30 results on '"Grossman MJ"'
Search Results
2. Emotion regulation relates to clinical characteristics and quality of life but not daily functioning in psychosis spectrum outpatients.
- Author
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Pishdadian S, Martins F, Milanovic M, Doell FK, Kidd SA, and Grossman MJ
- Subjects
- Humans, Quality of Life, Outpatients, Cognition, Emotional Regulation, Psychotic Disorders diagnosis
- Abstract
Difficulties in emotion regulation (ER) can negatively impact the clinical course and outcomes of a range of psychiatric conditions, including psychosis spectrum disorders. Individuals with psychosis may exhibit poorer ER abilities, which have been associated with increased severity and distress of psychotic symptoms. A paucity of research has investigated the clinical correlates of ER in psychosis and the influence of these difficulties on indices of recovery, such as daily functioning and quality of life. In the present study, 59 outpatients presenting for Cognitive Behaviour Therapy for psychosis (CBTp) in a large psychiatric hospital completed an intake assessment of clinician-rated and self-reported measures prior to treatment. Poor ER abilities were positively correlated with positive symptoms (overall and delusions), social anxiety, depression, and self-reflectiveness and negatively correlated with quality of life and personal recovery. Multiple regression analyses showed ER was a significant predictor of quality of life but not daily functioning, which was predicted most by cognition and psychiatric symptoms. Overall, findings support the clinical utility of assessing emotion dysregulation in psychosis and provide a more nuanced understanding of how such challenges differentially influence recovery in psychosis, which can further inform treatment planning and intervention., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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3. Increasing Access to CBT for Psychosis: Development, Feasibility, and Acceptability of a Specialized Outpatient Service.
- Author
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Grossman MJ, Doell FK, Watson-Gaze J, Baer LH, Martins F, and Kidd SA
- Subjects
- Male, Humans, Female, Feasibility Studies, Ambulatory Care, Ontario, Psychotic Disorders therapy, Psychotic Disorders psychology, Cognitive Behavioral Therapy
- Abstract
Despite the increasing demand for cognitive behavioural therapy for psychosis (CBTp), the existing literature is lacking in terms of models for sustainable implementation. The aims of this study were to: (a) describe the development of a specialized CBTp Service; (b) report demographic characteristics and referral patterns over 1 year to examine feasibility; and (c) review feedback from participants in group-based CBTp to examine acceptability. Data were analyzed from 126 referrals (M = 35.52, SD = 13.06, 59.5% men) to an outpatient CBTp Service at the Centre for Addiction and Mental Health (Toronto, Ontario) between January 2019 to January 2020. Anonymous feedback was obtained from 54 individuals who completed group-based CBTp. Positive symptoms and distressing emotions were the main reasons for referral. Over half of eligible referrals scheduled an intake assessment and 70% of individuals who completed this assessment attended further treatment. Primary reasons for service refusal were scheduling conflicts and illness-related barriers. The total service wait-time was two months, with the longest delay between dates of referral and initial contact. Satisfaction with the quality of CBTp and its components was rated high among group members. Although variable wait-times and engagement levels were identified across stages of the referral process, the CBTp Service demonstrates preliminary feasibility and acceptability, and provides a model of service delivery to incorporate within future CBTp implementation efforts in Canada., (© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2022
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4. Money talks: The influence of extrinsic motivators on social cognition in early episode psychosis.
- Author
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Grossman MJ and Bowie CR
- Subjects
- Cognition, Cross-Sectional Studies, Humans, Neuropsychological Tests, Social Cognition, Psychotic Disorders complications, Psychotic Disorders drug therapy, Theory of Mind
- Abstract
Amotivation is a central feature of psychosis that can lead to underperformance on a variety of tasks, including neurocognitive testing; however, there is some evidence that neurocognitive impairments resulting from low effort can be ameliorated with the use of monetary reinforcement. While cross-sectional data has also shown that amotivation is associated with social cognitive performance, limited research has examined the directionality of this relationship, and whether monetary reinforcement can similarly reduce these impairments. In the present study, 35 patients with early psychosis and 35 community controls were randomized to either a reward condition in which they received monetary reinforcement for every correct response on a theory of mind (ToM) task, or a non-reward condition in which no feedback was provided. A significant group by condition interaction emerged after adjusting for premorbid intelligence and global neurocognition, F(1, 63) = 7.76, p = .007. Post-hoc analyses revealed that performance on the ToM task was similar across conditions for controls, whereas early psychosis patients in the reward condition had clinically and statistically significant differences in ToM performance compared to patients in the non-reward condition. These results suggest that social cognitive task performance may underrepresent actual ability in the early stages of psychosis. Future research is needed to discriminate the relative effects of monetary reinforcement, corrective feedback, and/or a combination of these factors to better understand performance differences between conditions, which appeared to be unique to early psychosis patients., (Copyright © 2021 Elsevier B.V. All rights reserved.)
- Published
- 2021
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5. Patterns and perceptions of face-to-face and digital communication in the clinical high risk and early stages of psychosis.
- Author
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Grossman MJ, Woolridge S, Lichtenstein S, McLaughlin D, Auther AM, Carrión RE, Cornblatt BA, and Bowie CR
- Subjects
- Adolescent, Adult, Case-Control Studies, Female, Humans, Male, Surveys and Questionnaires, Young Adult, Communication, Interpersonal Relations, Psychotic Disorders psychology
- Abstract
Digital communication can mitigate some of the challenges inherent in face-to-face communication; however, it is unclear whether this communication format is preferred among youth with emerging psychosis. Therefore, we examined characteristics of face-to-face and digital communication in youth at clinical high risk for psychosis (CHR; n = 19) or in the first episode of psychosis (FEP; n = 57), as well as age-matched community comparisons (n = 51). Participants completed a 25-item self-report questionnaire to assess between- and within-group differences in the frequency of, satisfaction with, and barriers to face-to-face and digital communication. Compared to controls, both clinical groups endorsed a lower frequency of face-to-face and digital interactions across a range of communication partners. Controls reported higher satisfaction and fewer challenges with both communication formats than CHR and FEP groups. No between-group differences were identified among clinical participants in characteristics of face-to-face and digital interactions. Youth at clinical high risk for, or in the first episode of, psychosis exhibited similar communication patterns and perceptions that significantly diverged from community controls. These findings highlight that reductions in the quality and quantity of social interactions extend to digital contexts, and that both communication formats are relevant clinical targets in the high risk and early stages of psychosis., Competing Interests: Declaration of Competing Interest Within the past three years, C.R.B. has served as a consultant for Boehringer Ingelheim, Pfizer, and Lundbeck, and has received grant support from Pfizer, Lundbeck and Takeda. In-Kind Research Support has been provided by Scientific Brain Training, and royalties from Oxford University Press. All other authors report no financial relationships with commercial interests., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2020
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6. Jumping to social conclusions?: The implications of early and uninformed social judgements in first episode psychosis.
- Author
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Grossman MJ and Bowie CR
- Subjects
- Adolescent, Adult, Female, Humans, Male, Young Adult, Judgment, Psychotic Disorders psychology, Social Perception
- Abstract
Although social cognition is now understood to be a key determinant of functional outcome in psychosis, the factors associated with impaired performance on tasks of social cognition still remain unclear. Jumping to conclusions (JTC) is a cognitive bias that is commonly observed in psychosis, and features of this bias may be implicated in the accurate processing of social information. In the present study, a sample of patients in the early stages of psychosis ( n = 35) and demographically matched community controls ( n = 35) were presented with a modified version of the Interpersonal Perception Task in which video clips of naturalistic social scenarios were paused at 3 predetermined time points. All participants were prompted to answer a series of questions during these time points to examine the processes by which individuals arrive at social judgments. A JTC response pattern was defined as endorsing overconfident responses and a low need for additional social information at the beginning time points of the video clips when limited social cues were available. Compared with controls, a greater proportion of patients exhibited a response pattern suggestive of JTC, which was also strongly associated with poorer overall task accuracy, regardless of group status. Results from this study provide evidence that overconfidence in premature and uninformed social judgments has direct consequences for the accurate processing of social information. Furthermore, this response pattern, which was more characteristic of early psychosis patients, may represent JTC in real-world social contexts, and could be an important therapeutic target for social cognition in the early stages of illness. (PsycINFO Database Record (c) 2019 APA, all rights reserved).
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- 2020
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7. Complex networks for tracking extreme rainfall during typhoons.
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Ozturk U, Marwan N, Korup O, Saito H, Agarwal A, Grossman MJ, Zaiki M, and Kurths J
- Abstract
Reconciling the paths of extreme rainfall with those of typhoons remains difficult despite advanced forecasting techniques. We use complex networks defined by a nonlinear synchronization measure termed event synchronization to track extreme rainfall over the Japanese islands. Directed networks objectively record patterns of heavy rain brought by frontal storms and typhoons but mask out contributions of local convective storms. We propose a radial rank method to show that paths of extreme rainfall in the typhoon season (August-November, ASON) follow the overall southwest-northeast motion of typhoons and mean rainfall gradient of Japan. The associated eye-of-the-typhoon tracks deviate notably and may thus distort estimates of heavy typhoon rainfall. We mainly found that the lower spread of rainfall tracks in ASON may enable better hindcasting than for westerly-fed frontal storms in June and July.
- Published
- 2018
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8. The Emergence of Different Functionally Equivalent PAH Degrading Microbial Communities from a Single Soil in Liquid PAH Enrichment Cultures and Soil Microcosms Receiving PAHs with and without Bioaugmentation.
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Piubeli FA, Dos Santos LG, Fernández EN, DA Silva FH, Durrant LR, and Grossman MJ
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- Alphaproteobacteria metabolism, Bacteria genetics, Betaproteobacteria metabolism, RNA, Ribosomal, 16S, Soil chemistry, Soil Pollutants metabolism, Bacteria metabolism, Biodegradation, Environmental, Microbiota, Polycyclic Aromatic Hydrocarbons metabolism, Soil Microbiology
- Abstract
Polycyclic aromatic hydrocarbon (PAHs) are common soil contaminants of concern due to their toxicity toward plants, animals and microorganisms. The use of indigenous or added microbes (bioaugmentation) is commonly used for bioremediation of PAHs. In this work, the biodegradation rates and changes in the bacterial community structure were evaluated. The enrichment culture was useful for unambiguously identifying members of the soil bacterial community associated with PAH degradation and yielded a low diversity community. No significant difference in the rate of PAH degradation was observed between the microcosm receiving only PAHs or PAHs and bioaugmentation. Moreover, identical matches to the bioaugmentation inoculum were only observed at the initial stages of PAH degradation on day 8. After 22 days of incubation, the substantial degradation of all PAHs had occurred in both microcosms and the PAH contaminated soil had statistically significant increases in Alphaproteobacteria. There were also increases in Betaproteobacteria. In contrast, the PAH contaminated and bioaugmented soil was not enriched in PAH degrading Proteobacteria genera and, instead, an increase from 1.6% to 8% of the population occurred in the phylum Bacteroidetes class Flavobacteria, with Flavobacterium being the only identified genus. In addition, the newly discovered genus Ohtaekwangia increased from 0% to 3.2% of the total clones. These results indicate that the same soil microbial community can give rise to different PAH degrading consortia that are equally effective in PAH degradation efficiency. Moreover, these results suggest that the lack of efficacy of bioaugmentation in soils can be attributed to a lack of persistence of the introduced microbes, yet nonetheless may alter the microbial community that arises in response to PAH contamination in unexpected ways., (© 2018 Francine Amaral Piubeli et al.)
- Published
- 2018
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9. Phylogenetic analysis of the microbial community in hypersaline petroleum produced water from the Campos Basin.
- Author
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Piubeli F, Grossman MJ, Fantinatti-Garboggini F, and Durrant LR
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- Biodegradation, Environmental, Biological Oxygen Demand Analysis, Brazil, Molecular Sequence Data, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Temperature, Archaea genetics, Bacteria genetics, Petroleum analysis, Phylogeny, Salinity, Wastewater microbiology, Water Microbiology
- Abstract
In this work the archaea and eubacteria community of a hypersaline produced water from the Campos Basin that had been transported and discharged to an onshore storage facility was evaluated by 16S recombinant RNA (rRNA) gene sequence analysis. The produced water had a hypersaline salt content of 10 (w/v), had a carbon oxygen demand (COD) of 4,300 mg/l and contains phenol and other aromatic compounds. The high salt and COD content and the presence of toxic phenolic compounds present a problem for conventional discharge to open seawater. In previous studies, we demonstrated that the COD and phenolic content could be largely removed under aerobic conditions, without dilution, by either addition of phenol degrading Haloarchaea or the addition of nutrients alone. In this study our goal was to characterize the microbial community to gain further insight into the persistence of reservoir community members in the produced water and the potential for bioremediation of COD and toxic contaminants. Members of the archaea community were consistent with previously identified communities from mesothermic reservoirs. All identified archaea were located within the phylum Euryarchaeota, with 98 % being identified as methanogens while 2 % could not be affiliated with any known genus. Of the identified archaea, 37 % were identified as members of the strictly carbon-dioxide-reducing genus Methanoplanus and 59 % as members of the acetoclastic genus Methanosaeta. No Haloarchaea were detected, consistent with the need to add these organisms for COD and aromatic removal. Marinobacter and Halomonas dominated the eubacterial community. The presence of these genera is consistent with the ability to stimulate COD and aromatic removal with nutrient addition. In addition, anaerobic members of the phyla Thermotogae, Firmicutes, and unclassified eubacteria were identified and may represent reservoir organisms associated with the conversion hydrocarbons to methane.
- Published
- 2014
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10. Phenol degradation by halophilic bacteria isolated from hypersaline environments.
- Author
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Bonfá MR, Grossman MJ, Piubeli F, Mellado E, and Durrant LR
- Subjects
- Amino Acid Sequence, Biodegradation, Environmental drug effects, Dioxygenases chemistry, Dioxygenases metabolism, Genes, Bacterial, Halomonadaceae drug effects, Halomonadaceae genetics, Halomonadaceae growth & development, Molecular Sequence Data, Phenol pharmacology, Phylogeny, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Environment, Halomonadaceae isolation & purification, Phenol metabolism, Salinity
- Abstract
Phenol is a toxic aromatic compound used or produced in many industries and as a result a common component of industrial wastewaters. Phenol containing waste streams are frequently hypersaline and therefore require halophilic microorganisms for efficient biotreatment without dilution. In this study three halophilic bacteria isolated from different saline environments and identified as Halomonas organivorans, Arhodomonas aquaeolei and Modicisalibacter tunisiensis were shown to be able to grow on phenol in hypersaline media containing 100 g/L of total salts at a concentration of 3 mM (280 mg/L), well above the concentration found in most waste streams. Genes encoding the aromatic dioxygenase enzymes catechol 1,2 dioxygenase and protocatechuate 3,4-dioxygenase were present in all strains as determined by PCR amplification using primers specific for highly conserved regions of the genes. The gene for protocatechuate 3,4-dioxygenase was cloned from the isolated H. organivorans and the translated protein was evaluated by comparative protein sequence analysis with protocatechuate 3,4-dioxygenase proteins from other microorganisms. Although the analysis revealed a wide range of sequence divergence among the protocatechuate 3,4-dioxygenase family, all of the conserved domain amino acid structures identified for this enzyme family are identical or conservatively substituted in the H. organivorans enzyme.
- Published
- 2013
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11. Decolorization and biodegradation of reactive sulfonated azo dyes by a newly isolated Brevibacterium sp. strain VN-15.
- Author
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Franciscon E, Grossman MJ, Paschoal JA, Reyes FG, and Durrant LR
- Abstract
Azo dyes constitute the largest and most versatile class of synthetic dyes used in the textile, pharmaceutical, food and cosmetics industries and represent major components in wastewater from these industrial dying processes. Biological decolorization of azo dyes occurs efficiently under low oxygen to anaerobic conditions. However, this process results in the formation of toxic and carcinogenic amines that are resistant to further detoxification under low oxygen conditions. Moreover, the ability to detoxify these amines under aerobic conditions is not a wide spread metabolic activity. In this study we describe the use of Brevibacterium sp. strain VN-15, isolated from an activated sludge process of a textile company, for the sequential decolorization and detoxification of the azo dyes Reactive Yellow 107 (RY107), Reactive Black 5 (RB5), Reactive Red 198 (RR198) and Direct Blue 71 (DB71). Tyrosinase activity was observed during the biotreatment process suggesting the role of this enzyme in the decolorization and degradation process, but no-activity was observed for laccase and peroxidase. Toxicity, measured using Daphnia magna, was completely eliminated.
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- 2012
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12. Biodegradation of aromatic hydrocarbons by Haloarchaea and their use for the reduction of the chemical oxygen demand of hypersaline petroleum produced water.
- Author
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Bonfá MR, Grossman MJ, Mellado E, and Durrant LR
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- Archaea classification, Archaea genetics, Biodegradation, Environmental, Biological Oxygen Demand Analysis, Chromatography, High Pressure Liquid methods, Petroleum analysis, Polycyclic Aromatic Hydrocarbons analysis, RNA, Ribosomal, 16S chemistry, Sodium Chloride chemistry, Water Pollutants, Chemical analysis, Archaea metabolism, Petroleum metabolism, Polycyclic Aromatic Hydrocarbons metabolism, Water Pollutants, Chemical metabolism
- Abstract
Ten halophilic Archaea (Haloarchaea) strains able to degrade aromatic compounds were isolated from five hypersaline locations; salt marshes in the Uyuni salt flats in Bolivia, crystallizer ponds in Chile and Cabo Rojo (Puerto Rico), and sabkhas (salt flats) in the Persian Gulf (Saudi Arabia) and the Dead Sea (Israel and Jordan). Phylogenetic identification of the isolates was determined by 16S rRNA gene sequence analysis. The isolated Haloarchaea strains were able to grow on a mixture of benzoic acid, p-hydroxybenzoic acid, and salicylic acid (1.5mM each) and a mixture of the polycyclic aromatic hydrocarbons, naphthalene, anthracene, phenanthrene, pyrene and benzo[a]anthracene (0.3mM each). Evaluation of the extent of degradation of the mixed aromatic hydrocarbons demonstrated that the isolates could degrade these compounds in hypersaline media containing 20% NaCl. The strains were shown to reduce the COD of hypersaline crude oil reservoir produced waters significantly beyond that achieved using standard hydrogen peroxide treatment alone., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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13. Purification and structural characterization of fengycin homologues produced by Bacillus subtilis LSFM-05 grown on raw glycerol.
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de Faria AF, Stéfani D, Vaz BG, Silva ÍS, Garcia JS, Eberlin MN, Grossman MJ, Alves OL, and Durrant LR
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- Lipopeptides biosynthesis, Lipopeptides isolation & purification, Spectrometry, Mass, Electrospray Ionization, Spectroscopy, Fourier Transform Infrared, Surface-Active Agents isolation & purification, Surface-Active Agents metabolism, Tandem Mass Spectrometry, Bacillus subtilis metabolism, Glycerol metabolism, Lipopeptides chemistry, Surface-Active Agents chemistry
- Abstract
Raw glycerol is a byproduct of biodiesel production that currently has low to negative value for biodiesel producers. One option for increasing the value of raw glycerol is to use it as a feedstock for microbial production. Bacillus subtilis LSFM 05 was used for the production of fengycin in a mineral medium containing raw glycerol as the sole carbon source. Fengycin was isolated by acid precipitation at pH 2 and purified by silica gel column chromatography and characterized using electrospray ionization (ESI) Fourier transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS) with collision-induced dissociation (CID). The mass spectrum revealed the presence of the ions of m/z 1,435.7, 1,449.9, 1,463.8, 1,477.8, 1,491.8 and 1,505.8, which were further fragmented by ESI-MS/MS. The CID profile showed the presence of a series of ions (m/z 1,080 and 966) and (m/z 1,108 and 994) that represented the different fengycin homologues A and B, respectively. Fengycin homologues A and B are variants that differ at position 6 of the peptide moiety, having either Ala or Val residues, respectively. Mass spectrometry analyses identified four fengycin A and three fengycin B variants with fatty acid components containing 14-17 carbons. These results demonstrate that raw glycerol can be used as feedstock to produce fengycin, and additional work should focus on the optimization of process conditions to increase productivity.
- Published
- 2011
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14. Identification of alpha-beta unsaturated aldehydes as sources of toxicity to activated sludge biomass in polyester manufacturing wastewater.
- Author
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Caffaro-Filho RA, Wagner R, Umbuzeiro GA, Grossman MJ, and Durrant LR
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- Aldehydes chemistry, Bacteria drug effects, Bioreactors, Hydrogen-Ion Concentration, Industrial Waste, Textile Industry, Water Pollutants, Chemical chemistry, Water Pollutants, Chemical toxicity, Aldehydes toxicity, Biomass, Polyesters chemistry, Sewage, Waste Disposal, Fluid methods
- Abstract
Wastewater generated in industrial production processes are often contaminated by hazardous chemicals. Characterization by means of toxicity-directed analysis is useful for identifying which fractions of a waste stream possess the most toxicity. We applied this approach to evaluate toxic components of a polyester manufacturing wastewater. Using the reduction in oxygen uptake rate of activated sludge as an indicator of toxicity, it was determined that increasing the pH from 3 to 11 followed by air stripping significantly reduced the toxicity of the wastewater. Comparative headspace GC/MS analysis of wastewater at different pHs selected a group of Volatile Organic Compounds (VOCs) associated with the observed effect of air stripping at pH 11. Ten of these compounds were identified as alpha,beta unsaturated aldehydes (acrolein (2-propenal) congeners); these compounds are known to be toxic as well as mutagenic. Confirmation that these compounds were a cause of toxicity was achieved by demonstrating that removal of these compounds by air stripping significantly reduced the wastewater mutagenic potency in a Salmonella mutagenicity assay. Formation of these volatile compounds by base catalyzed aldol condensation at pH 11 may account for the effectiveness of air stripping in reducing toxicity. To date there is no record in the literature about the toxicity and presence of acrolein congeners in polyester manufacturing wastewater.
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- 2010
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15. Hereditary neuropathy with liability to pressure palsies: case report and discussion.
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Grossman MJ, Feinberg J, DiCarlo EF, Birchansky SB, and Wolfe SW
- Abstract
Hereditary neuropathy with liability to pressure palsies (HNPP) is an uncommon diagnosis that should be considered in patients with multiple compressive neuropathies. We present the case of a woman who presented with bilateral hand numbness and weakness. Electrodiagnostic testing revealed bilateral carpal tunnel syndrome, bilateral ulnar neuropathy at the elbow, left peroneal neuropathy at the fibular head, and a primarily demyelinating generalized sensorimotor neuropathy. Subsequent genetic testing identified a deletion at chromosome 17p11.2 to confirm the diagnosis of HNPP. Treatment of this largely self-limiting disease is controversial, and this patient suffered minimal disability with treatment including splinting and surgical releases.
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- 2007
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16. Detection of alkanes, alcohols, and aldehydes using bioluminescence.
- Author
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Minak-Bernero V, Bare RE, Haith CE, and Grossman MJ
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- 1-Octanol analysis, 1-Octanol metabolism, Alcohol Dehydrogenase genetics, Alcohol Dehydrogenase metabolism, Alcohols analysis, Alcohols metabolism, Aldehydes analysis, Aldehydes metabolism, Alkanes analysis, Alkanes metabolism, Cytochrome P-450 CYP4A genetics, Cytochrome P-450 CYP4A metabolism, Escherichia coli genetics, Escherichia coli metabolism, Fatty Alcohols analysis, Fatty Alcohols metabolism, Gene Expression, Genetic Vectors genetics, Luciferases, Bacterial genetics, Octanes analysis, Octanes metabolism, Organic Chemicals metabolism, Plasmids genetics, Polymerase Chain Reaction, Promoter Regions, Genetic genetics, Pseudomonas putida enzymology, Pseudomonas putida genetics, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Transformation, Bacterial, Vibrio enzymology, Vibrio genetics, Luciferases, Bacterial metabolism, Luminescent Measurements methods, Organic Chemicals analysis
- Abstract
We report a novel method for the rapid, sensitive, and quantitative detection of alkanes, alcohols, and aldehydes that relies on the reaction of bacterial luciferase with an aldehyde, resulting in the emission of light. Primary alcohols with corresponding aldehydes that are within the substrate range of the particular luciferase are detected after conversion to the aldehyde by an alcohol dehydrogenase. In addition, alkanes themselves may be detected by conversion to primary alcohols by an alkane hydroxylase, followed by conversion to the aldehyde by alcohol dehydrogenase. We developed a rapid bioluminescent method by genetically engineering the genes encoding bacterial luciferase, alcohol dehydrogenase, and alkane hydroxylase into a plasmid for simultaneous expression in an E. coli host cell line. Alkanes, alcohols, or aldehydes were detected within seconds, with sensitivity in the micromolar range, by measuring the resulting light emission with a microplate reader. We demonstrate the application of this method for the detection of alkanes, alcohols, and aldehydes and for the detection of alkane hydroxylase and alcohol dehydrogenase activity in vivo. This method is amenable to the high-throughput screening needs required for the identification of novel catalysts., (Copyright 2004 Wiley Periodicals, Inc.)
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- 2004
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17. Substrate preferences in biodesulfurization of diesel range fuels by Rhodococcus sp. strain ECRD-1.
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Prince RC and Grossman MJ
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- Biodegradation, Environmental, Gas Chromatography-Mass Spectrometry, Rhodococcus growth & development, Substrate Specificity, Thiophenes chemistry, Thiophenes metabolism, Gasoline, Rhodococcus metabolism, Sulfur metabolism
- Abstract
The range of sulfur compounds in fuel oil and the substrate range and preference of the biocatalytic system determine the maximum extent to which sulfur can be removed by biodesulfurization. We show that the biodesulfurization apparatus in Rhodococcus sp. strain ECRD-1 is able to attack all isomers of dibenzothiophene including those with at least four pendant carbons, with a slight preference for those substituted in the alpha-position. With somewhat less avidity, this apparatus is also able to attack substituted benzothiophenes with between two and seven pendant carbons. Some compounds containing sulfidic sulfur are also susceptible to desulfurization, although we have not yet been able to determine their molecular identities.
- Published
- 2003
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18. Comparison of the emulsion characteristics of Rhodococcus erythropolis and Escherichia coli SOXC-5 cells expressing biodesulfurization genes.
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Borole AP, Kaufman EN, Grossman MJ, Minak-Bernero V, Bare R, and Lee MK
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- Biodegradation, Environmental, Bioreactors, Catalysis, Escherichia coli genetics, Escherichia coli growth & development, Kinetics, Particle Size, Petroleum metabolism, Petroleum microbiology, Petroleum toxicity, Rhodococcus genetics, Rhodococcus growth & development, Surface Tension, Thiophenes metabolism, Emulsions metabolism, Escherichia coli metabolism, Rhodococcus metabolism, Sulfur metabolism
- Abstract
Biodesulfurization of fuel oils is a two-phase (oil/water) process which may offer an interesting alternative to conventional hydrodesulfurization due to the mild operating conditions and reaction specificity afforded by the biocatalyst. For biodesulfurization to realize commercial success, a variety of process considerations must be addressed including reaction rate, emulsion formation and breakage, biocatalyst recovery, and both gas and liquid mass transport. This study evaluates emulsion formation and breakage using two biocatalysts with differing hydrophobic characteristics. A Gram-positive (Rhodococcus erythropolis) biocatalyst, expressing the complete 4S desulfurization pathway, and a Gram-negative biocatalyst (Escherichia coli), expressing only the gene for conversion of dibenzothiophene (DBT) to DBT sulfone, are compared relative to their ability to convert DBT and the ease of phase separation as well as biocatalyst recovery following desulfurization.
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- 2002
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19. Deep desulfurization of extensively hydrodesulfurized middle distillate oil by Rhodococcus sp. strain ECRD-1.
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Grossman MJ, Lee MK, Prince RC, Minak-Bernero V, George GN, and Pickering IJ
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- Biodegradation, Environmental, Fuel Oils, Rhodococcus metabolism, Sulfur metabolism, Thiophenes metabolism
- Abstract
Dibenzothiophene (DBT), and in particular substituted DBTs, are resistant to hydrodesulfurization (HDS) and can persist in fuels even after aggressive HDS treatment. Treatment by Rhodococcus sp. strain ECRD-1 of a middle distillate oil whose sulfur content was virtually all substituted DBTs produced extensive desulfurization and a sulfur level of 56 ppm.
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- 2001
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20. Microbial desulfurization of a crude oil middle-distillate fraction: analysis of the extent of sulfur removal and the effect of removal on remaining sulfur.
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Grossman MJ, Lee MK, Prince RC, Garrett KK, George GN, and Pickering IJ
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- Biodegradation, Environmental, Chromatography, Gas, Flame Ionization, Luminescent Measurements, Molecular Structure, Spectrum Analysis, X-Rays, Fuel Oils analysis, Rhodococcus metabolism, Sulfur metabolism
- Abstract
Rhodococcus sp. strain ECRD-1 was evaluated for its ability to desulfurize a 232 to 343 degrees C middle-distillate (diesel range) fraction of Oregon basin (OB) crude oil. OB oil was provided as the sole source of sulfur in batch cultures, and the extent of desulfurization and the chemical fate of the residual sulfur in the oil after treatment were determined. Gas chromatography (GC), flame ionization detection, and GC sulfur chemiluminesce detection analysis were used to qualitatively evaluate the effect of Rhodococcus sp. strain ECRD-1 treatment on the hydrocarbon and sulfur content of the oil, respectively. Total sulfur was determined by combustion of samples and measurement of released sulfur dioxide by infrared absorption. Up to 30% of the total sulfur in the middle distillate cut was removed, and compounds across the entire boiling range of the oil were affected. Sulfur K-edge X-ray absorption-edge spectroscopy was used to examine the chemical state of the sulfur remaining in the treated OB oil. Approximately equal amounts of thiophenic and sulfidic sulfur compounds were removed by ECRD-1 treatment, and over 50% of the sulfur remaining after treatment was in an oxidized form. The presence of partially oxidized sulfur compounds indicates that these compounds were en route to desulfurization. Overall, more than two-thirds of the sulfur had been removed or oxidized by the microbial treatment.
- Published
- 1999
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21. Characterization of the basic replicon of Rhodococcus plasmid pSOX and development of a Rhodococcus-Escherichia coli shuttle vector.
- Author
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Denis-Larose C, Bergeron H, Labbé D, Greer CW, Hawari J, Grossman MJ, Sankey BM, and Lau PC
- Subjects
- Amino Acid Sequence, Bacillus subtilis genetics, Bacillus subtilis metabolism, Base Sequence, Deoxyribonucleases, Type II Site-Specific, Hexosyltransferases biosynthesis, Hexosyltransferases genetics, Molecular Sequence Data, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Restriction Mapping, Sequence Alignment, Sequence Homology, Amino Acid, Sucrose metabolism, Escherichia coli genetics, Genetic Vectors, Open Reading Frames, Plasmids biosynthesis, Plasmids chemistry, Plasmids genetics, Replicon, Rhodococcus genetics
- Abstract
The replication region of a 100-kb desulfurization plasmid (pSOX) from Rhodococcus sp. strain X309 was localized to a 4-kb KpnI fragment, and its sequence was determined. The amino acid sequence of one of the predicted open reading frames (ORFs) was related to the putative replication (Rep) protein sequences of the mycobacterial pLR7 family of plasmids. Three of the five predicted ORF products were identified by radiolabelling with the Escherichia coli T7 polymerase/promoter system. In E. coli, the Rep protein of pSOX was apparently synthesized in a shortened form, 21.3 kDa instead of the predicted 41.3 kDa, as a result of an internal initiation. This situation is reminescent of that for some bacterial Rep proteins. A shuttle plasmid was constructed with the pSOX origin, pBluescript II KS-, and the chloramphenicol resistance (Cmr) gene from pRF29. This new shuttle plasmid was used to demonstrate expression of the Bacillus subtilis sacB gene in a strain of Rhodococcus, rendering it sensitive to the presence of sucrose.
- Published
- 1998
- Full Text
- View/download PDF
22. Conservation of plasmid-encoded dibenzothiophene desulfurization genes in several rhodococci.
- Author
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Denis-Larose C, Labbé D, Bergeron H, Jones AM, Greer CW, al-Hawari J, Grossman MJ, Sankey BM, and Lau PC
- Subjects
- Chromosome Mapping, DNA Transposable Elements, Molecular Sequence Data, Polymerase Chain Reaction, RNA, Ribosomal, 16S genetics, Sequence Homology, Nucleic Acid, Oxygenases genetics, Plasmids genetics, Rhodococcus genetics, Rhodococcus metabolism, Thiophenes metabolism
- Abstract
The cloned sulfur oxidation (desulfurization) genes (sox) for dibenzothiophene (DBT) from the prototype Rhodococcus sp. strain IGTS8 were used in Southern hybridization and PCR experiments to establish the DNA relatedness in six new rhodococcal isolates which are capable of utilizing DBT as a sole sulfur source for growth. The ability of these strains to desulfurize appears to be an exclusive property of a 4-kb gene locus on a large plasmid of ca. 150 kb in IGTS8 and ca. 100 kb in the other strains. Besides a difference in plasmid profile, IGTS8 is distinguishable from the other strains in at least the copy number of the insertion sequence IS1166, which is associated with the sox genes.
- Published
- 1997
- Full Text
- View/download PDF
23. Sulfur-specific microbial desulfurization of sterically hindered analogs of dibenzothiophene.
- Author
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Lee MK, Senius JD, and Grossman MJ
- Abstract
Dibenzothiophenes (DBTs) bearing alkyl substitutions adjacent to the sulfur atom, such as 4,6-diethyldibenzothiophene (4,6-DEDBT), are referred to as sterically hindered with regard to access to the sulfur moiety. By using enrichment cultures with 4,6-DEDBT as the sole sulfur source, bacterial isolates which selectively remove sulfur from sterically hindered DBTs were obtained. The isolates were tentatively identified as Arthrobacter species. 4,6-DEDBT sulfone was shown to be an intermediate in the 4,6-DEDBT desulfurization pathway, and 2-hydroxy-3,3(prm1)-diethylbiphenyl (HDEBP) was identified as the sulfur-free end product.
- Published
- 1995
- Full Text
- View/download PDF
24. Bacterioferritin: a hemoprotein member of the ferritin family.
- Author
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Stiefel EI, Grossman MJ, Hinton SM, Minak-Bernero V, George GN, Prince RC, Bare RE, and Watt GD
- Subjects
- Amino Acid Sequence, Animals, Azotobacter vinelandii metabolism, Biological Evolution, Cytochrome b Group metabolism, Escherichia coli metabolism, Ferritins metabolism, Helicobacter pylori metabolism, Heme metabolism, Humans, Liver metabolism, Macrophages metabolism, Molecular Sequence Data, Sequence Homology, Amino Acid, Bacterial Proteins, Cytochrome b Group chemistry, Ferritins chemistry
- Published
- 1994
- Full Text
- View/download PDF
25. Novel iron-sulfur clusters.
- Author
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Prince RC and Grossman MJ
- Subjects
- Crystallography, Deoxyribonucleases, Type III Site-Specific chemistry, Iron-Sulfur Proteins chemistry, Nitrogenase chemistry, Iron chemistry, Sulfur chemistry
- Published
- 1993
- Full Text
- View/download PDF
26. Unification of the ferritin family of proteins.
- Author
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Grossman MJ, Hinton SM, Minak-Bernero V, Slaughter C, and Stiefel EI
- Subjects
- Amino Acid Sequence, Animals, Azotobacter vinelandii metabolism, Base Sequence, Databases, Factual, Horses, Humans, Models, Molecular, Molecular Sequence Data, Protein Conformation, Rats, Sequence Homology, Nucleic Acid, Azotobacter vinelandii genetics, Ferritins genetics, Genes, Bacterial
- Abstract
Ferritin is the iron-storage protein of eukaryotic organisms. The nucleotide sequence encoding Azotobacter vinelandii bacterioferritin, a hemoprotein, was determined. The deduced amino acid sequence reveals a high degree of identity with Escherichia coli bacterioferritin and a striking similarity to eukaryotic ferritins. Moreover, derivation of a global alignment shows that virtually all key residues specifying the unique structural motifs of eukaryotic ferritin are conserved or conservatively substituted in the A. vinelandii sequence. The alignment suggests specific methionine residues as heme-binding ligands in bacterioferritins. The overall sequence similarity with conservation of key structural residues implies that all ferritins form a unified family of proteins. The results implicate ferritins as proteins potentially common to all aerobic organisms and as such useful in taxonomic classification, evolutionary analysis, and environmental monitoring.
- Published
- 1992
- Full Text
- View/download PDF
27. Microbial populations and hydrocarbon biodegradation potentials in fertilized shoreline sediments affected by the T/V Exxon Valdez oil spill.
- Author
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Lindstrom JE, Prince RC, Clark JC, Grossman MJ, Yeager TR, Braddock JF, and Brown EJ
- Subjects
- Alaska, Biodegradation, Environmental, Minerals, Ships, Environmental Monitoring, Fertilizers, Hydrocarbons, Petroleum, Soil Microbiology, Water Pollutants, Chemical
- Abstract
The effort of clean up the T/V Exxon Valdez oil spill in Prince William Sound, Alaska, included the use of fertilizers to accelerate natural microbial degradation of stranded oil. A program to monitor various environmental parameters associated with this technique took place during the summer of 1990. Microbiological assays for numbers of heterotrophic and oil-degrading microbes and their hydrocarbon mineralization potentials were performed in support of this program. Fertilizer addition resulted in higher hexadecane and phenanthrene mineralization potentials on treated plots than on untreated reference plots. Microbial numbers in treated and reference surface sediments were not significantly different immediately after the first nutrient application in May 1990. However, subsurface sediments from treated plots had higher numbers of hydrocarbon degraders than did reference sediments shortly after treatment. The second application of fertilizer, later in summer, resulted in surface and subsurface increases in numbers of hydrocarbon degraders with respect to reference sediments at two of the three study sites. Elevated mineralization potentials, coupled with increased numbers of hydrocarbon degraders, indicated that natural hydrocarbon biodegradation was enhanced. However, these microbiological measurements alone are not sufficient to determine in situ rates of crude oil biodegradation.
- Published
- 1991
- Full Text
- View/download PDF
28. Purification and DNA binding properties of the blaI gene product, repressor for the beta-lactamase gene, blaP, of Bacillus licheniformis.
- Author
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Grossman MJ and Lampen JO
- Subjects
- Base Sequence, Binding Sites, DNA metabolism, Gene Expression Regulation, Genetic Vectors, Repressor Proteins genetics, Repressor Proteins metabolism, Bacillus genetics, Genes, Bacterial, Repressor Proteins isolation & purification, Transcription Factors isolation & purification, beta-Lactamases genetics
- Abstract
The location of the repressor gene, blaI, for the beta-lactamase gene blaP of Bacillus licheniformis 749, on the 5' side of blaP, was confirmed by sequencing the bla region of the constitutive mutant 749/C. An amber stop codon, likely to result in a nonfunctional truncated repressor, was found at codon 32 of the 128 codon blaI open reading frame (ORF) located 5' to blaP. In order to study the DNA binding activity of the repressor, the structural gene for blaI, from strain 749, with its ribosome binding site was expressed using a two plasmid T7 RNA polymerase/promotor system (S. Tabor and C. C. Richardson. Proc. Natl. Acad. Sci. 82, 1074-1078 (1985). Heat induction of this system in Escherichia coli K38 resulted in the production of BlaI as 5-10% of the soluble cell protein. Repressor protein was then purified by ammonium sulfate fractionation and cation exchange chromatography. The sequence of the N-terminal 28 amino acid residues was determined and was as predicted from the DNA. Binding of BlaI to DNA was detected by the slower migration of protein DNA complexes during polyacrylamide gel electrophoresis. BlaI was shown to selectively bind DNA fragments carrying the promoter regions of blaI and blaP.
- Published
- 1987
- Full Text
- View/download PDF
29. Perihepatic adhesions in infertility patients with prior pelvic inflammatory disease.
- Author
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Grossman MJ, Rosenfeld DL, and Bronson RA
- Subjects
- Female, Humans, Infertility, Female etiology, Laparotomy, Pelvic Inflammatory Disease pathology, Infertility, Female pathology, Liver pathology, Pelvic Inflammatory Disease complications
- Abstract
At the time of laparoscopic examination performed for the evaluation of infertility, 55 patients with hydrosalpinges were identified. Perihepatic "violin-string" adhesions suggestive of a prior episode of Fitz-Hugh-Curtis syndrome were seen in 15 of these patients. Of 13 patients with proximal tubal obstruction and 7 patients with periadnexal adhesions and patent fallopian tubes, none of whom had surgical procedures or endometriosis, none were noted to have perihepatic adhesions. No patients with perihepatic adhesions had symptoms referable to the liver.
- Published
- 1981
30. Interaction of BlaI, the repressor for the beta-lactamase gene of Bacillus licheniformis, with the blaP and blaI promoters.
- Author
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Grossman MJ, Curran IH, and Lampen JO
- Subjects
- Bacillus enzymology, Base Sequence, Binding, Competitive, DNA-Directed RNA Polymerases metabolism, Deoxyribonuclease I metabolism, Immunosorbent Techniques, Molecular Sequence Data, Plasmids, Protein Biosynthesis drug effects, Repressor Proteins genetics, Repressor Proteins pharmacology, Transcription, Genetic, Bacillus genetics, DNA, Bacterial metabolism, Promoter Regions, Genetic, Repressor Proteins metabolism, Transcription Factors metabolism, beta-Lactamases genetics
- Abstract
BlaI repressor for the beta-lactamase gene (blaP) of Bacillus licheniformis 749, was shown to repress expression of blaP and of the repressor gene (blaI), using the purified protein in a DNA-directed in vitro translation assay. Binding of BlaI to the promoter regions of blaP and blaI was examined by equilibrium and competitive binding assays. BlaI binds to the blaP promoter with an equal or only slightly higher affinity than to the blaI promoter. DNase I footprinting shows that BlaI binds directly to the blaP and blaI promoters, such that RNA polymerase binding and/or transcript elongation would be blocked.
- Published
- 1989
- Full Text
- View/download PDF
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