42 results on '"Grimes V"'
Search Results
2. High-resolution Sr-isotopic evolution of Black Sea water during the Holocene: Implications for reconnection with the global ocean
- Author
-
Ankindinova, O., Hiscott, R.N., Aksu, A.E., and Grimes, V.
- Published
- 2019
- Full Text
- View/download PDF
3. Diet and mobility of fauna from Late Neolithic–Chalcolithic site of Perdigões, Portugal
- Author
-
Žalaitė, I., Maurer, A.F., Grimes, V., Silva, A.M., Ribeiro, S., Santos, J.F., Barrocas Dias, C., and Valera, A.C.
- Published
- 2018
- Full Text
- View/download PDF
4. Oxygen isotope analysis of biogenic phosphate in mammalian bone and teeth : investigating sample pretreatment methodology and intra-species biological variation on oxygen isotope-based palaeoclimate reconstructions during the British Middle to Late Pleistocene
- Author
-
Grimes, V. H.
- Subjects
930.1 ,Isotopes, Oxygen, Bone. Teeth, Methodology, Pretreatment, Palaeoclimate, Britain, Pleistocene, Fauna - Published
- 2006
5. Emergence, continuity, and evolution of Yersinia pestis throughout medieval and early modern Denmark.
- Author
-
Eaton, K, Sidhu, RK, Klunk, J, Gamble, JA, Boldsen, JL, Carmichael, AG, Varlık, N, Duchene, S, Featherstone, L, Grimes, V, Golding, GB, DeWitte, SN, Holmes, EC, Poinar, HN, Eaton, K, Sidhu, RK, Klunk, J, Gamble, JA, Boldsen, JL, Carmichael, AG, Varlık, N, Duchene, S, Featherstone, L, Grimes, V, Golding, GB, DeWitte, SN, Holmes, EC, and Poinar, HN
- Abstract
The historical epidemiology of plague is controversial due to the scarcity and ambiguity of available data.1,2 A common source of debate is the extent and pattern of plague re-emergence and local continuity in Europe during the 14th-18th century CE.3 Despite having a uniquely long history of plague (∼5,000 years), Scandinavia is relatively underrepresented in the historical archives.4,5 To better understand the historical epidemiology and evolutionary history of plague in this region, we performed in-depth (n = 298) longitudinal screening (800 years) for the plague bacterium Yersinia pestis (Y. pestis) across 13 archaeological sites in Denmark from 1000 to 1800 CE. Our genomic and phylogenetic data captured the emergence, continuity, and evolution of Y. pestis in this region over a period of 300 years (14th-17th century CE), for which the plague-positivity rate was 8.3% (3.3%-14.3% by site). Our phylogenetic analysis revealed that the Danish Y. pestis sequences were interspersed with those from other European countries, rather than forming a single cluster, indicative of the generation, spread, and replacement of bacterial variants through communities rather than their long-term local persistence. These results provide an epidemiological link between Y. pestis and the unknown pestilence that afflicted medieval and early modern Europe. They also demonstrate how population-scale genomic evidence can be used to test hypotheses on disease mortality and epidemiology and help pave the way for the next generation of historical disease research.
- Published
- 2023
6. Leprosy in Medieval Denmark: a multi-tissue and multi-isotopic approach to investigate life histories
- Author
-
Brozou, A., Fuller, B. T., Grimes, V., Biesen, G., Lynnerup, N., Boldsen, J. L., Jorkov, M. L., Pedersen, D. D., Jesper Olsen, and Mannino, M. A.
- Published
- 2020
- Full Text
- View/download PDF
7. Confocal x-ray Fluorescence Imaging Facilitates High-Resolution Elemental Mapping in Fragile Archaeological Bone
- Author
-
Choudhury, S., primary, Swanston, T., additional, Varney, T. L., additional, Cooper, D. M. L., additional, George, G. N., additional, Pickering, I. J., additional, Grimes, V., additional, Bewer, B., additional, and Coulthard, I., additional
- Published
- 2016
- Full Text
- View/download PDF
8. Finding Vikings with isotope analysis : the view from wet and windy islands
- Author
-
Montgomery, J., Grimes, V., Buckberry, J., Evans, J.A., Richards, M.P., and Barrett, J.H.
- Abstract
Identifying people of exotic origins with isotopes depends upon finding isotopic attributes that are inconsistent with the indigenous population. This task is seldom straightforward and may vary with physical geography, through time, and with cultural practices. Isotopes and trace elements were measured in four Viking Age (8th to 10th centuries A.D.) skeletons from Dublin, Ireland, and three from Westness, Orkney. These were compared with other data from these locations and contemporaneous skeletons from Britain. We conclude that the male skeletons from Dublin have disparate origins, two originating beyond the shores of Ireland, and that the female and two male skeletons from Westness are not indigenous to Orkney. However, the homeland of the female, in contrast to the males, is unlikely to be in Scandinavia.
- Published
- 2014
9. Strontium isotope evidence for landscape use by early hominins
- Author
-
Copeland, S R, Sponheimer, M, de Ruiter, D J, Lee-Thorp, J A, Codron, D, le Roux, P J, Grimes, V, Richards, M P, and University of Zurich
- Subjects
1000 Multidisciplinary ,10253 Department of Small Animals ,630 Agriculture ,570 Life sciences ,biology - Published
- 2011
- Full Text
- View/download PDF
10. Multi-isotope analysis
- Author
-
Jay, M., Grimes, V., Montgomery, J., Lakin, K., Evans, J., Brown, F., Howard-Davis, C., Brennand, M., Boyle, A., Evans, T., O'Connor, S., Spence, A., Heawood, R., and Lupton, A.
- Subjects
Ferry Fryston ,Isotope ,Ferrybridge ,Chariot - Published
- 2007
11. Prenatal HIV testing and antiretroviral prophylaxis at an urban hospital--Atlanta, Georgia, 1997-2000
- Author
-
Nesheim, S, Henderson, S, Lindsay, M, Zuberi, J, Grimes, V, Buehler, J, Lindegren, ML, and Bulterys, M
- Subjects
Pregnant women ,Antiviral agents ,Zidovudine ,HIV infection in children ,Infants (Newborn) - Abstract
In 1994, the U.S. Public Health Service (USPHS) recommended the use of zidovudine (ZDV) to reduce perinatal human immunodeficiency virus (HIV) transmission; in 1995, USPHS recommended universal prenatal HIV counseling [...]
- Published
- 2004
12. Assessment of increase in perinatal exposure to HIV among Hispanics--20 counties, Georgia, 1994-2002
- Author
-
Nesheim, S., Dennis, R., Grimes, V., Shouse, R.L., Dominguez, K., Ali, Z., Beck-Sague, C.M., and Asamoa, K.
- Subjects
HIV infection -- Causes of ,HIV infection -- Statistics ,Infants -- Health aspects ,Hispanic Americans -- Health aspects - Abstract
CDC recently received reports from clinicians in a specialized. pediatric human immunodeficiency virus (HIV) care clinic (clinic A) suggesting that the number of perinatally HIV-exposed Hispanic infants in the Atlanta [...]
- Published
- 2004
13. National Missile Defense (NMD) System Integration Test
- Author
-
Cody, V., primary and Grimes, V., additional
- Published
- 1993
- Full Text
- View/download PDF
14. Genomic evidence for the Pleistocene and recent population history of Native Americans
- Author
-
Raghavan, M., Steinrücken, M, Harris, M, Schiffels, Stephan, DeGiorgio, Michael, Albrechtsen, M, Valdiosera, M, Ávila-Arcos, M, Malaspinas, M, Eriksson, Anders, Moltke, M, Homburger, M, Wall, Jeff, Cornejo, Omar, Moreno-Mayar, M, Korneliussen, M, Pierre, M, Rasmussen, Rasmus, Campos, Paul, de Barros Damgaard, Peter, Allentoft, M., Lindo, John, Metspalu, M., Rodríguez-Varela, Carlos, Mansilla, M, Henrickson, Celeste, Seguin-Orlando, M, Malmström, M, Stafford, M, Shringarpure, M, Moreno-Estrada, M, Karmin, M., Tambets, Kristiina, Bergström, Anders, Xue, Yali, Vera, Vera, Friend, Andrew, Singarayer, M, Valdes, Paul, Balloux, François, Leboreiro, M, Vera, M, Rangel-Villalobos, M, Pettener, David, Luiselli, Donata, Davis, Loren, Heyer, M, Zollikofer, Chris, Ponce de León, M, Smith, M, Grimes, John, Pike, John, Deal, John, Fuller, M, Arriaza, Bernardo, Standen, Vivien, Luz, M., Ricaut, M, Guidon, M, Osipova, Ludmila, Voevoda, M., Posukh, Olga, Balanovsky, M, Lavryashina, M., Bogunov, M, Khusnutdinova, M, Gubina, M., Balanovska, M, Fedorova, M, Litvinov, Sergey, Malyarchuk, M, Derenko, M., Mosher, M., Archer, David, Cybulski, Jerome, Petzelt, Barbara, Mitchell, Joycelynn, Worl, Rosita, Norman, Paul, Parham, Peter, Kemp, Brian, Kivisild, Toomas, Smith, Chris, Sandhu, Manjinder, Crawford, Michael, Villems, Richard, Smith, David, Waters, Michael, Goebel, Ted, Johnson, John, Malhi, Ripan, Jakobsson, Mattias, Meltzer, David, Manica, Andrea, Durbin, Richard, Bustamante, Carlos, Song, Yun, Nielsen, Rasmus, Willerslev, Eske, Steinrucken, M., Harris, K., Rasmussen, S., Albrechtsen, A., Valdiosera, C., Avila-Arcos, M., Malaspinas, S., Moltke, I., Homburger, J., Moreno-Mayar, J., Korneliussen, S., Pierre, T., Rasmussen, M., Damgaard, P., Metspalu, E., Rodriguez-Varela, R., Mansilla, J., Seguin-Orlando, A., Malmstrom, H., Stafford, T., Shringarpure, S., Moreno-Estrada, A., Bergstrom, A., Warmuth, V., Singarayer, J., Leboreiro, I., Vera, J., Rangel-Villalobos, H., Heyer, E., Ponce De Leon, M., Grimes, V., Pike, K., Deal, M., Fuller, T., Ricaut, F., Guidon, N., Balanovsky, O., Bogunov, Y., Khusnutdinova, E., Balanovska, E., Fedorova, S., Malyarchuk, B., Norman, J., Kemp, M., Malhi, S., Meltzer, J., Song, S., Swedish Institute of Space Physics [Uppsala] (IRF), Institut de Recherche sur le Cancer et le Vieillissement (IRCAN), Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA), Human Evolution, The Wellcome Trust Sanger Institute [Cambridge], Centre National de la Recherche Scientifique (CNRS), School of Geographical Sciences [Bristol], University of Bristol [Bristol], University of Edinburgh, University of Bologna, Universidad de Tarapaca, Institute of Cytology and Genetics, Russian Academy of Sciences [Moscow] (RAS), School of Health Science, Higher Education Centre Novo mesto, Departments of Chemistry and of Structural Biology, Stanford University, Department of Anthropology, Washington State University (WSU), Leverhulme Centre for Human Evolutionary Studies University of Cambridge, University of Cambridge [UK] (CAM), Centre for Cybercrime and Computer Security [Newcastle], School of Computing Science [Newcastle], Newcastle University [Newcastle]-Newcastle University [Newcastle], Strangeways Research Laboratory, MRC, UMR 6578 : Anthropologie Bio-Culturelle (UAABC), Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS), Harvard Medical School [Boston] (HMS), Evolutionary Biology, Uppsala University, Department of Biological Statistics and Computational Biology, Cornell University [New York], Dept Integrat Biol, Section for GeoGenetics, Globe Institute, Faculty of Health and Medical Sciences, University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)-Faculty of Health and Medical Sciences, University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU), Eco-Anthropologie et Ethnobiologie (EAE), Muséum national d'Histoire naturelle (MNHN)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), Department of Nuclear Medicine, Austin Health-Centre for Positron Emission Tomography (PET)-Austin Hospital [Melbourne], Austin Health, Laboratoire d'études spatiales et d'instrumentation en astrophysique (LESIA (UMR_8109)), Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire de Paris, Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Paris Diderot - Paris 7 (UPD7)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Fundaçao Museu do Homem Americano (FUMDHAM), Department of Mechanical Engineering, Sogang University, parent, Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Nice Sophia Antipolis (... - 2019) (UNS), Université Côte d'Azur (UCA)-Université Côte d'Azur (UCA), Stanford University [Stanford], UMR 6578 : Adaptabilité Biologique et Culturelle (UAABC), Cornell University, PSL Research University (PSL)-PSL Research University (PSL)-Université Paris Diderot - Paris 7 (UPD7)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Raghavan, Maanasa, Steinrücken, Matthia, Harris, Kelley, Schiffels, Stephan, Rasmussen, Simon, Degiorgio, Michael, Albrechtsen, Ander, Valdiosera, Cristina, Ávila-Arcos, María C., Malaspinas, Anna-Sapfo, Eriksson, Ander, Moltke, Ida, Metspalu, Mait, Homburger, Julian R., Wall, Jeff, Cornejo, Omar E., Moreno-Mayar, J. Víctor, Korneliussen, Thorfinn S., Pierre, Tracey, Rasmussen, Morten, Campos, Paula F., De Barros Damgaard, Peter, Allentoft, Morten E., Lindo, John, Metspalu, Ene, Rodríguez-Varela, Ricardo, Mansilla, Josefina, Henrickson, Celeste, Seguin-Orlando, Andaine, Malmstöm, Helena, Stafford, Thoma, Shringarpure, Suyash S., Moreno-Estrada, André, Karmin, Monika, Tambets, Kristiina, Bergström, Ander, Xue, Yali, Warmuth, Vera, Friend, Andrew D., Singarayer, Joy, Valdes, Paul, Balloux, Francoi, Leboreiro, Ilán, Vera, Jose Lui, Rangel-Villalobos, Hector, Pettener, Davide, Luiselli, Donata, Davis, Loren G., Heyer, Evelyne, Zollikofer, Christoph P. E., Ponce De León, Marcia S., Smith, Colin I., Grimes, Vaughan, Pike, Kelly-Anne, Deal, Michael, Fuller, Benjamin T., Arriaza, Bernardo, Standen, Vivien, Luz, Maria F., Ricaut, Francoi, Guidon, Niede, Osipova, Ludmila, Voevoda, Mikhail I., Posukh, Olga L., Balanovsky, Oleg, Lavryashina, Maria, Bogunov, Yuri, Khusnutdinova, Elza, Gubina, Marina, Balanovska, Elena, Fedorova, Sardana, Litvinov, Sergey, Malyarchuk, Bori, Derenko, Miroslava, Mosher, M.J., Archer, David, Cybulski, Jerome, Petzelt, Barbara, Mitchell, Joycelynn, Worl, Rosita, Norman, Paul J., Parham, Peter, Kemp, Brian M., Kivisild, Tooma, Tyler-Smith, Chri, Sandhu, Manjinder S., Crawford, Michael, Villems, Richard, Smith, David Glenn, Waters, Michael R., Goebel, Ted, Johnson, John R., Malhi, Ripan S., Jakobsson, Mattia, Meltzer, David J., Manica, Andrea, Durbin, Richard, Bustamante, Carlos D., Song, Yun S., Nielsen, Rasmu, Willerslev, Eske, Université Nice Sophia Antipolis (1965 - 2019) (UNS), University of Bologna/Università di Bologna, University of Copenhagen = Københavns Universitet (UCPH)-University of Copenhagen = Københavns Universitet (UCPH)-Faculty of Health and Medical Sciences, and University of Copenhagen = Københavns Universitet (UCPH)-University of Copenhagen = Københavns Universitet (UCPH)
- Subjects
ARCHAEOLOGICAL SEQUENCE ,Gene Flow ,Pleistocene ,CRANIAL MORPHOLOGY ,CLOVIS ,MIGRATION ,Human Migration ,Population ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Population genetics ,NEW-WORLD ,America ,Biology ,Beringia ,Gene flow ,SOUTH-AMERICA ,03 medical and health sciences ,0601 history and archaeology ,education ,History, Ancient ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,CONDITIONAL SAMPLING DISTRIBUTION ,Multidisciplinary ,060102 archaeology ,Models, Genetic ,Human migration ,business.industry ,Medicine (all) ,06 humanities and the arts ,BRAZIL ,MODEL ,Siberia ,South american ,ORIGINS ,Genomic ,Indians, North American ,Ethnology ,Athabascans ,business ,Human - Abstract
How and when the Americas were populated remains contentious. Using ancient and modern genome wide data we found that the ancestors of all present day Native Americans including Athabascans and Amerindians entered the Americas as a single migration wave from Siberia no earlier than 23 thousand years ago (ka) and after no more than an 8000 year isolation period in Beringia. After their arrival to the Americas ancestral Native Americans diversified into two basal genetic branches around 13 ka one that is now dispersed across North and South America and the other restricted to North America. Subsequent gene flow resulted in some Native Americans sharing ancestry with present day East Asians (including Siberians) and more distantly Australo Melanesians. Putative “Paleoamerican” relict populations including the historical Mexican Pericúes and South American Fuego Patagonians are not directly related to modern Australo Melanesians as suggested by the Paleoamerican Model. INTRODUCTION The consensus view on the peopling of the Americas is that ancestors of modern Native Americans entered the Americas from Siberia via the Bering Land Bridge and that this occurred at least {\textasciitilde}14.6 thousand years ago (ka). However the number and timing of migrations into the Americas remain controversial with conflicting interpretations based on anatomical and genetic evidence. RATIONALE In this study we address four major unresolved issues regarding the Pleistocene and recent population history of Native Americans: (i) the timing of their divergence from their ancestral group (ii) the number of migrations into the Americas (iii) whether there was {\textasciitilde}15000 years of isolation of ancestral Native Americans in Beringia (Beringian Incubation Model) and (iv) whether there was post Pleistocene survival of relict populations in the Americas related to Australo Melanesians as suggested by apparent differences in cranial morphologies between some early (“Paleoamerican”) remains and those of more recent Native Americans. We generated 31 high coverage modern genomes from the Americas Siberia and Oceania; 23 ancient genomic sequences from the Americas dating between {\textasciitilde}0.2 and 6 ka; and SNP chip genotype data from 79 present day individuals belonging to 28 populations from the Americas and Siberia. The above data sets were analyzed together with published modern and ancient genomic data from worldwide populations after masking some present day Native Americans for recent European admixture. RESULTS Using three different methods we determined the divergence time for all Native Americans (Athabascans and Amerindians) from their Siberian ancestors to be {\textasciitilde}20 ka and no earlier than {\textasciitilde}23 ka. Furthermore we dated the divergence between Athabascans (northern Native American branch together with northern North American Amerindians) and southern North Americans and South and Central Americans (southern Native American branch) to be {\textasciitilde}13 ka. Similar divergence times from East Asian populations and a divergence time between the two branches that is close in age to the earliest well established archaeological sites in the Americas suggest that the split between the branches occurred within the Americas. We additionally found that several sequenced Holocene individuals from the Americas are related to present day populations from the same geographical regions implying genetic continuity of ancient and modern populations in some parts of the Americas over at least the past 8500 years. Moreover our results suggest that there has been gene flow between some Native Americans from both North and South America and groups related to East Asians and Australo Melanesians the latter possibly through an East Asian route that might have included ancestors of modern Aleutian Islanders. Last using both genomic and morphometric analyses we found that historical Native American groups such as the Pericúes and Fuego Patagonians were not “relicts” of Paleoamericans and hence our results do not support an early migration of populations directly related to Australo Melanesians into the Americas. CONCLUSION Our results provide an upper bound of {\textasciitilde}23 ka on the initial divergence of ancestral Native Americans from their East Asian ancestors followed by a short isolation period of no more than {\textasciitilde}8000 years and subsequent entrance and spread across the Americas. The data presented are consistent with a single migration model for all Native Americans with later gene flow from sources related to East Asians and indirectly Australo Melanesians. The single wave diversified {\textasciitilde}13 ka likely within the Americas giving rise to the northern and southern branches of present day Native Americans. View larger version: In this page In a new window Download PowerPoint Slide for Teaching Population history of present day Native Americans.The ancestors of all Native Americans entered the Americas as a single migration wave from Siberia (purple) no earlier than {\textasciitilde}23 ka separate from the Inuit (green) and diversified into “northern” and “southern” Native American branches {\textasciitilde}13 ka. There is evidence of post divergence gene flow between some Native Americans and groups related to East Asians/Inuit and Australo Melanesians (yellow). Genetic history of Native Americans Several theories have been put forth as to the origin and timing of when Native American ancestors entered the Americas. To clarify this controversy Raghavan et al. examined the genomic variation among ancient and modern individuals from Asia and the Americas. There is no evidence for multiple waves of entry or recurrent gene flow with Asians in northern populations. The earliest migrations occurred no earlier than 23000 years ago from Siberian ancestors. Amerindians and Athabascans originated from a single population splitting approximately 13000 years ago. Science this issue 10.1126/science.aab3884
- Full Text
- View/download PDF
15. POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans
- Author
-
Maanasa, Raghavan, Matthias, Steinrücken, Kelley, Harris, Stephan, Schiffels, Simon, Rasmussen, Michael, DeGiorgio, Anders, Albrechtsen, Cristina, Valdiosera, María C, Ávila-Arcos, Anna-Sapfo, Malaspinas, Anders, Eriksson, Ida, Moltke, Mait, Metspalu, Julian R, Homburger, Jeff, Wall, Omar E, Cornejo, J Víctor, Moreno-Mayar, Thorfinn S, Korneliussen, Tracey, Pierre, Morten, Rasmussen, Paula F, Campos, Peter, de Barros Damgaard, Morten E, Allentoft, John, Lindo, Ene, Metspalu, Ricardo, Rodríguez-Varela, Josefina, Mansilla, Celeste, Henrickson, Andaine, Seguin-Orlando, Helena, Malmström, Thomas, Stafford, Suyash S, Shringarpure, Andrés, Moreno-Estrada, Monika, Karmin, Kristiina, Tambets, Anders, Bergström, Yali, Xue, Vera, Warmuth, Andrew D, Friend, Joy, Singarayer, Paul, Valdes, Francois, Balloux, Ilán, Leboreiro, Jose Luis, Vera, Hector, Rangel-Villalobos, Davide, Pettener, Donata, Luiselli, Loren G, Davis, Evelyne, Heyer, Christoph P E, Zollikofer, Marcia S, Ponce de León, Colin I, Smith, Vaughan, Grimes, Kelly-Anne, Pike, Michael, Deal, Benjamin T, Fuller, Bernardo, Arriaza, Vivien, Standen, Maria F, Luz, Francois, Ricaut, Niede, Guidon, Ludmila, Osipova, Mikhail I, Voevoda, Olga L, Posukh, Oleg, Balanovsky, Maria, Lavryashina, Yuri, Bogunov, Elza, Khusnutdinova, Marina, Gubina, Elena, Balanovska, Sardana, Fedorova, Sergey, Litvinov, Boris, Malyarchuk, Miroslava, Derenko, M J, Mosher, David, Archer, Jerome, Cybulski, Barbara, Petzelt, Joycelynn, Mitchell, Rosita, Worl, Paul J, Norman, Peter, Parham, Brian M, Kemp, Toomas, Kivisild, Chris, Tyler-Smith, Manjinder S, Sandhu, Michael, Crawford, Richard, Villems, David Glenn, Smith, Michael R, Waters, Ted, Goebel, John R, Johnson, Ripan S, Malhi, Mattias, Jakobsson, David J, Meltzer, Andrea, Manica, Richard, Durbin, Carlos D, Bustamante, Yun S, Song, Rasmus, Nielsen, Eske, Willerslev, Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, Damgaard Pde B, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CP, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, and Willerslev E
- Subjects
Gene Flow ,Siberia ,Models, Genetic ,Athabascans and Amerindians ,Human Migration ,Genetic history of Native American ,Indians, North American ,Humans ,Genomics ,Americas ,Population genetic ,History, Ancient ,Article - Abstract
How and when the Americas were populated remains contentious. Using ancient and modern genome-wide data, we find that the ancestors of all present-day Native Americans, including Athabascans and Amerindians, entered the Americas as a single migration wave from Siberia no earlier than 23 thousand years ago (KYA), and after no more than 8,000-year isolation period in Beringia. Following their arrival to the Americas, ancestral Native Americans diversified into two basal genetic branches around 13 KYA, one that is now dispersed across North and South America and the other is restricted to North America. Subsequent gene flow resulted in some Native Americans sharing ancestry with present-day East Asians (including Siberians) and, more distantly, Australo-Melanesians. Putative ‘Paleoamerican’ relict populations, including the historical Mexican Pericúes and South American Fuego-Patagonians, are not directly related to modern Australo-Melanesians as suggested by the Paleoamerican Model.
- Published
- 2015
16. Strontium isoscape of sub-Saharan Africa allows tracing origins of victims of the transatlantic slave trade.
- Author
-
Wang X, Bocksberger G, Arandjelovic M, Agbor A, Angedakin S, Aubert F, Ayimisin EA, Bailey E, Barubiyo D, Bessone M, Bobe R, Bonnet M, Boucher R, Brazzola G, Brewer S, Lee KC, Carvalho S, Chancellor R, Cipoletta C, Cohen H, Copeland SR, Corogenes K, Costa AM, Coupland C, Curran B, de Ruiter DJ, Deschner T, Dieguez P, Dierks K, Dilambaka E, Dowd D, Dunn A, Egbe VE, Finckh M, Fruth B, Gijanto L, Yuh YG, Goedmakers A, Gokee C, Gomes Coelho R, Goodman AH, Granjon AC, Grimes V, Grueter CC, Haour A, Hedwig D, Hermans V, Hernandez-Aguilar RA, Hohmann G, Imong I, Jeffery KJ, Jones S, Junker J, Kadam P, Kambere M, Kambi M, Kienast I, Knudson KJ, Langergraber KE, Lapeyre V, Lapuente J, Larson B, Lautenschläger T, le Roux P, Leinert V, Llana M, Logan A, Lowry B, Lüdecke T, Maretti G, Marrocoli S, Fernandez R, McNeill PJ, Meier AC, Meller P, Monroe JC, Morgan D, Mulindahabi F, Murai M, Neil E, Nicholl S, Niyigaba P, Normand E, Ormsby LJ, Diotoh O, Pacheco L, Piel A, Preece J, Regnaut S, Richard FG, Richards MP, Rundus A, Sanz C, Sommer V, Sponheimer M, Steele TE, Stewart FA, Tagg N, Tédonzong LR, Tickle A, Toubga L, van Schijndel J, Vergnes V, Njomen NW, Wessling EG, Willie J, Wittig RM, Yurkiw K, Zipkin AM, Zuberbühler K, Kühl HS, Boesch C, and Oelze VM
- Subjects
- Africa South of the Sahara, Humans, Enslaved Persons history, Human Migration history, Strontium Isotopes analysis, Archaeology
- Abstract
Strontium isotope (
87 Sr/86 Sr) analysis with reference to strontium isotope landscapes (Sr isoscapes) allows reconstructing mobility and migration in archaeology, ecology, and forensics. However, despite the vast potential of research involving87 Sr/86 Sr analysis particularly in Africa, Sr isoscapes remain unavailable for the largest parts of the continent. Here, we measure the87 Sr/86 Sr ratios in 778 environmental samples from 24 African countries and combine this data with published data to model a bioavailable Sr isoscape for sub-Saharan Africa using random forest regression. We demonstrate the efficacy of this Sr isoscape, in combination with other lines of evidence, to trace the African roots of individuals from historic slavery contexts, particularly those with highly radiogenic87 Sr/86 Sr ratios uncommon in the African Diaspora. Our study provides an extensive African87 Sr/86 Sr dataset which includes scientifically marginalized regions of Africa, with significant implications for the archaeology of the transatlantic slave trade, wildlife ecology, conservation, and forensics., Competing Interests: Competing interests: The authors declare no competing interest., (© 2024. The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
17. Use of strontium isotope ratios in potential geolocation of Ajnala skeletal remains: a forensic archeological study.
- Author
-
Sehrawat JS, Agrawal S, Kenney AP, Grimes V, and Rai N
- Subjects
- Humans, Child, Strontium Isotopes, Strontium, Isotopes, Body Remains, Archaeology
- Abstract
Stable isotope methods for provenance of unidentified human remains are relatively a newer field of enquiry in forensic archeology. It is of great interest for forensic experts these days. The application of strontium isotope analyses for estimating geolocation of archeological remains is of great interest in bioarcheology and modern forensics. The strontium (Sr) isotope composition of human bones and teeth has been widely used to reconstruct an individual's geo-affiliation, residential mobility, and migration history. Thousands of unknown human remains, reportedly belonging to 282 Indian soldiers of 26th Native Bengal regiment and killed in 1857, were exhumed non-scientifically from an abandoned well situated underneath a religious structure at Ajnala (Amritsar, India). Whether these remains belonged to the individuals, local or non-local to the site, was the important forensic archeological question to be answered by doing their thorough forensic anthropological examinations. In the present study, 27 mandibular teeth (18 s molars, 6 first molars, and 3 premolars) collected from the Ajnala skeletal assemblage were processed for strontium isotope analysis, and the measured ratios were compared with published isotope baseline data to estimate the locality status of these remains. The Sr isotopic values were concentrated in the range of 0.7175 to 0.7270. The comparative analysis of isotopic ratios revealed that most individuals buried in the Ajnala well have
87 Sr/86 Sr values close to the river as well as groundwater of the Gangetic plain (less radiogenic87 Sr/86 Sr ~ 0.716); most likely originated near Varanasi (Uttar Pradesh, India) region, whereas the individuals with higher87 Sr/86 Sr ratios (~ 0.7200) probably resided in the West Bengal and Bihar areas where the river as well as groundwater of the Gangetic plain is relatively more radiogenic. Thus, the strontium isotope results reveal that the Ajnala individuals did not grow up or live in the Amritsar region during their childhood, and this observation complemented the previous forensic anthropological and molecular findings. There is very little Indian data on the bioavailable strontium, so the inferences from the present study estimating Sr isotope abundances are expected to provide baseline data for future forensic provenance studies that will contribute to the global efforts of mapping Sr isotope variations by the isotope community., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2024
- Full Text
- View/download PDF
18. The history of Coast Salish "woolly dogs" revealed by ancient genomics and Indigenous Knowledge.
- Author
-
Lin AT, Hammond-Kaarremaa L, Liu HL, Stantis C, McKechnie I, Pavel M, Pavel SSM, Wyss SSÁ, Sparrow DQ, Carr K, Aninta SG, Perri A, Hartt J, Bergström A, Carmagnini A, Charlton S, Dalén L, Feuerborn TR, France CAM, Gopalakrishnan S, Grimes V, Harris A, Kavich G, Sacks BN, Sinding MS, Skoglund P, Stanton DWG, Ostrander EA, Larson G, Armstrong CG, Frantz LAF, Hawkins MTR, and Kistler L
- Subjects
- Animals, Genomics, Northwestern United States, Breeding, Dogs anatomy & histology, Dogs classification, Dogs genetics, Wool, Selection, Genetic
- Abstract
Ancestral Coast Salish societies in the Pacific Northwest kept long-haired "woolly dogs" that were bred and cared for over millennia. However, the dog wool-weaving tradition declined during the 19th century, and the population was lost. In this study, we analyzed genomic and isotopic data from a preserved woolly dog pelt from "Mutton," collected in 1859. Mutton is the only known example of an Indigenous North American dog with dominant precolonial ancestry postdating the onset of settler colonialism. We identified candidate genetic variants potentially linked with their distinct woolly phenotype. We integrated these data with interviews from Coast Salish Elders, Knowledge Keepers, and weavers about shared traditional knowledge and memories surrounding woolly dogs, their importance within Coast Salish societies, and how colonial policies led directly to their disappearance.
- Published
- 2023
- Full Text
- View/download PDF
19. Emergence, continuity, and evolution of Yersinia pestis throughout medieval and early modern Denmark.
- Author
-
Eaton K, Sidhu RK, Klunk J, Gamble JA, Boldsen JL, Carmichael AG, Varlık N, Duchene S, Featherstone L, Grimes V, Golding GB, DeWitte SN, Holmes EC, and Poinar HN
- Subjects
- Humans, Phylogeny, Genome, Bacterial, Denmark, Yersinia pestis genetics, Plague epidemiology, Plague microbiology
- Abstract
The historical epidemiology of plague is controversial due to the scarcity and ambiguity of available data.
1 , 2 A common source of debate is the extent and pattern of plague re-emergence and local continuity in Europe during the 14th-18th century CE.3 Despite having a uniquely long history of plague (∼5,000 years), Scandinavia is relatively underrepresented in the historical archives.4 , 5 To better understand the historical epidemiology and evolutionary history of plague in this region, we performed in-depth (n = 298) longitudinal screening (800 years) for the plague bacterium Yersinia pestis (Y. pestis) across 13 archaeological sites in Denmark from 1000 to 1800 CE. Our genomic and phylogenetic data captured the emergence, continuity, and evolution of Y. pestis in this region over a period of 300 years (14th-17th century CE), for which the plague-positivity rate was 8.3% (3.3%-14.3% by site). Our phylogenetic analysis revealed that the Danish Y. pestis sequences were interspersed with those from other European countries, rather than forming a single cluster, indicative of the generation, spread, and replacement of bacterial variants through communities rather than their long-term local persistence. These results provide an epidemiological link between Y. pestis and the unknown pestilence that afflicted medieval and early modern Europe. They also demonstrate how population-scale genomic evidence can be used to test hypotheses on disease mortality and epidemiology and help pave the way for the next generation of historical disease research., Competing Interests: Declaration of interests J.K. declares financial interest in Daicel Arbor Biosciences, which provided the myBaits probes for targeted capture., (Copyright © 2023 Elsevier Inc. All rights reserved.)- Published
- 2023
- Full Text
- View/download PDF
20. Comparison between strip sampling and laser ablation methods to infer seasonal movements from intra-tooth strontium isotopes profiles in migratory caribou.
- Author
-
Le Corre M, Grimes V, Lam R, and Britton K
- Subjects
- Animals, Seasons, Lasers, Strontium Isotopes, Reindeer, Laser Therapy, Deer
- Abstract
Strontium isotopes analysis is a powerful tool in the study of past animal movements, notably the sequential analysis of tooth enamel to reconstruct individual movements in a time-series. Compared to traditional solution analysis, high resolution sampling using laser-ablation multi-collector inductively coupled plasma mass spectrometry (LA-MC-ICP-MS) has the potential to reflect fine scale mobility. However, the averaging of the
87 Sr/86 Sr intake during the enamel mineralization process may limit fine scale inferences. We compared solution and LA-MC-ICP-MS87 Sr/86 Sr intra-tooth profiles from the second and third molars of 5 caribou from the Western Arctic herd, Alaska. Profiles from both methods showed similar trends, reflecting the seasonal migratory movements, but LA-MC-ICP-MS profiles showed a less damped87 Sr/86 Sr signal than solution profiles. Geographic assignments of the profile endmembers to the known summer and winter ranges were consistent between methods and with the expected timing of enamel formation but showed discrepancy at a finer scale. Variations on LA-MC-ICP-MS profiles, consistent with expected seasonal movements, suggested more than an admixture of the endmember values. However, more work in understanding enamel formation in Rangifer, and other ungulates, and how87 Sr/86 Sr daily intake translates into enamel are needed to assess the real resolution that can be achieved with LA-MC-ICP-MS., (© 2023. The Author(s).)- Published
- 2023
- Full Text
- View/download PDF
21. Finding Mycenaeans in Minoan Crete? Isotope and DNA analysis of human mobility in Bronze Age Crete.
- Author
-
Richards M, Smith C, Nehlich O, Grimes V, Weston D, Mittnik A, Krause J, Dobney K, Tzedakis Y, and Martlew H
- Subjects
- Greece, History, Ancient, Human Migration, Humans, Strontium Isotopes analysis, Sulfur, Sulfur Isotopes, Archaeology, Isotopes
- Abstract
We undertook a large-scale study of Neolithic and Bronze Age human mobility on Crete using biomolecular methods (isotope analysis, DNA), with a particular focus on sites dating to the Late Bronze Age ('Late Minoan') period. We measured the strontium and sulphur isotope values of animal remains from archaeological sites around the island of Crete to determine the local baseline values. We then measured the strontium and sulphur values of humans from Late Neolithic and Bronze Age sites. Our results indicate that most of the humans have sulphur and strontium isotope values consistent with being local to Crete, showing no evidence for a wide-scale movement of people from the Greek mainland or other areas away from Crete in these time periods. However, we found four individuals from the late Bronze Age (Late Minoan III) cemetery of Armenoi with sulphur isotope values not typically found in Crete and are instead consistent with an origin elsewhere. This cemetery at Armenoi also has one of only a few examples of the newly adopted Mycenaean Linear B script on Crete found outside of the palace sites, pointing to an influence (trade and possible migration) from the mainland, which may then be the place of origin of these four individuals. DNA (mtDNA) studies of eight Late Bronze Age individuals from Armenoi have results consistent with people living in Aegean region at this time and cannot be used to distinguish between individuals from Crete ('Minoans') and the Greek mainland ['Mycenaeans'])., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2022
- Full Text
- View/download PDF
22. Insights into biogenic and diagenetic lead exposure in experimentally altered modern and archaeological bone: Synchrotron radiation X-ray fluorescence imaging.
- Author
-
Simpson R, Varney TL, Coulthard I, Swanston T, Grimes V, Munkittrick TJA, Jankauskas R, and Cooper DML
- Subjects
- Aged, Archaeology, Humans, Optical Imaging, X-Rays, Lead, Synchrotrons
- Abstract
Bones represent a valuable biological archive of environmental lead (Pb) exposure for modern and archaeological populations. Synchrotron radiation X-ray fluorescence imaging (SR-XFI) generates maps of Pb in bone on a microstructural scale, potentially providing insights into an individual's history of Pb exposure and, in the context of archaeological bone, the biogenic or diagenetic nature of its uptake. The aims of this study were to (1) examine biogenic spatial patterns for Pb from bone samples of modern cadavers compared with patterns observed archaeologically, and (2) test the hypothesis that there are spatial differences in the distribution of Pb for diagenetic and biogenic modes of uptake in bone. To address these aims, this study used inductively coupled plasma-mass spectrometry (ICP-MS) and SR-XFI on unaltered and experimentally altered cadaveric bone samples (University of Saskatchewan, Saskatoon, SK) and archaeological bone samples from 18th to 19th century archaeological sites from Antigua and Lithuania. Bone concentrations of modern individuals are relatively low compared to those of archaeological individuals. SR-XFI results provide insights into modern Saskatchewan Pb exposure with some samples demonstrating a pattern of relatively low Pb exposure with higher levels of Pb exposure occurring in bone structures of a relatively older age that formed earlier in life, likely during the era of leaded gasoline (pre-1980s), and other samples demonstrating a pattern of fairly consistent, low-level exposure. Results support hypotheses for the spatial distribution of Pb corresponding to biogenic vs. diagenetic uptake. Diagenetic Pb is mainly confined to the periosteal surface of each sample with some enrichment of cracks and sub-periosteal canals. This may be useful in the future for differentiating diagenetic from biogenic Pb accumulation, analyzing environmental contamination, and informing sampling strategies in archaeological or fossil bone., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
23. Leprosy in medieval Denmark: Exploring life histories through a multi-tissue and multi-isotopic approach.
- Author
-
Brozou A, Fuller BT, Grimes V, Lynnerup N, Boldsen JL, Jørkov ML, Pedersen DD, Olsen J, and Mannino MA
- Subjects
- Adult, Anthropology, Physical, Bone and Bones metabolism, Denmark ethnology, Female, History, Medieval, Humans, Isotopes metabolism, Male, Radiometric Dating, Bone and Bones chemistry, Isotopes analysis, Leprosy ethnology, Leprosy history
- Abstract
Objectives: By focusing on two Danish leprosaria (Naestved and Odense; 13th-16th c. CE) and using diet and origin as proxies, we follow a multi-isotopic approach to reconstruct life histories of patients and investigate how leprosy affected both institutionalized individuals and the medieval Danish community as a whole., Materials and Methods: We combine archaeology, historical sources, biological anthropology, isotopic analyses (δ
13 C, δ15 N, δ34 S,87 Sr/86 Sr) and radiocarbon dating, and further analyze bones with different turnover rates (ribs and long bones)., Results: The δ13 C, δ15 N and δ34 S results indicate a C3 terrestrial diet with small contributions of marine protein for leprosy patients and individuals from other medieval Danish sites. A similar diet is seen through time, between males and females, and patients with and without changes on facial bones. The isotopic comparison between ribs and long bones reveals no significant dietary change. The δ34 S and87 Sr/86 Sr results suggest that patients were local to the regions of the leprosaria. Moreover, the radiocarbon dates show a mere 50% agreement with the arm position dating method used in Denmark., Conclusions: A local origin for the leprosy patients is in line with historical evidence, unlike the small dietary contribution of marine protein. Although only 10% of the analyzed individuals have rib/long bone offsets that undoubtedly show a dietary shift, the data appear to reveal a pattern for 25 individuals (out of 50), with elevated δ13 C and/or δ15 N values in the ribs compared to the long bones, which points toward a communal type of diet and reveals organizational aspects of the institution., (© 2021 Wiley Periodicals LLC.)- Published
- 2021
- Full Text
- View/download PDF
24. Feasting and Mobility in Iron Age Ireland: Multi-isotope analysis reveals the vast catchment of Navan Fort, Ulster.
- Author
-
Madgwick R, Grimes V, Lamb AL, Nederbragt AJ, Evans JA, and McCormick F
- Abstract
Navan Fort is an iconic prehistoric Irish ceremonial centre and the legendary capital of Ulster. The fort has produced an exceptional pig-dominated faunal assemblage that also contained a barbary macaque skull. Dating from the 4
th to 1st century BC, it is likely to be a ceremonial feasting centre that may have drawn people and their animals from across Ulster and beyond. This study uses a multi-isotope (87 Sr/86 Sr, δ34 S, δ13 C, δ15 N) approach to identify non-local animals and reconstruct site catchment. New biosphere mapping means that isotope data can be more confidently interpreted and the combination of strontium and sulphur analysis has the potential to estimate origins. In the absence of human remains, fauna provide the best proxy for human movement. Results for the 35 analysed animals are wide-ranging, especially in terms of strontium (0.707-0.715), which has the largest range for an Irish site. Sulphur values are more restricted (13.1‰-17.1‰) but are high in the context of British and Irish data. Results provide clear evidence for animals (and thus people) coming from across Ulster and beyond, demonstrating the site's wide catchment. Navan Fort was clearly a major ceremonial centre with far-reaching influence and hosted feasts that drew people and animals from afar.- Published
- 2019
- Full Text
- View/download PDF
25. Decreased humoral immunity to mumps in young adults immunized with MMR vaccine in childhood.
- Author
-
Rasheed MAU, Hickman CJ, McGrew M, Sowers SB, Mercader S, Hopkins A, Grimes V, Yu T, Wrammert J, Mulligan MJ, Bellini WJ, Rota PA, Orenstein WA, Ahmed R, and Edupuganti S
- Subjects
- Adolescent, Adult, Antibodies, Neutralizing blood, Antibodies, Viral blood, Child, Child, Preschool, Female, Humans, Immunity, Humoral drug effects, Immunization, Immunoglobulin G blood, Immunoglobulin G immunology, Infant, Male, Measles-Mumps-Rubella Vaccine pharmacology, Mumps prevention & control, Mumps virology, Young Adult, Antibodies, Neutralizing immunology, Antibodies, Viral immunology, Immunity, Humoral immunology, Measles-Mumps-Rubella Vaccine administration & dosage, Mumps immunology, Mumps virus immunology
- Abstract
In the past decade, multiple mumps outbreaks have occurred in the United States, primarily in close-contact, high-density settings such as colleges, with a high attack rate among young adults, many of whom had the recommended 2 doses of mumps-measles-rubella (MMR) vaccine. Waning humoral immunity and the circulation of divergent wild-type mumps strains have been proposed as contributing factors to mumps resurgence. Blood samples from 71 healthy 18- to 23-year-old college students living in a non-outbreak area were assayed for antibodies and memory B cells (MBCs) to mumps, measles, and rubella. Seroprevalence rates of mumps, measles, and rubella determined by IgG enzyme-linked immunosorbent assay (ELISA) were 93, 93, and 100%, respectively. The index standard ratio indicated that the concentration of IgG was significantly lower for mumps than rubella. High IgG avidity to mumps Enders strain was detected in sera of 59/71 participants who had sufficient IgG levels. The frequency of circulating mumps-specific MBCs was 5 to 10 times lower than measles and rubella, and 10% of the participants had no detectable MBCs to mumps. Geometric mean neutralizing antibody titers (GMTs) by plaque reduction neutralization to the predominant circulating wild-type mumps strain (genotype G) were 6-fold lower than the GMTs against the Jeryl Lynn vaccine strain (genotype A). The majority of the participants (80%) received their second MMR vaccine ≥10 years prior to study participation. Additional efforts are needed to fully characterize B and T cell immune responses to mumps vaccine and to develop strategies to improve the quality and durability of vaccine-induced immunity., Competing Interests: The authors declare no conflict of interest.
- Published
- 2019
- Full Text
- View/download PDF
26. Dorset Pre-Inuit and Beothuk foodways in Newfoundland, ca. AD 500-1829.
- Author
-
Harris AJT, Duggan AT, Marciniak S, Marshall I, Fuller BT, Southon J, Poinar HN, and Grimes V
- Subjects
- Bone and Bones chemistry, Carbon Isotopes analysis, Collagen chemistry, Diet, Fossils, History, Ancient, Humans, Newfoundland and Labrador ethnology, Nitrogen Isotopes analysis, Radiometric Dating, Rivers, Seafood analysis, Taiga, Archaeology, Feeding Behavior, Indians, North American history, Inuit history
- Abstract
Archaeological research on the Canadian island of Newfoundland increasingly demonstrates that the island's subarctic climate and paucity of terrestrial food resources did not restrict past Pre-Inuit (Dorset) and Native American (Beothuk) hunter-gatherer populations to a single subsistence pattern. This study first sought to characterize hunter-gatherer diets over the past 1500 years; and second, to assess the impact of European colonization on Beothuk lifeways by comparing the bone chemistry of Beothuk skeletal remains before and after the intensification of European settlement in the early 18th century. We employed radiocarbon dating and stable carbon and nitrogen isotope ratio analysis of bulk bone collagen from both Dorset (n = 9) and Beothuk (n = 13) cultures, including a naturally mummified 17th century Beothuk individual. Carbon and nitrogen isotope analysis of 108 faunal samples from Dorset and Beothuk archaeological sites around the island were used as a dietary baseline for the humans. We combined our results with previously published isotope data and radiocarbon dates from Dorset (n = 12) and Beothuk (n = 18) individuals and conducted a palaeodietary analysis using Bayesian modelling, cluster analysis and comparative statistical tests. Dorset diets featured more marine protein than those of the Beothuk, and the diets of Beothuk after the 18th century featured less high trophic level marine protein than those of individuals predating the 18th century. Despite inhabiting the same island, Dorset and Beothuk cultures employed markedly different dietary strategies, consistent with interpretations of other archaeological data. Significantly, European colonization had a profound effect on Beothuk lifeways, as in response to the increasing European presence on the coast, the Beothuk relied more extensively on the limited resources of the island's boreal forests and rivers., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
- Full Text
- View/download PDF
27. The evolutionary history of dogs in the Americas.
- Author
-
Ní Leathlobhair M, Perri AR, Irving-Pease EK, Witt KE, Linderholm A, Haile J, Lebrasseur O, Ameen C, Blick J, Boyko AR, Brace S, Cortes YN, Crockford SJ, Devault A, Dimopoulos EA, Eldridge M, Enk J, Gopalakrishnan S, Gori K, Grimes V, Guiry E, Hansen AJ, Hulme-Beaman A, Johnson J, Kitchen A, Kasparov AK, Kwon YM, Nikolskiy PA, Lope CP, Manin A, Martin T, Meyer M, Myers KN, Omura M, Rouillard JM, Pavlova EY, Sciulli P, Sinding MS, Strakova A, Ivanova VV, Widga C, Willerslev E, Pitulko VV, Barnes I, Gilbert MTP, Dobney KM, Malhi RS, Murchison EP, Larson G, and Frantz LAF
- Subjects
- Americas, Animals, Cell Nucleus genetics, Dog Diseases genetics, Genome, Mitochondrial, Human Migration, Humans, Phylogeny, Sexually Transmitted Diseases transmission, Siberia, Wolves classification, Wolves genetics, Biological Evolution, Dog Diseases transmission, Dogs classification, Dogs genetics, Domestication, Neoplasms veterinary, Sexually Transmitted Diseases veterinary
- Abstract
Dogs were present in the Americas before the arrival of European colonists, but the origin and fate of these precontact dogs are largely unknown. We sequenced 71 mitochondrial and 7 nuclear genomes from ancient North American and Siberian dogs from time frames spanning ~9000 years. Our analysis indicates that American dogs were not derived from North American wolves. Instead, American dogs form a monophyletic lineage that likely originated in Siberia and dispersed into the Americas alongside people. After the arrival of Europeans, native American dogs almost completely disappeared, leaving a minimal genetic legacy in modern dog populations. The closest detectable extant lineage to precontact American dogs is the canine transmissible venereal tumor, a contagious cancer clone derived from an individual dog that lived up to 8000 years ago., (Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2018
- Full Text
- View/download PDF
28. Technique for Preparing Ultrathin and Nanothin Descemet Stripping Automated Endothelial Keratoplasty Tissue.
- Author
-
Cheung AY, Hou JH, Bedard P, Grimes V, Buckman N, Eslani M, and Holland EJ
- Subjects
- Cell Count, Corneal Diseases surgery, Endothelial Cells cytology, Humans, Corneal Endothelial Cell Loss pathology, Descemet Stripping Endothelial Keratoplasty methods, Tissue and Organ Harvesting methods
- Abstract
Purpose: To describe and report outcomes of our single-pass microkeratome technique for preparation of ultrathin (UT, ≤100 μm) and nanothin (NT, ≤50 μm) Descemet stripping automated endothelial keratoplasty (DSAEK) grafts., Methods: To prepare NT-DSAEK grafts, a pachymetry nomogram specific to each technician and individual microkeratome head was developed based on accumulated precut and postcut pachymetry data from previous DSAEK grafts. Mean graft thickness as well as precut and postcut endothelial cell counts (ECCs) of NT-DSAEK, UT-DSAEK, and Descemet membrane endothelial keratoplasty (DMEK) grafts between July 2015 and July 2017 were calculated and compared statistically. Endothelial cell loss was evaluated using calcein AM stains and ImageJ analysis. Postcut graft thickness and rates of perforation/tissue loss for NT-DSAEK grafts between May and July 2017 were calculated to determine overall graft preparation success rates., Results: Mean postcut graft thickness for all grafts within the NT range was 41.0 ± 6.4 μm (range 26-50 μm). Mean ECC did not differ between NT-DSAEK, UT-DSAEK, and DMEK grafts (P = 0.759 and 0.633, respectively). The overall tissue loss rate from attempted NT-DSAEK was 4.8%. Excluding cases of perforation, the chance of achieving NT thickness was 60% and within the traditional UT range was 100%., Conclusions: We propose the term "NT-DSAEK" for grafts ≤50 μm. The described nomogram allows for standardized creation of NT grafts with a low tissue loss rate. This technique is safe and does not result in significant ECC loss compared with UT-DSAEK and DMEK grafts. Further studies are necessary to corroborate the postsurgical results of NT grafts.
- Published
- 2018
- Full Text
- View/download PDF
29. Genetic Discontinuity between the Maritime Archaic and Beothuk Populations in Newfoundland, Canada.
- Author
-
Duggan AT, Harris AJT, Marciniak S, Marshall I, Kuch M, Kitchen A, Renaud G, Southon J, Fuller B, Young J, Fiedel S, Golding GB, Grimes V, and Poinar H
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Archaeology, Child, Child, Preschool, Female, Humans, Indians, North American, Infant, Infant, Newborn, Male, Middle Aged, Newfoundland and Labrador, Young Adult, DNA, Ancient analysis, Genetic Variation, Genome, Human, Genome, Mitochondrial, Human Migration
- Abstract
Situated at the furthest northeastern edge of Canada, the island of Newfoundland (approximately 110,000 km
2 ) and Labrador (approximately 295,000 km2 ) today constitute a province characterized by abundant natural resources but low population density. Both landmasses were covered by the Laurentide ice sheet during the Last Glacial Maximum (18,000 years before present [YBP]); after the glacier retreated, ice patches remained on the island until ca. 9,000 calibrated (cal) YBP [1]. Nevertheless, indigenous peoples, whose ancestors had trekked some 5,000 km from the west coast, arrived approximately 10,000 cal YBP in Labrador and ca. 6,000 cal YBP in Newfoundland [2, 3]. Differential features in material culture indicate at least three settlement episodes by distinct cultural groups, including the Maritime Archaic, Palaeoeskimo, and Beothuk. Newfoundland has remained home to indigenous peoples until present day with only one apparent hiatus (3,400-2,800 YBP). This record suggests abandonment, severe constriction, or local extinction followed by subsequent immigrations from single or multiple source populations, but the specific dynamics and the cultural and biological relationships, if any, among these successive peoples remain enigmatic [4]. By examining the mitochondrial genome diversity and isotopic ratios of 74 ancient remains in conjunction with the archaeological record, we have provided definitive evidence for the genetic discontinuity between the maternal lineages of these populations. This northeastern margin of North America appears to have been populated multiple times by distinct groups that did not share a recent common ancestry, but rather one much deeper in time at the entry point into the continent., (Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.)- Published
- 2017
- Full Text
- View/download PDF
30. POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.
- Author
-
Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, de Barros Damgaard P, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CPE, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, and Willerslev E
- Subjects
- Americas, Gene Flow, Genomics, History, Ancient, Humans, Indians, North American genetics, Models, Genetic, Siberia, Human Migration history, Indians, North American history
- Abstract
How and when the Americas were populated remains contentious. Using ancient and modern genome-wide data, we found that the ancestors of all present-day Native Americans, including Athabascans and Amerindians, entered the Americas as a single migration wave from Siberia no earlier than 23 thousand years ago (ka) and after no more than an 8000-year isolation period in Beringia. After their arrival to the Americas, ancestral Native Americans diversified into two basal genetic branches around 13 ka, one that is now dispersed across North and South America and the other restricted to North America. Subsequent gene flow resulted in some Native Americans sharing ancestry with present-day East Asians (including Siberians) and, more distantly, Australo-Melanesians. Putative "Paleoamerican" relict populations, including the historical Mexican Pericúes and South American Fuego-Patagonians, are not directly related to modern Australo-Melanesians as suggested by the Paleoamerican Model., (Copyright © 2015, American Association for the Advancement of Science.)
- Published
- 2015
- Full Text
- View/download PDF
31. The genetic prehistory of the New World Arctic.
- Author
-
Raghavan M, DeGiorgio M, Albrechtsen A, Moltke I, Skoglund P, Korneliussen TS, Grønnow B, Appelt M, Gulløv HC, Friesen TM, Fitzhugh W, Malmström H, Rasmussen S, Olsen J, Melchior L, Fuller BT, Fahrni SM, Stafford T Jr, Grimes V, Renouf MA, Cybulski J, Lynnerup N, Lahr MM, Britton K, Knecht R, Arneborg J, Metspalu M, Cornejo OE, Malaspinas AS, Wang Y, Rasmussen M, Raghavan V, Hansen TV, Khusnutdinova E, Pierre T, Dneprovsky K, Andreasen C, Lange H, Hayes MG, Coltrain J, Spitsyn VA, Götherström A, Orlando L, Kivisild T, Villems R, Crawford MH, Nielsen FC, Dissing J, Heinemeier J, Meldgaard M, Bustamante C, O'Rourke DH, Jakobsson M, Gilbert MT, Nielsen R, and Willerslev E
- Subjects
- Alaska ethnology, Arctic Regions ethnology, Base Sequence, Bone and Bones, Canada ethnology, DNA, Mitochondrial genetics, Greenland ethnology, Hair, History, Ancient, Humans, Inuit ethnology, Inuit history, Molecular Sequence Data, Siberia ethnology, Survivors history, Tooth, Genome, Human genetics, Human Migration, Inuit genetics
- Abstract
The New World Arctic, the last region of the Americas to be populated by humans, has a relatively well-researched archaeology, but an understanding of its genetic history is lacking. We present genome-wide sequence data from ancient and present-day humans from Greenland, Arctic Canada, Alaska, Aleutian Islands, and Siberia. We show that Paleo-Eskimos (~3000 BCE to 1300 CE) represent a migration pulse into the Americas independent of both Native American and Inuit expansions. Furthermore, the genetic continuity characterizing the Paleo-Eskimo period was interrupted by the arrival of a new population, representing the ancestors of present-day Inuit, with evidence of past gene flow between these lineages. Despite periodic abandonment of major Arctic regions, a single Paleo-Eskimo metapopulation likely survived in near-isolation for more than 4000 years, only to vanish around 700 years ago., (Copyright © 2014, American Association for the Advancement of Science.)
- Published
- 2014
- Full Text
- View/download PDF
32. A comparison of pretreatment methods for the analysis of phosphate oxygen isotope ratios in bioapatite.
- Author
-
Grimes V and Pellegrini M
- Subjects
- Animals, Archaeology, Bone and Bones chemistry, Cattle, Mass Spectrometry, Microscopy, Electron, Scanning, Minerals chemistry, Nitrogen analysis, Spectroscopy, Fourier Transform Infrared, Swine, Apatites chemistry, Chemistry Techniques, Analytical methods, Dental Enamel chemistry, Oxygen Isotopes analysis, Phosphates chemistry
- Abstract
Rationale: The integrity of the biological phosphate oxygen isotope (δ(18)O(p) ) signal is thought to be contingent upon the complete removal of competing sources of oxygen such as associated organic matter. A range of pretreatment methods to purify phosphate material from competing sources of oxygen has been reported, with contradictory evidence on the usefulness and efficiency of one or another. Yet, a systematic comparison of these techniques for bioapatite phosphate has not been conducted., Methods: Chemical and thermal pretreatment techniques were tested for their effectiveness at removing organic matter and the likelihood that they modify original δ(18)O values. The test was performed in inorganic (synthetic apatite and a phosphorite rock) and organic (bone and tooth tissues) phosphate materials for which we had an expectation of the actual original δ(18)O(p) value. Analysis of nitrogen content (wt.%), scanning electron microscopy (SEM) and Fourier transform infrared (FTIR) spectroscopy were employed., Results: We detected variable efficiency at removing organic matter between pretreatment methods with no correlation to any specific structural change. The δ(18)O(p) results showed considerable variation between samples pretreated with the different methods and the untreated samples, with a compositional range of up to 4.5 ‰ in the bone samples. Variations of the δ(18)O(p) values within error were found for tooth enamel, phosphorite rock and inorganic apatite., Conclusions: We recommend a cautious approach when interpreting and comparing δ(18)O(p) data from bone samples treated with different pretreatment protocols. In general, the untreated samples seem to show δ(18)O(p) values closer to the expected ones. According to our results, pretreatment is completely unnecessary in highly mineralized tissues., (Copyright © 2012 John Wiley & Sons, Ltd.)
- Published
- 2013
- Full Text
- View/download PDF
33. Strontium isotope evidence for migration in late Pleistocene Rangifer: implications for Neanderthal hunting strategies at the Middle Palaeolithic site of Jonzac, France.
- Author
-
Britton K, Grimes V, Niven L, Steele TE, McPherron S, Soressi M, Kelly TE, Jaubert J, Hublin JJ, and Richards MP
- Subjects
- Animals, Bison, Dental Enamel chemistry, France, Hominidae, Humans, Reindeer, Animal Migration, Fossils, Predatory Behavior, Strontium Isotopes analysis
- Abstract
In order to understand the behaviours and subsistence choices of Palaeolithic hunter-gatherers, it is essential to understand the behavioural ecology of their prey. Here, we present strontium isotope data from sequentially-sampled enamel from three reindeer (Rangifer tarandus ssp.) and a single bison (Bison cf. priscus) from the late Middle Palaeolithic site of Jonzac (Chez-Pinaud), France. The results are used to investigate the ranging and migratory behaviours of these important prey species. We found that the bison had isotope values most consistent with a local range, while the three reindeer had values indicating a seasonal migration pattern. Due to the similarity of the patterning of two of the three reindeer and in conjunction with zooarchaeological results, we suggest that they may have been from the same herd, were likely killed around the same point during their seasonal round and may therefore be the product of a single hunting event or a small number of successive hunting events. The isotope analyses complement the zooarchaeological data and have allowed greater insight into the palaeoecology of these species, the palaeoenvironment, and Neanderthal site use and hunting strategies., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
34. Strontium isotope evidence for landscape use by early hominins.
- Author
-
Copeland SR, Sponheimer M, de Ruiter DJ, Lee-Thorp JA, Codron D, le Roux PJ, Grimes V, and Richards MP
- Subjects
- Animals, Demography, Feeding Behavior physiology, Female, Geologic Sediments chemistry, Male, South Africa, Spectrometry, Mass, Electrospray Ionization, Tooth chemistry, Diet, Fossils, Hominidae physiology, Strontium Isotopes analysis
- Abstract
Ranging and residence patterns among early hominins have been indirectly inferred from morphology, stone-tool sourcing, referential models and phylogenetic models. However, the highly uncertain nature of such reconstructions limits our understanding of early hominin ecology, biology, social structure and evolution. We investigated landscape use in Australopithecus africanus and Paranthropus robustus from the Sterkfontein and Swartkrans cave sites in South Africa using strontium isotope analysis, a method that can help to identify the geological substrate on which an animal lived during tooth mineralization. Here we show that a higher proportion of small hominins than large hominins had non-local strontium isotope compositions. Given the relatively high levels of sexual dimorphism in early hominins, the smaller teeth are likely to represent female individuals, thus indicating that females were more likely than males to disperse from their natal groups. This is similar to the dispersal pattern found in chimpanzees, bonobos and many human groups, but dissimilar from that of most gorillas and other primates. The small proportion of demonstrably non-local large hominin individuals could indicate that male australopiths had relatively small home ranges, or that they preferred dolomitic landscapes.
- Published
- 2011
- Full Text
- View/download PDF
35. Strontium isotope ratios (87Sr/86Sr) of tooth enamel: a comparison of solution and laser ablation multicollector inductively coupled plasma mass spectrometry methods.
- Author
-
Copeland SR, Sponheimer M, le Roux PJ, Grimes V, Lee-Thorp JA, de Ruiter DJ, and Richards MP
- Subjects
- Animals, Reproducibility of Results, Rodentia, Solutions, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Dental Enamel chemistry, Strontium Radioisotopes analysis
- Abstract
Strontium isotope ratios (87Sr/86Sr) in tooth enamel provide a means to investigate migration and landscape use in humans and other animals. Established methods for measuring (87)Sr/(86)Sr in teeth use bulk sampling (5-20 mg) and labor-intensive elemental purification procedures before analysis by either thermal ionization mass spectrometry (TIMS) or multicollector inductively coupled plasma mass spectrometry (MC-ICP-MS). Another method for measuring 87Sr/86Sr is laser ablation MC-ICP-MS, but concerns have been expressed about its accuracy for measuring tooth enamel. In this study we test the precision and accuracy of the technique by analyzing 30 modern rodent teeth from the Sterkfontein Valley, South Africa by laser ablation MC-ICP-MS and solution MC-ICP-MS. The results show a mean difference in 87Sr/86Sr measured by laser ablation and by solution of 0.0003 +/- 0.0002. This degree of precision is well within the margin necessary for investigating the potential geographic origins of humans or animals in many areas of the world. Because laser ablation is faster, less expensive, and less destructive than bulk sampling solution methods, it opens the possibility for conducting 87Sr/86Sr analyses of intra-tooth samples and small and/or rare specimens such as micromammal and fossil teeth.
- Published
- 2008
- Full Text
- View/download PDF
36. Stable isotope and DNA evidence for ritual sequences in Inca child sacrifice.
- Author
-
Wilson AS, Taylor T, Ceruti MC, Chavez JA, Reinhard J, Grimes V, Meier-Augenstein W, Cartmell L, Stern B, Richards MP, Worobey M, Barnes I, and Gilbert MT
- Subjects
- Adolescent, Argentina ethnology, Child, Female, Hair chemistry, History, Ancient, Humans, Isotopes, Male, Mummies, Peru ethnology, Ceremonial Behavior, DNA analysis, Homicide history, Indians, South American history
- Abstract
Four recently discovered frozen child mummies from two of the highest peaks in the south central Andes now yield tantalizing evidence of the preparatory stages leading to Inca ritual killing as represented by the unique capacocha rite. Our interdisciplinary study examined hair from the mummies to obtain detailed genetic and diachronic isotopic information. This approach has allowed us to reconstruct aspects of individual identity and diet, make inferences concerning social background, and gain insight on the hitherto unknown processes by which victims were selected, elevated in social status, prepared for a high-altitude pilgrimage, and killed. Such direct information amplifies, yet also partly contrasts with, Spanish historical accounts.
- Published
- 2007
- Full Text
- View/download PDF
37. Comparison of the stability of various internal fixators used in the treatment of osteochondritis dissecans--a mechanical model.
- Author
-
Morelli M, Poitras P, Grimes V, Backman D, and Dervin G
- Subjects
- Arthroplasty, Replacement instrumentation, Arthroplasty, Replacement methods, Biomechanical Phenomena, Bone Screws, Polyurethanes, Stress, Mechanical, Internal Fixators, Joint Instability surgery, Materials Testing methods, Models, Biological, Osteochondritis Dissecans surgery
- Abstract
The purpose of this study was to determine what characteristics of fixation devices used in the treatment of osteochondritis dissecans (OCD) contribute to improved stability to resist shear loading. An OCD model was designed using rigid polyurethane foam. Each specimen consisted of two components, an osteochondral fragment and a corresponding defect. A total of 40 specimens were prepared and assigned to one of four groups: control (no extrinsic stabilizer); two 2-mm-diameter Kirschner wires (K-wires), 40 mm in length; one threaded washer and a 28-mm screw; and one threaded washer and a 38 mm screw. Each specimen was mounted onto an Iosipescu shear test fixture and subjected to shear loads at a pseudo-static displacement rate of 0.075 mm/s. All groups demonstrated some stability; controls were significantly less stable than all other groups. The group with the threaded washer and 38-mm screw demonstrated the greatest stability (p < 0.001), and no difference was noted between the K-wire and 28-mm screw groups. These results suggest that, in this OCD model, friction conferred some intrinsic stability to resist loads in shear. However, stability was improved with the use of long implants that compressed the fragments together.
- Published
- 2007
- Full Text
- View/download PDF
38. The experience journal: a computer-based intervention for families facing congenital heart disease.
- Author
-
DeMaso DR, Gonzalez-Heydrich J, Erickson JD, Grimes VP, and Strohecker C
- Subjects
- Adolescent, Adult, Child, Child, Preschool, Chronic Disease, Feasibility Studies, Female, Humans, Male, Middle Aged, Mothers education, Software, Adaptation, Psychological, Heart Defects, Congenital psychology, Mother-Child Relations, Mothers psychology, Social Support, Therapy, Computer-Assisted organization & administration
- Abstract
Objective: To test the feasibility and safety of a computer-based application designed to facilitate the healthy coping of children and their families who must contend with significant congenital heart disease (CHD). The application, called the Experience Journal (EJ), is a psychoeducational intervention based on a narrative model involving the sharing of personal stories about an illness., Method: Testing was conducted in 2 phases. In phase 1, 9 parents of children with CHD and 1 adult with CHD were asked to use the EJ. After utilization, semistructured interviews assessed EJ usability and safety. In phase 2, 40 mothers of children with CHD used the EJ during a hospitalization. Assessment of feasibility and safety was measured through the use of semistructured interviews prior to EJ utilization and 2 to 4 weeks after hospital discharge., Results: Results revealed that the EJ was safe and useful for decreasing social isolation, increasing understanding of familial feelings about cardiac illness, and fostering positive reactions in mothers., Conclusions: Computer-based interventions that present psychoeducational and medical information closely connected to "one's own story" may open up new possibilities for families facing pediatric illnesses.
- Published
- 2000
- Full Text
- View/download PDF
39. Diagnosis of perinatal human immunodeficiency virus infection by polymerase chain reaction and p24 antigen detection after immune complex dissociation in an urban community hospital.
- Author
-
Nesheim S, Lee F, Kalish ML, Ou CY, Sawyer M, Clark S, Meadows L, Grimes V, Simonds RJ, and Nahmias A
- Subjects
- Antigen-Antibody Complex blood, DNA, Viral blood, Georgia, HIV Antibodies blood, HIV Core Protein p24 blood, HIV Infections transmission, Hospitals, Community, Humans, Infant, Infant, Newborn, Predictive Value of Tests, Prospective Studies, Sensitivity and Specificity, Enzyme-Linked Immunosorbent Assay methods, HIV Infections diagnosis, Polymerase Chain Reaction methods
- Abstract
Results of polymerase chain reaction (PCR) and p24 antigen detection after immune complex dissociation (p24-ICD) were compared with antibody results after 18 months of age for human immunodeficiency virus (HIV) diagnosis in 345 prospectively followed, perinatally exposed infants. Of 59 infected and 286 uninfected infants tested at 1-6 months of age, sensitivity and specificity were, respectively, 100% and > 97% for PCR and 90% and > 97% for p24-ICD. Testing was done on > or = 2 occasions in the first 6 months of life in 43 infected infants; 77% had > or = 2 positive results with the same test. Of these infants, 68% had 2 positive p24-ICD tests. In uninfected infants, 96% had only negative tests; none had > 1 positive. By 6 months, all uninfected infants with > or = 2 PCR results could have been diagnosed. HIV status can be determined by PCR by age 6 months in most HIV-exposed infants. p24-ICD should not be used alone, because of its lower sensitivity, but may be useful in areas without advanced laboratory support.
- Published
- 1997
- Full Text
- View/download PDF
40. Diagnosis of human immunodeficiency virus infection by enzyme-linked immunospot assays in a prospectively followed cohort of infants of human immunodeficiency virus-seropositive women.
- Author
-
Nesheim S, Lee F, Sawyer M, Jones D, Lindsay M, Slade B, Shaffer N, Holmes R, Ashby R, and Grimes V
- Subjects
- Female, Humans, Infant, Infant, Newborn, Predictive Value of Tests, Pregnancy, Prospective Studies, HIV Infections diagnosis, Immunoenzyme Techniques, Prenatal Exposure Delayed Effects
- Abstract
The enzyme-linked immunospot (ELISPOT), a method for quantifying specific and total antibody-secreting cells, was used for the diagnosis of human immunodeficiency virus (HIV) infection in a prospectively followed cohort of infants born to HIV-infected women. From July 1, 1987, to June 1, 1990, 127 infants with known HIV infection status were studied. Seventeen of 22 HIV-infected infants had specific HIV-specific antibody-secreting cells (ASC). Among the infected infants rates of ASC positivity increased during the first year of life, from 25% in the first 5 days of life to 78% after 6 months. Two of the five ASC-negative infected infants were further characterized as hypo- or dysgammaglobulinemic by an adjunct ELISPOT assay for total immunoglobulin-secreting cells. Excluding hypo- or dysgammaglobulinemic infants from the analysis, the rate of ASC positivity among infected infants was 85% (17 of 20) after the age of 6 months. None of the 95 uninfected infants had a positive ELISPOT assay, including 55 who were tested in the first 3 months of life. Thus in this series the specificity was 100%. ELISPOT methodology can be a useful technique for the diagnosis of HIV infection in infants of HIV-seropositive mothers.
- Published
- 1992
41. Regional and local high blood pressure control programs.
- Author
-
Hines E, Powell CE, Metts JC Jr, Grimes V, and Satcher D
- Subjects
- Georgia, Humans, Mass Screening, Voluntary Health Agencies organization & administration, Community Health Services organization & administration, Hypertension prevention & control
- Published
- 1981
42. Developing and enhancing a positive self-concept in deaf children.
- Author
-
Grimes VK and Prickett HT
- Subjects
- Child, Deafness rehabilitation, Humans, Deafness psychology, Education, Special, Personality Development, Self Concept
- Published
- 1988
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.