84 results on '"Gregory J. McDermid"'
Search Results
2. Satellite Time Series and Google Earth Engine Democratize the Process of Forest-Recovery Monitoring over Large Areas
- Author
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Jennifer N. Hird, Jahan Kariyeva, and Gregory J. McDermid
- Subjects
spectral recovery ,forest harvest ,Landsat time series ,LandTrendr ,Google Earth Engine ,data democratization ,Science - Abstract
Contemporary forest-health initiatives require technologies and workflows that can monitor forest degradation and recovery simply and efficiently over large areas. Spectral recovery analysis—the examination of spectral trajectories in satellite time series—can help democratize this process, particularly when performed with cloud computing and open-access satellite archives. We used the Landsat archive and Google Earth Engine (GEE) to track spectral recovery across more than 57,000 forest harvest areas in the Canadian province of Alberta. We analyzed changes in the normalized burn ratio (NBR) to document a variety of recovery metrics, including year of harvest, percent recovery after five years, number of years required to achieve 80% of pre-disturbance NBR, and % recovery the end of our monitoring window (2018). We found harvest areas in Alberta to recover an average of 59.9% of their pre-harvest NBR after five years. The mean number of years required to achieve 80% recovery in the province was 8.7 years. We observed significant variability in pre- and post-harvest spectral recovery both regionally and locally, demonstrating the importance of climate, elevation, and complex local factors on rates of spectral recovery. These findings are comparable to those reported in other studies and demonstrate the potential for our workflow to support broad-scale management and research objectives in a manner that is complimentary to existing information sources. Measures of spectral recovery for all 57,979 harvest areas in our analysis are freely available and browseable via a custom GEE visualization tool, further demonstrating the accessibility of this information to stakeholders and interested members of the public.
- Published
- 2021
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- View/download PDF
3. The Forest Line Mapper: A Semi-Automated Tool for Mapping Linear Disturbances in Forests
- Author
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Gustavo Lopes Queiroz, Gregory J. McDermid, Mir Mustafizur Rahman, and Julia Linke
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LiDAR ,mapping ,forestry ,vegetation ,corridor ,disturbance ,Science - Abstract
Forest land-use planning and restoration requires effective tools for mapping and attributing linear disturbances such as roads, trails, and asset corridors over large areas. Most existing linear-feature databases are generated by heads-up digitizing. While suitable for cartographic purposes, these datasets often lack the fine spatial details and multiple attributes required for more demanding analytical applications. To address this need, we developed the Forest Line Mapper (FLM), a semi-automated software tool for mapping and attributing linear features using LiDAR-derived canopy height models. Accuracy assessments conducted in the boreal forest of Alberta, Canada showed that the FLM reliably predicts both the center line (polyline) and footprint (extent polygons) of a variety of linear-feature types including roads, pipelines, seismic lines, and power lines. Our analysis showed that FLM outputs were consistently more accurate than publicly available datasets produced by human photo-interpreters, and that the tool can be reliably deployed across large application areas. In addition to accurately delineating linear features, the FLM generates a variety of spatial attributes associated with line geometry and vegetation characteristics from input canopy height data. Our statistical evaluation indicates that spatial attributes generated by the FLM may be useful for studying and classifying linear features based on disturbance type and ground conditions. The FLM is open-source and freely available and is aimed to assist researchers and land managers working in forested environments everywhere.
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- 2020
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4. Quantifying Aboveground Biomass of Shrubs Using Spectral and Structural Metrics Derived from UAS Imagery
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Lucy G. Poley, David N. Laskin, and Gregory J. McDermid
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aboveground biomass ,shrubs ,vegetation indices ,RGB ,multispectral ,canopy height model ,Science - Abstract
Shrub-dominated ecosystems support biodiversity and play an important storage role in the global carbon cycle. However, it is challenging to characterize biophysical properties of low-stature vegetation like shrubs from conventional ground-based or remotely sensed data. We used spectral and structural variables derived from high-resolution unmanned aerial system (UAS) imagery to estimate the aboveground biomass of shrubs in the Betula and Salix genera in a montane meadow in Banff National Park, Canada using an area-based approach. In single-variable linear regression models, visible light (RGB) indices outperformed multispectral or structural data. A linear model based on the red ratio vegetation index (VI) accumulated over shrub area could model biomass (calibration R2 = 0.888; validation R2 = 0.774) nearly as well as the top multivariate linear regression models (calibration R2 = 0.896; validation R2 > 0.750), which combined an accumulated RGB VI with a multispectral metric. The excellent performance of accumulated RGB VIs represents a novel approach to fine-scale vegetation biomass estimation, fusing spectral and spatial information into a single parsimonious metric that rivals the performance of more complex multivariate models. Methods developed in this study will be relevant to researchers interested in estimating fine-scale shrub aboveground biomass within a range of ecosystems.
- Published
- 2020
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5. A Systematic Review of the Factors Influencing the Estimation of Vegetation Aboveground Biomass Using Unmanned Aerial Systems
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Lucy G. Poley and Gregory J. McDermid
- Subjects
unmanned aerial system ,uas ,aboveground biomass ,agb ,vegetation ,rgb imagery ,multispectral ,uav ,Science - Abstract
Interest in the use of unmanned aerial systems (UAS) to estimate the aboveground biomass (AGB) of vegetation in agricultural and non-agricultural settings is growing rapidly but there is no standardized methodology for planning, collecting and analyzing UAS data for this purpose. We synthesized 46 studies from the peer-reviewed literature to provide the first-ever review on the subject. Our analysis showed that spectral and structural data from UAS imagery can accurately estimate vegetation biomass in a variety of settings, especially when both data types are combined. Vegetation-height metrics are useful for trees, while metrics of variation in structure or volume are better for non-woody vegetation. Multispectral indices using NIR and red-edge wavelengths normally have strong relationships with AGB but RGB-based indices often outperform them in models. Including measures of image texture can improve model accuracy for vegetation with heterogeneous canopies. Vegetation growth structure and phenological stage strongly influence model accuracy and the selection of useful metrics and should be considered carefully. Additional factors related to the study environment, data collection and analytical approach also impact biomass estimation and need to be considered throughout the workflow. Our review shows that UASs provide a capable tool for fine-scale, spatially explicit estimations of vegetation AGB and are an ideal complement to existing ground- and satellite-based approaches. We recommend future studies aimed at emerging UAS technologies and at evaluating the effect of vegetation type and growth stages on AGB estimation.
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- 2020
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6. Comparison of LiDAR and Digital Aerial Photogrammetry for Characterizing Canopy Openings in the Boreal Forest of Northern Alberta
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Annette Dietmaier, Gregory J. McDermid, Mir Mustafizur Rahman, Julia Linke, and Ralf Ludwig
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LiDAR ,photogrammetry ,forest structure ,forest openings ,canopy openings ,canopy gaps ,Science - Abstract
Forest canopy openings are a key element of forest structure, influencing a host of ecological dynamics. Light detection and ranging (LiDAR) is the de-facto standard for measuring three-dimensional forest structure, but digital aerial photogrammetry (DAP) has emerged as a viable and economical alternative. We compared the performance of LiDAR and DAP data for characterizing canopy openings and no-openings across a 1-km2 expanse of boreal forest in northern Alberta, Canada. Structural openings in canopy cover were delineated using three canopy height model (CHM) alternatives, from (i) LiDAR, (ii) DAP, and (iii) a LiDAR/DAP hybrid. From a point-based detectability perspective, the LiDAR CHM produced the best results (87% overall accuracy), followed by the hybrid and DAP models (47% and 46%, respectively). The hybrid and DAP CHMs experienced large errors of omission (9−53%), particularly with small openings up to 20m2, which are an important element of boreal forest structure. By missing these, DAP and hybrid datasets substantially under-reported the total area of openings across our site (152,470 m2 and 159,848 m2, respectively) compared to LiDAR (245,920 m2). Our results illustrate DAP’s sensitivity to occlusions, mismatched tie points, and other optical challenges inherent to using structure-from-motion workflows in complex forest scenes. These under-documented constraints currently limit the technology’s capacity to fully characterize canopy structure. For now, we recommend that operational use of DAP in forests be limited to mapping large canopy openings, and area-based attributes that are well-documented in the literature.
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- 2019
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7. Integration of LIDAR, optical remotely sensed, and ancillary data for forest monitoring and Grizzly bear habitat characterization / Integração de LIDAR, sensores remotos óticos e dados auxiliares para o monitoramento fl orestal e caracterização do habitat dos ursos Grizzly
- Author
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Michael A. Wulder, Joanne C. White, Nicholas C. Coops, Gregory J. McDermid, Thomas Hilker, and Steven E. Franklin
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remote sensing ,GIS ,forestry inventory ,mapping ,monitoring ,habitat ,Grizzly bear ,LIDAR ,spatial resolution ,Landsat ,MODIS. ,Environmental sciences ,GE1-350 - Abstract
Forest management and reporting information needs are becomingincreasingly complex in Canada. Inclusion of timber and non-timber considerations for both management and reporting has resulted inopportunities for integration of data from differing sources to provide the desired information. Canada’s forested land-base is over 400million hectares in size and fulfi lls important ecological and economic functions. In this communication we describe how remotely senseddata and other available spatial data layers capture different forestcharacteristics and conditions, and how these varying data sources may be combined to provide otherwise unavailable information. For instance, light detection and ranging (LIDAR) confers information regardingvertical forest structure; high spatial resolution imagery captures (indetail) the horizontal distribution and arrangement of vegetation andvegetation conditions; and, moderate spatial resolution imagery providesconsistent wide-area depictions of forest conditions. Furthermore, coarsespatial resolution imagery, with a high temporal density, can be blended with data of a higher spatial resolution to generate moderate spatialresolution data with a high temporal density. These remotely sensed datasources, when combined with existing spatial data layers such as forest inventory and digital terrain models, provide useful information thatmay be used to address, through modelling, questions regarding forest condition, structure, and change. In this communication, we discuss the importance of data integration and ultimately, information generation, inthe context of Grizzly bear habitat characterization. Grizzly bear habitat in western Canada is currently undergoing pressure from a combination of anthropogenic activities and a widespread outbreak of mountain pine beetle, resulting in a variety of information needs, including: detailed depictions of horizontal and vertical vegetation structure over large areasto support bark beetle susceptibility mapping and habitat modelling;moderate spatial resolution data to capture changes in infestation conditions over time to support change detection and wall-to-wallmapping; and, coarse spatial resolution data to provide increased temporaldetail enabling capture of within-year alterations to Grizzly habitat.
- Published
- 2008
8. Measuring Vegetation Height in Linear Disturbances in the Boreal Forest with UAV Photogrammetry
- Author
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Shijuan Chen, Gregory J. McDermid, Guillermo Castilla, and Julia Linke
- Subjects
UAV ,vegetation ,point clouds ,3D ,accuracy assessment ,remote sensing ,Science - Abstract
Monitoring vegetation recovery typically requires ground measurements of vegetation height, which is labor-intensive and time-consuming. Recently, unmanned aerial vehicles (UAVs) have shown great promise for characterizing vegetation in a cost-efficient way, but the literature on specific methods and cost savings is scant. In this study, we surveyed vegetation height on seismic lines in Alberta’s Boreal Forest using a point-intercept sampling strategy, and compared them to height estimates derived from UAV-based photogrammetric point clouds. In order to derive UAV-based vegetation height, we tested three different approaches to estimate terrain elevation: (1) UAV_RTK, where photogrammetric point clouds were normalized using terrain measurements obtained from a real-time kinematic global navigation satellite system (RTK GNSS) surveys; (2) UAV_LiDAR, where photogrammetric data were normalized using pre-existing LiDAR (Light Detection and Ranging) data; and (3) UAV_UAV, where UAV photogrammetry data were used alone. Comparisons were done at two scales: point level (n = 1743) and site level (n = 30). The point-level root-mean-square errors (RMSEs) of UAV_RTK, UAV_LiDAR, and UAV_UAV were 28 cm, 31 cm, and 30 cm, respectively. The site-level RMSEs were 11 cm, 15 cm, and 8 cm, respectively. At the aggregated site level, we found that UAV photogrammetry could replace traditional field-based vegetation surveys of mean vegetation height across the range of conditions assessed in this study, with an RMSE less than 10 cm. Cost analysis indicates that using UAV-based point clouds is more cost-effective than traditional field vegetation surveys.
- Published
- 2017
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9. Google Earth Engine, Open-Access Satellite Data, and Machine Learning in Support of Large-Area Probabilistic Wetland Mapping
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Jennifer N. Hird, Evan R. DeLancey, Gregory J. McDermid, and Jahan Kariyeva
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cloud computing ,machine learning ,wetland classification ,Sentinel-1 ,Sentinel-2 ,digital terrain model ,boosted regression trees ,topographic wetness index ,topographic position index ,satellite data streams ,Science - Abstract
Modern advances in cloud computing and machine-leaning algorithms are shifting the manner in which Earth-observation (EO) data are used for environmental monitoring, particularly as we settle into the era of free, open-access satellite data streams. Wetland delineation represents a particularly worthy application of this emerging research trend, since wetlands are an ecologically important yet chronically under-represented component of contemporary mapping and monitoring programs, particularly at the regional and national levels. Exploiting Google Earth Engine and R Statistical software, we developed a workflow for predicting the probability of wetland occurrence using a boosted regression tree machine-learning framework applied to digital topographic and EO data. Working in a 13,700 km2 study area in northern Alberta, our best models produced excellent results, with AUC (area under the receiver-operator characteristic curve) values of 0.898 and explained-deviance values of 0.708. Our results demonstrate the central role of high-quality topographic variables for modeling wetland distribution at regional scales. Including optical and/or radar variables into the workflow substantially improved model performance, though optical data performed slightly better. Converting our wetland probability-of-occurrence model into a binary Wet-Dry classification yielded an overall accuracy of 85%, which is virtually identical to that derived from the Alberta Merged Wetland Inventory (AMWI): the contemporary inventory used by the Government of Alberta. However, our workflow contains several key advantages over that used to produce the AMWI, and provides a scalable foundation for province-wide monitoring initiatives.
- Published
- 2017
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10. A New Method to Map Groundwater Table in Peatlands Using Unmanned Aerial Vehicles
- Author
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Mir Mustafizur Rahman, Gregory J. McDermid, Maria Strack, and Julie Lovitt
- Subjects
UAV ,photogrammetry ,groundwater table ,peatland ,remote sensing ,spatial interpolation ,Science - Abstract
Groundwater level (GWL) and depth to water (DTW) are related metrics aimed at characterizing groundwater-table positions in peatlands, and two of the most common variables collected by researchers working in these ecosystems. While well-established field techniques exist for measuring GWL and DTW, they are generally difficult to scale. In this study, we present a novel workflow for mapping groundwater using orthophotography and photogrammetric point clouds acquired from unmanned aerial vehicles. Our approach takes advantage of the fact that pockets of surface water are normally abundant in peatlands, which we assume to be reflective of GWL in these porous, gently sloping environments. By first classifying surface water and then extracting a sample of water elevations, we can generate continuous models of GWL through interpolation. Estimates of DTW can then be obtained through additional efforts to characterize terrain. We demonstrate our methodology across a complex, 61-ha treed bog in northern Alberta, Canada. An independent accuracy assessment using 31 temporally coincident water-well measurements revealed accuracies (root mean square error) in the 20-cm range, though errors were concentrated in small upland pockets in the study area, and areas of dense tree covers. Model estimates in the open peatland areas were considerably better.
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- 2017
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11. Assessing the Value of UAV Photogrammetry for Characterizing Terrain in Complex Peatlands
- Author
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Julie Lovitt, Mir Mustafizur Rahman, and Gregory J. McDermid
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UAV ,photogrammetry ,LiDAR ,terrain ,peatlands ,microtopography ,point clouds ,Science - Abstract
Microtopographic variability in peatlands has a strong influence on greenhouse gas fluxes, but we lack the ability to characterize terrain in these environments efficiently over large areas. To address this, we assessed the capacity of photogrammetric data acquired from an unmanned aerial vehicle (UAV or drone) to reproduce ground elevations measured in the field. In particular, we set out to evaluate the role of (i) vegetation/surface complexity and (ii) supplementary LiDAR data on results. We compared remote-sensing observations to reference measurements acquired with survey grade GPS equipment at 678 sample points, distributed across a 61-hectare treed bog in northwestern Alberta, Canada. UAV photogrammetric data were found to capture elevation with accuracies, by root mean squares error, ranging from 14–42 cm, depending on the state of vegetation/surface complexity. We judge the technology to perform well under all but the most-complex conditions, where ground visibility is hindered by thick vegetation. Supplementary LiDAR data did not improve results significantly, nor did it perform well as a stand-alone technology at the low densities typically available to researchers.
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- 2017
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12. Use of Unmanned Aerial Vehicles for Monitoring Recovery of Forest Vegetation on Petroleum Well Sites
- Author
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Jennifer N. Hird, Alessandro Montaghi, Gregory J. McDermid, Jahan Kariyeva, Brian J. Moorman, Scott E. Nielsen, and Anne C. S. McIntosh
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unmanned aerial vehicles ,photogrammetry ,point clouds ,vegetation structure ,vegetation height ,vegetation cover ,ecological recovery ,reclamation ,Science - Abstract
Photogrammetric point clouds (PPCs) provide a source of three-dimensional (3-D) remote sensing data that is well-suited to use over small areas that are within the scope of observation by unmanned aerial vehicles (UAVs). We compared PPC-based structural metrics to traditional ground surveys conducted by field personnel in order to assess the capacity of PPC data to contribute to vegetation-reclamation surveys. We found good statistical agreement between key structural vegetation parameters, such as mean and maximum vegetation height, with PPC metrics successfully predicting most height and tree-diameter metrics using multivariate linear regression. However, PPC metrics were not as useful for estimating ground-measured vegetation cover. We believe that part of the issue lies in the mismatch between PPC- and ground-based measurement approaches, including subjective judgement on behalf of ground crews: a topic that requires more investigation. Our work highlights the emerging value of UAV-based PPCs to complement, and in some cases supplement, traditional ground-based sources of measured vegetation structure.
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- 2017
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13. Estimating Understory Temperatures Using MODIS LST in Mixed Cordilleran Forests
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David N. Laskin, Alessandro Montaghi, Scott E. Nielsen, and Gregory J. McDermid
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MODIS ,land surface temperature ,understory air temperature ,phenology ,climate change ,LiDAR ,Science - Abstract
Satellite remote sensing provides a rapid and broad-scale means for monitoring vegetation phenology and its relationship with fluctuations in air temperature. Investigating the response of plant communities to climate change is needed to gain insight into the potentially detrimental effects on ecosystem processes. While many studies have used satellite-derived land surface temperature (LST) as a proxy for air temperature, few studies have attempted to create and validate models of forest understory temperature (Tust), as it is obscured from these space-borne observations. This study worked to predict instantaneous values of Tust using daily Moderate Resolution Imaging Spectroradiometer (MODIS) LST data over a 99,000 km2 study area located in the Rocky Mountains of western Alberta, Canada. Specifically, we aimed to identify the forest characteristics that improve estimates of Tust over using LST alone. Our top model predicted Tust to within a mean absolute error (MAE) of 1.4 °C with an overall model fit of R2 = 0.89 over two growing seasons. Canopy closure and the LiDAR-derived standard deviation of canopy height metric were found to significantly improve estimations of Tust over MODIS LST alone. These findings demonstrate that canopy structure and forest stand-type function to differentiate understory air temperatures from ambient canopy temperature as seen by the sensor overhead.
- Published
- 2016
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14. A Multi-Resolution Approach to Point Cloud Registration without Control Points.
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Eleanor A. Bash, Lakin Wecker, Mir Mustafizur Rahman, Christine F. Dow, Gregory J. McDermid, Faramarz F. Samavati, Ken Whitehead, Brian J. Moorman, Dorota Medrzycka, and Luke Copland
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- 2023
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15. A Simple Transformation for Visualizing Non-seasonal Landscape Change From Dense Time Series of Satellite Data.
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Jennifer N. Hird, Guillermo Castilla, Gregory J. McDermid, and Inácio T. Bueno
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- 2016
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16. Evaluating the level of agreement between human and time-lapse camera observations of understory plant phenology at multiple scales.
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David N. Laskin and Gregory J. McDermid
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- 2016
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17. Discriminating Native and Nonnative Grasses in the Dry Mixedgrass Prairie With MODIS NDVI Time Series.
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William S. McInnes, Brent Smith, and Gregory J. McDermid
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- 2015
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18. Spatial Agreement among Vegetation Disturbance Maps in Tropical Domains Using Landsat Time Series.
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Inácio T. Bueno, Gregory J. McDermid, Eduarda M. O. Silveira, Jennifer N. Hird, Breno I. Domingos, and Fausto W. Acerbi-Junior
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- 2020
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19. POLS: A versatile tool for sampling polygon GIS layers.
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Guillermo Castilla, Ana Hernando, Chunhua Zhang 0003, Francisco Mauro, and Gregory J. McDermid
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- 2014
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20. Automated Detection of Conifer Seedlings in Drone Imagery Using Convolutional Neural Networks.
- Author
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Michael Fromm 0001, Matthias Schubert, Guillermo Castilla, Julia Linke, and Gregory J. McDermid
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- 2019
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21. A Conceptual Model for Multi-Temporal Landscape Monitoring in an Object-Based Environment.
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Julia Linke and Gregory J. McDermid
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- 2011
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22. How do human activities shape wolves' behavior in the central Rocky Mountains region, Alberta, Canada?
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Sk. Morshed Anwar, Marco Musiani, Gregory J. McDermid, and Danielle J. Marceau
- Published
- 2009
23. Satellite Time Series and Google Earth Engine Democratize the Process of Forest-Recovery Monitoring over Large Areas
- Author
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Gregory J. McDermid, Jahan Kariyeva, and Jennifer N. Hird
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010504 meteorology & atmospheric sciences ,Process (engineering) ,Normalized burn ratio ,Science ,0211 other engineering and technologies ,spectral recovery ,Cloud computing ,02 engineering and technology ,01 natural sciences ,LandTrendr ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Series (stratigraphy) ,business.industry ,Environmental resource management ,Elevation ,forest harvest ,Landsat time series ,Google Earth Engine ,data democratization ,open-access data ,science-to-knowledge translation ,15. Life on land ,Workflow ,General Earth and Planetary Sciences ,Environmental science ,Satellite ,Forest recovery ,business - Abstract
Contemporary forest-health initiatives require technologies and workflows that can monitor forest degradation and recovery simply and efficiently over large areas. Spectral recovery analysis—the examination of spectral trajectories in satellite time series—can help democratize this process, particularly when performed with cloud computing and open-access satellite archives. We used the Landsat archive and Google Earth Engine (GEE) to track spectral recovery across more than 57,000 forest harvest areas in the Canadian province of Alberta. We analyzed changes in the normalized burn ratio (NBR) to document a variety of recovery metrics, including year of harvest, percent recovery after five years, number of years required to achieve 80% of pre-disturbance NBR, and % recovery the end of our monitoring window (2018). We found harvest areas in Alberta to recover an average of 59.9% of their pre-harvest NBR after five years. The mean number of years required to achieve 80% recovery in the province was 8.7 years. We observed significant variability in pre- and post-harvest spectral recovery both regionally and locally, demonstrating the importance of climate, elevation, and complex local factors on rates of spectral recovery. These findings are comparable to those reported in other studies and demonstrate the potential for our workflow to support broad-scale management and research objectives in a manner that is complimentary to existing information sources. Measures of spectral recovery for all 57,979 harvest areas in our analysis are freely available and browseable via a custom GEE visualization tool, further demonstrating the accessibility of this information to stakeholders and interested members of the public.
- Published
- 2021
24. A workflow to minimize shadows in UAV-based orthomosaics
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Julie Lovitt, Taylor Mckeeman, Gregory J. McDermid, and Mir Mustafizur Rahman
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Control and Optimization ,010504 meteorology & atmospheric sciences ,Computer science ,media_common.quotation_subject ,0211 other engineering and technologies ,Orthophoto ,Aerospace Engineering ,Terrain ,02 engineering and technology ,01 natural sciences ,Computer Science Applications ,Workflow ,Photogrammetry ,Control and Systems Engineering ,Remote sensing (archaeology) ,Automotive Engineering ,Quality (business) ,Electrical and Electronic Engineering ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,media_common - Abstract
Shadows from buildings, terrain, and other elevated features represent lost and (or) impaired data values that hinder the quality of optical images acquired under all but the most diffuse illumination conditions. This is particularly problematic in high-spatial-resolution imagery acquired from unmanned aerial vehicles (UAVs), which generally operate very close to the ground. However, the flexibility and low cost of re-deployment of the platform also presents opportunities, which we capitalize on in a new workflow designed to eliminate shadows from UAV-based orthomosaics. Our straightforward, three-step procedure relies on images acquired from two different UAV flights, where illumination conditions produce diverging shadow orientations: one before solar noon and another after. From this multi-temporal image stack, we first identify and then eliminate shadows from individual orthophoto components, then construct the final orthomosaic using a feature-matching strategy with the commercial software package Photoscan. The utility of our strategy is demonstrated over a treed-wetland study site in northwestern Alberta, Canada; a complex scene containing a wide variety of shadows, which our workflow effectively eliminated. While shadow-reduced orthomosaics are generally less useful for feature-identification tasks that rely on the shadow element of image interpretation, they create a superior foundation for most other image-processing routines, including classification and change-detection.
- Published
- 2019
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25. Estimating Individual Conifer Seedling Height Using Drone-Based Image Point Clouds
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Gregory J. McDermid, Michelle Filiatrault, Guillermo Castilla, and Michael Gartrell
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restoration ,010504 meteorology & atmospheric sciences ,Mean squared error ,0211 other engineering and technologies ,02 engineering and technology ,photogrammetry ,01 natural sciences ,Statistics ,forest inventory ,Digital elevation model ,drone-based image point clouds (DIPC) ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Mathematics ,Forest inventory ,biology ,Phenology ,Ground sample distance ,Elevation ,Forestry ,Unmanned Aerial Vehichles (UAV) ,lcsh:QK900-989 ,forest monitoring ,biology.organism_classification ,Seedling ,lcsh:Plant ecology - Abstract
Research Highlights: This is the most comprehensive analysis to date of the accuracy of height estimates for individual conifer seedlings derived from drone-based image point clouds (DIPCs). We provide insights into the effects on accuracy of ground sampling distance (GSD), phenology, ground determination method, seedling size, and more. Background and Objectives: Regeneration success in disturbed forests involves costly ground surveys of tree seedlings exceeding a minimum height. Here we assess the accuracy with which conifer seedling height can be estimated using drones, and how height errors translate into counting errors in stocking surveys. Materials and Methods: We compared height estimates derived from DIPCs of different GSD (0.35 cm, 0.75 cm, and 3 cm), phenological state (leaf-on and leaf-off), and ground determination method (based on either the DIPC itself or an ancillary digital terrain model). Each set of height estimates came from data acquired in up to three linear disturbances in the boreal forest of Alberta, Canada, and included 22 to 189 surveyed seedlings, which were split into two height strata to assess two survey scenarios. Results: The best result (root mean square error (RMSE) = 24 cm, bias = &minus, 11 cm, R2 = 0.63, n = 48) was achieved for seedlings >, 30 cm with 0.35 cm GSD in leaf-off conditions and ground elevation from the DIPC. The second-best result had the same GSD and ground method but was leaf-on and not significantly different from the first. Results for seedlings &le, 30 cm were unreliable (nil R2). Height estimates derived from manual softcopy interpretation were similar to the corresponding DIPC results. Height estimation errors hardly affected seedling counting errors (best balance was 8% omission and 6% commission). Accuracy and correlation were stronger at finer GSDs and improved with seedling size. Conclusions: Millimetric (GSD <, 1 cm) DIPC can be used for estimating the height of individual conifer seedlings taller than 30 cm.
- Published
- 2020
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26. UAV Remote Sensing Can Reveal the Effects of Low-Impact Seismic Lines on Surface Morphology, Hydrology, and Methane (CH4) Release in a Boreal Treed Bog
- Author
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Gregory J. McDermid, Saraswati Saraswati, Mustafizur M. Rahman, Julie Lovitt, Maria Strack, and Bin Xu
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Atmospheric Science ,Peat ,Morphology (linguistics) ,010504 meteorology & atmospheric sciences ,0211 other engineering and technologies ,Soil Science ,02 engineering and technology ,Aquatic Science ,01 natural sciences ,Methane ,chemistry.chemical_compound ,Hydrology (agriculture) ,Geomorphology ,Bog ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Water Science and Technology ,geography ,geography.geographical_feature_category ,Ecology ,Paleontology ,Forestry ,Boreal ,chemistry ,Remote sensing (archaeology) ,Seismic line ,Environmental science - Published
- 2018
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27. Energetic behavioural-strategy prioritization of Clark’s nutcrackers in whitebark pine communities: An agent-based modeling approach
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Danielle J. Marceau, Christina A.D. Semeniuk, Adam J. McLane, Diana F. Tomback, Gregory J. McDermid, and Teresa J. Lorenz
- Subjects
0106 biological sciences ,Driving factors ,Nutcrackers ,biology ,Computer science ,business.industry ,Ecology ,010604 marine biology & hydrobiology ,Ecological Modeling ,Ecology (disciplines) ,media_common.quotation_subject ,Environmental resource management ,Foraging ,Life Sciences ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Environmental data ,Spatial ecology ,Conceptual model ,Heuristics ,business ,Biology ,media_common - Abstract
While much is known about the relationship between Clark’s nutcracker and whitebark pine, information on nutcracker energetic behavioural strategies − the driving factors behind nutcracker emigration − and the impact of nutcracker behaviour on whitebark pine communities remain uncertain. To investigate nutcracker energetic behaviour, we developed a spatially explicit agent-based model (ABM) to simulate the underlying behavioural mechanisms nutcrackers are most likely to employ during foraging in the South Cascades near Mt. Rainier, Washington. The ABM is comprised of cognitive nutcracker agents possessing memory and decision-making heuristics that act to optimize energy acquisition and loss. Environmental data layers for elevation and basal area of tree species were used to represent the landscape in terms of habitat and energy resources. We employed the evaludation approach for an organized sequence of model development and analysis, including: data evaluation, conceptual model evaluation, implementation, verification, model output verification (calibration consisting of comparison of parameters informed by nutcracker ecology to real-world empirical values; pattern-oriented modeling − POM), model analysis (sensitivity of model to changes in parameters and processes), and model output corroboration (use of POM to compare model output to real-world patterns from empirical investigations of nutcracker ecology, independent of calibration). Simulations were conducted on alternative nutcracker behavioural-energetic mechanism strategies by assigning different fitness-maximizing goals to agents. We found that an integrated energetic requirement (IER) mechanism, which includes both the short-term and long-term energetic needs of nutcracker agents to be the best-fit scenario. Our results affirm previous research that nutcrackers are responsive to changes in their energetic environment, and that they are capable of projecting energy budgets well into the future. The development of this ABM provides a basis for future research, such as a means to assess the driving conditions necessary for nutcrackers when choosing between a resident and emigrant strategy and as a planning tool to model nutcracker responses to potential landscape changes, which may facilitate long-term WBP conservation.
- Published
- 2017
- Full Text
- View/download PDF
28. Estimating Coarse Woody Debris Volume Using Image Analysis and Multispectral LiDAR
- Author
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Chris Hopkinson, Gregory J. McDermid, Jahan Kariyeva, Gustavo Lopes Queiroz, and Julia Linke
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Canopy ,010504 meteorology & atmospheric sciences ,woody debris ,Multispectral image ,Forest management ,0211 other engineering and technologies ,02 engineering and technology ,woody material ,01 natural sciences ,geobia ,remote sensing ,boreal forest ,Radiometric calibration ,lidar ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,Taiga ,Forestry ,lcsh:QK900-989 ,15. Life on land ,Random forest ,Lidar ,machine learning ,lcsh:Plant ecology ,Environmental science ,Coarse woody debris ,random forest - Abstract
Coarse woody debris (CWD, parts of dead trees) is an important factor in forest management, given its roles in promoting local biodiversity and unique microhabitats, as well as providing carbon storage and fire fuel. However, parties interested in monitoring CWD abundance lack accurate methods to measure CWD accurately and extensively. Here, we demonstrate a novel strategy for mapping CWD volume (m3) across a 4300-hectare study area in the boreal forest of Alberta, Canada using optical imagery and an infra-canopy vegetation-index layer derived from multispectral aerial LiDAR. Our models predicted CWD volume with a coefficient of determination (R2) value of 0.62 compared to field data, and a root-mean square error (RMSE) of 0.224 m3/100 m2. Models using multispectral LiDAR data in addition to image-analysis data performed with up to 12% lower RMSE than models using exclusively image-analysis layers. Site managers and researchers requiring reliable and comprehensive maps of CWD volume may benefit from the presented workflow, which aims to streamline the process of CWD measurement. As multispectral LiDAR radiometric calibration routines are developed and standardized, we expect future studies to benefit increasingly more from such products for CWD detection underneath canopy cover.
- Published
- 2020
29. Mapping Coarse Woody Debris with Random Forest Classification of Centimetric Aerial Imagery
- Author
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Mir Mustafizur Rahman, Guillermo Castilla, Gregory J. McDermid, Gustavo Lopes Queiroz, and Julia Linke
- Subjects
LiDAR ,010504 meteorology & atmospheric sciences ,0211 other engineering and technologies ,02 engineering and technology ,Large woody debris ,01 natural sciences ,random forest classification ,large woody debris ,Forest ecology ,Aerial image ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,coarse woody material ,aerial image ,GEOBIA ,Taiga ,coarse woody debris ,segmentation ,Forestry ,lcsh:QK900-989 ,Snag ,Random forest ,Lidar ,lcsh:Plant ecology ,Environmental science ,Coarse woody debris ,Cartography - Abstract
Coarse woody debris (CWD, large parts of dead trees) is a vital element of forest ecosystems, playing an important role in nutrient cycling, carbon storage, fire fuel, microhabitats, and overall forest structure. However, there is a lack of effective tools for identifying and mapping both standing (snags) and downed (logs) CWD in complex natural settings. We applied a random forest machine learning classifier to detect CWD in centimetric aerial imagery acquired over a 270-hectare study area in the boreal forest of Alberta, Canada. We used a geographic object-based image analysis (GEOBIA) approach in the classification with spectral, spatial, and LiDAR (light detection and ranging)-derived height predictor variables. We found CWD to be detected with great accuracy (93.4 ±, 4.2% completeness and 94.5 ±, 3.2% correctness) when training samples were located within the application area, and with very good accuracy (84.2 ±, 5.2% completeness and 92.2 ±, 3.2% correctness) when training samples were located outside the application area. The addition of LiDAR-derived variables did not increase the accuracy of CWD detection overall (<, 2%), but aided significantly (p <, 0.001) in the distinction between logs and snags. Foresters and researchers interested in CWD can take advantage of these novel methods to produce accurate maps of logs and snags, which will contribute to the understanding and management of forest ecosystems.
- Published
- 2019
- Full Text
- View/download PDF
30. An open-source method of constructing cloud-free composites of forest understory temperature using MODIS
- Author
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Alessandro Montaghi, David N. Laskin, and Gregory J. McDermid
- Subjects
Generalized linear model ,010504 meteorology & atmospheric sciences ,Pixel ,business.industry ,Cloud cover ,0211 other engineering and technologies ,Cloud computing ,02 engineering and technology ,Understory ,01 natural sciences ,Open source ,Earth and Planetary Sciences (miscellaneous) ,Environmental science ,Moderate-resolution imaging spectroradiometer ,Electrical and Electronic Engineering ,Composite material ,business ,Image resolution ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing - Abstract
Surface air temperature (Tair) is a critical driver of ecosystem processes and phenological dynamics, and can be estimated in near-real time with satellite remote sensing. However, persistent cloud cover often creates large spatial and temporal gaps in our observation records. Previous studies have successfully mapped Tair; however, the challenges of mapping forest understory temperatures (Tust) are relatively unexplored. This study describes a methodology for constructing cloud-free composites of Tust at 250 m spatial resolution. We used generalized linear models to correlate daily average Tust with ground-surveyed forest structural characteristics and land surface temperature (LST) obtained from the Moderate Resolution Imaging Spectroradiometer (MODIS). Models were applied to all four daily MODIS overpasses and combined in to a single image to maximize cloud-free spatial coverage. Pixel temperatures within the remaining cloud gaps were estimated using a temporal averaging algorithm that incorpor...
- Published
- 2016
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- View/download PDF
31. Hydrological effects of resource-access road crossings on boreal forested peatlands
- Author
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Richard M. Petrone, Bin Xu, Saraswati Saraswati, Mir Mustafizur Rahman, Gregory J. McDermid, and Maria Strack
- Subjects
Hydrology ,geography ,geography.geographical_feature_category ,Peat ,010504 meteorology & atmospheric sciences ,Water table ,Water flow ,0207 environmental engineering ,Growing season ,02 engineering and technology ,01 natural sciences ,Boreal ,Hydraulic conductivity ,Environmental science ,020701 environmental engineering ,Transect ,Bog ,0105 earth and related environmental sciences ,Water Science and Technology - Abstract
Resource-access road crossings are expected to alter peatland hydrological properties by obstructing surface and sub-surface water flows. We conducted a multi-year study at two boreal peatlands – a forested bog and a shrubby rich fen near Peace River, Alberta – to study the impacts of resource access roads on the hydrology of adjacent peatland. Field measurements (bi-weekly depth to water table and hydraulic head, one-time hydraulic conductivity) during the growing seasons (May-August) of 2016 and 2017 were taken from sampling plots representing: 1) sides of the road (upstream and downstream); 2) distance from the road (obstruction); and 3) distance from culverts. Compared to the growing season average precipitation for the region of 1.8 mm d−1, the study period had very wet conditions in 2016 (3.7 mm d−1) and dry conditions in 2017 (1.1 mm d−1). In contrast to our assumptions, resource access road disturbed the surface and sub-surface water flow at the bog, but the effect was minimal at the fen as the road orientation was nearly parallel to the flow direction at the latter. At the bog, the shallowest depth to water table position was observed at upstream areas closer to the road, when culverts were located >20 m distance from transects. In contrast, when culverts were present
- Published
- 2020
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- View/download PDF
32. Developing Allometric Equations for Estimating Shrub Biomass in a Boreal Fen
- Author
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Maria Strack, Annie He, Mir Mustafizur Rahman, Saraswati Saraswati, Gregory J. McDermid, and Bin Xu
- Subjects
0106 biological sciences ,010504 meteorology & atmospheric sciences ,ved/biology.organism_classification_rank.species ,Tree allometry ,biometry ,Betula pumila ,010603 evolutionary biology ,01 natural sciences ,Alder ,Shrub ,wetlands ,allometric equations ,allometry ,Bog ,peatlands ,0105 earth and related environmental sciences ,geography ,Biomass (ecology) ,geography.geographical_feature_category ,biology ,biomass ,Ecology ,ved/biology ,carbon ,Forestry ,lcsh:QK900-989 ,biology.organism_classification ,shrubs ,Boreal ,lcsh:Plant ecology ,Allometry - Abstract
Allometric equations for estimating aboveground biomass (AGB) from easily measured plant attributes are unavailable for most species common to mid-continental boreal peatlands, where shrubs comprise a large component of the vegetation community. Our study develops allometric equations for three dominant genera found in boreal fens: Alnus spp. (alder), Salix spp. (willow) and Betula pumila (bog birch). Two different types of local equations were developed: (1) individual equations based on genus/phylogeny, and (2) a general equation that pooled all individuals regardless of genera. The general equation had a R2 = 0.97 (n = 82), and was not significantly different (p >, 0.05) than any of the phylogenetic equations. This indicated that a single generalized equation is sufficient in estimating AGB for all three genera occurring in our study area. A closer look at the performance of the general equation revealed that smaller stems were predicted less accurately than larger stems because of the higher variability of leafy biomass found in small individuals. Previously published equations developed in other ecoregions did not perform as well as our local equations.
- Published
- 2018
33. Detection of Coniferous Seedlings in UAV Imagery
- Author
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Corey Feduck, Gregory J. McDermid, and Guillermo Castilla
- Subjects
010504 meteorology & atmospheric sciences ,0211 other engineering and technologies ,Context (language use) ,02 engineering and technology ,01 natural sciences ,seedling detection ,reforestation ,establishment survey ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,Block (data storage) ,multispectral classification ,Sampling (statistics) ,Forestry ,Decision rule ,lcsh:QK900-989 ,15. Life on land ,forest regeneration ,Photogrammetry ,Workflow ,machine learning ,lcsh:Plant ecology ,RGB color model ,Environmental science ,unmanned aerial vehicles ,Test data - Abstract
Rapid assessment of forest regeneration using unmanned aerial vehicles (UAVs) is likely to decrease the cost of establishment surveys in a variety of resource industries. This research tests the feasibility of using UAVs to rapidly identify coniferous seedlings in replanted forest-harvest areas in Alberta, Canada. In developing our protocols, we gave special consideration to creating a workflow that could perform in an operational context, avoiding comprehensive wall-to-wall surveys and complex photogrammetric processing in favor of an efficient sampling-based approach, consumer-grade cameras, and straightforward image handling. Using simple spectral decision rules from a red, green, and blue (RGB) camera, we documented a seedling detection rate of 75.8 % (n = 149), on the basis of independent test data. While moderate imbalances between the omission and commission errors suggest that our workflow has a tendency to underestimate the seedling density in a harvest block, the plot-level associations with ground surveys were very high (Pearson&rsquo, s r = 0.98, n = 14). Our results were promising enough to suggest that UAVs can be used to detect coniferous seedlings in an operational capacity with standard RGB cameras alone, although our workflow relies on seasonal leaf-off windows where seedlings are visible and spectrally distinct from their surroundings. In addition, the differential errors between the pine seedlings and spruce seedlings suggest that operational workflows could benefit from multiple decision rules designed to handle diversity in species and other sources of spectral variability.
- Published
- 2018
34. Discriminating Native and Nonnative Grasses in the Dry Mixedgrass Prairie With MODIS NDVI Time Series
- Author
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Gregory J. McDermid, Brent Smith, and William S. McInnes
- Subjects
Atmospheric Science ,geography ,geography.geographical_feature_category ,Biodiversity ,Forestry ,Vegetation ,15. Life on land ,Pasture ,Grassland ,Normalized Difference Vegetation Index ,Habitat ,Environmental science ,Moderate-resolution imaging spectroradiometer ,Computers in Earth Sciences ,Rangeland ,Remote sensing - Abstract
Separating native grasses from tame pastures is an important mapping exercise that assists in the assessment of biodiversity, delineation of species’ habitat, and appraisal of rangeland health. However, native grasslands (primarily naturally occurring species) and tame pastures (primarily nonnative grasses planted for hay, pasture, or seed) are spectrally similar and therefore difficult to differentiate with traditional remote sensing techniques and with air-photo interpretation. We used seasonal profiles of the normalized difference vegetation index (NDVI) from the Moderate Resolution Imaging Spectroradiometer (MODIS) instruments to examine the separability of native grasslands and tame pastures (where both types employ the C3 photosynthetic pathway) in the Dry Mixedgrass natural subregion of Alberta, Canada. The two classes were found to have different rates of spring green up at the pixel level that allowed for separation with a simple linear discriminant function. We achieved an overall accuracy of 73% ( $\mathrm{n} = 100$ independent test cases) with the MODIS time series—a statistically significant improvement of the photo-interpretation-based Grassland Vegetation Inventory (52%): the current standard for vegetation information in Alberta’s agricultural zone. We also found that the multitemporal method was able to select dates for single-date classifications that provided relatively high classification accuracies (up to 71% overall). In addition to achieving higher levels of overall accuracy than more conventional methods, the MODIS time series produced much more reliable identification of abandoned pastures: formerly planted rangelands that lack many of the visual cues used by photo interpreters.
- Published
- 2015
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35. Google Earth Engine, Open-Access Satellite Data, and Machine Learning in Support of Large-Area Probabilistic Wetland Mapping
- Author
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Jahan Kariyeva, Gregory J. McDermid, Jennifer N. Hird, and Evan R. DeLancey
- Subjects
Topographic Wetness Index ,010504 meteorology & atmospheric sciences ,Computer science ,Science ,0211 other engineering and technologies ,Decision tree ,boosted regression trees ,topographic position index ,Cloud computing ,Wetland ,02 engineering and technology ,computer.software_genre ,01 natural sciences ,Wetland classification ,topographic wetness index ,Environmental monitoring ,wetland classification ,Digital elevation model ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,cloud computing ,machine learning ,Sentinel-1 ,Sentinel-2 ,digital terrain model ,satellite data streams ,geography ,geography.geographical_feature_category ,Database ,business.industry ,Probabilistic logic ,Topographic map ,General Earth and Planetary Sciences ,business ,computer - Abstract
Modern advances in cloud computing and machine-leaning algorithms are shifting the manner in which Earth-observation (EO) data are used for environmental monitoring, particularly as we settle into the era of free, open-access satellite data streams. Wetland delineation represents a particularly worthy application of this emerging research trend, since wetlands are an ecologically important yet chronically under-represented component of contemporary mapping and monitoring programs, particularly at the regional and national levels. Exploiting Google Earth Engine and R Statistical software, we developed a workflow for predicting the probability of wetland occurrence using a boosted regression tree machine-learning framework applied to digital topographic and EO data. Working in a 13,700 km2 study area in northern Alberta, our best models produced excellent results, with AUC (area under the receiver-operator characteristic curve) values of 0.898 and explained-deviance values of 0.708. Our results demonstrate the central role of high-quality topographic variables for modeling wetland distribution at regional scales. Including optical and/or radar variables into the workflow substantially improved model performance, though optical data performed slightly better. Converting our wetland probability-of-occurrence model into a binary Wet-Dry classification yielded an overall accuracy of 85%, which is virtually identical to that derived from the Alberta Merged Wetland Inventory (AMWI): the contemporary inventory used by the Government of Alberta. However, our workflow contains several key advantages over that used to produce the AMWI, and provides a scalable foundation for province-wide monitoring initiatives.
- Published
- 2017
36. A New Method to Map Groundwater Table in Peatlands Using Unmanned Aerial Vehicles
- Author
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Gregory J. McDermid, Julie Lovitt, Mir Mustafizur Rahman, and Maria Strack
- Subjects
Peat ,010504 meteorology & atmospheric sciences ,Water table ,UAV ,Science ,0211 other engineering and technologies ,Terrain ,02 engineering and technology ,photogrammetry ,01 natural sciences ,Multivariate interpolation ,remote sensing ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,Orthophoto ,groundwater table ,peatland ,spatial interpolation ,General Earth and Planetary Sciences ,Environmental science ,Scale (map) ,Surface water ,Groundwater - Abstract
Groundwater level (GWL) and depth to water (DTW) are related metrics aimed at characterizing groundwater-table positions in peatlands, and two of the most common variables collected by researchers working in these ecosystems. While well-established field techniques exist for measuring GWL and DTW, they are generally difficult to scale. In this study, we present a novel workflow for mapping groundwater using orthophotography and photogrammetric point clouds acquired from unmanned aerial vehicles. Our approach takes advantage of the fact that pockets of surface water are normally abundant in peatlands, which we assume to be reflective of GWL in these porous, gently sloping environments. By first classifying surface water and then extracting a sample of water elevations, we can generate continuous models of GWL through interpolation. Estimates of DTW can then be obtained through additional efforts to characterize terrain. We demonstrate our methodology across a complex, 61-ha treed bog in northern Alberta, Canada. An independent accuracy assessment using 31 temporally coincident water-well measurements revealed accuracies (root mean square error) in the 20-cm range, though errors were concentrated in small upland pockets in the study area, and areas of dense tree covers. Model estimates in the open peatland areas were considerably better.
- Published
- 2017
37. Use of Unmanned Aerial Vehicles for Monitoring Recovery of Forest Vegetation on Petroleum Well Sites
- Author
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Gregory J. McDermid, Brian J. Moorman, Jahan Kariyeva, Alessandro Montaghi, Anne C.S. McIntosh, Jennifer N. Hird, and Scott E. Nielsen
- Subjects
010504 meteorology & atmospheric sciences ,reclamation ,Science ,0211 other engineering and technologies ,Point cloud ,02 engineering and technology ,photogrammetry ,vegetation cover ,01 natural sciences ,Vegetation cover ,Bayesian multivariate linear regression ,point clouds ,vegetation structure ,unmanned aerial vehicles ,vegetation height ,ecological recovery ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing ,Vegetation height ,Vegetation ,15. Life on land ,Field (geography) ,Photogrammetry ,Remote sensing (archaeology) ,General Earth and Planetary Sciences ,Environmental science - Abstract
Photogrammetric point clouds (PPCs) provide a source of three-dimensional (3-D) remote sensing data that is well-suited to use over small areas that are within the scope of observation by unmanned aerial vehicles (UAVs). We compared PPC-based structural metrics to traditional ground surveys conducted by field personnel in order to assess the capacity of PPC data to contribute to vegetation-reclamation surveys. We found good statistical agreement between key structural vegetation parameters, such as mean and maximum vegetation height, with PPC metrics successfully predicting most height and tree-diameter metrics using multivariate linear regression. However, PPC metrics were not as useful for estimating ground-measured vegetation cover. We believe that part of the issue lies in the mismatch between PPC- and ground-based measurement approaches, including subjective judgement on behalf of ground crews: a topic that requires more investigation. Our work highlights the emerging value of UAV-based PPCs to complement, and in some cases supplement, traditional ground-based sources of measured vegetation structure.
- Published
- 2017
38. Examination of Fire-Related Succession Within the Dry Mixed-Grass Subregion of Alberta With the Use of MODIS and Landsat
- Author
-
Gregory J. McDermid and Brent Smith
- Subjects
Ecology ,Range (biology) ,Ecological succession ,Management, Monitoring, Policy and Law ,Plant functional type ,Climax species ,Disturbance (ecology) ,Environmental science ,Animal Science and Zoology ,Ecosystem ,Physical geography ,Rangeland ,Fire ecology ,Nature and Landscape Conservation - Abstract
Fire is an important disturbance process historically present across the northern Great Plains. Previous research from northern dry mixed-grass prairie suggests that C4 (warm season) grasses replace C3 (cool season) climax species with increasing fire, particularly in the spring. This hypothesis was tested at a landscape scale at Canadian Forces Base Suffield Alberta, by exploring the relationship between ecosystem states (C3 dominant, C3/C4 codominant, C4 dominant) inferred from a MODIS multitemporal plant functional type classification (pseudo R 2 : 0.598, overall accuracy: 0.74) and interyear fire history digitized from the Landsat archive (1972–2007). Probit regression showed that succession processes were different between range sites, where C4-dominant pixels were positively related to fire ( P R 2 = 1) and completely replaced C3-dominant pixels on loamy range sites after 14 fires in 36 yr. In contrast, C3- and C3/C4-codominant pixels were related with fire on Blowouts range sites ( P R 2 = 1), where C3/C4-codominant pixels replaced C3-dominant pixels with increasing fire. Finally, there were no statistically significant relationships between ecosystem states and fire for Sands range sites. Analysis of recovery showed that after loamy pixels experienced three to six fires in 18 yr followed by 18 yr of rest, C3-dominant pixels were reduced by over 30% compared to unburned pixels. Finally, intrayear fire timing (2001–2009) was explored with the use of Wilcoxon signed-rank tests between the spatial extent of spring and summer fires, with the use of MODIS burned-area data. Results indicate that fires are not limited to the spring season ( P
- Published
- 2014
- Full Text
- View/download PDF
39. The impact of object size on the thematic accuracy of landcover maps
- Author
-
Ana Hernando, Guillermo Castilla, Gregory J. McDermid, and Chunhua Zhang
- Subjects
Thematic map ,Pixel ,Polygon ,General Earth and Planetary Sciences ,Estimator ,Ranging ,Inverse power law ,Object (computer science) ,Cartography ,Image (mathematics) ,Mathematics - Abstract
We recently completed the accuracy assessment of a Landsat-derived landcover polygon layer covering the entire province of Alberta 660,000 km2, Canada, for which we gathered reference information for nearly 5000 randomly selected polygons ranging from two hectares to thousands of hectares in size. This gave us the unique opportunity to quantify, for the first time, how the probability of correctly classifying a landcover object varies with its size. Irrespective of whether they are represented as polygons or as sets of connected pixels with the same label, the classification accuracy of landcover objects decreases as their size decreases, steadily for large and medium sizes, and more dramatically when they are within two orders of magnitude of the pixel size of the input image. We show that this size-dependency is bound to occur whenever the size distribution of landcover objects follows an inverse power law. Our results are consistent with previous studies on related issues, confirm the need to account for size when assessing the accuracy of object-based landcover maps, and cast doubts on the validity of 1 recently proposed object-based accuracy estimators, and 2 landscape pattern analyses where the minimum patch size is close to the pixel size.
- Published
- 2014
- Full Text
- View/download PDF
40. Relationships between grizzly bears and human disturbances in a rapidly changing multi-use forest landscape
- Author
-
Gregory J. McDermid, Gordon B. Stenhouse, Marie-Josée Fortin, and Julia Linke
- Subjects
education.field_of_study ,Disturbance (geology) ,biology ,Ecology ,Grizzly Bears ,Population ,Cumulative effects ,organization ,biology.organism_classification ,organization.mascot ,Geography ,Abundance (ecology) ,Threatened species ,Ursus ,Protected area ,education ,Ecology, Evolution, Behavior and Systematics ,Nature and Landscape Conservation - Abstract
Grizzly bear (Ursus arctos) populations across their range are being threatened by anthropogenic development and associated increases in human-caused mortality. However, details surrounding the impact of cumulative human effects are not yet fully understood, as prior research has focused primarily on habitat selection of individual disturbance features, rather than the spatio-temporal dynamics of aggregated disturbance processes. We used grizzly bear relative-abundance information from a DNA population inventory alongside a GIS database of human footprint dynamics to gain insight into the relationships between human disturbance features and the spatial distribution of grizzly bears in west-central Alberta, Canada: a landscape experiencing heavy resource development. We used candidate model-selection techniques and zero-inflated Poisson regression models to test competing hypotheses about disturbance processes, neighborhood effect and landscape characteristics. The best model explained about 57% of the overall variation in relative grizzly bear abundance. Areas with lower ‘disturbance exposure’ (i.e. high mean distance to new disturbances over time), lower ‘neighborhood disturbance’ (i.e. disturbance density around those areas), and higher ‘availability of regenerating forest’, were associated with higher bear abundance. In addition, areas located further away from an adjacent protected area exhibited a higher probability of ‘excess absences’, accounting indirectly for the cumulative effects of disturbance and the history of human-caused mortality. Our results suggest that managing the spatio-temporal exposure of grizzly bears to new disturbance features may be an important consideration for conserving this species in rapidly changing landscapes.
- Published
- 2013
- Full Text
- View/download PDF
41. Monitoring landscape change in multi-use west-central Alberta, Canada using the disturbance-inventory framework
- Author
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Julia Linke and Gregory J. McDermid
- Subjects
Hydrology ,010504 meteorology & atmospheric sciences ,business.industry ,Fossil fuel ,0211 other engineering and technologies ,Fragmentation (computing) ,Biodiversity ,Coal mining ,Soil Science ,Distribution (economics) ,Geology ,Terrain ,02 engineering and technology ,15. Life on land ,01 natural sciences ,Disturbance (ecology) ,Petroleum industry ,13. Climate action ,Environmental science ,Computers in Earth Sciences ,business ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Remote sensing - Abstract
Human disturbances are a major driver of biodiversity declines world-wide, and the intensely used Alberta forest landscape is no exception to this trend. Monitoring of such large areas is typically conducted via multi-temporal land-cover maps from remote sensing, but automated and efficient procedures for reliable, operational applications have yet to be fully developed. In an effort to contribute to this need, we developed an innovative approach to landscape monitoring: the disturbance-inventory framework, which is applied for the first time as described here to monitor annual changes in an 8800-km2 multi-use landscape in west-central Alberta, Canada. Using this framework, we (1) report on the spatio-temporal distribution of industrial disturbances such as harvesting cutblocks, oil and gas wells, coal mines, and road/pipelines; and (2) track the associated annual changes in land-cover composition and configuration between 1998 and 2005. To enable spatially explicit analyses within the study area, we divided it into 178, 49 km2-square landscape cells. The overall area-based annual rate of change of 0.62% for this multi-use may be considered moderate compared to other regions, where change was mainly shaped by a single use, i.e., forestry. However, the spatially explicit nature of our analysis revealed that the eastern half of the study area is subject to considerably higher rates of change, mainly due to the concurrent appearance of disturbances from forestry and the oil and gas industry. The western half, by contrast, is more restricted by rugged terrain and fewer roads. The average distance to disturbance features across the entire study area decreased from 1500 m to 1200 m over the seven years. Total forest area, mean and largest patch size, and mean shape index all decreased consistently over the same period. The detected rapid change and associated fragmentation call for ongoing monitoring of this and other multi-use landscapes, which could be undertaken using this framework.
- Published
- 2012
- Full Text
- View/download PDF
42. The influence of sampling density on geographically weighted regression: a case study using forest canopy height and optical data
- Author
-
Gang Chen, Kaiguang Zhao, Gregory J. McDermid, and Geoffrey J. Hay
- Subjects
Tree canopy ,Kriging ,Inverse distance weighting ,Ordinary least squares ,Statistics ,Linear model ,General Earth and Planetary Sciences ,Sampling (statistics) ,Satellite imagery ,Regression ,Remote sensing ,Mathematics - Abstract
Geographically weighted regression (GWR) extends the conventional ordinary least squares (OLS) regression technique by considering spatial nonstationarity in variable relationships and allowing the use of spatially varying coefficients in linear models. Previous forest studies have demonstrated the better performance of GWR compared to OLS when calibrated and validated at sampled locations where field measurements are collected. However, the use of GWR for remote-sensing applications requires generating estimates and evaluating the model performance for the large image scene, not just for sampled locations. In this study, we introduce GWR to estimate forest canopy height using high spatial resolution Quickbird (QB) imagery and evaluate the influence of sampling density on GWR. We also examine four commonly used spatial analysis techniques – OLS, inverse distance weighting (IDW), ordinary kriging (OK) and cokriging (COK) – and compare their performance with that using GWR. Results show that (i) GWR outperf...
- Published
- 2011
- Full Text
- View/download PDF
43. Quantifying bias in pattern indices extracted from spatially offset landscape samples
- Author
-
Adam J. McLane, Gregory J. McDermid, Guillermo Castilla, and Julia Linke
- Subjects
Global and Planetary Change ,Geography ,Offset (computer science) ,Ecology ,Forestry - Abstract
Modern ecological models often account for the influence of the surrounding environment by using landscape pattern indices (LPIs) as measures of landscape structure. Ideally, the landscape samples from which these LPIs are ex- tracted should be centered on the locations where the response variable was measured. However, in situations where this is not possible due to a lack of adequate full-coverage landcover data, the question arises as to what degree this circumstance creates a bias in the value of the LPIs, thereby obscuring their relation with the response variable. To address this question, we extracted four representative LPIs from 30 rectangular (3 × 6 km) landscape samples evenly distributed across a 10 000 km 2 boreal forest study area. These rectangles were subjected to systematic displacements across a range of distances (0.5 to 2.5 km) and directions, after which we recomputed the LPIs. We found that a 1 km spatial offset led to an average of 15% deviation of original LPI values. Unfortunately, as the offset increased, the range of resulting deviations also widened, making it difficult to predict this effect. Our findings fill a gap in the literature on landscape pattern analysis and suggest that researchers should avoid LPIs extracted from spatially offset landscape samples. Resume : Les modeles ecologiques modernes tiennent souvent compte de l'influence de l'environnement avoisinant en utili- sant des indices paysagers (IP) comme mesure de la structure du paysage. Les regions pour lesquelles ces IP sont extraits devraient idealement provenir du centre des endroits ou la variable etudiee a ete mesuree. Cependant, dans les cas ou cela n'est pas possible du au manque de donnees qui couvrent adequatement toute la couverture terrestre, la question surgit a sa- voir jusqu'a quel point cette situation cree un biais dans la valeur des IP, obscurcissant ainsi leur relation avec la variable etudiee. Pour aborder cette question, nous avons extrait quatre IP representatifs de 30 echantillons rectangulaires (3 × 6 km) de paysage egalement repartis dans une zone d'etude de 10 000 km 2 de foret boreale. Ces rectangles ont ete soumis a des deplacements systematiques sur une serie de distances (0,5 a 2,5 km) et dans differentes directions apres quoi les IP ont ete recalcules. Nous avons trouve qu'un decalage spatial d'un kilometre entrainait une deviation moyenne de 15 % par rapport aux valeurs d'IP originales. Malheureusement, a mesure que le decalage augmente, la dispersion des deviations qui en re- sulte s'accroit, ce qui rend difficile la prediction de cet effet. Nos resultats comblent une lacune dans la litterature et indi- quent que les chercheurs devraient eviter d'extraire des IP a partir d'echantillons decales de paysage. (Traduit par la Redaction)
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- 2011
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44. A Conceptual Model for Multi-Temporal Landscape Monitoring in an Object-Based Environment
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Gregory J. McDermid and Julia Linke
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Atmospheric Science ,Data processing ,Geographic information system ,Contextual image classification ,business.industry ,Computer science ,media_common.quotation_subject ,computer.software_genre ,Object (computer science) ,Object detection ,Feature (computer vision) ,Conceptual model ,Data mining ,Computers in Earth Sciences ,business ,Spurious relationship ,computer ,media_common - Abstract
Remote sensing plays a critical role in contemporary monitoring programs, but our strategies for processing these data using automated procedures are not always reliable. In particular, the task of separating real from spurious changes remains problematic, especially in an object-based environment where differential errors in classification quality, spatial registration, scene illumination, resolution, and object delineation have forced some operators to adopt labor-intensive visual-interpretation strategies, or employ manual interaction on an object-by-object basis. In this paper, we present an updated summary of our new disturbance-inventory approach to land-cover monitoring that combines object-based classification and change-detection strategies with boundary-conditioning routines designed to maximize the spatial and thematic integrity of the finished products. With this approach, the final maps are only altered in regions of confirmed change, and spurious gaps, slivers, stretches, and encroachments are avoided. The approach constitutes an innovative, efficient, and transparent framework that can handle all the basic landscape dynamics, including feature appearance, disappearance, succession, expansion, and shrinkage, without the need for manual editing.
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- 2011
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45. Landsat-comparable land cover maps using ASTER and SPOT images: a case study for large-area mapping programmes
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Alysha D. Pape, Steven E. Franklin, Gregory J. McDermid, Yuhong He, and Xulin Guo
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Crown closure ,Advanced Spaceborne Thermal Emission and Reflection Radiometer ,General Earth and Planetary Sciences ,Environmental science ,Land cover ,Cartography ,Data availability ,Remote sensing - Abstract
The long-term record of global Landsat data is an important resource for studying Earth's system. Given the identified gaps in Landsat data and the undetermined future status of Landsat data availability, alternatives to Landsat imagery need to be tested in an operational environment. In this study, forest land cover and crown closure maps generated from Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) and System Pour 1'Observation de la Terre (SPOT) data were compared to Landsat-based map products currently in use by the grizzly bear habitat-mapping program. Overall accuracies greater than 85% were obtained for both ASTER-and SPOT-based land cover maps. The ASTER and SPOT classification accuracies were higher than that achieved by Landsat. Crown closure maps derived from ASTER and SPOT data show a small increase in accuracy when compared to the Landsat products. Overall, these results demonstrate that ASTER and SPOT could provide alternative data sources for producing maps in the event of a gap in the Landsat data.
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- 2011
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46. How humans shape wolf behavior in Banff and Kootenay National Parks, Canada
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Marco Musiani, Sk. Morshed Anwar, Gregory J. McDermid, Mark Hebblewhite, and Danielle J. Marceau
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Agent-based model ,biology ,National park ,Ecology ,Ecological Modeling ,Home range ,Patrolling ,biology.organism_classification ,Caniformia ,Geography ,Habitat ,Cartography ,Recreation ,Wildlife conservation - Abstract
This paper describes the conceptualization and implementation of an agent-based model to investigate how varying levels of human presence could affect elements of wolf behavior, including highway crossings; use of areas in proximity to roads and trails; size of home ranges; activities, such as hunting, patrolling, resting, and feeding pups; and survival of individuals in Banff and Kootenay National Parks, Canada. The model consists of a wolf module as the primary component with five packs represented as cognitive agents, and grizzly bear, elk, and human modules that represent dynamic components of the environment. A set of environmental data layers was used to develop a friction model that serves as a base map representing the landscape over which wolves moved. A decision model was built to simulate the sequence of wolf activities. The model was implemented in a Java Programming Language using RePast, an agent-based modeling library. Six months of wolf activities were simulated from April 16 to October 15 (i.e., a season coherent with regard to known wolf behaviors), and calibrated with GPS data from wolf radiocollars (n = 15) deployed from 2002 to 2004. Results showed that the simulated trajectories of wolf movements were correlated with the observed trajectories (Spearman's rho 0.566, P
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- 2010
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47. Disturbance capture and attribution through the integration of Landsat and IRS-1C imagery
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Trisalyn A. Nelson, Benjamin P. Stewart, Michael A. Wulder, and Gregory J. McDermid
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Geography ,Disturbance (geology) ,Thematic Mapper ,General Earth and Planetary Sciences ,Satellite imagery ,Cartography - Abstract
A primary activity required to support sustainable forest management is the detection and mitigation of forest disturbances. These disturbances can be planned, through urbanization and harvesting, or unplanned, through insect infestations or fire. Detection and characterization of disturbance types are important, as different disturbances have different ecological effects and may require unique managerial responses. As such, it is necessary for forest managers to have as complete and current information as possible to support decision making. In this study, we developed a framework to automatically detect and label disturbances derived from remotely sensed images. Disturbances were detected through traditional image differencing of medium-resolution imagery (Landsat-7 Enhanced Thematic Mapper Plus (ETM+), resampled to 30 m) but were refined and augmented through comparison with edge features extracted from high spatial resolution satellite imagery (Indian Remote Sensing (IRS) satellite 1C panchromatic imagery, resampled to 5 m). By incorporating spectral information, derived composite band values (tasselled cap transformations), spatial and contextual information, and secondary datasets, we were able to capture and label disturbance features with a high level of overall agreement (91%). Areal features, such as harvest areas, are captured and labelled more reliably than linear features such as roads, with 92% and 72% agreement when compared with control data, respectively. By incorporating rule-based disturbance attribution with remote sensing change detection, we envision the update of land cover databases with reduced human intervention, aiding more rapid data integration and opportunities for timely managerial responses. Resume´. La detection et l'attenuation des perturbations dans une foret constituent une etape essentielle pour assurer la gestion durable de la foret. Ces perturbations peuvent e planifiees, comme dans le cas de l'urbanisation et de l'exploitation forestiere ou encore, non planifiees suite a des infestations par les insectes ou des incendies. La detection et la caracterisation des divers types de perturbations sont importantes etant donneque ces differentes perturbations entraoˆnent des effets e differents et peuvent exiger des reponses qui leur sont propres en termes de gestion. Ainsi, il est necessaire pour les gestionnaires de la foret de disposer de l'information la plus complete et la plus ajour possible pour soutenir le processus de prise de decision. Dans cette e on developpe une methodologie pour detecter et e automatiquement les perturbations derivees des images de teledetection. Les perturbations ont ed etectees en utilisant la methode traditionnelle de differenciation d'images a moyenne resolution (images ETM+ (« Enhanced Thematic Mapper Plus ») de Landsat-7, re ´-echantillonnees a ` 30 m), quoique celles-ci aient eteraffinees et ameliorees par le biais d'une comparaison avec les caracteristiques de contours extraites d'images satellite ahaute resolution spatiale (images panchromatiques du satellite IRS-1C (« Indian Remote Sensing satellite 1C »), re ´-echantillonnees a 5 m). En integrant l'information spectrale, les valeurs des bandes composites derivees (espace indiciel transforme ´-TCT), l'information spatiale et contextuelle ainsi que des ensembles secondaires de donnees, il a epossible de capturer et d'etiqueter les caracteristiques des perturbations avec un niveau global de concordance e ´ (91 %). Les caracteristiques spatiales, comme la surface des zones de coupe, sont capturees et ees de facon plus fiable que les caracteristiques lineaires telles que les routes, avec une concordance de 92 % et de 72 % respectivement comparativement aux donnees de controle. En integrant l'attribution des perturbations obtenue al'aide d'un systeme a base de regles avec les resultats de la detection des changements par teledetection, on envisage de realiser la mise ajour des bases de donnees du couvert avec une intervention humaine minimale facilitant ainsi l'integration plus rapide des donnees tout en accroissant les capacites de reponse des gestionnaires acourt terme. (Traduit par la Redaction)
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- 2009
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48. Problems in remote sensing of landscapes and habitats
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Yuhong He, Gregory J. McDermid, Steven E. Franklin, Kai Wang, and Xulin Guo
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Geography ,Habitat ,Remote sensing (archaeology) ,Nature Conservation ,Geography, Planning and Development ,Earth and Planetary Sciences (miscellaneous) ,Wildlife ,General Earth and Planetary Sciences ,Resource management ,Natural resource ,Restoration ecology ,Remote sensing - Abstract
Wildlife habitat mapping strongly supports applications in natural resource management, environmental conservation, impacts of anthropogenic activity, perturbed ecosystem restoration, species-at-risk recovery and species inventory. Remote sensing has long been identified as a feasible and effective technology for large-area habitat mapping. However, existing and future uncertainties in remote sensing will definitely have a significant effect on the relevant scientific research. This article attempts to identify the current challenges and opportunities in remote sensing for large-area wildlife habitat mapping, and accordingly provide possible solutions and directions for further research.
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- 2009
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49. A Disturbance-Inventory Framework for Flexible and Reliable Landscape Monitoring
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David N. Laskin, Steven E. Franklin, Adam J. McLane, Julia Linke, Mryka Hall-Beyer, J. Cranston, Gregory J. McDermid, and Alysha D. Pape
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Reliability (computer networking) ,Land cover ,computer.software_genre ,Thematic map ,Geography ,Thematic Mapper ,Environmental monitoring ,Satellite imagery ,Data mining ,Computers in Earth Sciences ,Categorical variable ,Cartography ,computer ,Change detection - Abstract
Remote sensing plays a key role in landscape monitoring, but our handling of these data in a multi-temporal time series is not yet fully developed. Of particular concern is the presence of spatial and thematic errors in independently created maps that distort measures of landscape pattern and constrain the reliability of change analysis. In addition, there is a need to incorporate continuous attributes of cover gradients for flexible map representations that support a variety of applications. In this paper, we present a framework for generating temporally and categorically dynamic land-cover maps that provide such a reliable and adaptable foundation. The centerpiece is a spatio-temporal disturbance-inventory database, created through semi-automated change detection and conditioned with boundary-matching procedures, which can be used to backdate and update both continuous and categorical reference maps. We demonstrate our approach using multi-annual Landsat imagery from a forested region in west-central Alberta, Canada, between the years 1998 and 2005.
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- 2009
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50. Remote sensing and forest inventory for wildlife habitat assessment
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T. Kobliuk, Ronald J. Hall, Ellsworth F. LeDrew, Gregory J. McDermid, G.A. Sanchez-Azofeifa, Gordon B. Stenhouse, and Steven E. Franklin
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0106 biological sciences ,Forest inventory ,Geospatial analysis ,010504 meteorology & atmospheric sciences ,Land use ,Wildlife ,Forestry ,Land cover ,15. Life on land ,Management, Monitoring, Policy and Law ,computer.software_genre ,010603 evolutionary biology ,01 natural sciences ,Environmental data ,Geography ,Forest ecology ,computer ,Spatial analysis ,0105 earth and related environmental sciences ,Nature and Landscape Conservation ,Remote sensing - Abstract
Researchers and managers undertaking wildlife habitat assessments commonly require spatially explicit environmental map layers such as those derived from forest inventory and remote sensing. However, end users of geospatial products must often make choices regarding the source and level of detail required for characterizing habitat elements, with few published resources available for guidance. We appraised three environmental data sources that represent options often available to researchers and managers in wildlife ecological studies: (i) a pre-existing forest inventory; (ii) a general-purpose, singleattribute remote sensing land cover map; and (iii) a specific-purpose, multi-attribute remote sensing database. The three information sources were evaluated with two complementary analyses: the first designed to appraise levels of map quality (assessed on the basis of accuracy, vagueness, completion, consistency, level of measurement, and detail) and the second designed to assess their relative capacity to explain patterns of grizzly bear (Ursus arctos) telemetry locations across a 100,000-km 2 study area in west-central Alberta, Canada. We found the forest inventory database to be reasonably functional in its ability to support resource selection analysis in regions where coverage was available, but overall, the data suffered from quality issues related to completeness accuracy, and consistency. The generalpurpose remote sensing land cover product ranked higher in terms of overall map quality, but demonstrated a lower capacity for explaining observed patterns of grizzly bear habitat use. We found the best results using the specific-purpose, multi-attribute remote sensing database, and recommend that similar information sources be used as the foundation for wildlife habitat studies whenever possible, particularly those involving large areas that span jurisdictional boundaries.
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- 2009
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