15 results on '"HIERARCHICAL PROCESSES"'
Search Results
2. Bayesian prediction with multiple-samples information.
- Author
-
Camerlenghi, Federico, Lijoi, Antonio, and Prünster, Igor
- Subjects
- *
BAYESIAN analysis , *INFORMATION theory , *LOGICAL prediction , *NONPARAMETRIC estimation , *SIMULATION methods & models , *MEASURE theory - Abstract
The prediction of future outcomes of a random phenomenon is typically based on a certain number of “analogous” observations from the past. When observations are generated by multiple samples, a natural notion of analogy is partial exchangeability and the problem of prediction can be effectively addressed in a Bayesian nonparametric setting. Instead of confining ourselves to the prediction of a single future experimental outcome, as in most treatments of the subject, we aim at predicting features of an unobserved additional sample of any size. We first provide a structural property of prediction rules induced by partially exchangeable arrays, without assuming any specific nonparametric prior. Then we focus on a general class of hierarchical random probability measures and devise a simulation algorithm to forecast the outcome of m future observations, for any m ≥ 1 . The theoretical result and the algorithm are illustrated by means of a real dataset, which also highlights the “borrowing strength” behavior across samples induced by the hierarchical specification. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
3. Challenges in discovering patient journey processes
- Author
-
Tony Hoang, Georg Grossmann, Jan Stanek, Markus Stumptner, Hoang, Tony, Grossmann, Georg, Stanek, Jan, Stumptner, Markus, and Australasian Computer Science Week, ACSW 2022 Virtual, online 14-17 February 2022
- Subjects
terminology matching ,process mining ,complex systems ,hierarchical processes - Abstract
Research in the area of process analytics has become useful in providing new insights into patient care and support decision making. In order to reach the full potential of process analytics, we must look into further details and address challenges when applying it to real world scenarios which are often represented by complex systems. One area that has not been explored thoroughly is the ability to identify how processes relate to each other in a network of processes. Different often overlapping information about someone or something will always be kept in different domains. There is rarely a chance for these pieces of information to all link together and access them directly. Having access to the relation between processes and seeing an overall picture of network of process helps to better understanding a complex system and further analyse it to make better and informed decisions. However, attempts to link these processes into a network has led to challenges which have not been resolved yet. The contribution is a detailed use case that highlights existing challenges in discovering patient journey processes and two experimentation with preliminary results on addressing some of the identified challenges. The first experiment investigated compliance checking of clinical processes against guidelines and the second investigated the matching of event labels with an existing processable collection of health terms. The results of both experiments showed that further research and tool development is required to increase the automation for compliance checking and improve the accuracy of event and term matching Refereed/Peer-reviewed
- Published
- 2022
4. Survival analysis via hierarchically dependent mixture hazards
- Author
-
Federico Camerlenghi, Antonio Lijoi, Igor Prünster, Camerlenghi, F, Lijoi, A, and Pruenster, I
- Subjects
Statistics and Probability ,Hazard (logic) ,Multivariate statistics ,Bayesian probability ,HIERARCHICAL PROCESSES ,computer.software_genre ,HAZARD RATE MIXTURES ,01 natural sciences ,Generalized gamma processe ,Completely random measure ,Bayesian Nonparametric ,BAYESIAN NONPARAMETRICS, COMPLETELY RANDOM MEASURES, GENERALIZED GAMMA PROCESSES, HAZARD RATE MIXTURES, HIERARCHICAL PROCESSES, META-ANALYSIS, PARTIAL EXCHANGEABILITY ,010104 statistics & probability ,Consistency (statistics) ,GENERALIZED GAMMA PROCESSES ,Covariate ,Prior probability ,Meta-analysi ,0101 mathematics ,Mathematics ,PARTIAL EXCHANGEABILITY ,Nonparametric statistics ,COMPLETELY RANDOM MEASURES ,Hazard rate mixture ,META-ANALYSIS ,SECS-S/01 - STATISTICA ,Probability distribution ,Data mining ,Statistics, Probability and Uncertainty ,BAYESIAN NONPARAMETRICS ,Hierarchical processe ,computer - Abstract
Hierarchical nonparametric processes are popular tools for defining priors on collections of probability distributions, which induce dependence across multiple samples. In survival analysis problems, one is typically interested in modeling the hazard rates, rather than the probability distributions themselves, and the currently available methodologies are not applicable. Here, we fill this gap by introducing a novel, and analytically tractable, class of multivariate mixtures whose distribution acts as a prior for the vector of sample-specific baseline hazard rates. The dependence is induced through a hierarchical specification of the mixing random measures that ultimately corresponds to a composition of random discrete combinatorial structures. Our theoretical results allow to develop a full Bayesian analysis for this class of models, which can also account for right-censored survival data and covariates, and we also show posterior consistency. In particular, we emphasize that the posterior characterization we achieve is the key for devising both marginal and conditional algorithms for evaluating Bayesian inferences of interest. The effectiveness of our proposal is illustrated through some synthetic and real data examples.
- Published
- 2021
5. Developing Scaffolds in Evolution, Culture, and Cognition
- Author
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Caporael, Linnda R., editor, Griesemer, James R., editor, and Wimsatt, William C., editor
- Published
- 2013
- Full Text
- View/download PDF
6. Molecular Pom Poms from Self-Assembling α,γ-Cyclic Peptides.
- Author
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Panciera, Michele, Amorín, Manuel, and Granja, Juan R.
- Subjects
- *
CYCLIC peptides , *NIACIN , *FUNCTIONAL groups , *POROSITY , *PYRIDINE - Abstract
The hierarchical self-assembly properties of a dimer-forming cyclic peptide that bears a nicotinic acid moiety to form molecular pom-pom-like structures are described. This dimeric assembly self organizes into spherical structures that can encapsulate small organic molecules owing to its porosity and it can also facilitate metal deposition on its surface directed by the pyridine moiety. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
7. ЗАДАЧИ ИЕРАРХИЧЕСКОЙ ОПТИМИЗАЦИИ
- Subjects
ИЕРАРХИЧЕСКИЕ ПРОЦЕССЫ ,МОБИЛЬНЫЙ РОБОТ ,CONTROL SYSTEM ,MOBILE ROBOT ,HIERARCHICAL PROCESSES ,РОБОТОТЕХНИЧЕСКИМ КОМПЛЕКС ,ROBOTIC COMPLEX ,OPTIMIZATION ,СИСТЕМА УПРАВЛЕНИЯ ,ОПТИМИЗАЦИЯ - Abstract
Разработана общая структура решения задачи оптимизации, основанная на использовании метода нисходящего проектирования, показано, что вариации проектных решений можно рассматривать как структурно-параметрические. Структурная часть задачи заключается в возможности для реализации в циклограммах различных, отличающихся друг от друга последовательностей выполнения операции. Параметрический аспект заключается в возможности использования различных программных модулей.
- Published
- 2020
- Full Text
- View/download PDF
8. A multiple-scale analysis of host plant selection in Lepidoptera.
- Author
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Dickins, Emily, Yallop, Adrian, and Perotto-Baldivieso, Humberto
- Subjects
LEPIDOPTERA ,INSECT host plants ,NATURAL selection ,MULTIPLE scale method ,POLLINATORS ,OVIPARITY ,INSECTS - Abstract
Lepidoptera play an important role in terrestrial ecosystems as pollinators, as components of the food chain and as indicators for healthy ecosystems due to their sensitivity to change. Heterogeneous landscapes with variability of topographical features, vegetation structure combined with food sources for all life stages are the basis for successful lepidopteran oviposition. A multiple-scale analysis is proposed to understand the hierarchical relationships between selected site to plant characteristics and oviposition preferences for the dingy skipper ( Erynnis tages). To achieve this goal, factors driving oviposition at the plant and patch scale were identified and scale dependencies at the site scale were assessed. At the plant scale, tallest host plants were used for oviposition; however relative egg height upon each plant was similar in both host plant species [bird's-foot trefoil ( Lotus corniculatus) and horseshoe vetch ( Hippocrepis comosa)]. The main factors preferred by E. tages in L. corniculatus patches were sward height and percent of bare ground, and in H. comosa host plant density patches. Selected patches had slopes of greater gradients (mostly facing south) than patches with no selected host plants. At the site scale, oviposition patches were clustered at small scales and oviposition sites were dispersed at larger scales. Our study suggests that oviposition selection in E. tages is a hierarchical process varying from the site to the plant scale. Our study provides empirical evidence useful to inform landscape management strategies. These can be expanded to assess larger scale vegetation and habitat suitability beyond individual sites for systematic conservation planning. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
9. Resampling hierarchical processes in the wavelet domain: A case study using atmospheric turbulence
- Author
-
Angelini, Claudia, Cava, Daniela, Katul, Gabriel, and Vidakovic, Brani
- Subjects
- *
ATMOSPHERIC turbulence , *ATMOSPHERIC circulation , *TURBULENCE , *SPECTRUM analysis - Abstract
Abstract: There is a growing need for statistical methods that generate an ensemble of plausible realizations of a hierarchical process from a single run or experiment. The main challenge is how to construct such an ensemble in a manner that preserves the internal dynamics (e.g. intermittency) and temporal persistency. A popular hierarchical process often used as a case study in such problems is atmospheric turbulent flow. Analogies to turbulence are often called upon when information flow from large to small scales, non Gaussian statistics, and intermittency are inherent attributes of the hierarchical process under consideration. These attributes are key defining syndromes of the turbulent cascade thereby making turbulence time series ideal for testing such ensemble generation schemes. In this study, we propose a wavelet based resampling scheme (WB) and compare it to the traditional Fourier based phase randomization bootstrap (FB) approach within the context of the turbulence energy cascade. The comparison between the two resampling methods and observed ensemble statistics constructed by clustering similar meteorological conditions demonstrate that the WB reproduces several features related to intermittency of the ensemble series when compared to FB. In particular, the WB exhibited an increase in wavelet energy activity and an increase in the wavelet flatness factor with increasing frequency consistent with the cluster of ensemble statistics. On the other hand, the FB yielded no increase in such energy activity with scale and resulted in near Gaussian wavelet coefficients at all frequencies within the inertial subrange. The scaling behavior of the longitudinal () and vertical () velocity structure functions of various order confirms that WB preserves the small scale intermittency, whereas FB completely destroys it. The extension of WB to the multivariate case is also demonstrated via the conservation of co-spectra between and time series. Because the resampling strategy proposed here is conducted in the wavelet domain, gap-infected and uneven sampled time series can be readily accommodated within the WB. Finally, recommendations about the filter and block sizes are discussed. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
10. Bayesian prediction with multiple-samples information
- Author
-
Federico Camerlenghi, Antonio Lijoi, Igor Prnster, Camerlenghi, F, Lijoi, A, and Pruenster, I
- Subjects
Statistics and Probability ,Class (set theory) ,PREDICTION ,HIERARCHICAL PROCESSES ,Sample (statistics) ,02 engineering and technology ,computer.software_genre ,01 natural sciences ,010104 statistics & probability ,Bayesian nonparametric ,Pitman–Yor process ,0202 electrical engineering, electronic engineering, information engineering ,0101 mathematics ,Species sampling model ,Numerical Analysi ,Probability measure ,Mathematics ,Numerical Analysis ,PARTIAL EXCHANGEABILITY ,Nonparametric statistics ,Probability and statistics ,PITMAN–YOR PROCESS ,Outcome (probability) ,BAYESIAN NONPARAMETRICS, HIERARCHICAL PROCESSES, PARTIAL EXCHANGEABILITY, PREDICTION, PITMAN–YOR PROCESS, SPECIES SAMPLING MODELS ,SPECIES SAMPLING MODELS ,020201 artificial intelligence & image processing ,Data mining ,Statistics, Probability and Uncertainty ,Focus (optics) ,BAYESIAN NONPARAMETRICS ,Hierarchical processe ,computer ,PitmanâYor proce - Abstract
The prediction of future outcomes of a random phenomenon is typically based on a certain number of “analogous” observations from the past. When observations are generated by multiple samples, a natural notion of analogy is partial exchangeability and the problem of prediction can be effectively addressed in a Bayesian nonparametric setting. Instead of confining ourselves to the prediction of a single future experimental outcome, as in most treatments of the subject, we aim at predicting features of an unobserved additional sample of any size. We first provide a structural property of prediction rules induced by partially exchangeable arrays, without assuming any specific nonparametric prior. Then we focus on a general class of hierarchical random probability measures and devise a simulation algorithm to forecast the outcome of m future observations, for any m≥1. The theoretical result and the algorithm are illustrated by means of a real dataset, which also highlights the “borrowing strength” behavior across samples induced by the hierarchical specification.
- Published
- 2017
11. On some distributional properties of hierarchical processes
- Author
-
Camerlenghi, Federico, ANTONIO LIJOI, Igor Pruenster, Camerlenghi, F, Lijoi, A, and Pruenster, I
- Subjects
PARTIAL EXCHANGEABLITY ,PARTITION STRUCTURE ,HIERARCHICAL PROCESSES ,Bayesian Nonparametrics, hierarchical processes, partial exchangeablity, Pitman-Yor process, partition structure, posterior distribution ,BAYESIAN NONPARAMETRICS ,POSTERIOR DISTRIBUTION ,PITMAN-YOR PROCESS - Abstract
Vectors of hierarchical random probability measures are popular tools in Bayesian nonparametrics. They may be used as priors whenever partial exchangeability is assumed at the level of either the observations or of some latent variables involved in the model. The first contribution in this direction can be found in Teh et al. (2006), who introduced the hierarchical Dirichlet process. Recently, Camerlenghi et al. (2018) have developed a general distribution theory for hierarchical processes, which includes the derivation of the partition structure, the posterior distribution and the prediction rules. The present paper is a review of these theoretical findings for vectors of hierarchies of Pitman--Yor processes.
- Published
- 2017
12. Ordered Nanofibers Fabricated from Hierarchical Self-Assembling Processes of Designed α-Helical Peptides.
- Author
-
Li J, Zhao Y, Zhou P, Hu X, Wang D, King SM, Rogers SE, Wang J, Lu JR, and Xu H
- Subjects
- Hydrogen Bonding, Hydrophobic and Hydrophilic Interactions, Peptides, Nanofibers, Nanostructures
- Abstract
Peptide self-assembly is fast evolving into a powerful method for the development of bio-inspired nanomaterials with great potential for many applications, but it remains challenging to control the self-assembling processes and nanostrucutres because of the intricate interplay of various non-covalent interactions. A group of 28-residue α-helical peptides is designed including NN, NK, and HH that display distinct hierarchical events. The key of the design lies in the incorporation of two asparagine (Asn) or histidine (His) residues at the a positions of the second and fourth heptads, which allow one sequence to pack into homodimers with sticky ends through specific interhelical Asn-Asn or metal complexation interactions, followed by their longitudinal association into ordered nanofibers. This is in contrast to classical self-assembling helical peptide systems consisting of two complementary peptides. The collaborative roles played by the four main non-covalent interactions, including hydrogen-bonding, hydrophobic interactions, electrostatic interactions, and metal ion coordination, are well demonstrated during the hierarchical self-assembling processes of these peptides. Different nanostructures, for example, long and short nanofibers, thin and thick fibers, uniform metal ion-entrapped nanofibers, and polydisperse globular stacks, can be prepared by harnessing these interactions at different levels of hierarchy., (© 2020 Wiley-VCH GmbH.)
- Published
- 2020
- Full Text
- View/download PDF
13. Scale relationships and linkages between woody vegetation communities along a large tropical floodplain river, north Australia
- Author
-
Petty, Aaron M., Douglas, Michael M., Petty, Aaron M., and Douglas, Michael M.
- Abstract
Riparian vegetation varies according to hydrogeomorphic processes operating across different scales over two didmensions: transversely (across-stream) and longitudinally (parallel to stream). We tested the hypothesis that vegetation patterns reveal the scale and direction of underlying processes. We correlated patterns of dominant woody vegetation with environmental variables at 28 sites located within four geomorphologically distinct regions along the length of the South Alligator River catchment of Kakadu National Park, northern Australia. Across the catchment there existed a strong transverse boundary between upland savanna vegetation and two zones of riparian vegetation: Melaleuca-spp.-dominated closed-forest vegetation along stream channels and mixed open-woodland vegetation adjacent to closed forest. We surmise that there is hierarchic constraint on smaller-scale catchment processes due to fire incursion into the riparian zone and access to water during the dry season. Within the closed-forest zone, vegetation did not vary transversely, but did longitudinally. Riparian woodlands also varied longitudinally, but in the upper reaches varied independently of stream variables. By contrast, in the lower reaches woodland was strongly correlated with stream variables. The observed pattern of weak transverse linkages in headwaters but strong linkages in lower reaches is analogous to models developed for in-stream patterns and processes, particularly the river continuum and flood-pulse concepts.
- Published
- 2010
14. Resampling hierarchical processes in the wavelet domain: A case study using atmospheric turbulence
- Author
-
Brani Vidakovic, Gabriel G. Katul, Claudia Angelini, and Daniela Cava
- Subjects
Resampling ,Hierarchical Processes ,Gaussian ,Ergodicity ,Statistical and Nonlinear Physics ,Context (language use) ,Wavelets ,Condensed Matter Physics ,law.invention ,Turbulence ,symbols.namesake ,Filter (large eddy simulation) ,Wavelet ,law ,Intermittency ,Energy cascade ,Statistics ,symbols ,Statistical physics ,Mathematics - Abstract
There is a growing need for statistical methods that generate an ensemble of plausible realizations of a hierarchical process from a single run or experiment. The main challenge is how to construct such an ensemble in a manner that preserves the internal dynamics (e.g. intermittency) and temporal persistency. A popular hierarchical process often used as a case study in such problems is atmospheric turbulent flow. Analogies to turbulence are often called upon when information flow from large to small scales, non Gaussian statistics, and intermittency are inherent attributes of the hierarchical process under consideration. These attributes are key defining syndromes of the turbulent cascade thereby making turbulence time series ideal for testing such ensemble generation schemes. In this study, we propose a wavelet based resampling scheme (WB) and compare it to the traditional Fourier based phase randomization bootstrap (FB) approach within the context of the turbulence energy cascade. The comparison between the two resampling methods and observed ensemble statistics constructed by clustering similar meteorological conditions demonstrate that the WB reproduces several features related to intermittency of the ensemble series when compared to FB. In particular, the WB exhibited an increase in wavelet energy activity and an increase in the wavelet flatness factor with increasing frequency consistent with the cluster of ensemble statistics. On the other hand, the FB yielded no increase in such energy activity with scale and resulted in near Gaussian wavelet coefficients at all frequencies within the inertial subrange. The scaling behavior of the longitudinal ( u ′ ) and vertical ( w ′ ) velocity structure functions of various order p > 0 confirms that WB preserves the small scale intermittency, whereas FB completely destroys it. The extension of WB to the multivariate case is also demonstrated via the conservation of co-spectra between u ′ and w ′ time series. Because the resampling strategy proposed here is conducted in the wavelet domain, gap-infected and uneven sampled time series can be readily accommodated within the WB. Finally, recommendations about the filter and block sizes are discussed.
- Published
- 2005
- Full Text
- View/download PDF
15. DISTRIBUTION THEORY FOR HIERARCHICAL PROCESSES
- Author
-
Camerlenghi, Federico, Lijoi, Antonio, Orbanz, Peter, and Prünster, Igor
- Published
- 2019
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