Search

Your search keyword '"Häse, Claudia C."' showing total 176 results
Start Over Author "Häse, Claudia C."
176 results on '"Häse, Claudia C."'

10. Additional file 7 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Abstract

Additional file 7 Fig. S4. Count distributions of bactNOG functional categories of genes among categories of different gene sets. The “Core in All” column refers to the core genome (n = 1693 gene clusters) of all strains (n = 51). The “Core in Non-Pathogens” column refers to the core genome (n = 1775 gene clusters) of all strains (n = 34) that are non-pathogenic (0.5 or lower mortality ratio). The “Core in Pathogens” column refers to the core genome (n = 2646 gene clusters) of pathogenic strains. The “Exclusive to Non-Pathogens” column refers to genes (n = 4010 gene clusters) that are found only in non-pathogens, but not necessarily conserved. The “Exclusive to Pathogens” column refers to genes (n = 1981 gene clusters) that are found only in pathogens, but not necessarily conserved. The “Flexible” column refers to genes (n = 3345 gene clusters) that are found at least once in both pathogens and non-pathogens, but are not conserved in either. The “Phyloglm Significant with Mortalities” column refers to all genes (n = 509 gene clusters) that had a significant correlation with pathogenicity towards C. gigas larvae.

Published
2020
Full Text
View/download PDF

11. Additional file 8 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Abstract

Additional file 8 Fig. S5. Gene organization of the CPI-1 region within the complete genome of V. coralliilyticus RE22 and the draft genome of V. pectenicida 99–46-Y. Pink arrows indicate that the gene had a negative correlation with larval survival in virulence assays. Blue arrows indicate that there was no significant correlation with survival or that the gene was not tested. Yellow slashed lines indicate contig breaks on the CPI-1 of the V. pectenicida strain 99–46-Y draft genome.

Published
2020
Full Text
View/download PDF

12. Additional file 9 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Abstract

Additional file 9 Fig. S6. Predicted phylogeny of Type 3 Secretion Systems using SctV amino acid sequences. Clades are color coded. Included in the phylogeny are proteins from tested isolates, specific Vibrio reference genomes, and from COG4789 comprised of more diverse reference genomes. Scale bar represents one change per amino acid. Tree was visualized with iTOL.

Published
2020
Full Text
View/download PDF

13. Additional file 3 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Abstract

Additional file 3 Fig. S2. Phylogenetic Tree of strains used in this study and reference strains. A concatenated alignment of 686 conserved amino acid sequences from single copy orthologous genes was used to construct a maximum likelyhood phylogeny.

Published
2020
Full Text
View/download PDF

14. Additional file 2 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Subjects
body regions
Abstract

Additional file 2 Fig. S1. Heatmap and dendrogram of Average Nucleotide Identity (ANI) calculations between pairs of different Vibrio strains, including strains used in this study and reference strains. ANI of ≥95% with a Type Strain of a species was used for species designation of newly sequenced strains. Strains without ANI ≥ 95% with any Type Strain were designated “sp.”

Published
2020
Full Text
View/download PDF

15. Additional file 4 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

Author

Kehlet-Delgado, Hanna, Häse, Claudia C., and Mueller, Ryan S.

Abstract

Additional file 4 Fig. S3. Core and Pan-genome of 51 isolates in this study. (A) the core-genome represents all genes shared by each genome added. (B) The pan-genome represents the accumulation of all genes among all genomes with the addition of each genome.

Published
2020
Full Text
View/download PDF

16. Disease Diagnostics and Potential Coinfections by Vibrio coralliilyticus During an Ongoing Coral Disease Outbreak in Florida

Author

Ushijima, Blake, primary, Meyer, Julie L., additional, Thompson, Sharon, additional, Pitts, Kelly, additional, Marusich, Michael F., additional, Tittl, Jessica, additional, Weatherup, Elizabeth, additional, Reu, Jacqueline, additional, Wetzell, Raquel, additional, Aeby, Greta S., additional, Häse, Claudia C., additional, and Paul, Valerie J., additional

Published
2020
Full Text
View/download PDF

17. The aerobic respiratory chain of Pseudomonas aeruginosa cultured in artificial urine media: Role of NQR and terminal oxidases

Author

Liang, Pingdong, primary, Fang, Xuan, additional, Hu, Yuyao, additional, Yuan, Ming, additional, Raba, Daniel A., additional, Ding, Jie, additional, Bunn, Dakota C., additional, Sanjana, Krithica, additional, Yang, Jun, additional, Rosas-Lemus, Monica, additional, Häse, Claudia C., additional, Tuz, Karina, additional, and Juárez, Oscar, additional

Published
2020
Full Text
View/download PDF

28. Knowledge, Attitudes and Practices Regarding Raw Milk Consumption in the Pacific Northwest.

Author

Bigouette, John Paul, Bethel, Jeffrey W., Bovbjerg, Marit L., Waite-Cusic, Joy G., Häse, Claudia C., and Poulsen, Keith P.

Subjects
RAW milk, DAIRY products, FOODBORNE diseases, PASTEURIZATION of milk
Abstract

Currently, the majority of foodborne outbreaks associated with milk products are due to the consumption of raw milk. Relatively little knowledge is available as to why consumers choose to drink raw milk instead of pasteurized milk. To determine the knowledge, attitudes and practices related to raw milk consumption, a survey was performed using questionnaires distributed via online ads targeting users in the Pacific Northwest. Descriptive statistics were generated to characterize the study population and bivariate analyses were performed to determine differences in knowledge, attitudes and practices among identified consumption groups (i.e., current, former, never). We further identified current consumers as exclusive or non-exclusive. A total of 227 questionnaires were completed. Former raw milk consumers most often cited convenience (35.8%) as the reason for not consuming raw milk. Current raw milk consumers most often cited the reason for drinking raw milk as taste (72.4%) and perceived holistic health benefits (67.2%). Also, 67.9% of current consumers reported not trusting state health officials' recommendations regarding food safety. Raw milk consumers, particularly those who consume raw milk exclusively, reported health benefits and concerns about the safety of pasteurized milk as reasons for consuming raw milk, providing themes for future interventions to address. [ABSTRACT FROM AUTHOR]

Published
2018

34. Na + /H + Antiport Is Essential for Yersinia pestis Virulence

Author

Minato, Yusuke, primary, Ghosh, Amit, additional, Faulkner, Wyatt J., additional, Lind, Erin J., additional, Schesser Bartra, Sara, additional, Plano, Gregory V., additional, Jarrett, Clayton O., additional, Hinnebusch, B. Joseph, additional, Winogrodzki, Judith, additional, Dibrov, Pavel, additional, and Häse, Claudia C., additional

Published
2013
Full Text
View/download PDF

Catalog

Books, media, physical & digital resources
See catalog results