1,320 results on '"Grondin P"'
Search Results
2. The first catalog of candidate white dwarf-main sequence binaries in open star clusters: A new window into common envelope evolution
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Grondin, Steffani M., Drout, Maria R., Nordhaus, Jason, Muirhead, Philip S., Speagle, Joshua S., and Chornock, Ryan
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
Close binary systems are the progenitors to both Type Ia supernovae and the compact object mergers that can be detected via gravitational waves. To achieve a binary with a small radial separation, it is believed that the system likely undergoes common envelope (CE) evolution. Despite its importance, CE evolution may be one of the largest uncertainties in binary evolution due to a combination of computational challenges and a lack of observed benchmarks where both the post-CE and pre-CE conditions are known. Identifying post-CE systems in star clusters can partially circumvent this second issue by providing an independent age constraint on the system. For the first time, we conduct a systematic search for white dwarf (WD) and main-sequence (MS) binary systems in 299 Milky Way open star clusters. Coupling Gaia DR3 photometry and kinematics with multi-band photometry from Pan-STARRS1 and 2MASS, we apply a machine learning based approach and find 52 high-probability candidates in 38 open clusters. For a subset of our systems, we present follow-up spectroscopy from the Gemini and Lick Observatories and archival light curves from TESS, Kepler/K2 and the Zwicky Transient Facility. Examples of M-dwarfs with hot companions are spectroscopically observed, along with regular system variability. While the kinematics of our candidates are consistent with their host clusters, some systems have spatial positions offset relative to their hosts, potentially indicative of natal kicks. Ultimately, this catalogue is a first step to obtaining a set of observational benchmarks to better link post-CE systems to their pre-CE progenitors., Comment: 35 pages, 18 figures. Submitted to The Astrophysical Journal on July 5, 2024; Accepted for publication on August 15, 2024
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- 2024
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3. Unsupervised Improved MVDR Beamforming for Sound Enhancement
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Kealey, Jacob, Hershey, John, and Grondin, François
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Computer Science - Sound ,Electrical Engineering and Systems Science - Audio and Speech Processing - Abstract
Neural networks have recently become the dominant approach to sound separation. Their good performance relies on large datasets of isolated recordings. For speech and music, isolated single channel data are readily available; however the same does not hold in the multi-channel case, and with most other sound classes. Multi-channel methods have the potential to outperform single channel approaches as they can exploit both spatial and spectral features, but the lack of training data remains a challenge. We propose unsupervised improved minimum variation distortionless response (UIMVDR), which enables multi-channel separation to leverage in-the-wild single-channel data through unsupervised training and beamforming. Results show that UIMVDR generalizes well and improves separation performance compared to supervised models, particularly in cases with limited supervised data. By using data available online, it also reduces the effort required to gather data for multi-channel approaches., Comment: Proceedings of INTERSPEECH 2024
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- 2024
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4. Influence of musical training on temporal productions when using fast and slow counting paces
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Grondin, Simon, Demers, Antoine, Rioux, Pier-Alexandre, Thibault, Nicola, and Mioni, Giovanna
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- 2024
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5. Interplay between developmental cues and rhizosphere signals from mycorrhizal fungi shape root anatomy, impacting crop productivity
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Grondin, Alexandre, Li, Meng, Bhosale, Rahul, Sawers, Ruairidh, and Schneider, Hannah M.
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- 2024
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6. Examination of the Aggregate Scoring Method in a Judgment Concordance Test
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Deschênes, Marie-France, Dionne, Éric, Dorion, Michelle, and Grondin, Julie
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The use of the aggregate scoring method for scoring concordance tests requires the weighting of test items to be derived from the performance of a group of experts who take the test under the same conditions as the examinees. However, the average score of experts constituting the reference panel remains a critical issue in the use of these tests. This study aims to examine the distribution of panelists' scores on the judgment concordance test (JCT) using the aggregate scoring method. A test composed of 32 items was developed and completed by 14 experts. The mean scores of the experts were calculated based on whether their choices of response categories for the 32 JCT items were included or excluded. Descriptive statistics were conducted. The mean scores of the experts showed a difference of 5.76%, depending on the approach used. The approach that excludes the experts' response category choices was found to be more penalizing (76.16%±8.9) than the method including their own choices (81.92%±8.1). It is recommended that researchers make their computational approaches explicit in addition to outlining the distribution of expert results retained for the purpose of determining scores in the concordance tests. Further research is required to refine our understanding of the quality of score-setting in this type of test.
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- 2023
7. Unveiling extended gamma-ray emission around HESS J1813-178
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Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Baktash, A., Martins, V. Barbosa, Barnard, J., Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., de Lavergne, M. de Bony, Borowska, J., Bouyahiaoui, M., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Caroff, S., Casanova, S., Cecil, R., Celic, J., Cerruti, M., Chambery, P., Chand, T., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., Mbarubucyeye, J. Damascene, Djannati-Ataï, A., Dmytriiev, A., Doroshenko, V., Einecke, S., Ernenwein, J. -P., Feijen, K., Filipovic, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Gallant, Y. A., Ghafourizadeh, S., Giavitt, G., Glawion, D., Glicenstein, J. F., Goswami, P., Grolleron, G., Grondin, M. -H., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Katarzyński, K., Khatoon, R., Khélifi, B., Klepser, S., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Kundu, A., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Mackey, J., Malyshev, D., Marandon, V., Marinos, P., Martí-Devesa, G., Marx, R., Mehta, A., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Murach, T., de Naurois, M., Niemiec, J., Noel, A. Priyana, O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Prokhorov, D. A., Pühlhofer, G., Punch, M., Quirrenbach, A., Regeard, M., Reichherzer, P., Reimer, A., Reimer, O., Ren, H., Renaud, M., Reville, B., Rieger, F., Roellinghoff, G., Rudak, B., Sahakian, V., Salzmann, H., Sasaki, M., Schüssler, F., Schutte, H. M., Shapopi, J. N. S., Specovius, A., Spencer, S., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Terrier, R., Tluczykont, M., Tsuji, N., Unbehaun, T., van Eldik, C., Vecchi, M., Veh, J., Venter, C., Vink, J., Wach, T., Wagner, S. J., Wierzcholska, A., Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zouari, S., and Żywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
HESS J1813$-$178 is a very-high-energy $\gamma$-ray source spatially coincident with the young and energetic pulsar PSR J1813$-$1749 and thought to be associated with its pulsar wind nebula (PWN). Recently, evidence for extended high-energy emission in the vicinity of the pulsar has been revealed in the Fermi Large Area Telescope (LAT) data. This motivates revisiting the HESS J1813$-$178 region, taking advantage of improved analysis methods and an extended data set. Using data taken by the High Energy Stereoscopic System (H.E.S.S.) experiment and the Fermi-LAT, we aim to describe the $\gamma$-ray emission in the region with a consistent model, to provide insights into its origin. We performed a likelihood-based analysis on 32 hours of H.E.S.S. data and 12 years of Fermi-LAT data and fit a spectro-morphological model to the combined datasets. These results allowed us to develop a physical model for the origin of the observed $\gamma$-ray emission in the region. In addition to the compact very-high-energy $\gamma$-ray emission centered on the pulsar, we find a significant yet previously undetected component along the Galactic plane. With Fermi-LAT data, we confirm extended high-energy emission consistent with the position and elongation of the extended emission observed with H.E.S.S. These results establish a consistent description of the emission in the region from GeV energies to several tens of TeV. This study suggests that HESS J1813$-$178 is associated with a $\gamma$-ray PWN powered by PSR J1813$-$1749. A possible origin of the extended emission component is inverse Compton emission from electrons and positrons that have escaped the confines of the pulsar and form a halo around the PWN., Comment: 13+5 pages, 13+11 figures. Accepted for publication in A&A. Corresponding authors: T.Wach, A.Mitchell, V.Joshi, P.Chamb\'ery
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- 2024
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8. Spectrum and extension of the inverse-Compton emission of the Crab Nebula from a combined Fermi-LAT and H.E.S.S. analysis
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Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Baktash, A., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., de Lavergne, M. de Bony, Borowska, J., Bradascio, F., Breuhaus, M., Brose, R., Brown, A., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Bylund, T., Caroff, S., Casanova, S., Cecil, R., Celic, J., Cerruti, M., Chambery, P., Chand, T., Chandra, S., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., Cristofari, P., Devin, J., Djannati-Ataï, A., Djuvsland, J., Dmytriiev, A., Einecke, S., Ernenwein, J. -P., Fegan, S., Feijen, K., Filipović, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Gallant, Y. A., Giavitto, G., Glawion, D., Glicenstein, J. F., Glombitza, J., Goswami, P., Grolleron, G., Grondin, M. -H., Haerer, L., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Jamrozy, M., Jankowsky, F., Joshi, V., Kasai, E., Katarzyński, K., Khatoon, R., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Kundu, A., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Luashvili, A., Mackey, J., Malyshev, D., Marandon, V., Marinos, P., Martí-Devesa, G., Marx, R., Mehta, A., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Murach, T., de Naurois, M., Niemiec, J., O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Prokhorov, D. A., Pühlhofer, G., Punch, M., Quirrenbach, A., Regeard, M., Reichherzer, P., Reimer, A., Reimer, O., Ren, H., Renaud, M., Reville, B., Rieger, F., Roellinghoff, G., Rudak, B., Sahakian, V., Salzmann, H., Sasaki, M., Schüssler, F., Schutte, H. M., Shapopi, J. N. S., Specovius, A., Spencer, S., Stawarz, Ł., Steenkamp, R., Steinmassl, S., Steppa, C., Streil, K., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Terrier, R., Tluczykont, M., Tsuji, N., Unbehaun, T., van Eldik, C., Vecchi, M., Veh, J., Venter, C., Vink, J., Wach, T., Wagner, S. J., Wierzcholska, A., Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zouari, S., Żywucka, N., and Harding, A.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
The Crab Nebula is a unique laboratory for studying the acceleration of electrons and positrons through their non-thermal radiation. Observations of very-high-energy $\gamma$ rays from the Crab Nebula have provided important constraints for modelling its broadband emission. We present the first fully self-consistent analysis of the Crab Nebula's $\gamma$-ray emission between 1 GeV and $\sim$100 TeV, that is, over five orders of magnitude in energy. Using the open-source software package Gammapy, we combined 11.4 yr of data from the Fermi Large Area Telescope and 80 h of High Energy Stereoscopic System (H.E.S.S.) data at the event level and provide a measurement of the spatial extension of the nebula and its energy spectrum. We find evidence for a shrinking of the nebula with increasing $\gamma$-ray energy. Furthermore, we fitted several phenomenological models to the measured data, finding that none of them can fully describe the spatial extension and the spectral energy distribution at the same time. Especially the extension measured at TeV energies appears too large when compared to the X-ray emission. Our measurements probe the structure of the magnetic field between the pulsar wind termination shock and the dust torus, and we conclude that the magnetic field strength decreases with increasing distance from the pulsar. We complement our study with a careful assessment of systematic uncertainties., Comment: 18+6 pages, 15+2 figures. Accepted for publication in A&A. Corresponding authors: M. Meyer, L. Mohrmann, T. Unbehaun. v2: after A&A language editing
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- 2024
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9. A Case Study from the Overexpression of OsTZF5, Encoding a CCCH Tandem Zinc Finger Protein, in Rice Plants Across Nineteen Yield Trials.
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Grondin, Alexandre, Natividad, Mignon, Ogata, Takuya, Jan, Asad, Gaudin, Amélie, Trijatmiko, Kurniawan, Liwanag, Evelyn, Maruyama, Kyonoshin, Fujita, Yasunari, Yamaguchi-Shinozaki, Kazuko, Nakashima, Kazuo, Slamet-Loedin, Inez, and Henry, Amelia
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Drought ,Rice ,Transgene expression ,Transgenic ,Yield - Abstract
BACKGROUND: Development of transgenic rice overexpressing transcription factors involved in drought response has been previously reported to confer drought tolerance and therefore represents a means of crop improvement. We transformed lowland rice IR64 with OsTZF5, encoding a CCCH-tandem zinc finger protein, under the control of the rice LIP9 stress-inducible promoter and compared the drought response of transgenic lines and nulls to IR64 in successive screenhouse paddy and field trials up to the T6 generation. RESULTS: Compared to the well-watered conditions, the level of drought stress across experiments varied from a minimum of - 25 to - 75 kPa at a soil depth of 30 cm which reduced biomass by 30-55% and grain yield by 1-92%, presenting a range of drought severities. OsTZF5 transgenic lines showed high yield advantage under drought over IR64 in early generations, which was related to shorter time to flowering, lower shoot biomass and higher harvest index. However, the increases in values for yield and related traits in the transgenics became smaller over successive generations despite continued detection of drought-induced transgene expression as conferred by the LIP9 promoter. The decreased advantage of the transgenics over generations tended to coincide with increased levels of homozygosity. Background cleaning of the transgenic lines as well as introgression of the transgene into an IR64 line containing major-effect drought yield QTLs, which were evaluated starting at the BC3F1 and BC2F3 generation, respectively, did not result in consistently increased yield under drought as compared to the respective checks. CONCLUSIONS: Although we cannot conclusively explain the genetic factors behind the loss of yield advantage of the transgenics under drought across generations, our results help in distinguishing among potential drought tolerance mechanisms related to effectiveness of the transgenics, since early flowering and harvest index most closely reflected the levels of yield advantage in the transgenics across generations while reduced biomass did not.
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- 2024
10. On the Ziv-Merhav theorem beyond Markovianity II: leveraging the thermodynamic formalism
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Barnfield, Nicholas, Grondin, Raphaël, Pozzoli, Gaia, and Raquépas, Renaud
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Mathematics - Probability ,Computer Science - Information Theory ,Mathematics - Dynamical Systems ,94A17, 37M25, 60F15, 37D35 - Abstract
We prove asymptotic results for a modification of the cross-entropy estimator originally introduced by Ziv and Merhav in the Markovian setting in 1993. Our results concern a more general class of decoupled measures on shift spaces over a finite alphabet and in particular imply strong asymptotic consistency of the modified estimator for all pairs of functions of stationary, irreducible, finite-state Markov chains satisfying a mild decay condition. Our approach is based on the study of a rescaled cumulant-generating function called the cross-entropic pressure, importing to information theory some techniques from the study of large deviations within the thermodynamic formalism.
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- 2023
11. A catalogue of Galactic GEMS: Globular cluster Extra-tidal Mock Stars
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Grondin, Steffani M., Webb, Jeremy J., Lane, James M. M., Speagle, Joshua S., and Leigh, Nathan W. C.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - Solar and Stellar Astrophysics - Abstract
This work presents the Globular cluster Extra-tidal Mock Star (GEMS) catalogue of extra-tidal stars and binaries created via three-body dynamical encounters in globular cluster cores. Using the particle-spray code Corespray, we sample N=50,000 extra-tidal stars and escaped recoil binaries for 159 Galactic globular clusters. Sky positions, kinematics, stellar properties and escape information are provided for all simulated stars. Stellar orbits are integrated in seven different static and time-varying Milky Way gravitational potential models where the structure of the disc, perturbations from the Large Magellanic Cloud and the mass and sphericity of the Milky Way's dark matter halo are all investigated. We find that the action coordinates of the mock extra-tidal stars are largely Galactic model independent, where minor offsets and broadening of the distributions between models are likely due to interactions with substructure. Importantly, we also report the first evidence for stellar stream contamination by globular cluster core stars and binaries for clusters with pericentre radii larger than five kiloparsecs. Finally, we provide a quantitative tool that uses action coordinates to match field stars to host clusters with probabilities. Ultimately, combining data from the GEMS catalogue with information of observed stars will allow for association of extra-tidal field stars with any Galactic globular cluster; a requisite tool for understanding population-level dynamics and evolution of clusters in the Milky Way., Comment: 23 pages, 12 figures, 1 table. Accepted for publication in Monthly Notices of the Royal Astronomical Society. For the associated GEMS catalogue, please visit https://zenodo.org/records/8436703
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- 2023
12. Discovery of a Radiation Component from the Vela Pulsar Reaching 20 Teraelectronvolts
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Collaboration, The H. E. S. S., Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., de Lavergne, M. de Bony, Borowska, J., Bradascio, F., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Bylund, T., Cangemi, F., Caroff, S., Casanova, S., Celic, J., Cerruti, M., Chand, T., Chandra, S., Chen, A., Chibueze, O., Cotter, G., Mbarubucyeye, J. Damascene, Djannati-Ataï, A., Dmytriiev, A., Egberts, K., Ernenwein, J. -P., Feijen, K., Fiasson, A., de Clairfontaine, G. Fichet, Fontaine, G., Füßling, M., Funk, S., Gabici, S., Gallant, Y. A., Ghafourizadeh, S., Giavitto, G., Giunti, L., Glawion, D., Glicenstein, J. F., Goswami, P., Grolleron, G., Grondin, M. -H., Haerer, L., Haupt, M., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Khélifi, B., Klepser, S., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Marinos, P., Martí-Devesa, G., Marx, R., Maurin, G., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Murach, T., Nakashima, K., de Naurois, M., Niemiec, J., Noel, A. Priyana, OBrien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Pita, S., Prokhorov, D. A., Prokoph, H., Pühlhofer, G., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Rieger, F., Rowell, G., Rudak, B., Ruiz-Velasco, E., Sahakian, V., Sailer, S., Salzmann, H., Sanchez, D. A., Santangelo, A., Sasaki, M., Schüssler, F., Schwanke, U., Shapopi, J. N. S., Sinha, A., Sol, H., Specovius, A., Spencer, S., Spir-Jacob, M., Stawarz, L., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Tavernier, T., Terrier, R., Thorpe-Morgan, C., Tluczykont, M., Tsirou, M., Tsuji, N., van Eldik, C., Vecchi, M., Veh, J., Venter, C., Vink, J., Wagner, S. J., Werner, F., White, R., Wierzcholska, A., Wong, Yu Wun, Yassin, H., Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zhu, S. J., Zouari, S., Żywucka, N., Zanin, R., Kerr, M., Johnston, S., Shannon, R. M., and Smith, D. A.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
Gamma-ray observations have established energetic isolated pulsars as outstanding particle accelerators and antimatter factories in the Galaxy. There is, however, no consensus regarding the acceleration mechanisms and the radiative processes at play, nor the locations where these take place. The spectra of all observed gamma-ray pulsars to date show strong cutoffs or a break above energies of a few gigaelectronvolt (GeV). Using the H.E.S.S. array of Cherenkov telescopes, we discovered a novel radiation component emerging beyond this generic GeV cutoff in the Vela pulsar's broadband spectrum. The extension of gamma-ray pulsation energies up to at least 20 teraelectronvolts (TeV) shows that Vela pulsar can accelerate particles to Lorentz factors higher than $4\times10^7$. This is an order of magnitude larger than in the case of the Crab pulsar, the only other pulsar detected in the TeV energy range. Our results challenge the state-of-the-art models for high-energy emission of pulsars while providing a new probe, i.e. the energetic multi-TeV component, for constraining the acceleration and emission processes in their extreme energy limit., Comment: 38 pages, 6 figures. This preprint has not undergone peer review or any post-submission improvements or corrections. The Version of Record of this article is published in Nature Astronomy, Nat Astron (2023), and is available online at https://doi.org/10.1038/s41550-023-02052-3
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- 2023
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13. On the Ziv-Merhav theorem beyond Markovianity
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Barnfield, Nicholas, Grondin, Raphaël, Pozzoli, Gaia, and Raquépas, Renaud
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Computer Science - Information Theory ,Mathematics - Dynamical Systems ,Mathematics - Probability ,94A17, 37M25, 37B10 - Abstract
We generalize to a broader class of decoupled measures a result of Ziv and Merhav on universal estimation of the specific cross (or relative) entropy for a pair of multi-level Markov measures. The result covers pairs of suitably regular g-measures and pairs of equilibrium measures arising from the small space of interactions in mathematical statistical mechanics.
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- 2023
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14. Assessing research culture and capacity amongst faculty at a North American chiropractic institution: an explanatory mixed methods study
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Weis, Carol Ann, Howarth, Samuel J., Grondin, Diane, Southerst, Danielle, Fillery, Mark, D’Arcy, Janet, Bradaric-Baus, Christine, and Mior, Silvano
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- 2024
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15. Insights into the cotranscriptional and translational control mechanisms of the Escherichia coli tbpA thiamin pyrophosphate riboswitch
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Grondin, Jonathan P., Geffroy, Mélanie, Simoneau-Roy, Maxime, Chauvier, Adrien, Turcotte, Pierre, St-Pierre, Patrick, Dubé, Audrey, Moreau, Julie, Massé, Eric, Penedo, J. Carlos, and Lafontaine, Daniel A.
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- 2024
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16. Analyses of the impact of laterality on performances in the National Hockey League based on players’ position and origin
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Grondin, Simon, Rioux, Pier-Alexandre, and Fortin-Guichard, Daniel
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- 2024
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17. Assessing the treatment response of lateral elbow tendinopathy using time-dependent ultrasonography, Doppler imaging, and elastography
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Tobaly, David, Tétreault, Patrice, Cloutier, Guy, Choinière, Manon, Grondin, Philippe, Freire, Véronique, Julien, Anne-Sophie, and Bureau, Nathalie J.
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- 2024
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18. Comprehensive mass spectrometric metabolomic profiling of a chemically diverse collection of plants of the Celastraceae family
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Quiros-Guerrero, Luis-Manuel, Allard, Pierre-Marie, Nothias, Louis-Felix, David, Bruno, Grondin, Antonio, and Wolfender, Jean-Luc
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- 2024
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19. Neuro-ophthalmological changes in healthy females exposed to a 5-day dry immersion: a pilot study
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Kermorgant, Marc, Chedmail, Thibault, Varenne, Fanny, Bareille, Marie-Pierre, Beck, Arnaud, Billette de Villemeur, Rebecca, Fournié, Pierre, Grondin, Lisa, Hélissen, Ophélie, Membrives, Charlotte, Nasr, Nathalie, Pavy-Le Traon, Anne, and Soler, Vincent
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- 2024
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20. Millennial-scale variations in Arctic sea ice are recorded in sedimentary ancient DNA of the microalga Polarella glacialis
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Harðardóttir, Sara, Haile, James S., Ray, Jessica Louise, Limoges, Audrey, Van Nieuwenhove, Nicolas, Lalande, Catherine, Grondin, Pierre-Luc, Jackson, Rebecca, Skaar, Katrine Sandnes, Heikkilä, Maija, Berge, Jørgen, Lundholm, Nina, Massé, Guillaume, Rysgaard, Søren, Seidenkrantz, Marit-Solveig, De Schepper, Stijn, Lorenzen, Eline D., Lovejoy, Connie, and Ribeiro, Sofia
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- 2024
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21. Assessing research culture and capacity amongst faculty at a North American chiropractic institution: an explanatory mixed methods study
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Carol Ann Weis, Samuel J. Howarth, Diane Grondin, Danielle Southerst, Mark Fillery, Janet D’Arcy, Christine Bradaric-Baus, and Silvano Mior
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Focus groups ,Chiropractic ,Capacity building ,Evidence-based medicine ,Faculty ,Mentors ,RZ201-275 ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background Research enables a profession to establish its cultural authority, validate its professional roles and ensure ongoing improvement in the quality of its academic programming. Despite the clear importance of research, a mature research culture has eluded the chiropractic profession. A fostering institutional culture that enables, values, and supports research activity is essential to building research capacity. Our study aimed to collect information about the existing research capacity and culture at the Canadian Memorial Chiropractic College (CMCC) and explore the views, attitudes and experiences of faculty members regarding research. Methods We conducted a sequential explanatory mixed methods study with quantitative priority between April and July, 2023. Quantitative data were collected using the Research Capacity and Culture (RCC) tool. Survey results guided the qualitative data collected from four faculty focus groups with varying levels of research experience. Quantitative data were analyzed using descriptive statistics by domain and stratified by research education and workload. The qualitative data were thematically analyzed and then integrated with the quantitative results to provide deeper meaning to the results. Results The faculty survey response rate was 42% (59/144). Attributes at the organization or department level were consistently rated as either moderate or high; however, research skills at an individual level were more variable and influenced by factors such as research workload and highest research-related academic qualification. Qualitative focus group data were categorized under four themes: institutional factors, resource allocation, career pathways and personal factors. Lower scores for survey items related to mentorship, research planning and ensuring faculty research career pathways, as well as the identified workload and time-related barriers (e.g., other work roles and desire for work/life balance) for engaging in research were supported by each of the four themes. Research motivators included keeping the brain stimulated, developing skills and increasing job satisfaction. Conclusion The quantitative and qualitative information in this study provides a baseline evaluation for RCC and identifies key factors impacting RCC at the CMCC. This information is critical for planning, developing, implementing, and evaluating future interventions to enhance research capacity. Ultimately, these efforts are aimed at maturing the research culture of the chiropractic profession.
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- 2024
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22. Insights into the cotranscriptional and translational control mechanisms of the Escherichia coli tbpA thiamin pyrophosphate riboswitch
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Jonathan P. Grondin, Mélanie Geffroy, Maxime Simoneau-Roy, Adrien Chauvier, Pierre Turcotte, Patrick St-Pierre, Audrey Dubé, Julie Moreau, Eric Massé, J. Carlos Penedo, and Daniel A. Lafontaine
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Biology (General) ,QH301-705.5 - Abstract
Abstract Riboswitches regulate gene expression by modulating their structure upon metabolite binding. These RNA orchestrate several layers of regulation to achieve genetic control. Although Escherichia coli riboswitches modulate translation initiation, several cases have been reported where riboswitches also modulate mRNA levels. Here, we characterize the regulation mechanisms of the thiamin pyrophosphate (TPP) tbpA riboswitch in E. coli. Our results indicate that the tbpA riboswitch modulates both levels of translation and transcription and that TPP sensing is achieved more efficiently cotranscriptionally than post-transcriptionally. The preference for cotranscriptional binding is also observed when monitoring the TPP-dependent inhibition of translation initiation. Using single-molecule approaches, we observe that the aptamer domain freely fluctuates between two main structures involved in TPP recognition. Our results suggest that translation initiation is controlled through the ligand-dependent stabilization of the riboswitch structure. This study demonstrates that riboswitch cotranscriptional sensing is the primary determinant in controlling translation and mRNA levels.
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- 2024
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23. The dominant mechanism(s) for populating the outskirts of star clusters with neutron star binaries
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Leigh, Nathan W. C., Ye, Claire S., Grondin, Steffani M., Fragione, Giacomo, Webb, Jeremy J., and Heinke, Craig O.
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Astrophysics - Astrophysics of Galaxies ,Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Solar and Stellar Astrophysics - Abstract
It has been argued that heavy binaries composed of neutron stars (NSs) and millisecond pulsars (MSPs) can end up in the outskirts of star clusters via an interaction with a massive black hole (BH) binary expelling them from the core. We argue here, however, that this mechanism will rarely account for such observed objects. Only for primary masses $\lesssim$ 100 M$_{\odot}$ and a narrow range of orbital separations should a BH-BH binary be both dynamically hard and produce a sufficiently low recoil velocity to retain the NS binary in the cluster. Hence, BH binaries are in general likely to eject NSs from clusters. We explore several alternative mechanisms that would cause NS/MSP binaries to be observed in the outskirts of their host clusters after a Hubble time. The most likely mechanism is a three-body interaction involving the NS/MSP binary and a normal star. We compare to Monte Carlo simulations of cluster evolution for the globular clusters NGC 6752 and 47 Tuc, and show that the models not only confirm that normal three-body interactions involving all stellar-mass objects are the dominant mechanism for putting NS/MSP binaries into the cluster outskirts, they also reproduce the observed NS/MSP binary radial distributions without needing to invoke the presence of a massive BH binary. Higher central densities and an episode of core-collapse can broaden the radial distributions of NSs/MSPs and NS/MSP binaries due to three-body interactions, making these clusters more likely to host NSs in the cluster outskirts., Comment: 13 pages, 7 figures, 2 tables, submitted to MNRAS
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- 2023
24. Efficient Face Detection with Audio-Based Region Proposals for Human-Robot Interactions
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Aris, William and Grondin, François
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Electrical Engineering and Systems Science - Audio and Speech Processing ,Computer Science - Sound ,Electrical Engineering and Systems Science - Image and Video Processing - Abstract
Efficient face detection is critical to provide natural human-robot interactions. However, computer vision tends to involve a large computational load due to the amount of data (i.e. pixels) that needs to be processed in a short amount of time. This is undesirable on robotics platforms where multiple processes need to run in parallel and where the processing power is limited by portability constraints. Existing solutions often involve reducing image quality which can negatively impact processing. The literature also reports methods to generate regions of interest in images from pixel data. Although it is a promising idea, these methods often involve heavy vision algorithms. In this paper, we evaluate how audio can be used to generate regions of interest in optical images to reduce the number of pixels to process with computer vision. Thereby, we propose a unique attention mechanism to localize a speech source and evaluate its impact on an existing face detection algorithm. Our results show that the attention mechanism reduces the computational load and offers an interesting trade-off between speed and accuracy. The proposed pipeline is flexible and can be easily adapted to other applications such as robot surveillance, video conferences or smart glasses.
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- 2023
25. PlumberNet: Fixing interference leakage after GEV beamforming
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Grondin, François and Rascón, Caleb
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Electrical Engineering and Systems Science - Audio and Speech Processing ,Computer Science - Sound - Abstract
Spatial filters can exploit deep-learning-based speech enhancement models to increase their reliability in scenarios with multiple speech sources scenarios. To further improve speech quality, it is common to perform postfiltering on the estimated target speech obtained with spatial filtering. In this work, Generalized Eigenvalue (GEV) beamforming is employed to provide the leakage estimation, along with the estimation of the target speech, to be later used for postfiltering. This improves the enhancement performance over a postfilter that uses the target speech and a reference microphone signal. This work also demonstrates that the spatial covariance matrices (SCMs) can be accurately estimated from the direction of arrival (DoA) of the target and a discriminative selection amongst the pairwise estimated time-frequency masks.
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- 2023
26. Constraints on the intergalactic magnetic field using Fermi-LAT and H.E.S.S. blazar observations
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S., H. E. S., Collaborations, Fermi-LAT, Aharonian, F., Aschersleben, J., Backes, M., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bi, B., Bouyahiaoui, M., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Bylund, T., Caroff, S., Casanova, S., Celic, J., Cerruti, M., Chand, T., Chandra, S., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., de Bony, M., Egberts, K., Ernenwein, J. -P., de Clairfontaine, G. Fichet, Filipovic, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Ghafourizadeh, S., Giavitto, G., Glawion, D., Glicenstein, J. F., Goswami, P., Grondin, M. -H., Haerer, L., Holch, T. L., Holler, M., Horns, D., Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzynński, K., Khatoon, R., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Martí-Devesa, G., Marx, R., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Murach, T., Nakashima, K., Niemiec, J., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Panny, S., Panter, M., Parsons, R. D., Peron, G., Prokhorov, D. A., Prokoph, H., Pühlhofer, G., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Reville, B., Rieger, F., Rowell, G., Rudak, B., Ruiz-Velasco, E., Sahakian, V., Sanchez, D. A., Sasaki, M., Schüussler, F., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Sol, H., Spencer, S., Steinmassl, S., Suzuki, H., Takahashi, T., Tanaka, T., Taylor, A. M., Terrier, R., Thorpe-Morgan, C., Tsirou, M., Tsuji, N., Uchiyama, Y., van Eldik, C., Veh, J., Venter, C., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zouari, S., and Zywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
Magnetic fields in galaxies and galaxy clusters are believed to be the result of the amplification of intergalactic seed fields during the formation of large-scale structures in the universe. However, the origin, strength, and morphology of this intergalactic magnetic field (IGMF) remain unknown. Lower limits on (or indirect detection of) the IGMF can be obtained from observations of high-energy gamma rays from distant blazars. Gamma rays interact with the extragalactic background light to produce electron-positron pairs, which can subsequently initiate electromagnetic cascades. The $\gamma$-ray signature of the cascade depends on the IGMF since it deflects the pairs. Here we report on a new search for this cascade emission using a combined data set from the Fermi Large Area Telescope and the High Energy Stereoscopic System. Using state-of-the-art Monte Carlo predictions for the cascade signal, our results place a lower limit on the IGMF of $B > 7.1\times10^{-16}$ G for a coherence length of 1 Mpc even when blazar duty cycles as short as 10 yr are assumed. This improves on previous lower limits by a factor of 2. For longer duty cycles of $10^4$ ($10^7$) yr, IGMF strengths below $1.8\times10^{-14}$ G ($3.9\times10^{-14}$ G) are excluded, which rules out specific models for IGMF generation in the early universe., Comment: 20 pages, 7 figures, 4 tables. Accepted for publication in ApJ Letters. Auxiliary data is provided in electronic format at https://zenodo.org/record/8014311
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- 2023
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27. Constraining the cosmic-ray pressure in the inner Virgo Cluster using H.E.S.S. observations of M 87
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Collaboration, H. E. S. S., Aharonian, F., Benkhali, F. Ait, Arcaro, C., Aschersleben, J., Backes, M., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., Borowska, J., Bradascio, F., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Bylund, T., Caroff, S., Casanova, S., Cecil, R., Celic, J., Cerruti, M., Chand, T., Chandra, S., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., Mbarubucyeye, J. Damascene, Djannati-Ataï, A., Egberts, K., Ernenwein, J. -P., de Clairfontaine, G. Fichet, Filipovic, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Ghafourizadeh, S., Giavitto, G., Glawion, D., Glicenstein, J. F., Goswami, P., Grolleron, G., Grondin, M. -H., Haerer, L., Haupt, M., Hermann, G., Hinton, J. A., Holch, T. L., Horns, D., Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Khatoon, R., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Marinos, P., Martí-Devesa, G., Marx, R., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Nakashima, K., de Naurois, M., Niemiec, J., Noel, A. Priyana, O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Panny, S., Panter, M., Parsons, R. D., Peron, G., Pita, S., Prokhorov, D. A., Prokoph, H., Pühlhofer, G., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Rieger, F., Rowell, G., Rudak, B., Velasco, E. Ruiz, Sahakian, V., Salzmann, H., Sanchez, D. A., Santangelo, A., Sasaki, M., Schäfer, J., Schüssler, F., Schwanke, U., Shapopi, J. N. S., Sol, H., Specovius, A., Spencer, S., Stawarz, Ł., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Taylor, A. M., Terrier, R., Tsirou, M., Tsuji, N., Uchiyama, Y., van Eldik, C., van Soelen, B., Vecchi, M., Veh, J., Venter, C., Vink, J., Wach, T., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zouari, S., and Żywucka, N.
- Subjects
Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Astrophysics of Galaxies - Abstract
The origin of the gamma-ray emission from M87 is currently a matter of debate. This work aims to localize the VHE (100 GeV-100 TeV) gamma-ray emission from M87 and probe a potential extended hadronic emission component in the inner Virgo Cluster. The search for a steady and extended gamma-ray signal around M87 can constrain the cosmic-ray energy density and the pressure exerted by the cosmic rays onto the intra-cluster medium, and allow us to investigate the role of the cosmic rays in the active galactic nucleus feedback as a heating mechanism in the Virgo Cluster. H.E.S.S. telescopes are sensitive to VHE gamma rays and have been utilized to observe M87 since 2004. We utilized a Bayesian block analysis to identify M87 emission states with H.E.S.S. observations from 2004 until 2021, dividing them into low, intermediate, and high states. Because of the causality argument, an extended ($\gtrsim$kpc) signal is allowed only in steady emission states. Hence, we fitted the morphology of the 120h low state data and found no significant gamma-ray extension. Therefore, we derived for the low state an upper limit of 58"(corresponding to $\approx$4.6kpc) in the extension of a single-component morphological model described by a rotationally symmetric 2D Gaussian model at 99.7% confidence level. Our results exclude the radio lobes ($\approx$30 kpc) as the principal component of the VHE gamma-ray emission from the low state of M87. The gamma-ray emission is compatible with a single emission region at the radio core of M87. These results, with the help of two multiple-component models, constrain the maximum cosmic-ray to thermal pressure ratio $X_{{CR,max.}}$$\lesssim$$0.32$ and the total energy in cosmic-ray protons (CRp) to $U_{CR}$$\lesssim$5$\times10^{58}$ erg in the inner 20kpc of the Virgo Cluster for an assumed CRp power-law distribution in momentum with spectral index $\alpha_{p}$=2.1., Comment: 15 pages, 7 figures. Accepted for publication in A&A. Corresponding authors: Victor Barbosa Martins, Stefan Ohm, Cornelia Arcaro, Natalia \.Zywucka, Mathieu de Naurois
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- 2023
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28. Detection of extended gamma-ray emission around the Geminga pulsar with H.E.S.S
- Author
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Collaboration, H. E. S. S., Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., Borowska, J., Bouyahiaoui, M., Bradascio, F., Brose, R., Brun, F., Bruno, B., Bulik, T., Scheidlin, C. Burger, Cangemi, F., Caroff, S., Casanova, S., Celic, J., Cerruti, M., Chambery, P., Chand, T., Chandra, S., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., Mbarubucyeye, J. Damascene, Devin, J., Djannati-Ataï, A., Dmytriiev, A., Egberts, K., Einecke, S., Ernenwein, J. P., Feijen, K., de Clairfontaine, G. Fichet, Filipovic, M., Fontaine, G., Füssling, M., Funk, S., Gabici, S., Gallant, Y. A., Ghafourizadeh, S., Giavitto, G., Giunti, L., Glawion, D., Glicenstein, J. F., Goswami, P., Grolleron, G., Grondin, M. -H., Haerer, L., Haupt, M., Hermann, G., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Marinos, P., Martí-Devesa, G., Marx, R., Maurin, G., Meintjes, P. J., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Nakashima, K., de Naurois, M., Niemiec, J., Noel, A. Priyana, O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Prokhorov, D. A., Pühlhofer, G., Quirrenbach, A., Reimer, A., Reimer, O., Renaud, M., Reville, B., Rieger, F., Rowell, G., Rudak, B., Ricarte, H. Rueda, Ruiz-Velasco, E., Sahakian, V., Salzmann, H., Santangelo, A., Sasaki, M., Schüssler, F., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Sinha, A., Sol, H., Specovius, A., Spencer, S., Stawarz, Ł., Steinmassl, S., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Tavernier, T., Taylor, A. M., Terrier, R., Thorpe-Morgan, C., Tsirou, M., Tsuji, N., Vecchi, M., Venter, C., Vink, J., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zouari, S., and Żywucka, N.
- Subjects
Astrophysics - High Energy Astrophysical Phenomena - Abstract
Geminga is an enigmatic radio-quiet gamma-ray pulsar located at a mere 250 pc distance from Earth. Extended very-high-energy gamma-ray emission around the pulsar was discovered by Milagro and later confirmed by HAWC, which are both water Cherenkov detector-based experiments. However, evidence for the Geminga pulsar wind nebula in gamma rays has long evaded detection by imaging atmospheric Cherenkov telescopes (IACTs) despite targeted observations. The detection of gamma-ray emission on angular scales > 2 deg poses a considerable challenge for the background estimation in IACT data analysis. With recent developments in understanding the complementary background estimation techniques of water Cherenkov and atmospheric Cherenkov instruments, the H.E.S.S. IACT array can now confirm the detection of highly extended gamma-ray emission around the Geminga pulsar with a radius of at least 3 deg in the energy range 0.5-40 TeV. We find no indications for statistically significant asymmetries or energy-dependent morphology. A flux normalisation of $(2.8\pm0.7)\times10^{-12}$ cm$^{-2}$s$^{-1}$TeV$^{-1}$ at 1 TeV is obtained within a 1 deg radius region around the pulsar. To investigate the particle transport within the halo of energetic leptons around the pulsar, we fitted an electron diffusion model to the data. The normalisation of the diffusion coefficient obtained of $D_0 = 7.6^{+1.5}_{-1.2} \times 10^{27}$ cm$^2$s$^{-1}$, at an electron energy of 100 TeV, is compatible with values previously reported for the pulsar halo around Geminga, which is considerably below the Galactic average., Comment: 16 pages, 15 figures, 7 tables. Accepted for publication in Astronomy & Astrophysics
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- 2023
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29. Analyses of the impact of laterality on performances in the National Hockey League based on players’ position and origin
- Author
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Simon Grondin, Pier-Alexandre Rioux, and Daniel Fortin-Guichard
- Subjects
Medicine ,Science - Abstract
Abstract This study addresses the question of the lateral preference of the National Hockey League players. The shooting preference, left or right, was analysed as a function of the origin of four groups of players that are from the USA, Canada, Europe, or Russia. The analysis reveals that the players from the USA are more likely to shoot right than players from other countries. Also, compared to defense players from other groups, defense players from the USA have a higher number of shots per game and a higher goal-to-assist ratio. The study also shows that for wingers shooting left, those playing on the right wing have more goals or points per game than those playing on the left wing; and that European forward players have a better differential (+/−) than American and Canadian forward players. The study reveals the influence of the players’ origin on the preference in a bimanual asymmetric task and the impact of this preference on ice hockey performances.
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- 2024
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30. Sensitivity of the Cherenkov Telescope Array to spectral signatures of hadronic PeVatrons with application to Galactic Supernova Remnants
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Consortium, The Cherenkov Telescope Array, Acero, F., Acharyya, A., Adam, R., Aguasca-Cabot, A., Agudo, I., Aguirre-Santaella, A., Alfaro, J., Aloisio, R., Crespo, N. Álvarez, Batista, R. Alves, Amati, L., Amato, E., Ambrosi, G., Angüner, E. O., Aramo, C., Arcaro, C., Armstrong, T., Asano, K., Ascasibar, Y., Aschersleben, J., Backes, M., Baktash, A., Balazs, C., Balbo, M., Ballet, J., Larriva, A. Baquero, Martins, V. Barbosa, de Almeida, U. Barres, Barrio, J. A., Bastieri, D., Baxter, J. R., Tjus, J. Becker, Benbow, W., Bernardos-Martín, M. I., Bernete, J., Berti, A., Bertucci, B., Beshley, V., Bhattacharjee, P., Bhattacharyya, S., Biland, A., Bissaldi, E., Biteau, J., Blanch, O., Bordas, P., Bottacini, E., Bregeon, J., Brose, R., Bucciantini, N., Bulgarelli, A., Capasso, M., Dolcetta, R. A. Capuzzo, Caraveo, P., Cardillo, M., Carosi, R., Casanova, S., Cascone, E., Cassol, F., Catalani, F., Cerruti, M., Chadwick, P., Chaty, S., Chen, A., Chernyakova, M., Chiavassa, A., Chudoba, J., Coimbra-Araujo, C., Conforti, V., Contreras, J. L., Costa, A., Costantini, H., Cristofari, P., Crocker, R., D'Amico, G., D'Ammando, F., De Angelis, A., De Caprio, V., Pino, E. M. de Gouveia Dal, Wilhelmi, E. de Ona, de Souza, V., Delgado, C., della Volpe, D., Depaoli, D., Di Girolamo, T., Di Pierro, F., Di Tria, R., Di Venere, L., Diebold, S., Djuvsland, J. I., Donini, A., Doro, M., Anjos, R. d. C. Dos, Dwarkadas, V. V., Einecke, S., Elsässer, D., Emery, G., Evoli, C., Falceta-Goncalves, D., Fedorova, E., Fegan, S., Ferrand, G., Fiandrini, E., Filipovic, M., Fioretti, V., Fiori, M., Foffano, L., Fontaine, G., Fukami, S., Galanti, G., Galaz, G., Gammaldi, V., Gasbarra, C., Ghalumyan, A., Ghirlanda, G., Giarrusso, M., Giavitto, G., Giglietto, N., Giordano, F., Giroletti, M., Giuliani, A., Giunti, L., Godinovic, N., Coelho, J. Goulart, Gréaux, L., Green, D., Grondin, M-H., Gueta, O., Gunji, S., Hassan, T., Heller, M., Hernández-Cadena, S., Hinton, J., Hnatyk, B., Hnatyk, R., Hoffmann, D., Hofmann, W., Holder, J., Horan, D., Horvath, P., Hrabovsky, M., Hrupec, D., Inada, T., Incardona, F., Inoue, S., Ishio, K., Jamrozy, M., Janecek, P., Martínez, I. Jiménez, Jin, W., Jung-Richardt, I., Jurysek, J., Kaaret, P., Karas, V., Katz, U., Kerszberg, D., Khélifi, B., Kieda, D. B., Kissmann, R., Kleiner, T., Kluge, G., Kluzniak, W., Knödlseder, J., Kobayashi, Y., Kohri, K., Komin, N., Kornecki, P., Kubo, H., La Palombara, N., Láinez, M., Lamastra, A., Lapington, J., Lemoine-Goumard, M., Lenain, J. -P., Leone, F., Leto, G., Leuschner, F., Lindfors, E., Liodakis, I., Lohse, T., Lombardi, S., Longo, F., López-Coto, R., López-Moya, M., López-Oramas, A., Loporchio, S., Luque-Escamilla, P. L., Macias, O., Mackey, J., Majumdar, P., Mandat, D., Manganaro, M., Manicò, G., Marconi, M., Martí, J., Martínez, G., Martinez, M., Martinez, O., Mello, A. J. T. S., Menchiari, S., Meyer, D. M. -A., Micanovic, S., Miceli, D., Miceli, M., Michalowski, J., Miener, T., Miranda, J. M., Mitchell, A., Mode, B., Moderski, R., Mohrmann, L., Molina, E., Montaruli, T., Morcuende, D., Morlino, G., Morselli, A., Mosè, M., Moulin, E., Mukherjee, R., Munari, K., Murach, T., Nagai, A., Nagataki, S., Nemmen, R., Niemiec, J., Nieto, D., Rosillo, M. Nievas, Nikolajuk, M., Nishijima, K., Noda, K., Novosyadlyj, B., Nozaki, S., Ohishi, M., Ohm, S., Ohtani, Y., Okumura, A., Olmi, B., Ong, R. A., Orienti, M., Orito, R., Orlandini, M., Orlando, E., Orlando, S., Ostrowski, M., Oya, I., Pantaleo, F. R., Paredes, J. M., Patricelli, B., Pecimotika, M., Peresano, M., Pérez-Romero, J., Persic, M., Petruk, O., Piano, G., Pietropaolo, E., Pirola, G., Pittori, C., Pohl, M., Ponti, G., Prandini, E., Principe, G., Priyadarshi, C., Pueschel, E., Pühlhofer, G., Pumo, M. L., Quirrenbach, A., Rando, R., Razzaque, S., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Reposeur, T., Ribó, M., Richtler, T., Rico, J., Rieger, F., Rigoselli, M., Riitano, L., Rizi, V., Roache, E., Romano, P., Romeo, G., Rosado, J., Rowell, G., Rudak, B., Sadeh, I., Safi-Harb, S., Saha, L., Sailer, S., Sánchez-Conde, M., Sarkar, S., Satalecka, K., Saturni, F. G., Scherer, A., Schovánek, P., Schussler, F., Schwanke, U., Scuderi, S., Seglar-Arroyo, M., Sergijenko, O., Servillat, M., Shang, R-Y., Sharma, P., Siejkowski, H., Sliusar, V., Słowikowska, A., Sol, H., Specovius, A., Spencer, S. T., Spengler, G., Stamerra, A., Stanič, S., Starecki, T., Starling, R., Stolarczyk, T., Pereira, L. A. Stuani, Suda, Y., Suomijarvi, T., Sushch, I., Tajima, H., Tam, P-H. T., Tanaka, S. J., Tavecchio, F., Testa, V., Tian, W., Tibaldo, L., Torres, D. F., Tothill, N., Vallage, B., Vallania, P., van Eldik, C., van Scherpenberg, J., Vandenbroucke, J., Acosta, M. Vazquez, Vecchi, M., Vercellone, S., Verna, G., Viana, A., Vignatti, J., Vitale, V., Vodeb, V., Vorobiov, S., Vuillaume, T., Wagner, S. J., Walter, R., White, M., Wierzcholska, A., Will, M., Williams, D., Yang, L., Yoshida, T., Yoshikoshi, T., Zaharijas, G., Zampieri, L., Zavrtanik, D., Zavrtanik, M., Zhdanov, V. I., and Živec, M.
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Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
The local Cosmic Ray (CR) energy spectrum exhibits a spectral softening at energies around 3~PeV. Sources which are capable of accelerating hadrons to such energies are called hadronic PeVatrons. However, hadronic PeVatrons have not yet been firmly identified within the Galaxy. Several source classes, including Galactic Supernova Remnants (SNRs), have been proposed as PeVatron candidates. The potential to search for hadronic PeVatrons with the Cherenkov Telescope Array (CTA) is assessed. The focus is on the usage of very high energy $\gamma$-ray spectral signatures for the identification of PeVatrons. Assuming that SNRs can accelerate CRs up to knee energies, the number of Galactic SNRs which can be identified as PeVatrons with CTA is estimated within a model for the evolution of SNRs. Additionally, the potential of a follow-up observation strategy under moonlight conditions for PeVatron searches is investigated. Statistical methods for the identification of PeVatrons are introduced, and realistic Monte--Carlo simulations of the response of the CTA observatory to the emission spectra from hadronic PeVatrons are performed. Based on simulations of a simplified model for the evolution for SNRs, the detection of a $\gamma$-ray signal from in average 9 Galactic PeVatron SNRs is expected to result from the scan of the Galactic plane with CTA after 10 hours of exposure. CTA is also shown to have excellent potential to confirm these sources as PeVatrons in deep observations with $\mathcal{O}(100)$ hours of exposure per source., Comment: 34 pages, 16 figures, Accepted for publication in Astroparticle Physics
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- 2023
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31. Search for the evaporation of primordial black holes with H.E.S.S
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collaboration, H. E. S. S., Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Boettcher, M., Backes, M., Martins, V. Barbosa, Batzo, R., Becherini, Y., Berge, D., Bi, B., Boisson, C., Bolmont, J., de Lavergne, M. de Bony, Borowska, J., Bradascio, F., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Caro, S., Casanova, S., Celic, J., Cerruti, M., Chand, T., Chen, A., Chibueze, O., Cotter, G., Mbarubucyeye, J. Damascene, Djannati-Atai, A., Egberts, K., van Eldik, C., Ernenwein, J. -P., Fussling, M., Fiasson, A., de Clairfontaine, G. Fichet, Fontaine, G., Gabici, S., Ghafourizadeh, S., Giavitto, G., Glawion, D., Glicenstein, J. F., Grolleron, G., Grondin, M. -H., Haerer, L., Haupt, M., Hinton, J. A., Hofmann, W., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzynski, K., Khelifi, B., Klepser, S., Kluzniak, W., Komin, Nu., Kosack, K., Kostunin, D., Holch, T. L., Lang, R. G., Stum, S. Le, Leitl, F., Lemiere, A., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marinos, P., Marti-Devesa, G., Marx, R., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Nakashima, K., de Naurois, M., Niemiec, J., O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Puehlhofer, G., Panny, S., Panter, M., Parsons, R. D., Peron, G., Noel, A. Priyana, Prokhorov, D. A., Prokoph, H., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, O., Rieger, F., Rowell, G., Rudak, B., Ricarte, H. Rueda, Sahakian, V., Salzmann, H., Sanchez, D. A., Santangelo, A., Sasaki, M., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Sol, H., Specovius, A., Spencer, S., Stawarz, L., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Tavernier, T., Thorpe-Morgan, C., Tsuji, N., Uchiyama, Y., Vecchi, M., Veh, J., Venter, C., Vink, J., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zouari, S., and Zywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
Primordial Black Holes (PBHs) are hypothetical black holes predicted to have been formed from density fluctuations in the early Universe. PBHs with an initial mass around $10^{14}-10^{15}$g are expected to end their evaporation at present times in a burst of particles and very-high-energy (VHE) gamma rays. Those gamma rays may be detectable by the High Energy Stereoscopic System (H.E.S.S.), an array of imaging atmospheric Cherenkov telescopes. This paper reports on the search for evaporation bursts of VHE gamma rays with H.E.S.S., ranging from 10 to 120 seconds, as expected from the final stage of PBH evaporation and using a total of 4816 hours of observations. The most constraining upper limit on the burst rate of local PBHs is $2000$ pc$^{-3}$ yr$^{-1}$ for a burst interval of 120 seconds, at the 95\% confidence level. The implication of these measurements for PBH dark matter are also discussed., Comment: Accepted for publication in JCAP, corresponding authors: F.Brun, J-F. Glicenstein, V. Marandon, T. Tavernier
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- 2023
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32. H.E.S.S. follow-up observations of GRB221009A
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Collaboration, H. E. S. S., Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Baktash, A., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlöhr, K., Bi, B., Böttcher, M., Boisson, C., Bolmont, J., de Lavergne, M. de Bony, Borowska, J., Bouyahiaoui, M., Bradascio, F., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Caroff, S., Casanova, S., Celic, J., Cerruti, M., Chand, T., Chandra, S., Chen, A., Chibueze, J., Chibueze, O., Cotter, G., Dai, S., Mbarubucyeye, J. Damascene, Devin, J., Djannati-Ataï, A., Dmytriiev, A., Doroshenko, V., Egberts, K., Einecke, S., Ernenwein, J. -P., Fegan, S., de Clairfontaine, G. Fichet, Filipovic, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Ghafourizadeh, S., Giavitto, G., Glawion, D., Glicenstein, J. F., Goswami, P., Grolleron, G., Hinton, M. -H. Grondin J. A., Holch, T. L., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Khatoon, R., Khélifi, B., Kluźniak, W., Komin, Nu., Konno, R., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. P., Leuschner, F., Lohse, T., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Martí-Devesa, G., Marx, R., Meyer, M., Mitchell, A., Mohrmann, L., Montanari, A., Moulin, E., Murach, T., Nakashima, K., de Naurois, M., Niemiec, J., Noel, A. Priyana, O'Brien, P., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Prokhorov, D. A., Prokoph, H., Pühlhofer, G., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Ren, H., Renaud, M., Reville, B., Rieger, F., Rowell, G., Rudak, B., Ruiz-Velasco, E., Sahakian, V., Salzmann, H., Santangelo, A., Sasaki, M., Schäfer, J., Schüssler, F., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Specovius, A., Spencer, S., Stawarz, Ł., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Terrier, R., Tsuji, N., Uchiyama, Y., Vecchi, M., Venter, C., Vink, J., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zhu, S. J., and Żywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
GRB221009A is the brightest gamma-ray burst ever detected. To probe the very-high-energy (VHE, $>$\!100 GeV) emission, the High Energy Stereoscopic System (H.E.S.S.) began observations 53 hours after the triggering event, when the brightness of the moonlight no longer precluded observations. We derive differential and integral upper limits using H.E.S.S. data from the third, fourth, and ninth nights after the initial GRB detection, after applying atmospheric corrections. The combined observations yield an integral energy flux upper limit of $\Phi_\mathrm{UL}^{95\%} = 9.7 \times 10^{-12}~\mathrm{erg\,cm^{-2}\,s^{-1}}$ above $E_\mathrm{thr} = 650$ GeV. The constraints derived from the H.E.S.S. observations complement the available multiwavelength data. The radio to X-ray data are consistent with synchrotron emission from a single electron population, with the peak in the SED occurring above the X-ray band. Compared to the VHE-bright GRB190829A, the upper limits for GRB221009A imply a smaller gamma-ray to X-ray flux ratio in the afterglow. Even in the absence of a detection, the H.E.S.S. upper limits thus contribute to the multiwavelength picture of GRB221009A, effectively ruling out an IC dominated scenario., Comment: 10 pages, 4 figures. Accepted for publication in APJL. Corresponding authors: J. Damascene Mbarubucyeye, H. Ashkar, S. J. Zhu, B. Reville, F. Sch\"ussler
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- 2023
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33. Real-time Audio Video Enhancement \\with a Microphone Array and Headphones
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Kealey, Jacob, Gosselin, Anthony, Deshaies-Samson, Étienne, Cardinal, Francis, Ducharme-Turcotte, Félix, Bergeron, Olivier, Rioux-Joyal, Amélie, Bélec, Jérémy, and Grondin, François
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Electrical Engineering and Systems Science - Audio and Speech Processing - Abstract
This paper presents a complete hardware and software pipeline for real-time speech enhancement in noisy and reverberant conditions. The device consists of a microphone array and a camera mounted on eyeglasses, connected to an embedded system that enhances speech and plays back the audio in headphones, with a latency of maximum 120 msec. The proposed approach relies on face detection, tracking and verification to enhance the speech of a target speaker using a beamformer and a postfiltering neural network. Results demonstrate the feasibility of the approach, and opens the door to the exploration and validation of a wide range of beamformer and speech enhancement methods for real-time speech enhancement., Comment: Submitted to IROS 2023
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- 2023
34. Ego-noise reduction of a mobile robot using noise spatial covariance matrix learning and minimum variance distortionless response
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Lagacé, Pierre-Olivier, Ferland, François, and Grondin, François
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Electrical Engineering and Systems Science - Audio and Speech Processing - Abstract
The performance of speech and events recognition systems significantly improved recently thanks to deep learning methods. However, some of these tasks remain challenging when algorithms are deployed on robots due to the unseen mechanical noise and electrical interference generated by their actuators while training the neural networks. Ego-noise reduction as a preprocessing step therefore can help solve this issue when using pre-trained speech and event recognition algorithms on robots. In this paper, we propose a new method to reduce ego-noise using only a microphone array and less than two minute of noise recordings. Using Principal Component Analysis (PCA), the best covariance matrix candidate is selected from a dictionary created online during calibration and used with the Minimum Variance Distortionless Response (MVDR) beamformer. Results show that the proposed method runs in real-time, improves the signal-to-distortion ratio (SDR) by up to 10 dB, decreases the word error rate (WER) by 55\% in some cases and increases the Average Precision (AP) of event detection by up to 0.2., Comment: Submitted to IROS 2023
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- 2023
35. HESS J1809$-$193: a halo of escaped electrons around a pulsar wind nebula?
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Collaboration, H. E. S. S., Aharonian, F., Benkhali, F. Ait, Aschersleben, J., Ashkar, H., Backes, M., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Böttcher, M., Boisson, C., Bolmont, J., Borowska, J., Bouyahiaoui, M., Bradascio, F., Breuhaus, M., Brose, R., Brun, F., Bruno, B., Bulik, T., Burger-Scheidlin, C., Bylund, T., Caroff, S., Casanova, S., Celic, J., Cerruti, M., Chambery, P., Chand, T., Chen, A., Chibueze, J., Chibueze, O., Mbarubucyeye, J. Damascene, Djannati-Ataï, A., Dmytriiev, A., Einecke, S., Ernenwein, J. -P., Feijen, K., Filipovic, M., Fontaine, G., Füßling, M., Funk, S., Gabici, S., Gallant, Y. A., Ghafourizadeh, S., Giavitto, G., Giunti, L., Glawion, D., Goswami, P., Grolleron, G., Grondin, M. -H., Haerer, L., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lang, R. G., Stum, S. Le, Leitl, F., Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Marinos, P., Martí-Devesa, G., Marx, R., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Nakashima, K., de Naurois, M., Niemiec, J., Noel, A. Priyana, Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Prokhorov, D. A., Pühlhofer, G., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Reville, B., Rieger, F., Rowell, G., Rudak, B., Sahakian, V., Santangelo, A., Sasaki, M., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Sol, H., Specovius, A., Spencer, S., Stawarz, Ł., Steenkamp, R., Steinmassl, S., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Terrier, R., Thorpe-Morgan, C., Tsirou, M., Tsuji, N., Uchiyama, Y., van Eldik, C., Vecchi, M., Veh, J., Venter, C., Vink, J., Wach, T., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zouari, S., and Żywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
Context. HESS J1809$-$193 is an unassociated very-high-energy $\gamma$-ray source located on the Galactic plane. While it has been connected to the nebula of the energetic pulsar PSR J1809$-$1917, supernova remnants and molecular clouds present in the vicinity also constitute possible associations. Recently, the detection of $\gamma$-ray emission up to energies of $\sim$100 TeV with the HAWC observatory has led to renewed interest in HESS J1809$-$193. Aims. We aim to understand the origin of the $\gamma$-ray emission of HESS J1809$-$193. Methods. We analysed 93.2 h of data taken on HESS J1809$-$193 above 0.27 TeV with the High Energy Stereoscopic System (H.E.S.S.), using a multi-component, three-dimensional likelihood analysis. In addition, we provide a new analysis of 12.5 yr of Fermi-LAT data above 1 GeV within the region of HESS J1809$-$193. The obtained results are interpreted in a time-dependent modelling framework. Results. For the first time, we were able to resolve the emission detected with H.E.S.S. into two components: an extended component that exhibits a spectral cut-off at $\sim$13 TeV, and a compact component that is located close to PSR J1809$-$1917 and shows no clear spectral cut-off. The Fermi-LAT analysis also revealed extended $\gamma$-ray emission, on scales similar to that of the extended H.E.S.S. component. Conclusions. Our modelling indicates that based on its spectrum and spatial extent, the extended H.E.S.S. component is likely caused by inverse Compton emission from old electrons that form a halo around the pulsar wind nebula. The compact component could be connected to either the pulsar wind nebula or the supernova remnant and molecular clouds. Due to its comparatively steep spectrum, modelling the Fermi-LAT emission together with the H.E.S.S. components is not straightforward. (abridged), Comment: 14 pages, 10 figures. Accepted for publication in A&A. Corresponding authors: Vikas Joshi, Lars Mohrmann
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- 2023
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36. Anticipated impacts in habitat of diagnostic species of potential natural vegetations due to climate change at the ecotone between temperate and boreal forests
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Aurélie Chalumeau, Yves Bergeron, Mathieu Bouchard, Pierre Grondin, Marie-Claude Lambert, and Catherine Périé
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Climate change ,Climate analogs ,Potential natural vegetation ,Diagnostic species ,Habitat suitability ,Ecology ,QH540-549.5 - Abstract
Potential natural vegetations are crucial for forest research, management, and monitoring, especially considering their evolution amidst climate change. In Quebec (Canada), these vegetations were defined in the 2000s but haven't been updated since then. Originally, stability in their composition and dynamics relied on unchanged climate, soil characteristics, and disturbance regimes. However, in the southwestern part of Quebec forests, we have enhanced the description of potential natural vegetations using diagnostic species, based on their indicator values and relative abundance. This improvement prompts a reevaluation of these vegetations, particularly at the transition between temperate and boreal forests, considering climate change. Our study, using tree habitat suitability models, reveals that even under a moderately warming scenario (2041–2070 RCP 4.5 W m−2), diagnostic coniferous and boreal hardwood species face habitat suitability declines but the current classification remains adequate. However, a more severe warming scenario (2071–2100 RCP 8.5 W m−2) results in significant habitat unsuitability for these diagnostic species, questioning the relevance of the current classification at the ecotone. Given the crucial tool of potential natural vegetations in forest management, updating their classification becomes imperative to guide forestry practices' adaptation to climate change.
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- 2024
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37. Tree Detection and Diameter Estimation Based on Deep Learning
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Grondin, Vincent, Fortin, Jean-Michel, Pomerleau, François, and Giguère, Philippe
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Computer Science - Computer Vision and Pattern Recognition - Abstract
Tree perception is an essential building block toward autonomous forestry operations. Current developments generally consider input data from lidar sensors to solve forest navigation, tree detection and diameter estimation problems. Whereas cameras paired with deep learning algorithms usually address species classification or forest anomaly detection. In either of these cases, data unavailability and forest diversity restrain deep learning developments for autonomous systems. So, we propose two densely annotated image datasets - 43k synthetic, 100 real - for bounding box, segmentation mask and keypoint detections to assess the potential of vision-based methods. Deep neural network models trained on our datasets achieve a precision of 90.4% for tree detection, 87.2% for tree segmentation, and centimeter accurate keypoint estimations. We measure our models' generalizability when testing it on other forest datasets, and their scalability with different dataset sizes and architectural improvements. Overall, the experimental results offer promising avenues toward autonomous tree felling operations and other applied forestry problems. The datasets and pre-trained models in this article are publicly available on \href{https://github.com/norlab-ulaval/PercepTreeV1}{GitHub} (https://github.com/norlab-ulaval/PercepTreeV1).
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- 2022
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38. Training Deep Learning Algorithms on Synthetic Forest Images for Tree Detection
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Grondin, Vincent, Pomerleau, François, and Giguère, Philippe
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence - Abstract
Vision-based segmentation in forested environments is a key functionality for autonomous forestry operations such as tree felling and forwarding. Deep learning algorithms demonstrate promising results to perform visual tasks such as object detection. However, the supervised learning process of these algorithms requires annotations from a large diversity of images. In this work, we propose to use simulated forest environments to automatically generate 43 k realistic synthetic images with pixel-level annotations, and use it to train deep learning algorithms for tree detection. This allows us to address the following questions: i) what kind of performance should we expect from deep learning in harsh synthetic forest environments, ii) which annotations are the most important for training, and iii) what modality should be used between RGB and depth. We also report the promising transfer learning capability of features learned on our synthetic dataset by directly predicting bounding box, segmentation masks and keypoints on real images. Code available on GitHub (https://github.com/norlab-ulaval/PercepTreeV1)., Comment: Work presented at ICRA 2022 Workshop in Innovation in Forestry Robotics: Research and Industry Adoption
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- 2022
39. Crop traits and production under drought
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Vadez, Vincent, Grondin, Alexandre, Chenu, Karine, Henry, Amelia, Laplaze, Laurent, Millet, Emilie J., and Carminati, Andrea
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- 2024
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40. Hybridization barriers between the congeneric antarctic notothenioid fish Notothenia coriiceps and Notothenia rossii
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Desvignes, Thomas, Le François, Nathalie R., Streeter, Margaret, Grondin, Jacob, Singer, Emily, Postlethwait, John H., and Detrich, III, H. William
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- 2024
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41. The timing database: An open-access, live repository for interval timing studies
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Aydoğan, Turaç, Karşılar, Hakan, Duyan, Yalçın Akın, Akdoğan, Başak, Baccarani, Alessia, Brochard, Renaud, De Corte, Benjamin, Crystal, Jonathon D., Çavdaroğlu, Bilgehan, Gallistel, Charles Randy, Grondin, Simon, Gür, Ezgi, Hallez, Quentin, de Jong, Joost, van Maanen, Leendert, Matell, Matthew, Narayanan, Nandakumar S., Özoğlu, Ezgi, Öztel, Tutku, Vatakis, Argiro, Freestone, David, and Balcı, Fuat
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- 2024
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42. First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices
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M. Dugenne, M. Corrales-Ugalde, J. Y. Luo, R. Kiko, T. D. O'Brien, J.-O. Irisson, F. Lombard, L. Stemmann, C. Stock, C. R. Anderson, M. Babin, N. Bhairy, S. Bonnet, F. Carlotti, A. Cornils, E. T. Crockford, P. Daniel, C. Desnos, L. Drago, A. Elineau, A. Fischer, N. Grandrémy, P.-L. Grondin, L. Guidi, C. Guieu, H. Hauss, K. Hayashi, J. A. Huggett, L. Jalabert, L. Karp-Boss, K. M. Kenitz, R. M. Kudela, M. Lescot, C. Marec, A. McDonnell, Z. Mériguet, B. Niehoff, M. Noyon, T. Panaïotis, E. Peacock, M. Picheral, E. Riquier, C. Roesler, J.-B. Romagnan, H. M. Sosik, G. Spencer, J. Taucher, C. Tilliette, and M. Vilain
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Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
In marine ecosystems, most physiological, ecological, or physical processes are size dependent. These include metabolic rates, the uptake of carbon and other nutrients, swimming and sinking velocities, and trophic interactions, which eventually determine the stocks of commercial species, as well as biogeochemical cycles and carbon sequestration. As such, broad-scale observations of plankton size distribution are important indicators of the general functioning and state of pelagic ecosystems under anthropogenic pressures. Here, we present the first global datasets of the Pelagic Size Structure database (PSSdb), generated from plankton imaging devices. This release includes the bulk particle normalized biovolume size spectrum (NBSS) and the bulk particle size distribution (PSD), along with their related parameters (slope, intercept, and R2) measured within the epipelagic layer (0–200 m) by three imaging sensors: the Imaging FlowCytobot (IFCB), the Underwater Vision Profiler (UVP), and benchtop scanners. Collectively, these instruments effectively image organisms and detrital material in the 7–10 000 µm size range. A total of 92 472 IFCB samples, 3068 UVP profiles, and 2411 scans passed our quality control and were standardized to produce consistent instrument-specific size spectra averaged to 1° × 1° latitude and longitude and by year and month. Our instrument-specific datasets span most major ocean basins, except for the IFCB datasets we have ingested, which were exclusively collected in northern latitudes, and cover decadal time periods (2013–2022 for IFCB, 2008–2021 for UVP, and 1996–2022 for scanners), allowing for a further assessment of the pelagic size spectrum in space and time. The datasets that constitute PSSdb's first release are available at https://doi.org/10.5281/zenodo.11050013 (Dugenne et al., 2024b). In addition, future updates to these data products can be accessed at https://doi.org/10.5281/zenodo.7998799.
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- 2024
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43. Assessing the treatment response of lateral elbow tendinopathy using time-dependent ultrasonography, Doppler imaging, and elastography
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David Tobaly, Patrice Tétreault, Guy Cloutier, Manon Choinière, Philippe Grondin, Véronique Freire, Anne-Sophie Julien, and Nathalie J. Bureau
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Tennis elbow ,Tendinopathy ,Elastography ,Ultrasonography (Doppler) ,Dry needling ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Objective To investigate the structural alterations, neovascularity, and elasticity of tendons and the relationship between elasticity and the Patient Rated Tennis Elbow Evaluation score after undergoing US-guided fenestration or surgery in patients with chronic lateral elbow tendinopathy. Methods Participants from the per-protocol population of a randomized trial conducted between October 2016 and June 2020 were included. The surgery and fenestration groups included 24 (mean age, 50 ± 7 years [standard deviation], 10 men) and 29 (47 ± 8 years, 18 men) participants, respectively. Ultrasound exams were performed at baseline, 6 months, and 12 months. Statistical analyses included linear mixed effects and generalized equation estimation models. Results Fenestration had no significant impact on tendon thickness (p = 0.46). Conversely, surgery significantly increased tendon thickness at 6 months (p
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- 2024
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44. Comprehensive mass spectrometric metabolomic profiling of a chemically diverse collection of plants of the Celastraceae family
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Luis-Manuel Quiros-Guerrero, Pierre-Marie Allard, Louis-Felix Nothias, Bruno David, Antonio Grondin, and Jean-Luc Wolfender
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Science - Abstract
Abstract Natural products exhibit interesting structural features and significant biological activities. The discovery of new bioactive molecules is a complex process that requires high-quality metabolite profiling data to properly target the isolation of compounds of interest and enable their complete structural characterization. The same metabolite profiling data can also be used to better understand chemotaxonomic links between species. This Data Descriptor details a dataset resulting from the untargeted liquid chromatography-mass spectrometry metabolite profiling of 76 natural extracts of the Celastraceae family. The spectral annotation results and related chemical and taxonomic metadata are shared, along with proposed examples of data reuse. This data can be further studied by researchers exploring the chemical diversity of natural products. This can serve as a reference sample set for deep metabolome investigation of this chemically rich plant family.
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- 2024
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45. A Case Study from the Overexpression of OsTZF5, Encoding a CCCH Tandem Zinc Finger Protein, in Rice Plants Across Nineteen Yield Trials
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Alexandre Grondin, Mignon A. Natividad, Takuya Ogata, Asad Jan, Amélie C. M. Gaudin, Kurniawan R. Trijatmiko, Evelyn Liwanag, Kyonoshin Maruyama, Yasunari Fujita, Kazuko Yamaguchi-Shinozaki, Kazuo Nakashima, Inez H. Slamet-Loedin, and Amelia Henry
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Rice ,Transgenic ,Drought ,Yield ,Transgene expression ,Plant culture ,SB1-1110 - Abstract
Abstract Background Development of transgenic rice overexpressing transcription factors involved in drought response has been previously reported to confer drought tolerance and therefore represents a means of crop improvement. We transformed lowland rice IR64 with OsTZF5, encoding a CCCH-tandem zinc finger protein, under the control of the rice LIP9 stress-inducible promoter and compared the drought response of transgenic lines and nulls to IR64 in successive screenhouse paddy and field trials up to the T6 generation. Results Compared to the well-watered conditions, the level of drought stress across experiments varied from a minimum of − 25 to − 75 kPa at a soil depth of 30 cm which reduced biomass by 30–55% and grain yield by 1–92%, presenting a range of drought severities. OsTZF5 transgenic lines showed high yield advantage under drought over IR64 in early generations, which was related to shorter time to flowering, lower shoot biomass and higher harvest index. However, the increases in values for yield and related traits in the transgenics became smaller over successive generations despite continued detection of drought-induced transgene expression as conferred by the LIP9 promoter. The decreased advantage of the transgenics over generations tended to coincide with increased levels of homozygosity. Background cleaning of the transgenic lines as well as introgression of the transgene into an IR64 line containing major-effect drought yield QTLs, which were evaluated starting at the BC3F1 and BC2F3 generation, respectively, did not result in consistently increased yield under drought as compared to the respective checks. Conclusions Although we cannot conclusively explain the genetic factors behind the loss of yield advantage of the transgenics under drought across generations, our results help in distinguishing among potential drought tolerance mechanisms related to effectiveness of the transgenics, since early flowering and harvest index most closely reflected the levels of yield advantage in the transgenics across generations while reduced biomass did not.
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- 2024
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46. Searching for the extra-tidal stars of globular clusters using high-dimensional analysis and a core particle spray code
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Grondin, Steffani M., Webb, Jeremy J., Leigh, Nathan W. C., Speagle, Joshua S., and Khalifeh, Reem J.
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Astrophysics of Galaxies - Abstract
Three-body interactions can eject stars from the core of a globular cluster, causing them to enter the Galactic halo as extra-tidal stars. While finding extra-tidal stars is imperative for understanding cluster evolution, connecting isolated extra-tidal field stars back to their birth cluster is extremely difficult. In this work, we present a new methodology consisting of high-dimensional data analysis and a particle spray code to identify extra-tidal stars of any Galactic globular cluster using M3 as a case study. Using the t-Stochastic Neighbour Embedding (t-SNE) and Uniform Manifold Approximation and Projection (UMAP) machine learning dimensionality reduction algorithms, we first identify a set of 103 extra-tidal candidates in the APOGEE DR17 data catalogue with chemical abundances similar to M3 stars. To confirm each candidate's extra-tidal nature, we introduce corespray - a new Python-based three-body particle spray code that simulates extra-tidal stars for any Galactic globular cluster. Using Gaia EDR3 proper motions and APOGEE DR17 radial velocities, we apply multivariate Gaussian modelling and an extreme deconvolution to identify the extra-tidal candidates that are more likely to be associated with a distribution of corespray-simulated M3 extra-tidal stars than the field. Through these methods, we identify 10 new high-probability extra-tidal stars produced via three-body interactions in M3. We also explore whether any of our extra-tidal candidates are consistent with being ejected from M3 through different dynamical processes. Future applications of corespray will yield better understandings of core dynamics, star formation histories and binary fractions in globular clusters., Comment: 16 pages, 8 figures, 3 tables. Accepted for publication in Monthly Notices of the Royal Astronomical Society
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- 2022
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47. A deep spectromorphological study of the $\gamma$-ray emission surrounding the young massive stellar cluster Westerlund 1
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Aharonian, F., Ashkar, H., Backes, M., Martins, V. Barbosa, Becherini, Y., Berge, D., Bi, B., Böttcher, M., de Lavergne, M. de Bony, Bradascio, F., Brose, R., Brun, F., Bulik, T., Burger-Scheidlin, C., Cangemi, F., Caroff, S., Casanova, S., Cerruti, M., Chand, T., Chandra, S., Chen, A., Chibueze, O., Cristofari, P., Mbarubucyeye, J. Damascene, Djannati-Ataï, A., Ernenwein, J. -P., Feijen, K., de Clairfontaine, G. Fichet, Fontaine, G., Funk, S., Gabici, S., Gallant, Y. A., Ghafourizadeh, S., Giavitto, G., Giunti, L., Glawion, D., Glicenstein, J. F., Goswami, P., Grondin, M. -H., Härer, L. K., Haupt, M., Hinton, J. A., Hörbe, M., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Jamrozy, M., Joshi, V., Jung-Richardt, I., Kasai, E., Katarzyński, K., Katz, U., Khélifi, B., Kluźniak, W., Komin, Nu., Kosack, K., Kostunin, D., Mezek, G. Kukec, Lang, R. G., Stum, S. Le, Lemière, A., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Majumdar, J., Malyshev, D., Marandon, V., Marchegiani, P., Marcowith, A., Martí-Devesa, G., Marx, R., Maurin, G., Meyer, M., Mitchell, A., Moderski, R., Mohrmann, L., Montanari, A., Moulin, E., Muller, J., Murach, T., Nakashima, K., de Naurois, M., Nayerhoda, A., Niemiec, J., Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Prokhorov, D. A., Pühlhofer, G., Punch, M., Quirrenbach, A., Rauth, R., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Reville, B., Rieger, F., Rowell, G., Rudak, B., Ruiz-Velasco, E., Sahakian, V., Salzmann, H., Sanchez, D. A., Santangelo, A., Sasaki, M., Schüssler, F., Schutte, H. M., Schwanke, U., Shapopi, J. N. S., Specovius, A., Spencer, S., Stawarz, Ł., Steenkamp, R., Steinmassl, S., Steppa, C., Sushch, I., Suzuki, H., Takahashi, T., Tanaka, T., Terrier, R., Thorpe-Morgan, C., Tsirou, M., Tsuji, N., Tuffs, R., Unbehaun, T., van Eldik, C., van Soelen, B., Vecchi, M., Veh, J., Venter, C., Vink, J., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zhu, S. J., Zouari, S., Żywucka, N., Blackwell, R., Braiding, C., Burton, M., Cubuk, K., Filipović, M., Tothill, N., and Wong, G.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
Young massive stellar clusters are extreme environments and potentially provide the means for efficient particle acceleration. Indeed, they are increasingly considered as being responsible for a significant fraction of cosmic rays (CRs) accelerated within the Milky Way. Westerlund 1, the most massive known young stellar cluster in our Galaxy is a prime candidate for studying this hypothesis. While the very-high-energy $\gamma$-ray source HESS J1646-458 has been detected in the vicinity of Westerlund 1 in the past, its association could not be firmly identified. We aim to identify the physical processes responsible for the $\gamma$-ray emission around Westerlund 1 and thus to better understand the role of massive stellar clusters in the acceleration of Galactic CRs. Using 164 hours of data recorded with the High Energy Stereoscopic System (H.E.S.S.), we carried out a deep spectromorphological study of the $\gamma$-ray emission of HESS J1646-458. We furthermore employed H I and CO observations of the region to infer the presence of gas that could serve as target material for interactions of accelerated CRs. We detected large-scale ($\sim 2^\circ$ diameter) $\gamma$-ray emission with a complex morphology, exhibiting a shell-like structure and showing no significant variation with $\gamma$-ray energy. The combined energy spectrum of the emission extends to several tens of TeV, and is uniform across the entire source region. We did not find a clear correlation of the $\gamma$-ray emission with gas clouds as identified through H I and CO observations. We conclude that, of the known objects within the region, only Westerlund 1 can explain the bulk of the $\gamma$-ray emission. Several CR acceleration sites and mechanisms are conceivable, and discussed in detail. (abridged), Comment: 15 pages, 9 figures. Corresponding authors: L. Mohrmann, S. Ohm, R. Rauth, A. Specovius. v2: corrected affiliation of M. Vecchi (still incorrect in journal version)
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- 2022
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48. Search for dark matter annihilation signals in the H.E.S.S. Inner Galaxy Survey
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Collaboration, H. E. S. S., Abdalla, H., Aharonian, F., Benkhali, F. Ait, Anguner, E. O., Armand, C., Ashkar, H., Backes, M., Baghmanyan, V., Martins, V. Barbosa, Batzofin, R., Becherini, Y., Berge, D., Bernlohr, K., Bi, B., Bottcher, M., Bolmont, J., de Lavergne, M. de Bony, Brose, R., Brun, F., Cangemi, F., Caroff, S., Cerruti, M., Chand, T., Chen, A., Cotter, G., Mbarubucyeye, J. Damascene, Devin, J., Djannati-Ataı, A., Dmytriiev, A., Doroshenko, V., Egberts, K., Fiasson, A., de Clairfontaine, G. Fichet, Fontaine, G., Funk, S., Gabici, S., Giavitto, G., Glawion, D., Glicenstein, J. F., Grondin, M. -H., Hinton, J. A., Hofmann, W., Holch, T. L., Holler, M., Horns, D., Huang, Zhiqiu, Jamrozy, M., Jankowsky, F., Kasai, E., Katarzynski, K., Katz, U., Khelifi, B., Kluzniak, W., Komin, Nu., Kosack, K., Kostunin, D., Lamanna, G., Lemoine-Goumard, M., Lenain, J. -P., Leuschner, F., Lohse, T., Luashvili, A., Lypova, I., Mackey, J., Malyshev, D., Marandon, V., Marchegiani, P., Martı-Devesa, G., Marx, R., Maurin, G., Meyer, M., Mitchell, A., Moderski, R., Montanari, A., Moulin, E., Muller, J., de Naurois, M., Niemiec, J., Noel, A. Priyana, Ohm, S., Olivera-Nieto, L., Wilhelmi, E. de Ona, Ostrowski, M., Panny, S., Panter, M., Parsons, R. D., Peron, G., Poireau, V., Prokoph, H., Puhlhofer, G., Punch, M., Quirrenbach, A., Reichherzer, P., Reimer, A., Reimer, O., Renaud, M., Rieger, F., Rowell, G., Rudak, B., Ricarte, H. Rueda, Ruiz-Velasco, E., Sahakian, V., Salzmann, H., Santangelo, A., Sasaki, M., Schussler, F., Schutte, H. M., Schwanke, U., Senniappan, M., Shapopi, J. N. S., Sol, H., Specovius, A., Spencer, S., Stawarz, L., Stegmann, C., Steinmassl, S., Steppa, C., Takahashi, T., Tanaka, T., Terrier, R., Thorpe-Morgan, C., Tluczykont, M., Tsirou, M., Tsuji, N., Uchiyama, Y., van Eldik, C., Veh, J., Vink, J., Wagner, S. J., White, R., Wierzcholska, A., Wong, Yu Wun, Zacharias, M., Zargaryan, D., Zdziarski, A. A., Zech, A., Zhu, S. J., Zouari, S., and Zywucka, N.
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Astrophysics - High Energy Astrophysical Phenomena - Abstract
The central region of the Milky Way is one of the foremost locations to look for dark matter (DM) signatures. We report the first results on a search for DM particle annihilation signals using new observations from an unprecedented gamma-ray survey of the Galactic Center (GC) region, ${\it i.e.}$, the Inner Galaxy Survey, at very high energies ($\gtrsim$ 100 GeV) performed with the H.E.S.S. array of five ground-based Cherenkov telescopes. No significant gamma-ray excess is found in the search region of the 2014-2020 dataset and a profile likelihood ratio analysis is carried out to set exclusion limits on the annihilation cross section $\langle \sigma v\rangle$. Assuming Einasto and Navarro-Frenk-White (NFW) DM density profiles at the GC, these constraints are the strongest obtained so far in the TeV DM mass range. For the Einasto profile, the constraints reach $\langle \sigma v\rangle$ values of $\rm 3.7\times10^{-26} cm^3s^{-1}$ for 1.5 TeV DM mass in the $W^+W^-$ annihilation channel, and $\rm 1.2 \times 10^{-26} cm^3s^{-1}$ for 0.7 TeV DM mass in the $\tau^+\tau^-$ annihilation channel. With the H.E.S.S. Inner Galaxy Survey, ground-based $\gamma$-ray observations thus probe $\langle \sigma v\rangle$ values expected from thermal-relic annihilating TeV DM particles., Comment: Accepted in Phys. Rev. Lett., includes Supplemental materials. 5+10 pages, 2+8 figures, 4 tables
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- 2022
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49. The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond
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Chan, Lauren E, Thessen, Anne E, Duncan, William D, Matentzoglu, Nicolas, Schmitt, Charles, Grondin, Cynthia J, Vasilevsky, Nicole, McMurry, Julie A, Robinson, Peter N, Mungall, Christopher J, and Haendel, Melissa A
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Information and Computing Sciences ,Networking and Information Technology R&D (NITRD) ,Prevention ,Generic health relevance ,Good Health and Well Being ,Humans ,Biological Ontologies ,Databases ,Factual ,Biomedical ontology ,Environmental exposures ,Environmental health ,Other Biological Sciences ,Artificial Intelligence and Image Processing ,Information Systems ,Information and computing sciences - Abstract
BackgroundEvaluating the impact of environmental exposures on organism health is a key goal of modern biomedicine and is critically important in an age of greater pollution and chemicals in our environment. Environmental health utilizes many different research methods and generates a variety of data types. However, to date, no comprehensive database represents the full spectrum of environmental health data. Due to a lack of interoperability between databases, tools for integrating these resources are needed. In this manuscript we present the Environmental Conditions, Treatments, and Exposures Ontology (ECTO), a species-agnostic ontology focused on exposure events that occur as a result of natural and experimental processes, such as diet, work, or research activities. ECTO is intended for use in harmonizing environmental health data resources to support cross-study integration and inference for mechanism discovery.Methods and findingsECTO is an ontology designed for describing organismal exposures such as toxicological research, environmental variables, dietary features, and patient-reported data from surveys. ECTO utilizes the base model established within the Exposure Ontology (ExO). ECTO is developed using a combination of manual curation and Dead Simple OWL Design Patterns (DOSDP), and contains over 2700 environmental exposure terms, and incorporates chemical and environmental ontologies. ECTO is an Open Biological and Biomedical Ontology (OBO) Foundry ontology that is designed for interoperability, reuse, and axiomatization with other ontologies. ECTO terms have been utilized in axioms within the Mondo Disease Ontology to represent diseases caused or influenced by environmental factors, as well as for survey encoding for the Personalized Environment and Genes Study (PEGS).ConclusionsWe constructed ECTO to meet Open Biological and Biomedical Ontology (OBO) Foundry principles to increase translation opportunities between environmental health and other areas of biology. ECTO has a growing community of contributors consisting of toxicologists, public health epidemiologists, and health care providers to provide the necessary expertise for areas that have been identified previously as gaps.
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- 2023
50. How Does Students' Use of Speech Ground and Embody Their Mechanical Reasoning during Engineering Discourse?
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Grondin, Matthew M., Swart, Michael I., Pandey, Arushi R., Fu, Kate, and Nathan, Mitchell J.
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This full paper concerns an exploratory study that investigates students' reasoning about torsion. Mechanical reasoning is critical to engineering applications and yet students still struggle to accurately predict, analyze, and model mechanical systems using formal symbolic notations (i.e., formalizations). To understand the nature of students' reasoning, we analyzed students' discourse to explore two competing hypotheses: (H1) The "Formalisms First" (FF) hypothesis that students report their mechanical reasoning predominantly using mathematical formalisms that take on a disembodied, allocentric (observer) point-of-view; or (H2) the "Grounded and Embodied Cognition" (GEC) hypothesis that students predominantly use independent speech which includes analogy and imagery to simulate the physical structure and function of an object(s) using an embodied, egocentric (first-person) point-of-view in addition to an allocentric point-of-view. Qualitative results from discourse analysis of two student dyads showed that students' mechanical reasoning revealed through their speech included both analogy and imagery, as predicted by H2. Students generated analogies and imagery that described dynamic behaviors, such as how torque caused displacement, stored and released energy, and fractured. Usage of analogies and imagery supports that students' mechanical reasoning often drew upon simulations of torsion-related sensorimotor experiences. Students' egocentric and allocentric imagery invoked sensorial experiences in their speech, with allocentric viewpoints being more common, as predicted by H1 and H2. Student discourse included many references to formalisms, also consistent with the H1. Data from students' verbal discourse on mechanical reasoning suggests they employ both GEC and FF viewpoints of torsion, which has implications for designing effective learning experiences and for assessing students' knowledge.
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- 2023
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