88 results on '"Griffiths AJ"'
Search Results
2. Immediate metabolic availability of dietary fat in combination with carbohydrate
- Author
-
Griffiths, AJ, primary, Humphreys, SM, additional, Clark, ML, additional, Fielding, BA, additional, and Frayn, KN, additional
- Published
- 1994
- Full Text
- View/download PDF
3. Lysosomal Activity and its Control in Encysting Hartmannella castellanii
- Author
-
Griffiths Aj and Bowen Sm
- Subjects
Sucrose ,Acid Phosphatase ,Phosphatase ,Biology ,Microbiology ,Nitrophenols ,chemistry.chemical_compound ,Enzyme activator ,Glutamates ,Organelle ,Magnesium ,Amoeba ,Incubation ,chemistry.chemical_classification ,Acid phosphatase ,Proteins ,Hydrogen-Ion Concentration ,biology.organism_classification ,Cell biology ,Enzyme Activation ,Glucose ,Enzyme ,chemistry ,Biochemistry ,Spectrophotometry ,Hartmannella ,biology.protein ,Lysosomes - Abstract
SUMMARY: A latent, non-specific phosphatase of Hartmannella castellanii with an optimum pH of 4·0 has been investigated. The latency could be released in cell-free homogenates by treatment with Triton x 100, freezing and thawing, refrigeration or carbon tetrachloride. It seems likely that this enzyme is attached to a sub-cellular organelle as it was largely sedimentable when homogenates were prepared in media containing sucrose. During encystation of the amoebae under controlled conditions there was no appreciable change in the levels of total phosphatase activity measured in frozen-thawed extracts, but there were quite large increases in free activities of fresh, unfrozen preparations. Inhibitors and promoters of encystation were also found to affect the levels of phosphatase activity in the amoebae but did not affect its sedimentability which persisted throughout the initial degradative phase of encystment. Incubation of homogenates of Hartmannella decreased the latency of the acid phosphatase but this activation could be modified by substances which are known to affect the encystation responses of the amoebae. It is concluded that the degradative phase of encystation is due to the activation of hydrolytic enzymes within sedimentable compartments of the amoebae and is not the result of hydrolases being released from these compartments. It seems likely that agents which are capable of promoting encystation may do so by inducing activation of lysosomal enzymes.
- Published
- 1969
- Full Text
- View/download PDF
4. Short report: Initial pilot of a brief career development program for autistic young adults.
- Author
-
Cadondon S, Dawson M, Carriere JA, Griffiths AJ, and Gehricke JG
- Subjects
- Child, Adolescent, Humans, Young Adult, Pilot Projects, Employment, Schools, Autistic Disorder, Child Development Disorders, Pervasive
- Abstract
Background: Many autistic young adults may struggle to progress to further education or employment after high school, highlighting the need for tailored career development programs. If provided with the proper resources and support, the obstacles faced by autistic youth in pursuing post-secondary activities may decrease., Aims: This pilot study aimed to examine the feasibility and preliminary efficacy of a brief career development program consisting of a strengths and challenges intervention paired with a 12-week workshop intervention., Methods and Procedures: We studied the participants' changes in confidence and participation in pursuing post-secondary activities using a series of questionnaires in 20 participants, ages 16-23. The Myers-Briggs Type Indicator (MBTI) and Strong Interest Inventory (SII) helped the participants choose a post-secondary path. The 1-9 Vocational Index Scale measured post-secondary participation and hours working in a normed fashion. The Confidence Index Interval: Entering Workforce measured the participants' perceived confidence related to career transition., Outcomes and Results: Our results suggested that a brief career development program paired with a strengths and challenges intervention significantly increased post-secondary involvement in autistic young adults (N = 20, p = 0.014). There were no significant changes in confidence., Conclusions and Implications: These findings provide proof of concept of a brief career development program using the MBTI and SII in young adults with ASD., What This Paper Adds: Research in career development and transition for autistic young adults reveals that career interventions specific to the autistic population are lacking. Our pilot study explores a new type of intervention that incorporates the analysis of personal strengths and challenges with a 12-week transition workshop. Our project is the first to utilize the MBTI and SII as a tool to guide autistic youth in choosing a post-secondary path. The results of our study suggest that our program significantly improves post-secondary participation in autistic young adults. The findings provide proof of concept of using the MTBI and SII with a 12-week workshop for autistic young adults. At the end of our program, several participants began pursuing post-secondary education on track to obtain associate's (N = 8) or bachelor's (N = 3) degrees. Some began trade school (N = 3) and internships (N = 2), and others began employment or onboarding to employment (N = 4). Given the need for more evidence-based career interventions for autistic adults, our pilot study contributes significantly to autism research to better serve the autistic population., (Copyright © 2023 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
5. Developing Employment Environments Where Individuals with ASD Thrive: Using Machine Learning to Explore Employer Policies and Practices.
- Author
-
Griffiths AJ, Hanson AH, Giannantonio CM, Mathur SK, Hyde K, and Linstead E
- Abstract
An online survey instrument was developed to assess employers' perspectives on hiring job candidates with Autism Spectrum Disorder (ASD). The investigators used K-means clustering to categorize companies in clusters based on their hiring practices related to individuals with ASD. This methodology allowed the investigators to assess and compare the various factors of businesses that successfully hire employees with ASD versus those that do not. The cluster analysis indicated that company structures, policies and practices, and perceptions, as well as the needs of employers and employees, were important in determining who would successfully hire individuals with ASD. Key areas that require focused policies and practices include recruitment and hiring, training, accessibility and accommodations, and retention and advancement.
- Published
- 2020
- Full Text
- View/download PDF
6. School-wide implementation of positive behavioral interventions and supports in an alternative school setting: A case study.
- Author
-
Griffiths AJ, Diamond EL, Alsip J, Furlong M, Morrison G, and Do B
- Subjects
- Adolescent, Behavior Therapy standards, California epidemiology, Child, Female, Health Plan Implementation methods, Humans, Male, Mental Disorders therapy, Research Design, Risk Management methods, School Health Services organization & administration, School Health Services standards, Schools standards, Social Behavior, Behavior Therapy methods, Mental Disorders psychology, Schools organization & administration, Students psychology
- Abstract
Aims: The purpose of this 1-year case study was to identify how School-Wide Positive Behavioral Interventions and Supports (SW-PBIS) can be adapted to meet the needs of students in alternative schools and to evaluate the early impact of SW-PBIS on discipline outcomes., Methods: Suggestions for adaptations are provided at each stage of the intervention process with a focus on buy-in, training, data collection, and resource allocation., Results: Data from this case study included information about key components of the implementation process as well as initial outcomes. Process data revealed the importance of stakeholder buy-in, training opportunities, and potential adaptations to the framework. Outcome data from the first year of implementation indicated that the number of incident reports did not significantly differ from the baseline; however, there was a reduction in defiance-related behaviors and an increase in on-task behaviors., Conclusion: This study contributes to the determination of the efficacy of SW-PBIS in a historically more punitive environment. Given the initial positive response and lessons learned, it is believed that, with the support of additional Tier 2 and Tier 3 interventions, SW-PBIS may be an appropriate framework to support students in alternative schools., (© 2019 Wiley Periodicals, Inc.)
- Published
- 2019
- Full Text
- View/download PDF
7. The effect of interactive digital interventions on physical activity in people with inflammatory arthritis: a systematic review.
- Author
-
Griffiths AJ, White CM, Thain PK, and Bearne LM
- Subjects
- Arthritis, Rheumatoid psychology, Follow-Up Studies, Humans, Randomized Controlled Trials as Topic, Spondylarthritis psychology, Arthritis, Rheumatoid complications, Exercise physiology, Quality of Life, Spondylarthritis complications
- Abstract
The aim of this systematic review was to evaluate the evidence from randomised controlled trials (RCTs) evaluating the effectiveness of interactive digital interventions (IDIs) for physical activity (PA) and health related quality of life (HRQoL) in people with Inflammatory Arthritis [rheumatoid arthritis (RA), juvenile idiopathic arthritis (JIA) axial Spondyloarthritis (AS) and psoriatic arthritis (PsA)]. Seven electronic databases identified published and unpublished studies. Two reviewers conducted independent data extraction and quality assessment using the Cochrane risk of bias tool (RoB). The primary outcome was change in objective PA after the intervention; secondary outcomes included self-reported PA and HRQoL after the intervention and objective or self-reported PA at least 1 year later. Five manuscripts, reporting four RCTs (three high and one low RoB) representing 492 (459 RA, 33 JIA) participants were included. No trials studying PsA or AS met the inclusion criteria. Interventions ranged from 6 to 52 weeks and included 3-18 Behaviour Change Techniques. Due to heterogeneity of outcomes, a narrative synthesis was conducted. No trials reported any significant between group differences in objective PA at end of intervention. Only one low RoB trial found a significant between group difference in self-reported vigorous [MD Δ 0.9 days (95% CI 0.3, 1.5); p = 0.004], but not moderate, PA in people with RA but not JIA. There were no between group differences in any other secondary outcomes. There is very limited evidence for the effectiveness of IDIs on PA and HRQoL in RA and JIA and no evidence for their effectiveness in PsA or AS.
- Published
- 2018
- Full Text
- View/download PDF
8. Mechanisms of phosphorus removal by cement-bound ochre pellets.
- Author
-
Littler J, Geroni JN, Sapsford DJ, Coulton R, and Griffiths AJ
- Subjects
- Adsorption, Mining, Phosphorus analysis, Water Pollutants, Chemical analysis, Construction Materials, Phosphorus chemistry, Water Pollutants, Chemical chemistry, Water Purification methods
- Abstract
Hydrous ferric oxide (here termed 'ochre') sludge, an abundant waste product produced from the treatment of acid mine drainage (AMD), was used in this study for the removal of phosphorus (in the form of phosphate ions) from contaminated waters. The phosphorus uptake capacities of both raw and pelletized AMD solids were compared using batch and column tests. Addition of a cement binder to the AMD solids during pellet production led to significantly increased P-loading of the resultant solids compared to the raw sludge. Additionally, the pellets were found to continue to remove P in tests up to 7 d in duration whereas the unbound AMD sludge appeared to approach equilibrium with phosphate solution after approximately 60 min of contact time. In line with previous studies P uptake by the AMD solids was found to be primarily via adsorption. By contrast calcium phosphate precipitation was found to be the dominant removal mechanism for the cement-bound ochre pellets with a relatively small proportion of removal attributable to the AMD solids. SEM-EDX analysis of the surface of used pellets showed a Ca:P molar ratio close to that of hydroxyapatite (HAP). Continuous column tests on these pellets showed a rapid decrease in P removal capacity by the pellets over time, attributable to the formation of a passivating HAP surface layer., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
9. A mutation in the Neurospora crassa actin gene results in multiple defects in tip growth and branching.
- Author
-
Virag A and Griffiths AJ
- Subjects
- Actins metabolism, Calcium metabolism, Cell Polarity, Cloning, Molecular, Cytochalasins pharmacology, Cytoplasm chemistry, Cytoplasmic Vesicles metabolism, Cytoskeletal Proteins genetics, Cytoskeletal Proteins physiology, Drug Resistance, Fungal genetics, Fungal Proteins genetics, Fungal Proteins physiology, Hyphae cytology, Hyphae growth & development, Morphogenesis genetics, Mutation, Neurospora crassa cytology, Selection, Genetic, Temperature, Actins genetics, Actins physiology, Genes, Fungal, Neurospora crassa genetics, Neurospora crassa growth & development
- Abstract
Actin has a pivotal function in hyphal morphogenesis in filamentous fungi, but it is not certain whether its function is equivalent to that of a morphogen, or if it is simply part of a mechanism that executes orders given by another regulatory entity. To address this question we selected for cytochalasin A resistance and isolated act1, the first actin mutant in Neurospora crassa. This mutant branches apically and shows an altered distribution of actin at the tip. Based on the properties of this mutant, we propose a model of tip growth and branching in which actin effects tip growth by regulating the rate of vesicle flow from proximal to distal regions of a hypha, thereby controlling the tip-high gradient of cytoplasmic calcium. The actin-controlled calcium gradient at the tip is necessary for maintenance of tip growth as well as the dominance of one polarized site at the hyphal tip. The phenotype of act1 indicates that actin controls the balance between lateral and apical branching.
- Published
- 2004
- Full Text
- View/download PDF
10. Interaction of mutations affecting tip growth and branching in Neurospora.
- Author
-
Gavric O and Griffiths AJ
- Subjects
- Cell Division, Crosses, Genetic, Genes, Lethal, Genotype, Models, Genetic, Neurospora crassa growth & development, Mutation, Neurospora crassa cytology, Neurospora crassa genetics
- Abstract
There are at least 100 loci encoding products that influence tip growth and branching in Neurospora crassa. The functional relationships between 38 of these loci were examined by an analysis of gene interaction in double mutants. A complex range of interactions was revealed. These have been grouped into full and partial epistasis, costasis, novel phenotypes, and synthetic lethality and sublethality. Epistasis was used to construct the simplest "pathway" that accommodated the results; this pathway was Y-shaped. If synthetic sublethality is interpreted to reflect mutations in the same pathway, the sublethal connections are compatible with the chart of epistasis. The gene interactions discovered represent candidates for future cell and molecular studies on the interaction of gene products in the control of tip growth and branching.
- Published
- 2003
- Full Text
- View/download PDF
11. An in depth study of the effects of socio-economic conditions on household waste recycling practices.
- Author
-
Emery AD, Griffiths AJ, and Williams KP
- Subjects
- Cost-Benefit Analysis, Demography, Environment, Geography, Guidelines as Topic, Humans, Local Government, Wales, Conservation of Natural Resources economics, Guideline Adherence, Household Products, Refuse Disposal economics
- Abstract
Waste is never consistent. Different areas use different materials, which give rise to waste streams that can vary widely in composition. With the increasing pressure on landfill operators and local governments over the amount and type of waste going to landfill, moves have to be taken to reduce, divert and recover materials. To undertake this function it is necessary to identify the composition of the waste stream. This paper contains the results of a household waste analysis conducted in a typical unitary authority of South Wales, a traditional industrial community. The waste analysis was conducted to determine whether there was a connection between an area's socio-economic standing and the quantities of waste produced. A selection of three different household categories were chosen, as described by the UK's ACORN geodemographical system. The three areas chosen were terracedd, council and semi-detached properties and were selected as they were the most dominant and easily recognised types of dwellings found in the study area. The results of the full waste analysis have been compared against a number of previous household waste characterisation studies.
- Published
- 2003
- Full Text
- View/download PDF
12. Ultrastructural changes in Neurospora cells undergoing senescence induced by kalilo plasmids.
- Author
-
Bok JW, Ishida K, and Griffiths AJ
- Abstract
In N. crassa and N. intermedia, the kalilo plasmid triggers senescence by insertion into mitochondrial DNA. To investigate the cell death pathway induced by this plasmid, juvenile and senescent subcultures of several senescent strains were examined by light and transmission electron microscopy, and at the DNA level. There were no signs of apoptotic events, such as shrinkage of the cytoplasm away from the cell wall, apoptotic bodies, internucleosomal DNA fragmentation or condensation of the cytoplasm while retaining mitochondria and endomembrane structure. Instead, swollen mitochondria lacking cristae and containing amorphous inclusions, and disruption of nuclear and mitochondrial membranes indicated a necrotic mode of cell death.
- Published
- 2003
13. Travel grants available for genetics congress.
- Author
-
Griffiths AJ
- Subjects
- Developing Countries, New South Wales, Congresses as Topic economics, Financing, Organized, Genetics economics, Research Personnel economics, Travel economics
- Published
- 2003
- Full Text
- View/download PDF
14. A review of the UK metals recycling industry.
- Author
-
Emery A, Williams KP, and Griffiths AJ
- Subjects
- Commerce, Economic Competition, Engineering, United Kingdom, Conservation of Natural Resources economics, Metals economics
- Abstract
This paper reviews the volatile nature of the price of recycled metals over the past decade and examines legislative and fiscal drivers that have affected the industry. Results from this study have shown that the UK scrap metals markets are presently seeing some of the lowest scrap prices for nearly a decade for both ferrous and non-ferrous metals, in many cases halving in value in less than a year. Scrap metals and other recycled materials prices were high in 1994-96, which have since fallen back to more traditional low levels. World recessions and the steady decline of the UK manufacturing and engineering sectors have effected prices. With tougher new Government legislation, such as the Climate Change Levy and the proposed End of Life Vehicles Directive, small and medium sized scrap merchants are finding it increasingly difficult to compete.
- Published
- 2002
- Full Text
- View/download PDF
15. Structure and function analysis of the calcium-related gene spray in Neurospora crassa.
- Author
-
Bok JW, Sone T, Silverman-Gavrila LB, Lew RR, Bowring FJ, Catcheside DE, and Griffiths AJ
- Subjects
- Amino Acid Sequence, Base Sequence, Chromosome Mapping, Cloning, Molecular, Electrophysiology, Fungal Proteins chemistry, Genetic Complementation Test, Membrane Potentials, Membrane Proteins chemistry, Membrane Proteins metabolism, Molecular Sequence Data, Neurospora crassa growth & development, Point Mutation, Sequence Analysis, DNA, Structure-Activity Relationship, Calcium metabolism, Fungal Proteins genetics, Fungal Proteins metabolism, Membrane Proteins genetics, Neurospora crassa genetics, Neurospora crassa metabolism
- Abstract
The spray gene was cloned, and wildtype and mutant alleles were sequenced. Spray(+) has a 3452-bp open reading frame plus seven introns. The spray mutant had a T --> G transversion close to the carboxyl end, creating a stop codon (TGA). The sequence shows no match to genes of known function, but the carboxyl end shows seven transmembrane domains and matches putative membrane proteins of yeast. The most abundant transcript detected was 4.4 kb in size. Repeat-induced point mutagenesis produced the mutant spray phenotype. Electrophysiological analysis showed that ion fluxes in the spray plasma membrane are normal; furthermore, whereas the spray mutant was known to have no organelle-based calcium fluorescence, the cytosol shows a tip-high calcium gradient. The spray mutant is sensitive to calcineurin inhibitors. The results suggest that the SPRAY protein is located in an organellar membrane, regulating the distribution of Ca(2+) via calcineurin., (Copyright 2001 Academic Press.)
- Published
- 2001
- Full Text
- View/download PDF
16. Tests of a cellular model for constant branch distribution in the filamentous fungus Neurospora crassa.
- Author
-
Watters MK and Griffiths AJ
- Subjects
- Culture Media, Models, Biological, Morphogenesis, Mutation, Neurospora crassa genetics, Photomicrography methods, Temperature, Neurospora crassa growth & development
- Abstract
The growth of mycelial fungi is characterized by the highly polarized extension of hyphal tips and the formation of subapical branches, which themselves extend as new tips. In Neurospora crassa, tip growth and branching are crucial elements for this saprophyte in the colonization and utilization of organic substrates. Much research has focused on the mechanism of tip extension, but a cellular model that fully explains the known phenomenology of branching by N. crassa has not been proposed. We described and tested a model in which the formation of a lateral branch in N. crassa was determined by the accumulation of tip-growth vesicles caused by the excess of the rate of supply over the rate of deposition at the apex. If both rates are proportional to metabolic rate, then the model explains the known lack of dependence of branch interval on growth rate. We tested the model by manipulating the tip extension rate, first by shifting temperature in both the wild type and hyperbranching (colonial) mutants and also by observing the behavior of both tipless colonies and colonyless tips. We found that temperature shifts in either direction result in temporary changes in branching. We found that colonyless tips also pass through a temporary transition phase of branching. The tipless colonies produced a cluster of new tips near the point of damage. We also found that branching in colonial mutants is dependent on growth rate. The results of these tests are consistent with a model of branching in which branch initiation is controlled by the dynamics of tip growth while being independent of the actual rate of this growth.
- Published
- 2001
- Full Text
- View/download PDF
17. Possible benefits of kalilo plasmids to their Neurospora hosts.
- Author
-
Bok JW and Griffiths AJ
- Subjects
- Adaptation, Physiological drug effects, DNA, Fungal physiology, DNA, Mitochondrial physiology, Drug Resistance, Microbial, Hydrogen-Ion Concentration, Metals, Heavy pharmacology, Neurospora drug effects, Neurospora growth & development, Neurospora metabolism, Temperature, Adaptation, Physiological genetics, Neurospora genetics, Plasmids physiology
- Abstract
Neurospora mitochondrial plasmids are ubiquitous in natural populations, yet many of them are lethal to their host strains or seem to impose a molecular genetic load. Five pairs of strains of Neurospora tetrasperma and N. crassa with and without kalilo-like plasmids were tested under a variety of situations. The purpose was to find possible beneficial effects of plasmids that might offset their disadvantages. We found that, in all cases tested, plasmids conferred an advantage to growth at temperatures close to the top of the range for this fungus. Also, the plasmids improved fertility, as measured by perithecial production. Negative results were obtained for heavy metal resistance and ascospore germination. The results generate the hypothesis that plasmids may have adaptive significance to their hosts., (Copyright 2000 Academic Press.)
- Published
- 2000
- Full Text
- View/download PDF
18. Kalilo plasmids are a family of four distinct members with individual global distributions across species.
- Author
-
He C, Nastasja de Groot, Bok JW, and Griffiths AJ
- Subjects
- Base Sequence, DNA Probes genetics, DNA, Fungal genetics, Genetic Variation genetics, Molecular Sequence Data, Molecular Weight, Neurospora classification, Open Reading Frames genetics, Phylogeny, Plasmids chemistry, Sequence Alignment, Sequence Deletion genetics, Sequence Homology, Nucleic Acid, Species Specificity, Terminal Repeat Sequences genetics, Multigene Family genetics, Neurospora genetics, Plasmids classification, Plasmids genetics
- Abstract
Kalilo is a linear 9-kb plasmid, isolated originally from Hawaiian strains of the heterothallic fungus Neurospora intermedia. Its properties include terminal inverted repeats, two ORFs coding for a presumptive DNA and an RNA polymerase, and the ability to cause senescence in its original host and in the closely related species Neurospora crassa. We have examined natural isolates alleged to contain plasmids homologous to kalilo. Most of these isolates do in fact contain plasmids with so close an identity to kalilo as to be certain relatives. We found a new case of kalilo in Neurospora tetrasperma from Moorea-Tahiti, and a new case of LA-kalilo (previously found only in N. tetrasperma) in N. crassa from Haiti. A previously unreported, substantially shorter, kalilo variant has been found in three geographically separate isolates of the heterothallic species Neurospora discreta. Therefore, if the previously reported kalilo variant from the genus Gelasinospora is included, in all there are four members of the kalilo plasmid family. The main differences between these plasmids are in the terminal inverted repeats (TIRs). The phylogeny of the TIR sequences is largely congruent with that of nuclear DNA in the species in which they are found, suggesting that the plasmids are related by vertical descent throughout the evolution of these species. However, there are two cases of a plasmid found in a heterothallic and a pseudohomothallic species in the same global area; these cases might have arisen from more recent horizontal transmission or introgression.
- Published
- 2000
- Full Text
- View/download PDF
19. The frost gene of Neurospora crassa is a homolog of yeast cdc1 and affects hyphal branching via manganese homeostasis.
- Author
-
Sone T and Griffiths AJ
- Subjects
- Amino Acid Sequence, Base Sequence, Calcineurin metabolism, Calcineurin Inhibitors, Cell Cycle Proteins metabolism, Cloning, Molecular, Culture Media, Drug Resistance, Microbial, Fungal Proteins chemistry, Fungal Proteins metabolism, Manganese pharmacology, Molecular Sequence Data, Neurospora crassa drug effects, Neurospora crassa genetics, Polymorphism, Restriction Fragment Length, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Signal Transduction, Transformation, Genetic, Cell Cycle Proteins genetics, Fungal Proteins genetics, Genes, Fungal genetics, Homeostasis, Manganese metabolism, Neurospora crassa growth & development, Saccharomyces cerevisiae Proteins
- Abstract
The Neurospora crassa mutant frost has a hyperbranching phenotype that can be corrected by adding Ca(2+), suggesting that characterization of this gene might clarify the mechanism of Ca(2+)-dependent tip growth. The wild-type allele was cloned by sib selection using protoplasts from arthroconidia. RFLP analysis revealed that the cloned DNA fragment mapped to the fr locus. The nucleotide sequence of genomic and cDNA was determined. The deduced amino acid sequence showed homology to the Saccharomyces cerevisiae CDC1 protein, implicated in manganese homeostasis. The fr mutant was sensitive to Mn(2+), and a revertant allele whose product differs by one amino acid was tolerant to Mn(2+). Mn(2+) depletion induced the wild-type strain to hyperbranch, resulting in a morphology similar to that of fr. The fr mutant was also sensitive to calcineurin inhibitors. These results suggest that fr is involved in Mn(2+) homeostasis and point to a role for Mn(2+) in Neurospora branching., (Copyright 1999 Academic Press.)
- Published
- 1999
- Full Text
- View/download PDF
20. Transfer of Neurospora kalilo plasmids among species and strains by introgression.
- Author
-
Bok JW, He C, and Griffiths AJ
- Subjects
- Base Sequence, DNA Primers genetics, DNA, Fungal genetics, DNA, Mitochondrial genetics, Gene Transfer Techniques, Neurospora crassa genetics, Species Specificity, Neurospora genetics, Plasmids genetics
- Abstract
There are four different variants of the kalilo "family" of linear mitochondrial plasmids. This family is found in several heterothallic species and one pseudohomothallic species of Neurospora, as well as in one homothallic species of Gelasinospora. The mode of dispersal of these plasmids is not known. Horizontal transmission has proved difficult to demonstrate. Another possibility is transfer by introgression, and this is modelled in the present paper. We have used introgression and subsequent heterokaryosis to successfully transfer the LA-kalilo plasmid from a Haitian strain of Neurospora crassa to the standard Oak Ridge N. crassa background, the LA-kalilo plasmid from the pseudohomothallic Neurospora tetrasperma to N. crassa, and the kalilo plasmid from N. crassa to N. tetrasperma. Thus, introgression is shown to be a possible avenue of dispersal between species. The recipient strains were all senescent but the mechanism of this senescence is not known. It could be caused by the plasmids, but if so the mechanism is novel since plasmid/mtDNA junction fragments of the type found in the standard mode of mtDNA insertion could not be detected. However, mtDNA changes were observed in the senescent recipients.
- Published
- 1999
- Full Text
- View/download PDF
21. hcf5, a nuclear photosynthetic electron transport mutant of Arabidopsis thaliana with a pleiotropic effect on chloroplast gene expression.
- Author
-
Dinkins RD, Bandaranayake H, Baeza L, Griffiths AJ, and Green BR
- Subjects
- Arabidopsis genetics, Cell Nucleus metabolism, Cytochrome b Group genetics, Cytochrome b Group metabolism, Cytochrome b6f Complex, Electron Transport, Genes, Plant, Light-Harvesting Protein Complexes, Operon, Photosynthetic Reaction Center Complex Proteins genetics, Photosynthetic Reaction Center Complex Proteins metabolism, Photosystem I Protein Complex, Photosystem II Protein Complex, RNA, Plant metabolism, Ribulose-Bisphosphate Carboxylase biosynthesis, Ribulose-Bisphosphate Carboxylase genetics, Transcription, Genetic, Arabidopsis metabolism, Chloroplasts metabolism, Gene Expression Regulation, Plant, Mutation, Photosynthesis genetics
- Abstract
A photosynthetic mutant of Arabidopsis thaliana, hcf5, was isolated by screening M2 seedlings for high chlorophyll fluorescence. Thylakoid morphology was strikingly abnormal, with large grana stacks and almost no stroma lamellae. Fluorescence induction kinetics, activity assays, and immunoblotting showed that photosystem II was absent. Polypeptides of the photosystem I complex, the Cyt b6/f complex, coupling factor, and the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase were also severely depleted. However, the nuclear-encoded chlorophyll a/b light-harvesting complex polypeptides were unaffected. The rbcL transcript was present at very low levels, the pattern of transcripts from the polycistronic psbB-psbH-petB-petD operon was abnormal, and the mature psbH message was almost completely lacking. This suggests that the hcf5 locus may encode a product required for the correct expression of several chloroplast genes.
- Published
- 1997
- Full Text
- View/download PDF
22. Genetics and ethics in China.
- Author
-
Griffiths AJ
- Subjects
- Bioethics, China, Humans, Internationality, Eugenics legislation & jurisprudence, Genetics, Medical
- Published
- 1996
- Full Text
- View/download PDF
23. The molecular nature of mutations in the mt A-1 gene of the Neurospora crassa A idiomorph and their relation to mating-type function.
- Author
-
Saupe S, Stenberg L, Shiu KT, Griffiths AJ, and Glass NL
- Subjects
- Alleles, Amino Acid Sequence, Gene Deletion, Molecular Sequence Data, Mutation, Open Reading Frames, Transcription, Genetic, Transformation, Genetic, Fungal Proteins genetics, Genes, Fungal, Genes, Mating Type, Fungal, Neurospora crassa genetics
- Abstract
The 293-amino acid mt A-1 ORF of the A mating-type idiomorph of Neurospora crassa is multifunctional. It confers A mating identity and is responsible for heterokaryon incompatibility. The goal of this study was to dissect the functional regions of mt A-1. New mutants of mt A-1 selected for loss of the incompatibility function were obtained. One new mutant, A(m)99, was partially fertile as a maternal parent. This is the first time that fertility and incompatibility functions have been separated for the A idiomorph. In this mutant, the mt A-1 ORF is truncated after the first 85 amino acids, indicating that this N-terminal region is minimally sufficient for female fertility. A series of deletion constructs and frameshift alleles of mt A-1 was obtained and tested for male-mating activity and vegetative incompatibility in transformation experiments. These experiments showed that a region from position 1 to 111 is sufficient to confer incompatibility, while amino acids from position 1 to 227 are required for mating activity. A transcriptional analysis of mt A-1 showed that the mRNA is expressed both before and after fertilization. This, together with the phenotype of the A(m)99 mutant, suggests a post-fertilization function for mt A-1.
- Published
- 1996
- Full Text
- View/download PDF
24. Structure of a Gelasinospora linear plasmid closely related to the kalilo plasmid of Neurospora intermedia.
- Author
-
Yuewang W, Yang X, and Griffiths AJ
- Subjects
- Amino Acid Sequence, Ascomycota growth & development, Ascomycota physiology, Base Sequence, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Mitochondrial chemistry, DNA, Mitochondrial genetics, Louisiana, Molecular Sequence Data, Neurospora genetics, Neurospora growth & development, Neurospora physiology, Open Reading Frames, Repetitive Sequences, Nucleic Acid, Restriction Mapping, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Soil Microbiology, Ascomycota genetics, Plasmids chemistry, Plasmids genetics
- Abstract
We have determined the complete nucleotide sequence of a linear mitochondrial plasmid from a natural isolate of a homothallic species of Gelasinospora. The plasmid genome is 8231 bp long. It carries terminal inverted repeats of 1137 bp. Extending inwards from the terminal repeats are two long open reading frames coding for putative proteins with similarity to DNA and RNA polymerases. These are separated by a short intergenic region. The plasmid sequence shows remarkable similarity to that of the Neurospora intermedia senescence-plasmid kalilo. Overall the two plasmids have a similar genetic organization and are clearly homologous at the sequence level. The main differences are in the intergenic region and in the terminal repeats.
- Published
- 1996
25. The dynamics of mitochondrial plasmids in a Hawaiian population of Neurospora intermedia.
- Author
-
Debets F, Yang X, and Griffiths AJ
- Subjects
- Crosses, Genetic, DNA, Circular genetics, Hawaii, Models, Genetic, Neurospora physiology, DNA, Mitochondrial genetics, Gene Frequency, Genetics, Population, Neurospora genetics, Plasmids genetics
- Abstract
We analysed the distribution of mitochondrial plasmids among 82 Neurospora intermedia isolates from Hawaii; 74% of the isolates carried the neutral circular plasmid Han-2, whereas 38% contained the linear senescence-causing plasmid kalDNA. The distributions of the two plasmids are independent. There is no significant difference between the Kauaian population of 1972 and that of 1976. To further examine the reasons for this frequency distribution we studied the transmission of both Hawaiian plasmids through the maternal parent in a large series of crosses using non-Kalilo isolates as conidial parents. Plasmids can be lost during the sexual cycle. The Han-2 plasmid is transmitted more efficiently than kalDNA. No clear cases of autonomous or non-autonomous plasmid suppression were observed, so loss can be considered accidental. One Kalilo strain proved to be ineffectual as a maternal parent, and this reduced its ability to transmit kalDNA to the next generation. The dynamic balance of plasmids in natural populations over time is probably a result of the interplay of many forces, including those described in this work and those from several other studies on Neurospora plasmids.
- Published
- 1995
- Full Text
- View/download PDF
26. Natural plasmids of filamentous fungi.
- Author
-
Griffiths AJ
- Subjects
- Biological Evolution, DNA Replication, DNA, Fungal physiology, Gene Rearrangement, Mitochondria genetics, Mutagenesis, Phenotype, Plasmids physiology, Plasmids ultrastructure, Ascomycota genetics, DNA, Fungal genetics, Plasmids genetics
- Abstract
Among eukaryotes, plasmids have been found in fungi and plants but not in animals. Most plasmids are mitochondrial. In filamentous fungi, plasmids are commonly encountered in isolates from natural populations. Individual populations may show a predominance of one type, but some plasmids have a global distribution, often crossing species boundaries. Surveys have shown that strains can contain more than one type of plasmid and that different types appear to be distributed independently. In crosses, plasmids are generally inherited maternally. Horizontal transmission is by cell contact. Circular plasmids are common only in Neurospora spp., but linear plasmids have been found in many fungi. Circular plasmids have one open reading frame (ORF) coding for a DNA polymerase or a reverse transcriptase. Linear plasmids generally have two ORFs, coding for presumptive DNA and RNA polymerases with amino acid motifs showing homology to viral polymerases. Plasmids often attain a high copy number, in excess of that of mitochondrial DNA. Linear plasmids have a protein attached to their 5' end, and this is presumed to act as a replication primer. Most plasmids are neutral passengers, but several linear plasmids integrate into mitochondrial DNA, causing death of the host culture. Inferred amino acid sequences of linear plasmid ORFs have been used to plot phylogenetic trees, which show a fair concordance with conventional trees. The circular Neurospora plasmids have replication systems that seem to be evolutionary intermediates between the RNA and the DNA worlds.
- Published
- 1995
- Full Text
- View/download PDF
27. Recombination between heterologous linear and circular mitochondrial plasmids in the fungus Neurospora.
- Author
-
Griffiths AJ and Yang X
- Subjects
- Base Sequence, DNA, Fungal chemistry, DNA, Mitochondrial chemistry, Molecular Sequence Data, Nucleic Acid Conformation, Open Reading Frames, Restriction Mapping, Species Specificity, DNA, Fungal genetics, DNA, Mitochondrial genetics, Neurospora genetics, Plasmids chemistry, Recombination, Genetic
- Abstract
A strain of Neurospora intermedia from China contains five prominent extragenomic mitochondrial plasmids: three linear elements called zhisi plasmids, and two circular plasmids, Harbin-1 and -2. In one subculture, levels of four plasmids (all three zhisis and Harbin-1) fell to undetectable values and two novel linear plasmids appeared, Harbin-L and -L2, as well as a new small circular plasmid, Harbin-0.9. Cross-hybridization of restriction fragments and DNA sequencing showed that the Harbin-L plasmid was composed of parts of the circular Harbin-1 plasmid and of one of the linear zhisi plasmids. A model is presented in which the Harbin-1 and zhisi plasmids are present within the same mitochondrion, and crossovers at two separate 7 bp sites of sequence identity effectively insert part of the circular Harbin-1 DNA into a zhisi linear plasmid, simultaneously deleting part of the zhisi element. The small plasmid Harbin-0.9 is a fragment of the Har-1 plasmid, and seems to be another product of the recombination process that created Har-L. Recombination of this type could have contributed to the wide array of mitochondrial plasmids found in natural populations of Neurospora.
- Published
- 1995
- Full Text
- View/download PDF
28. A kalilo-like linear plasmid in Louisiana field isolates of the pseudohomothallic fungus Neurospora tetrasperma.
- Author
-
Marcinko-Kuehn M, Yang X, Debets F, Jacobson DJ, and Griffiths AJ
- Subjects
- Biological Evolution, Crosses, Genetic, Louisiana, Models, Genetic, Neurospora growth & development, Neurospora isolation & purification, Restriction Mapping, Species Specificity, DNA, Fungal genetics, Neurospora genetics, Plasmids genetics
- Abstract
Two Louisiana strains of Neurospora tetrasperma contain a linear plasmid (LA-kalDNA) with a restriction map identical to the Hawaiian Neurospora intermedia senescence plasmid, kalDNA, but with termini 100 nucleotide pairs shorter. One of these strains also bore a circular plasmid similar to the Hawaiian circular plasmid Hanalei-2. One species probably acquired both plasmids from the other by horizontal transfer, at a time sufficiently distant for sequence divergence to take place. Many LA-kalDNA-bearing derivative strains senesced, but this plasmid does not guarantee senescence. Furthermore, LA-kalDNA does not insert into mtDNA. One senescent strain showed no LA-kalDNA. The plasmids are effectively transmitted via the pseudohomothallic sexual cycle. Single mating-type derivatives transmit plasmids maternally.
- Published
- 1994
- Full Text
- View/download PDF
29. Vegetative incompatibility in Neurospora: its effect on horizontal transfer of mitochondrial plasmids and senescence in natural populations.
- Author
-
Debets F, Yang X, and Griffiths AJ
- Subjects
- Crosses, Genetic, Gene Transfer, Horizontal, Genes, Fungal, Genes, Mating Type, Fungal, Genotype, Neurospora crassa genetics, Neurospora crassa growth & development, Phenotype, Species Specificity, Mitochondria metabolism, Neurospora crassa physiology, Plasmids
- Abstract
We have investigated the horizontal transfer of two mitochondrial plasmids and the Kalilo senescence phenotype in the fungus Neurospora without the use of heterokaryon-forcing markers. The Kalilo senescent state was only transferred between fully-compatible N. crassa strains, but not between strains differing at any of the loci het-c, het-d, het-e or mating-type. However, the linear plasmid kalDNA and the circular plasmid Han-2 were transferred following incompatible vegetative interactions. Our data suggest that vegetative incompatibility due to allelic differences at het-c is more effective in preventing transfer than that due to het-d, het-e or mating-type. Based on these observations we have developed a novel test for assessing vegetative incompatibility between Kalilo and non-Kalilo field isolates of N. intermedia. In this procedure combinations of Kalilo and non-Kalilo field isolates of N. intermedia were grown together and tested for senescence. Compatibility is inferred if the young non-Kalilo strain dies along with the senescent Kalilo strain, whereas incompatibility is inferred when the Kalilo strain dies without imposing its senescent state onto the non-Kalilo strain. Our results suggest that each of the nine Kalilo strains tested is incompatible with each of 20 non-Kalilo isolates from the same N. intermedia population of the Hawaiian island of Kauai. However, the observed incompatibility did not completely prevent cytoplasmic exchange, and in several cases plasmid transfer could be detected.
- Published
- 1994
- Full Text
- View/download PDF
30. New mutations that suppress mating-type vegetative incompatibility in Neurospora crassa.
- Author
-
Vellani TS, Griffiths AJ, and Glass NL
- Subjects
- Alleles, Crosses, Genetic, Genetic Linkage genetics, Neurospora crassa growth & development, Reproduction, Asexual, Genes, Fungal genetics, Genes, Mating Type, Fungal, Genes, Suppressor genetics, Mutation genetics, Neurospora crassa genetics
- Abstract
The mating-type locus in the ascomycete Neurospora crassa functions as a vegetative-incompatibility locus during asexual growth such that A+a heterokaryons and A/a partial diploids are inhibited in their growth. In this study, we sought mutations that suppress mating-type associated vegetative incompatibility by using A/a partial diploids. Mutants were selected as spontaneous escapes from inhibited growth. Suppressors were identified by selecting escapes that retained the capacity to mate with both A and a strains. The escaped partial diploids were then outcrossed to remove the duplication. Seven suppressors were identified that segregated as single, recessive mutations. All seven of the suppressors were shown to be allelic to a previously obtained suppressor, tol, by segregation analyses and heterokaryon tests. This result indicates that all seven mutations are new alleles of tol and suggests that tol is a key regulatory locus in the expression of mating-type associated vegetative incompatibility in N. crassa.
- Published
- 1994
- Full Text
- View/download PDF
31. A nuclear photosynthetic electron transport mutant of Arabidopsis thaliana with altered expression of the chloroplast petA gene.
- Author
-
Dinkins RD, Bandaranayake H, Green BR, and Griffiths AJ
- Subjects
- Apoproteins genetics, Carotenoids metabolism, Cell Nucleus, Chlorophyll chemistry, Cytochromes genetics, Cytochromes f, Fluorescence, Intracellular Membranes chemistry, Mutation, Plant Proteins genetics, RNA, Messenger biosynthesis, beta Carotene, Apoproteins biosynthesis, Arabidopsis genetics, Chloroplasts chemistry, Cytochromes biosynthesis, Electron Transport genetics, Gene Expression Regulation, Genes, Plant, Photosynthesis genetics, Plant Proteins biosynthesis
- Abstract
The nuclear photosynthetic mutant, hcf2, of Arabidopsis thaliana was isolated by screening M2 seedlings for abnormally-high chlorophyll fluorescence (hcf), indicative of a block in photosynthetic electron transport. Fluorescence induction kinetics, photosynthetic electron transport activity assays and immunoblotting revealed that all the complexes involved in photosynthetic electron transport were affected to some extent. The most striking effect of the mutation was on the relative steady state levels of the petA transcript (encoding the apoprotein of cytochrome f) which were more than five-times higher in the mutant plants than in their wild-type siblings.
- Published
- 1994
- Full Text
- View/download PDF
32. Forearm substrate utilization during exercise after a meal containing both fat and carbohydrate.
- Author
-
Griffiths AJ, Humphreys SM, Clark ML, and Frayn KN
- Subjects
- Adult, Blood Glucose metabolism, Fatty Acids, Nonesterified blood, Female, Forearm blood supply, Humans, Insulin blood, Ketone Bodies blood, Male, Middle Aged, Oxygen Consumption drug effects, Regional Blood Flow, Triglycerides blood, Dietary Carbohydrates administration & dosage, Dietary Fats administration & dosage, Exercise physiology
- Abstract
1. Whilst the provision of exogenous carbohydrate has been shown to be beneficial to endurance exercise performance, little attention has been paid to the possibility of dietary manipulation of the availability of fat. 2. Ten normal subjects were studied on two occasions: after an overnight fast (postabsorptive state) and after a meal containing 80 g of fat and 80 g of carbohydrate (fed state). Forearm substrate exchange was studied during 60 min of isometric forearm exercise (5 s contraction, 5 s relaxation). 3. In the fed state concentrations of plasma triacylglycerol (1510 +/- 150 versus 850 +/- 80 mumol/l, P < 0.01), blood ketone bodies (151 +/- 21 versus 80 +/- 10 mumol/l, P < 0.01) and plasma insulin (17 +/- 3 versus 7 +/- 1 m-units/l, P < 0.01) were elevated compared with the postabsorptive state; plasma glucose and non-esterified fatty acid concentrations were not significantly different. 4. Forearm blood flow and O2 consumption each increased about 6-fold during exercise, with no differences between the two nutritional states. The potential contribution of individual substrates to forearm O2 consumption (a calculation which is independent of blood flow) was assessed: for triacylglycerol it was significantly greater in the fed state (P < 0.01). The sum of the potential contributions of triacylglycerol, non-esterified fatty acids, glucose and ketone bodies to forearm O2 consumption was significantly greater, both before and during exercise, in the fed than in the postabsorptive state (P < 0.05), implying the sparing of endogenous (forearm) fuels. 5. These studies highlight the potential for manipulation of substrate supply during exercise by feeding meals containing both carbohydrate and fat.
- Published
- 1994
- Full Text
- View/download PDF
33. Plasmid suppressors active in the sexual cycle of Neurospora intermedia.
- Author
-
Yang X and Griffiths AJ
- Subjects
- Crosses, Genetic, Neurospora genetics, Reproduction genetics, Neurospora physiology, Plasmids
- Abstract
We have discovered that, in certain crosses of natural isolates of Neurospora intermedia, linear and circular mitochondrial plasmids of the maternal parent are not transmitted to the progeny. This contrasts with the maternal transmission of organellar genetic elements generally observed in crosses between laboratory strains and between other natural isolates. Formally, failure of plasmid transmission is a type of plasmid suppression. The present cases represent the first report of plasmid suppressors in natural populations of fungi. Strains used as female parents can transmit or not transmit plasmids depending on the strain used as male parent. Males that act to suppress in one cross fail to suppress in others. Therefore, the suppression of plasmids depends on a strain-specific interaction and is not determined exclusively by the males. Since suppression is a specific interaction we inferred that it must be genetically based and tested this hypothesis by seeking segregation of suppressed and nonsuppressed phenotypes in octads. Segregation of the original full suppression of all plasmids was indeed observed in each of the three sets of testcrosses examined. The interaction type of suppression must be initiated in ascogenous tissue during the sexual cycle. It is a nonautonomous type of suppression, affecting all descendent cells. In any one case of suppression, either one, several, or all plasmids can be lost. Both linear and circular plasmids can be eliminated by the same suppressor genotype. In addition, several strains were found to contain suppressors that act after ascospore delineation. This autonomous type of suppression has been observed previously in laboratory strains, but not in natural isolates. All the cases of plasmid suppression identified in this study involved a range of apparently neutral circular and linear plasmids. Using one senescent Kalilo strain of N. intermedia, we did not detect any case of suppression of the senescence-determining linear plasmid kalDNA.
- Published
- 1993
- Full Text
- View/download PDF
34. Male transmission of linear plasmids and mitochondrial DNA in the fungus Neurospora.
- Author
-
Yang X and Griffiths AJ
- Subjects
- Crosses, Genetic, Polymorphism, Restriction Fragment Length, DNA, Fungal genetics, DNA, Mitochondrial genetics, Neurospora genetics, Plasmids, Transformation, Genetic
- Abstract
One of the general rules of heredity is that in anisogamous matings genetic elements in organelles are inherited maternally. Nevertheless, there are cases of paternal transmission, both as rare exceptions, and as regular modes of inheritance. We report two new cases of paternal transmission in crosses of the model fungus Neurospora. First, we show leakage of a linear plasmid from males, the first case in fungi and the second in eukaryotes. Transmission frequencies ranged from 1% to 15% in different crosses, but some crosses showed no detectable male transmission. Second, we show leakage of male mitochondrial DNA (mtDNA), the second case in fungi. Some of the resulting progeny have only the male mtDNA type, but some are heteroplasmons. Heteroplasmons show novel restriction fragments attributable to recombination or rearrangement. Heteroplasmy of mtDNA through male transmission has not been reported previously in any eukaryote. In addition we have shown paternal leakage of circular mitochondrial plasmids, supporting another reported case. In a male bearing a linear and a circular plasmid, these plasmids and the mtDNA are transmitted in different combinations. These results show a potential for mitochondrial segregation and assortment during the sexual cycle in anisogamous fungi, pointing to more potential avenues for novel associations between genomic compartments, and between genomic and extragenomic elements.
- Published
- 1993
- Full Text
- View/download PDF
35. Transcription of the kalilo linear senescence plasmid from Neurospora intermedia.
- Author
-
Vickery DB and Griffiths AJ
- Subjects
- Base Sequence, Blotting, Northern, Cell Death, DNA-Directed RNA Polymerases metabolism, Fungal Proteins metabolism, Mitochondria, Molecular Sequence Data, RNA, Fungal biosynthesis, RNA, Messenger biosynthesis, Restriction Mapping, Sequence Homology, Nucleic Acid, DNA, Fungal genetics, DNA, Mitochondrial genetics, Neurospora genetics, Plasmids genetics, Transcription, Genetic
- Abstract
The 8.6-kb kalilo linear mitochondrial plasmid of Neurospora intermedia was found to give rise to multiple transcripts of 8.6, 4.4, 4.0, 1.3, 1.2, and 0.9 kb. Plasmid transcripts were found in all the developmental stages tested and were present in cells with and without plasmid integration into mtDNA. The 4.4- and 4.0-kb transcripts corresponded to the two known ORFs in size, position, and polarity. An analysis of RNA fractions has confirmed the mitochondrial location of kalilo. The kalilo-specific RNA appears to be selectively unstable in affected strains of N. intermedia; this may be a general property of linear plasmid RNA. Transcripts are most likely initiated from near the termini of the linear plasmid. Primer extension and sequencing showed a clear 5' RNA end at nucleotide 101. However, the sequence in this region does not show homology with any known mitochondrial, plasmid, or nuclear promoter. The sequence does show homology with the tip of the plasmid and marks the border of a long series of direct repeats. Possibly the plasmid RNA polymerase may be bifunctional, recognizing sequences at the plasmid tip as well as the promoter.
- Published
- 1993
- Full Text
- View/download PDF
36. Plasmid diversity in senescent and nonsenescent strains of Neurospora.
- Author
-
Yang X and Griffiths AJ
- Subjects
- DNA, Circular genetics, DNA, Fungal genetics, Neurospora crassa genetics, Plasmids isolation & purification, Restriction Mapping, Time Factors, Genetic Variation genetics, Mitochondria physiology, Neurospora genetics, Plasmids genetics
- Abstract
A sample of 171 natural isolates of Neurospora crassa and Neurospora intermedia was tested for senescence. Of these, 28 strains senesced within the duration of the experiment. These senescent strains, together with a selection of nonsenescent strains, were examined for the presence of mitochondrial plasmids. This was done by digesting mitochondrial DNA preparations with proteinase K, and running these samples on agarose gels. Most of the strains examined, both senescent and nonsenescent, contained plasmids, many of them new. Some new plasmids were linear, as inferred from their resistance to 5' exonuclease and sensitivity to 3' exonuclease. New circular plasmids were also found. Some strains carry several plasmids, and mixtures of circular and linear elements were common. A cross-homology study was performed on a sample of plasmid-bearing strains, and several cases of apparent relatedness were found, some between strains from distant geographical locations. Linear plasmids homologous to the maranhar linear senescence plasmid were quite common. A new member of the LaBelle circular plasmid homology group was found. In the sample tested for homology, no strains contained elements related to the kalilo linear senescence plasmid. The relationship of the new plasmids to senescence is not known. In addition to plasmid monomers, several different types of derivatives were found. The kalilo linear plasmid was found to occur in linear and circular forms of low mobility, presumed to be giant concatamers, and, in some strains, variant sibling structures and ladders of short derivatives were found. Circular plasmids also gave rise to extensive ladders on electrophoresis, probably representing different relaxation states and head-to-tail concatameric series. Some such forms migrated more slowly than mitochondrial DNA. One unique type of plasmid modification observed was a pair of linear elements that had apparently arisen de novo which showed homology to a circular plasmid.
- Published
- 1993
- Full Text
- View/download PDF
37. What does the public really need to know about genetics?
- Author
-
Griffiths AJ
- Subjects
- Genetic Diseases, Inborn genetics, Humans, Sociology, Genetics education
- Published
- 1993
38. Suppression of cytoplasmic senescence in Neurospora.
- Author
-
Griffiths AJ, Xiao Y, Barton R, and Myers C
- Subjects
- Cytoplasm metabolism, DNA, Mitochondrial genetics, Mutation genetics, Neurospora physiology, Spores, Fungal genetics, Genes, Fungal genetics, Genes, Suppressor genetics, Neurospora genetics, Plasmids genetics, Suppression, Genetic genetics
- Abstract
We have shown that senescence in Kalilo strains of Neurospora, caused by a linear mitochondrial plasmid called kalDNA, is suppressible by existing variants of the nuclear genome. The suppressors are manifested by 4:4 segregation of senescence and immortality in asci from crosses between senescent female strains and males chosen from non-senescent candidate stocks. In one case of suppression, the asci also show segregation at the plasmid level. There is a reduction of kalDNA to barely detectable levels in the four ascospores showing immortality, so this suppressor evidently influences the maintenance of the plasmid itself. In the other case of suppression, the phenotypic segregation is not correlated with segregation at the plasmid level, and all eight ascospores in the asci show both free and inserted forms of kalDNA. This suggests that the suppression genotype provides a way of tolerating the presence of the plasmid rather than diminishing it. However, the allele f, which provides an analogous kind of suppression for the cytoplasmic mutation poky, does not suppress Kalilo or Maranhar senescence. Suppression is hence shown to be a possible option for host strains to combat the plasmid in nature, but no examples of suppressors were found in a limited survey of natural isolates. In addition, we have shown that long-lived, presumably non-senescent, strains do not arise by suppressor mutation, but lose senescence plasmid DNA by another mechanism.
- Published
- 1992
- Full Text
- View/download PDF
39. Fungal senescence.
- Author
-
Griffiths AJ
- Subjects
- Ascomycota genetics, Ascomycota growth & development, Aspergillus genetics, Aspergillus growth & development, DNA, Fungal genetics, DNA, Mitochondrial genetics, Fungi growth & development, Neurospora genetics, Neurospora growth & development, Plasmids, Fungi genetics
- Published
- 1992
- Full Text
- View/download PDF
40. A new senescence-inducing mitochondrial linear plasmid in field-isolated Neurospora crassa strains from India.
- Author
-
Court DA, Griffiths AJ, Kraus SR, Russell PJ, and Bertrand H
- Subjects
- Base Sequence, DNA Transposable Elements, DNA, Fungal isolation & purification, DNA, Fungal physiology, DNA, Mitochondrial isolation & purification, India, Molecular Sequence Data, Neurospora crassa growth & development, Neurospora crassa isolation & purification, Repetitive Sequences, Nucleic Acid, Restriction Mapping, DNA, Mitochondrial physiology, Neurospora crassa genetics, Plasmids
- Abstract
Several field-collected strains of Neurospora crassa from the vicinity or Aarey, Bombay, India, are prone to precocious senescence and death. Analysis of one strain, Aarely-1e, demonstrated that the genetic determinants for the predisposition to senescence are maternally inherited. The senescence-prone strains contain a 7-kb, linear, mitochondrial DNA plasmid, maranhar, which is not present in long-lived isolates from the same geographical location. The maranhar plasmid has inverted terminal repeats with protein covalently bound at the 5' termini. Molecular hybridization experiments have demonstrated no substantial DNA sequence homology between the plasmid and the normal mitochondrial (mtDNA) and nuclear genomes of long-lived strains of N. crassa. Integrated maranhar sequences were detected in the mtDNAs of two cultures derived from Aarey-1e, and mtDNAs with the insertion sequences accumulated during subculturing. Nucleotide sequence analysis of cloned fragments of the two insertion sequences demonstrates that they are flanked by long inverted repeats of mtDNA. The senescence syndrome of the maranhar strains, and the mode of integration of the plasmid, are reminiscent of those seen in the kalilo strains of N. intermedia. Nonetheless, there is no detectable nucleotide sequence homology between the maranhar and kalilo plasmids.
- Published
- 1991
- Full Text
- View/download PDF
41. Mitochondrial variants of Neurospora intermedia from nature.
- Author
-
Rieck A, Griffiths AJ, and Bertrand H
- Subjects
- Crosses, Genetic, Cytochromes analysis, DNA Restriction Enzymes, Deoxyribonuclease EcoRI, Mitochondria analysis, Neurospora physiology, Neurospora ultrastructure, Oxygen Consumption, RNA, Fungal analysis, RNA, Ribosomal analysis, Ribosomes analysis, DNA, Fungal genetics, DNA, Mitochondrial genetics, Genetic Variation, Mitochondria physiology, Neurospora genetics
- Abstract
From a sample of 122 natural isolates of Neurospora intermedia collected recently from around the world, five variants had erratic stop-start growth patterns reminiscent of the phenotype of "stopper" laboratory extranuclear mutants of Neurospora crassa. Like laboratory isolated mutants, the natural "stopper" variants were sterile as protoperithecial parents and transmitted the variant growth phenotypes very inefficiently, if at all, as male parents. Heterokaryon tests could not be made because of strain incompatibilities. Four of the variants have mitochondrial cytochrome aa3 and b deficiencies. These four variants are all defective in mitochondrial ribosome assembly and have abnormal ratios of large to small subunits. Restriction enzyme analyses revealed some similarity of N. intermedia to N. crassa mtDNA. One normal and four variant strains had additional DNA in comparison to a standard normal strain. Cumulatively, the results indicate that the genetic alterations which cause stopper phenotypes of these natural isolates of N. intermedia are of mitochondrial rather than nuclear origin.
- Published
- 1982
- Full Text
- View/download PDF
42. Identification of a complex chromosome rearrangement in Neurospora crassa.
- Author
-
Griffiths AJ, Delange AM, and Jung JH
- Subjects
- Chromosome Inversion, Crosses, Genetic, Gene Frequency, Genetic Linkage, Heterozygote, Recombination, Genetic, Chromosome Aberrations, Neurospora ultrastructure, Neurospora crassa ultrastructure
- Published
- 1974
- Full Text
- View/download PDF
43. Mutations of the a Mating-Type Gene in NEUROSPORA CRASSA.
- Author
-
Griffiths AJ and Delange AM
- Abstract
In Neurospora, the mating-type locus controls both mating ( A + a is fertile) and heterokaryosis (A + a is incompatible). The two alleles appear stable: no novel fertility reactions have ever been reported, and attempts to separate fertility and heterokaryon incompatibility functions by recombination have been unsuccessful. In the present approach the locus was studied through a mutational analysis of heterokaryon incompatibility function. A selection system was used that detects vigorous (A + a) heterokaryotic colonies against a background of inhibited growth. Twenty-five mutants of an a strain were produced following mutagenic treatment with UV and NG: 15 were viable as homokaryons and 10 were not. All but one were infertile, but most showed an abortive mating reaction involving the production of barren, well-developed perithecia with A and (surprisingly) a testers. None of the mutants complement each other to restore fertility. Seven mutants have been mapped to the mating-type locus region of chromosome 1. Restoration of fertility was used to detect revertants, and these were found in five out of the eight mutants tested. (A dose response was observed). In four cases incompatibility was fully restored and in one case it was not.-The results suggest two positive actions of the locus when in heterozygous (A/a) combination (the stimulation of some stage of ascus production and the inhibition of vegetative heterokaryosis), and one positive action in homozygous combination (the production of a perithecial inhibitor).
- Published
- 1978
- Full Text
- View/download PDF
44. Double stranded RNA in natural isolates of Neurospora.
- Author
-
Myers CJ, Griffiths AJ, Kraus SR, and Martin RR
- Subjects
- DNA, Fungal isolation & purification, Nucleic Acid Hybridization, RNA, Viral isolation & purification, Sequence Homology, Nucleic Acid, Species Specificity, Neurospora genetics, RNA, Double-Stranded isolation & purification, RNA, Fungal isolation & purification
- Abstract
Thirty-six wild type isolates of Neurospora were surveyed for the presence of dsRNA. The survey identified seven strains which contain dsRNA molecules. These seven strains are all from different geographic locations. The sizes of the dsRNAs range from 500 bp to 18 kb and a total of seven distinct dsRNA species was identified. Cross homologies of some of the dsRNAs were apparent. There was homology between the 9.0 kb dsRNA and genomic DNA prepared from all strains in the survey, indicating a possible cellular rather than viral origin for this dsRNA species. None of the other dsRNAs hybridized with genomic DNA suggesting a viral origin for these dsRNAs.
- Published
- 1988
- Full Text
- View/download PDF
45. A taxonomic and ecological study of candidosis.
- Author
-
Srivastava AC, Turner J, Hughes DE, and Griffiths AJ
- Abstract
A total of 450 yeast isolates were obtained from up to 34 sites on 59 human subjects. The yeasts were characterized using morphological features and assimilation tests. Ten species were identified but, of these,Candida albicans andCandida parapsilosis were the most common and accounted for 84% of the isolates. An examination of the biotypes of the various species indicated a much greater diversity in the yeast microflora than that detected by species identifications alone. Fifty-five biotypes were differentiated and it is suggested that these could be regarded as distinct taxonomic or ecological entities.
- Published
- 1985
- Full Text
- View/download PDF
46. Meiosis in Neurospora crassa. I. The isolation of recessive mutants defective in the production of viable ascospores.
- Author
-
DeLange AM and Griffiths AJ
- Subjects
- Crosses, Genetic, Cytological Techniques, Genes, Recessive, Genetic Techniques, Mutation, Phenotype, Meiosis, Neurospora genetics, Neurospora crassa genetics
- Abstract
A scheme has been devised for efficient isolation of recessive meiotic mutants of Neurospora crassa. These mutants were detected by their reduced fertility or by the abortion of ascospores. Their isolation involved the selection and screening of the strains arising from ascospores disomic (n + 1) for linkage group I (LG I), which bears the mating-type locus. These strains are self-fertile heterokaryons that contain two types of haploid nuclei of opposite mating types (A + a). Selfings of these strains are homozygous for genes on all linkage groups except LGI and therefore allow the expression of recessive mutants with an altered sexual cycle. Using this selection procedure, three classes of mutants were detected. In one class, mutants had an early block in perithecial development (class I), and in another mutants had altered perithecia, but apparently unaltered fertility (class III). No recessive mutants were observed and all mutants tested (eight of class I and two of class III) were expressed only when used as the maternal parent. A third mutant class displayed normal production of perithecia, but defective formation of asci (class IIA), or black ascospores (class IIB). Four of 13 class IIA mutants were analyzed, and two of them [asc(DL131) and asc (DL400)] were definitely recessive analysis of 10 of 13 class IIB mutants disclosed six recessive, mutually complementing mutants: ase(DL95), asc(DL243), asc(DL711), asc(DL879), asc(DL917m) and asc(DL961). Mutants asc(DL95), asc(DL243) and the previously studied mei-1 mutant (Smith 1975) complemented one another in crosses, but did not recombine. These may be alleles of the same gene, or they may comprise a gene cluster.
- Published
- 1980
- Full Text
- View/download PDF
47. A comparative study of the reading lessons of deaf and hearing primary school children.
- Author
-
Howarth SP, Wood DJ, Griffiths AJ, and Howarth CI
- Subjects
- Child, Humans, Deafness psychology, Education, Reading
- Published
- 1981
- Full Text
- View/download PDF
48. The cytochromes of Dictyostelium discoideum.
- Author
-
Woffendin C, Edwards SW, and Griffiths AJ
- Subjects
- Animals, Carbon Monoxide, Cytochrome a Group, Cytochrome b Group analysis, Cytochrome c Group analysis, Electron Transport Complex IV analysis, Eukaryota analysis, Microsomes analysis, Mitochondria analysis, Spectrophotometry, Cytochromes analysis, Dictyostelium analysis
- Abstract
1. Low temperature (77 K), reduced oxidized difference spectra of "purified" mitochondria of Dictyostelium discoideum revealed the presence of b, c and a-type cytochromes. 2. The same components were also identifiable in intact organisms, the only possible discrepancies from the contribution by "microsomal" b-type cytochromes which showed major maxima at 533, 553, and 560 nm. 3. Room temperature carbon monoxide difference spectra of mitochondrial enriched fractions revealed at least three components reacting with CO. These were: cytochrome a3; another a-type cytochrome, a614; a b-type cytochrome. The latter component rapidly reacted with CO but ligand dissociation was observed over a period of about 20 min. 4. Microsomal membranes contained at least two CO-reacting components tentatively attributed to cytochromes P-450 and P-420 and it is suggested that cytochrome P-450 may be converted to cytochrome P-420 in the presence of CO and sodium dithionite. 5. The results are compared with those obtained for other protozoa.
- Published
- 1983
- Full Text
- View/download PDF
49. Microorganisms and heavy metal toxicity.
- Author
-
Gadd GM and Griffiths AJ
- Abstract
The environmental and microbiological factors that can influence heavy metal toxicity are discussed with a view to understanding the mechanisms of microbial metal tolerance. It is apparent that metal toxicity can be heavily influenced by environmental conditions. Binding of metals to organic materials, precipitation, complexation, and ionic interactions are all important phenomena that must be considered carefully in laboratory and field studies. It is also obvious that microbes possess a range of tolerance mechanisms, most featuring some kind of detoxification. Many of these detoxification mechanisms occur widely in the microbial world and are not only specific to microbes growing in metal-contaminated environments.
- Published
- 1977
- Full Text
- View/download PDF
50. Selective cleavage of skeletal myosin subfragment-1 to form a 26 kDa peptide which shows ATP-sensitive actin binding.
- Author
-
Griffiths AJ and Trayer IP
- Subjects
- Binding Sites, Molecular Weight, Myosin Subfragments, Myosins isolation & purification, Peptide Fragments isolation & purification, Protein Binding, Structure-Activity Relationship, Actins metabolism, Adenosine Triphosphate metabolism, Myosins metabolism, Peptide Fragments metabolism
- Abstract
A 26 kDa peptide has been cleaved from the C-terminus of the S1 heavy chain with formic acid. Cleavage occurs in the '50 kDa' domain probably at the Asp-600-Pro-601 bond. This fragment has been renatured in the presence of the A2 light chain and the 26 kDa(A2) complex shown to interact with actin in an ATP-sensitive manner.
- Published
- 1989
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.