) rings. The two-dimensional networks link into a three-dimensional framework through weaker N-H...Cl interactions. Thermogravimetric analysis results are in accordance with the water-coordinated character of the substance and its dehydration in two successive steps.
- Published
- 2009
- Full Text
- View/download PDF
50. Redetermination of trans-beta-hydromuconic acid.
- Author
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Hachuła B, Jabłońska M, Nowak M, and Kusz J
- Subjects
- Crystallography, X-Ray, Models, Molecular, Molecular Structure, Sorbic Acid chemistry, Spectrophotometry, Infrared, Sorbic Acid analogs & derivatives
- Abstract
The title compound (systematic name: trans-hex-3-enedioic acid), C(6)H(8)O(4), (I), is located on an inversion centre. A less accurate room-temperature structure has been reported previously [Ganis & Martuscelli (1966). Ric. Sci. 36, 439], without the position of the H atom involved in hydrogen bonding. The carboxylic acid groups of (I) link molecules across inversion centres through O-H...O hydrogen-bonded pairs. The result of these interactions is the formation of chains with the graph-set description C(2)(2)(18), which run along the c axis. The significance of this study lies in the analysis of the interactions occurring via hydrogen bonds, as well as in the comparison drawn between the molecular structure of (I) and the structures of several other acid derivatives possessing two carboxylic acid groups.
- Published
- 2008
- Full Text
- View/download PDF
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