240 results on '"Green JE"'
Search Results
2. Efficacy and safety of fecal microbiota transplantation for the treatment of diseases other than Clostridium difficile infection: a systematic review and meta-analysis
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Green, JE, Davis, JA, Berk, M, Hair, C, Loughman, A, Castle, D, Athan, E, Nierenberg, AA, Cryan, JF, Jacka, F, Marx, W, Green, JE, Davis, JA, Berk, M, Hair, C, Loughman, A, Castle, D, Athan, E, Nierenberg, AA, Cryan, JF, Jacka, F, and Marx, W
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The intestinal microbiome has been identified as a key modifier for a variety of health conditions. Fecal Microbiota Transplantation (FMT) has emerged as a fast, safe, and effective means by which to modify the intestinal microbiome and potentially treat a variety of health conditions. Despite extensive research of FMT for CDI, there is a lack of clarity informed by systematic synthesis of data regarding the safety and efficacy of FMT for other health conditions. This systematic review used PRISMA guidelines and was prospectively registered with PROSPERO (CRD42018104243). In March 2020, a search of MEDLINE, EMBASE, and PsycINFO was conducted. We identified 26 eligible studies. A meta-analysis of FMT for active Ulcerative Colitis (UC) showed that FMT significantly improved rates of clinical remission (OR = 3.634, 95% CI = 1.940 to 6.808, I2 = 0%, p < .001), clinical response (OR = 2.634, 95% CI = 1.441 to 4.815, I2 = 33%, p = .002) and endoscopic remission (OR = 4.431, 95% CI = 1.901 to 10.324, I2 = 0%, p = .001). With respect to Irritable Bowel Syndrome, a meta-analysis showed no significant change in symptoms following FMT (p = .739). Hepatic disorders, metabolic syndrome, and antibiotic-resistant organisms were conditions with emerging data on FMT. Serious adverse events (AE) were more often reported in control group participants (n = 43) compared with FMT group participants (n = 26). There were similar rates of mild to moderate AE in both groups. Preliminary data suggest that FMT is a potentially safe, well-tolerated and efficacious treatment for certain conditions other than CDI, with evidence for active UC being the most compelling.
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- 2020
3. Cross-validation of survival associated biomarkers in gastric cancer using transcriptomic data of 1,065 patients
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Szasz, AM, Lanczky, A, Nagy, A, Foerster, S, Hark, K, Green, JE, Boussioutas, A, Busuttil, R, Szabo, A, Gyorffy, B, Szasz, AM, Lanczky, A, Nagy, A, Foerster, S, Hark, K, Green, JE, Boussioutas, A, Busuttil, R, Szabo, A, and Gyorffy, B
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INTRODUCTION: Multiple gene expression based prognostic biomarkers have been repeatedly identified in gastric carcinoma. However, without confirmation in an independent validation study, their clinical utility is limited. Our goal was to establish a robust database enabling the swift validation of previous and future gastric cancer survival biomarker candidates. RESULTS: The entire database incorporates 1,065 gastric carcinoma samples, gene expression data. Out of 29 established markers, higher expression of BECN1 (HR = 0.68, p = 1.5E-05), CASP3 (HR = 0.5, p = 6E-14), COX2 (HR = 0.72, p = 0.0013), CTGF (HR = 0.72, p = 0.00051), CTNNB1 (HR = 0.47, p = 4.3E-15), MET (HR = 0.63, p = 1.3E-05), and SIRT1 (HR = 0.64, p = 2.2E-07) correlated to longer OS. Higher expression of BIRC5 (HR = 1.45, p = 1E-04), CNTN1 (HR = 1.44, p = 3.5E- 05), EGFR (HR = 1.86, p = 8.5E-11), ERCC1 (HR = 1.36, p = 0.0012), HER2 (HR = 1.41, p = 0.00011), MMP2 (HR = 1.78, p = 2.6E-09), PFKB4 (HR = 1.56, p = 3.2E-07), SPHK1 (HR = 1.61, p = 3.1E-06), SP1 (HR = 1.45, p = 1.6E-05), TIMP1 (HR = 1.92, p = 2.2E- 10) and VEGF (HR = 1.53, p = 5.7E-06) were predictive for poor OS. MATERIALS AND METHODS: We integrated samples of three major cancer research centers (Berlin, Bethesda and Melbourne datasets) and publicly available datasets with available follow-up data to form a single integrated database. Subsequently, we performed a literature search for prognostic markers in gastric carcinomas (PubMed, 2012-2015) and re-validated their findings predicting first progression (FP) and overall survival (OS) using uni- and multivariate Cox proportional hazards regression analysis. CONCLUSIONS: The major advantage of our analysis is that we evaluated all genes in the same set of patients thereby making direct comparison of the markers feasible. The best performing genes include BIRC5, CASP3, CTNNB1, TIMP-1, MMP-2, SIRT, and VEGF.
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- 2016
4. Clinical and inflammatory response to bloodstream infections in octogenarians
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Green, JE, Ariathianto, Y, Wong, SM, Aboltins, C, Lim, K, Green, JE, Ariathianto, Y, Wong, SM, Aboltins, C, and Lim, K
- Abstract
BACKGROUND: Given the increasing incidence of bacteraemia causing significant morbidity and mortality in older patients, this study aimed to compare the clinical features, laboratory findings and mortality of patients over the age of 80 to younger adults. METHODS: This study was a retrospective, observational study. Participants were taken to be all patients aged 18 and above with confirmed culture positive sepsis, admitted to a large metropolitan hospital in the year 2010. Measurements taken included patient demographics (accommodation, age, sex, comorbidities), laboratory investigations (white cell count, neutrophil count, C-reactive protein, microbiology results), clinical features (vital signs, presence of localising symptoms, complications, place of acquisition). RESULTS: A total of 1367 patient episodes were screened and 155 met study inclusion criteria. There was no statistically significant difference between likelihood of fever or systolic blood pressure between younger and older populations (p-values of 0.81 and 0.64 respectively). Neutrophil count was higher in the older cohort (p = 0.05). Higher Charlson (J Chronic Dis 40(5):373-383, 1987) comorbidity index, greater age and lower systolic blood pressure were found to be statistically significant predictors of mortality (p-values of 0.01, 0.02 and 0.03 respectively). CONCLUSION: The findings of this study indicate older patients are more likely to present without localising features. However, importantly, there is no significant difference in the likelihood of fever or inflammatory markers. This study also demonstrates the importance of the Charlson Index of Comorbidities (J Chronic Dis 40(5):373-383, 1987) as a predictive factor for mortality, with age and hypotension being less important but statistically significant predictive factors of mortality.
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- 2014
5. Mechanical Behavior of Three-Dimensional Composite Ablative Materials
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Adsit, NR, primary, Carnahan, KR, additional, and Green, JE, additional
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6. Experimental evaluation of impact ionization in dilute nitride GaInNAs diodes
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Tan, SL, Soong, WM, Green, JE, Steer, MJ, Zhang, S, Tan, LJJ, Ng, JS, Marko, IP, Sweeney, SJ, Adams, AR, Allam, J, David, JPR, Tan, SL, Soong, WM, Green, JE, Steer, MJ, Zhang, S, Tan, LJJ, Ng, JS, Marko, IP, Sweeney, SJ, Adams, AR, Allam, J, and David, JPR
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- 2013
7. Abstract P5-04-18: Identification of a novel combination therapy that prevents the metastatic outgrowth and reduces the viability of dormant breast cancer cells: implications for clinical translation
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El Touny, LH, primary, Vieira, A, additional, Mendoza, A, additional, Khanna, C, additional, Hoenerhoff, MJ, additional, and Green, JE, additional
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- 2013
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8. Loss of mammary epithelial prolactin receptor delays tumor formation by reducing cell proliferation in low-grade preinvasive lesions
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Oakes, SR, Robertson, FG, Kench, JG, Gardiner-Garden, M, Wand, MP, Green, JE, Ormandy, CJ, Oakes, SR, Robertson, FG, Kench, JG, Gardiner-Garden, M, Wand, MP, Green, JE, and Ormandy, CJ
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Top quartile serum prolactin levels confer a twofold increase in the relative risk of developing breast cancer. Prolactin exerts this effect at an ill defined point in the carcinogenic process, via mechanisms involving direct action via prolactin receptors within mammary epithelium and/or indirect action through regulation of other hormones such as estrogen and progesterone. We have addressed these questions by examining mammary carcinogenesis in transplants of mouse mammary epithelium expressing the SV40T oncogene, with or without the prolactin receptor, using host animals with a normal endocrine system. In prolactin receptor knockout transplants the area of neoplasia was significantly smaller (7 versus 17%; P<0.001 at 22 weeks and 7 versus 14%; P=0.009 at 32 weeks). Low-grade neoplastic lesions displayed reduced BrdU incorporation rate (11.3 versus 17% P=0.003) but no change in apoptosis rate. Tumor latency increased (289 days versus 236 days, P<0.001). Tumor frequency, growth rate, morphology, cell proliferation and apoptosis were not altered. Thus, prolactin acts directly on the mammary epithelial cells to increase cell proliferation in preinvasive lesions, resulting in more neoplasia and acceleration of the transition to invasive carcinoma. Targeting of mammary prolactin signaling thus provides a strategy to prevent the early progression of neoplasia to invasive carcinoma. © 2007 Nature Publishing Group All rights reserved.
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- 2007
9. Hypertension and renal failure in a patient with tuberous sclerosis
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Zasloff Ma, Green Je, Adams Gw, David M. Koeller, Shawker Th, and Sax Fl
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Adult ,Male ,medicine.medical_specialty ,Noninvasive imaging ,Renal parenchyma ,Renal function ,Disease ,urologic and male genital diseases ,Tuberous sclerosis ,Tuberous Sclerosis ,Internal medicine ,Volume expansion ,medicine ,Humans ,Ultrasonography ,business.industry ,food and beverages ,General Medicine ,medicine.disease ,Magnetic Resonance Imaging ,Blood pressure ,Echocardiography ,Hypertension ,Cardiology ,Kidney Failure, Chronic ,business ,Tomography, X-Ray Computed - Abstract
The cause of hypertension in this patient with tuberous sclerosis appeared to be the result of volume expansion due to renal failure. Renal insufficiency was presumably caused by extensive replacement of renal parenchyma with angiomyolipomas, resulting in compression and distortion of the renal parenchyma. Noninvasive imaging techniques were the most useful for characterizing the extent of the disease. It is clearly important to monitor renal function and blood pressure of patients with tuberous sclerosis as they grow older.
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- 1990
10. Mouse models of human breast cancer: evolution or convolution?
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Green, JE, primary
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- 2003
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11. Cochlear implantation in prelingually deafened adolescents.
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Zeitler DM, Anwar A, Green JE, Babb JS, Friedmann DR, Roland JT Jr, and Waltzman SB
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- 2012
12. Intraoperative neural response telemetry as a predictor of performance.
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Cosetti MK, Shapiro WH, Green JE, Roman BR, Lalwani AK, Gunn SH, Roland JT Jr, and Waltzman SB
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- 2010
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13. Cochlear implantation in children with CHARGE syndrome: therapeutic decisions and outcomes.
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Lanson BG, Green JE, Roland JT Jr, Lalwani AK, and Waltzman SB
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- 2007
14. Altered expression of transforming growth factor βs during urethral and bulbourethral gland tumor progression in transgenic mice carrying the androgen-responsive C3(1) 5' flanking region fused to SV40 large T antigen.
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Shibata, MA, Jorcyk, CL, Devor, DE, Yoshidome, K, Rulong, S, Resau, J, Roche, N, Roberts, AB, Ward, JM, and Green, JE
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We demonstrate that targeted expression of SV40 large T antigen (TAg) to the urethral (periurethral) and bulbourethral gland epithelium leads to adenocarcinoma formation in these tissues after 7 months of age, which are extremely rare sites for spontaneous tumor formation in humans. The development of proliferative lesions in the urethral gland predictably follows a temporal course of progression with approximately one third of male animals developing urethral tumors by 1 year of age. Tumor progression in these organs correlates to the level of TAg and p53 expression. Immunoprecipitation confirmed that SV40 TAg protein was bound to p53 and Rb p110 in vivo. Expression of transforming growth factor β (TGFβs) was evaluated during tumor progression of urethral gland carcinomas. Elevations of intracellular and extracellular TGFβ1 and extracellular TGFβ3 were found in preneoplastic and neoplastic lesions, suggesting that increased TGFβs may augment tumor growth. c-Met expression showed a tendency for increased expression in the urethral gland carcinomas. We speculate that the directed expression of SV40 TAg by the hormone responsive C3(1) gene and subsequent tumor formation in these organs is influenced by androgens, since these tissues and carcinomas express androgen receptor (AR) and arise only in male transgenic mice. Several cell lines established from the urethral carcinomas were also shown to express AR, but are not androgen dependent in cultures. To our knowledge, this is the first transgenic animal model for urethral and bulbourethral carcinomas. This transgenic mouse model and the cell lines derived from it may provide a unique opportunity for dissecting molecular mechanisms involved in the tumorigenesis of these organs which otherwise rarely develop cancer. [ABSTRACT FROM PUBLISHER]
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- 1998
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15. Towards extracting the timelike pion form factor on CLS twoflavour ensembles
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Erben Felix, Green Jeremy, Mohler Daniel, and Wittig Hartmut
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Physics ,QC1-999 - Abstract
Results are presented from an ongoing study of the ρ resonance. The focus is on CLS 2-flavour ensembles generated using O(a) improved Wilson fermions with pion masses ranging from 265 to 437 MeV. The energy levels are extracted by solving the GEVP of correlator matrices, created with the distillation approach involving ρ and ππ interpolators. The study is done in the centre-of-mass frame and several moving frames. One aim of this work is to extract the timelike pion form factor after applying the Lüscher formalism. We therefore plan to integrate this study with the existing Mainz programme for the calculation of the hadronic vacuum polarization contribution to the muon g – 2.
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- 2018
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16. Light-by-light forward scattering amplitudes in Lattice QCD
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Gérardin Antoine, Green Jeremy, Gryniuk Oleksii, von Hippel Georg, Meyer Harvey B., Pascalutsa Vladimir, and Wittig Hartmut
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Physics ,QC1-999 - Abstract
We present our preliminary results on the calculation of hadronic light-by-light forward scattering amplitudes using vector four-point correlation functions computed on the lattice. Using a dispersive approach, forward scattering amplitudes can be described by γ*γ* → hadrons fusion cross sections and then compared with phenomenology. We show that only a few states are needed to reproduce our data. In particular, the sum rules considered in this study imply relations between meson–γγ couplings and provide valuable information about individual form factors which are often used to estimate the meson-pole contributions to the hadronic light-by-light contribution to the (g – 2) of the muon.
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- 2018
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17. Hadronic light-by-light scattering contribution to the muon g – 2 on the lattice
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Asmussen Nils, Gérardin Antoine, Green Jeremy, Gryniuk Oleksii, von Hippel Georg, Meyer Harvey B., Nyffeler Andreas, Pascalutsa Vladimir, and Wittig Hartmut
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Physics ,QC1-999 - Abstract
We briefly review several activities at Mainz related to hadronic light-by-light scattering (HLbL) using lattice QCD. First we present a position-space approach to the HLbL contribution in the muon g̅2, where we focus on exploratory studies of the pion-pole contribution in a simple model and the lepton loop in QED in the continuum and in infinite volume. The second part describes a lattice calculation of the double-virtual pion transition form factor Fπ0γ*γ* (q21; q21) in the spacelike region with photon virtualities up to 1.5 GeV2 which paves the way for a lattice calculation of the pion-pole contribution to HLbL. The third topic involves HLbL forward scattering amplitudes calculated in lattice QCD which can be described, using dispersion relations (HLbL sum rules), by γ*γ* → hadrons fusion cross sections and then compared with phenomenological models.
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- 2018
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18. Josh's Battery – a more even relationship with the grid★
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Byrne Josh, Taylor Mark, and Green Jemma
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Energy conservation ,TJ163.26-163.5 ,Renewable energy sources ,TJ807-830 - Abstract
Josh's House is a “living laboratory” research and demonstration project in the Perth suburb of Hilton, Western Australia. The scope of Josh's House included the design and construction of two energy efficient family homes that achieved the highest level, 10-stars (estimated thermal load: 4 MJ/m2/year) [Australian Government Department of Environment, Star rating scale overview, 2015 (Online), http://www.nathers.gov.au/owners-and-builders/star-rating-scale-overview, accessed on: 2017/17/07], under the Nationwide House Energy Rating Scheme. The project partners include the Co-operative Research Centre for Low Carbon Living and Curtin University. In mid-2015, a further research component was added to Josh's House involving the installation and ongoing monitoring of a battery storage system. This system is a domestic example of a distributed energy storage system (DESS) and is here referred to “Josh's Battery” or “the DESS”. The aim of the project is, in the first instance, to make domestic DESS data publicly available. Broader project objectives are to trial the technology, test assumptions on performance, document and communicate lessons and outcomes, and to inform further research and development. This paper provides an analysis of the monitoring data produced during the energy storage system's first year of operation. Particular areas of interest include: interaction with the electricity grid before and after installation of the storage system; correlation of system performance to specifications and modelled predictions; anomalies and unexpected results; and lessons learned from the installation and operation of the system. Implications and influences. The significance of this research is that it is built around the first monitored, grid connected domestic energy storage system in the Perth metropolitan area. It provides unprecedented data on how these systems can be expected to operate when embedded into a large-scale electricity network. The project also gives the opportunity to test some fundamental assumptions about these systems and feed into policy and business case development for the distributed energy storage sector, more broadly.
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- 2017
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19. miRNA signature associated with outcome of gastric cancer patients following chemotherapy
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Kim Chang, Kim Hark K, Rettig R Luke, Kim Joseph, Lee Eunbyul T, Aprelikova Olga, Choi Il J, Munroe David J, and Green Jeffrey E
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Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background Identification of patients who likely will or will not benefit from cytotoxic chemotherapy through the use of biomarkers could greatly improve clinical management by better defining appropriate treatment options for patients. microRNAs may be potentially useful biomarkers that help guide individualized therapy for cancer because microRNA expression is dysregulated in cancer. In order to identify miRNA signatures for gastric cancer and for predicting clinical resistance to cisplatin/fluorouracil (CF) chemotherapy, a comprehensive miRNA microarray analysis was performed using endoscopic biopsy samples. Methods Biopsy samples were collected prior to chemotherapy from 90 gastric cancer patients treated with CF and from 34 healthy volunteers. At the time of disease progression, post-treatment samples were additionally collected from 8 clinical responders. miRNA expression was determined using a custom-designed Agilent microarray. In order to identify a miRNA signature for chemotherapy resistance, we correlated miRNA expression levels with the time to progression (TTP) of disease after CF therapy. Results A miRNA signature distinguishing gastric cancer from normal stomach epithelium was identified. 30 miRNAs were significantly inversely correlated with TTP whereas 28 miRNAs were significantly positively correlated with TTP of 82 cancer patients (P Conclusions We have identified 1) a miRNA expression signature that distinguishes gastric cancer from normal stomach epithelium from healthy volunteers, and 2) a chemoreresistance miRNA expression signature that is correlated with TTP after CF therapy. The chemoresistance miRNA expression signature includes several miRNAs previously shown to regulate apoptosis in vitro, and warrants further validation.
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- 2011
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20. Distinctions in gastric cancer gene expression signatures derived from laser capture microdissection versus histologic macrodissection
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Choi Il, Korolevich Susie, Kim Joseph, Kim Hark, Kim Chang, Munroe David J, and Green Jeffrey E
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Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background Gastric cancer samples obtained by histologic macrodissection contain a relatively high stromal content that may significantly influence gene expression profiles. Differences between the gene expression signature derived from macrodissected gastric cancer samples and the signature obtained from isolated gastric cancer epithelial cells from the same biopsies using laser-capture microdissection (LCM) were evaluated for their potential experimental biases. Methods RNA was isolated from frozen tissue samples of gastric cancer biopsies from 20 patients using both histologic macrodissection and LCM techniques. RNA from LCM was subject to an additional round of T7 RNA amplification. Expression profiling was performed using Affymetrix HG-U133A arrays. Genes identified in the expression signatures from each tissue processing method were compared to the set of genes contained within chromosomal regions found to harbor copy number aberrations in the tumor samples by array CGH and to proteins previously identified as being overexpressed in gastric cancer. Results Genes shown to have increased copy number in gastric cancer were also found to be overexpressed in samples obtained by macrodissection (LS P value < 10-5), but not in array data generated using microdissection. A set of 58 previously identified genes overexpressed in gastric cancer was also enriched in the gene signature identified by macrodissection (LS P < 10-5), but not in the signature identified by microdissection (LS P = 0.013). In contrast, 66 genes previously reported to be underexpressed in gastric cancer were enriched in the gene signature identified by microdissection (LS P < 10-5), but not in the signature identified by macrodissection (LS P = 0.89). Conclusions The tumor sampling technique biases the microarray results. LCM may be a more sensitive collection and processing method for the identification of potential tumor suppressor gene candidates in gastric cancer using expression profiling.
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- 2011
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21. Incarceration as a key variable in racial disparities of asthma prevalence
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Green Jeremy and Wang Emily A
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Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Despite the disproportionate incarceration of minorities in the United States, little data exist investigating how being incarcerated contributes to persistent racial/ethnic disparities in chronic conditions. We hypothesized that incarceration augments disparities in chronic disease. Methods Using data from the New York City Health and Nutrition Examination Study, a community-based survey of 1999 adults, we first estimated the association between having a history of incarceration and the prevalence of asthma, diabetes, hypertension using propensity score matching methods. Propensity scores predictive of incarceration were generated using participant demographics, socioeconomic status, smoking, excessive alcohol and illicit drug use, and intimate partner violence. Among those conditions associated with incarceration, we then performed mediation analysis to explore whether incarceration mediates racial/ethnic disparities within the disease. Results Individuals with a history of incarceration were more likely to have asthma compared to those without (13% vs. 6%, p < 0.05) and not more likely to have diabetes or hypertension, after matching on propensity scores. Statistical mediation analysis revealed that increased rates of incarceration among Blacks partially contribute to the racial disparity in asthma prevalence. Conclusion Having been incarcerated may augment racial disparities in asthma among NYC residents. Eliminating health disparities should include a better understanding of the role of incarceration and criminal justice policies in contributing to these disparities.
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- 2010
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22. Rapid spread of complex change: a case study in inpatient palliative care
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Filipski Marta I, Rice Jennifer, Neuwirth Esther B, Martel Helene, Penna Richard, Green Jennifer, and Bellows Jim
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Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Based on positive findings from a randomized controlled trial, Kaiser Permanente's national executive leadership group set an expectation that all Kaiser Permanente and partner hospitals would implement a consultative model of interdisciplinary, inpatient-based palliative care (IPC). Within one year, the number of IPC consultations program-wide increased almost tenfold from baseline, and the number of teams nearly doubled. We report here results from a qualitative evaluation of the IPC initiative after a year of implementation; our purpose was to understand factors supporting or impeding the rapid and consistent spread of a complex program. Methods Quality improvement study using a case study design and qualitative analysis of in-depth semi-structured interviews with 36 national, regional, and local leaders. Results Compelling evidence of impacts on patient satisfaction and quality of care generated 'pull' among adopters, expressed as a remarkably high degree of conviction about the value of the model. Broad leadership agreement gave rise to sponsorship and support that permeated the organization. A robust social network promoted knowledge exchange and built on an existing network with a strong interest in palliative care. Resource constraints, pre-existing programs of a different model, and ambiguous accountability for implementation impeded spread. Conclusions A complex, hospital-based, interdisciplinary intervention in a large health care organization spread rapidly due to a synergy between organizational 'push' strategies and grassroots-level pull. The combination of push and pull may be especially important when the organizational context or the practice to be spread is complex.
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- 2009
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23. Three microarray platforms: an analysis of their concordance in profiling gene expression
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Petersen David, Chandramouli GVR, Geoghegan Joel, Hilburn Joanne, Paarlberg Jonathon, Kim Chang, Munroe David, Gangi Lisa, Han Jing, Puri Raj, Staudt Lou, Weinstein John, Barrett J Carl, Green Jeffrey, and Kawasaki Ernest S
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Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Microarrays for the analysis of gene expression are of three different types: short oligonucleotide (25–30 base), long oligonucleotide (50–80 base), and cDNA (highly variable in length). The short oligonucleotide and cDNA arrays have been the mainstay of expression analysis to date, but long oligonucleotide platforms are gaining in popularity and will probably replace cDNA arrays. As part of a validation study for the long oligonucleotide arrays, we compared and contrasted expression profiles from the three formats, testing RNA from six different cell lines against a universal reference standard. Results The three platforms had 6430 genes in common. In general, correlation of gene expression levels across the platforms was good when defined by concordance in the direction of expression difference (upregulation or downregulation), scatter plot analysis, principal component analysis, cell line correlation or quantitative RT-PCR. The overall correlations (r values) between platforms were in the range 0.7 to 0.8, as determined by analysis of scatter plots. When concordance was measured for expression ratios significant at p-values of Conclusion Our results indicate that the long oligonucleotide platform is highly suitable for expression analysis and compares favorably with the cDNA and short oligonucleotide varieties. All three platforms can give similar and reproducible results if the criterion is the direction of change in gene expression and minimal emphasis is placed on the magnitude of change.
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- 2005
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24. 5-HTP inhibits eosinophilia via intracellular endothelial 5-HTRs; SNPs in 5-HTRs associate with asthmatic lung function.
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Walker MT, Bloodworth JC, Kountz TS, McCarty SL, Green JE, Ferrie RP, Campbell JA, Averill SH, Beckman KB, Grammer LC, Eng C, Avila PC, Farber HJ, Rodriguez-Cintron W, Rodriguez-Santana JR, Serebrisky D, Thyne SM, Seibold MA, Burchard EG, Kumar R, and Cook-Mills JM
- Abstract
Background: Previous research showed that 5-hydroxytryptophan (5HTP), a metabolic precursor of serotonin, reduces allergic lung inflammation by inhibiting eosinophil migration across endothelial monolayers., Objective: It is unknown if serotonin receptors are involved in mediating this 5HTP function or if serotonin receptor (HTR) single nucleotide polymorphisms (SNPs) associate with lung function in humans., Methods: Serotonin receptor subtypes were assessed by qPCR, western blot, confocal microscopy, pharmacological inhibitors and siRNA knockdown. HTR SNPs were assessed in two cohorts., Results: Pharmacological inhibition or siRNA knockdown of the serotonin receptors HTR1A or HTR1B in endothelial cells abrogated the inhibitory effects of 5HTP on eosinophil transendothelial migration. In contrast, eosinophil transendothelial migration was not inhibited by siRNA knockdown of HTR1A or HTR1B in eosinophils. Surprisingly, these HTRs were intracellular in endothelial cells and an extracellular supplementation with serotonin did not inhibit eosinophil transendothelial migration. This is consistent with the inability of serotonin to cross membranes, the lack of selective serotonin reuptake receptors on endothelial cells, and the studies showing minimal impact of selective serotonin reuptake inhibitors on asthma. To extend our HTR studies to humans with asthma, we examined the CHIRAH and GALA cohorts for HTR SNPs that affect HTR function or are associated with behavior disorders. A polygenic index of SNPs in HTRs was associated with lower lung function in asthmatics., Conclusions: Serotonin receptors mediate 5HTP inhibition of transendothelial migration and HTR SNPs associate with lower lung function. These results may serve to aid in design of novel interventions for allergic inflammation., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (© 2024 Walker, Bloodworth, Kountz, McCarty, Green, Ferrie, Campbell, Averill, Beckman, Grammer, Eng, Avila, Farber, Rodriguez-Cintron, Rodriguez-Santana, Serebrisky, Thyne, Seibold, Burchard, Kumar and Cook-Mills.)
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- 2024
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25. Collaborating With Community Partners to Address Population Health in an Online Advanced Nursing Practice Course.
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Watts T and Green JE
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- Humans, Nursing Education Research, Students, Students, Nursing, Education, Nursing, Baccalaureate
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Background: Engaging in effective community partnerships is a core competency for advanced nursing practice., Purpose: To describe a semester-long population health project that involved collaboration with a community partner in an online and asynchronous advanced nursing practice course and to evaluate students' perceptions of their community partner collaboration., Methods: At the beginning of the course, students selected health topics and community partners. Perceptions of the collaboration were evaluated in a survey. Data were analyzed using descriptive statistics and content analysis., Results: Approximately 59% of the students found the community partnership was very valuable. Barriers for working with community partners included reluctancy, feeling like a burden, and challenges with scheduling. Facilitators for working with community partners included receiving support on the project, gaining new perspectives, and the collaborative relationship., Conclusions: Community partnership assignments on population health projects can support students in obtaining skills on effective community partnerships while they are in their education programs., Competing Interests: The authors declare no conflicts of interest., (Copyright © 2023 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2023
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26. Striking efficacy of a vaccine targeting TOP2A for triple-negative breast cancer immunoprevention.
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Lee SB, Pan J, Xiong D, Palen K, Johnson B, Lubet RA, Shoemaker RH, Green JE, Fernando RI, Sei S, You M, and Wang Y
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Triple-negative breast cancer (TNBC) is an aggressive subtype of breast cancer that has a poor prognosis. TOP2A is a key enzyme in DNA replication and is a therapeutic target for breast and other cancers. TOP2A-specific Th1-promoting epitopes with optimal binding affinity to MHC II were identified using a combined scoring system. The multi-peptide TOP2A vaccine elicited a robust immunologic response in immunized mice, as demonstrated by the significant production of Th1 cytokines from immunized animals' splenocytes stimulated in vitro with TOP2A peptides. Anti-tumor efficacy of the TOP2A vaccine was demonstrated in a syngeneic TNBC mouse model, in which pre-graft preventive vaccination was associated with significantly decreased tumor growth as compared to adjuvant control. In a genetically engineered mouse (GEM) model of TNBC, vaccinated animals demonstrated a significant reduction in tumor incidence and average tumor volume compared to adjuvant control. Finally, we examined TCR sequences in CD4 tumor Infiltrating lymphocytes (TIL) from vaccinated mice and found that the TIL contained TCR sequences specific to the three vaccine peptides. These data indicate that our newly developed multi-peptide TOP2A vaccine is highly immunogenic, elicits TILs with vaccine specific TCRs, and is highly effective in preventing and intercepting TNBC development and progression in vivo., (© 2023. Nature Publishing Group UK.)
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- 2023
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27. Feasibility, Acceptability, and Safety of Faecal Microbiota Transplantation in the Treatment of Major Depressive Disorder: A Pilot Randomized Controlled Trial.
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Green JE, Berk M, Mohebbi M, Loughman A, McGuinness AJ, Castle D, Chatterton ML, Perez J, Strandwitz P, Athan E, Hair C, Nierenberg AA, Cryan JF, and Jacka F
- Subjects
- Adult, Humans, Pilot Projects, Feasibility Studies, Quality of Life, Treatment Outcome, Double-Blind Method, Fecal Microbiota Transplantation adverse effects, Fecal Microbiota Transplantation methods, Depressive Disorder, Major therapy
- Abstract
Objectives: Perturbations of the intestinal microbiota have been associated with mental health disorders, including major depressive disorder (MDD). Therefore, faecal microbiota transplantation (FMT) holds promise as a microbiota-modulating treatment for MDD. Yet, to date, there are no published controlled studies evaluating the use of FMT for MDD. This study aimed to address this gap by evaluating the feasibility, acceptability, and safety of FMT for MDD., Methods: The study was an 8-week, double-blind, 2:1 parallel group, randomized controlled pilot trial ( n = 15) of enema-delivered FMT ( n = 10) compared with a placebo enema ( n = 5) in adults with moderate-to-severe MDD., Results: Recruitment was completed within 2 months, with 0% attrition and 100% attendance at key study appointments. There were no major protocol deviations. The placebo and blinding strategies were considered successful; nurses and participants correctly guessing their treatment allocation at a rate similar to that anticipated by chance. No serious or severe adverse events were reported in either group, and there were no significant differences in mild-to-moderate adverse events between groups (median of 2 adverse events per participant reported in both groups). Furthermore, the 12/15 participants who completed the Week 2 participant satisfaction survey agreed or strongly agreed that the enema delivery was tolerable and that they would have the treatment again if required. Whilst the study was not designed to measure clinical outcomes, exploratory data also suggested that the active FMT treatment may lead to improvements in gastrointestinal symptoms and quality of life in this population, noting that irritable bowel syndrome is commonly comorbid with MDD., Conclusions: All feasibility targets were met or exceeded. This study found that enema-delivered FMT is feasible, acceptable, well-tolerated, and safe in patients with MDD. The findings of this study support further research to evaluate clinical efficacy, and the use of this protocol is supported.
- Published
- 2023
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28. Safety and feasibility of faecal microbiota transplant for major depressive disorder: study protocol for a pilot randomised controlled trial.
- Author
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Green JE, McGuinness AJ, Berk M, Castle D, Athan E, Hair C, Strandwitz P, Loughman A, Nierenberg AA, Cryan JF, Mohebbi M, and Jacka F
- Abstract
Background: Mental disorders, including major depressive disorder (MDD), are a leading cause of non-fatal burden of disease globally. Current conventional treatments for depression have significant limitations, and there have been few new treatments in decades. The microbiota-gut-brain-axis is now recognised as playing a role in mental and brain health, and promising preclinical and clinical data suggest Faecal Microbiota Transplants (FMT) may be efficacious for treating a range of mental illnesses. However, there are no existing published studies in humans evaluating the efficacy of FMT for MDD., Methods and Design: This protocol describes an 8-week, triple-blind, 2:1 parallel group, randomised controlled pilot trial (n = 15), of enema-delivered FMT treatment (n = 10) compared with a placebo enema (n = 5) in adults with moderate-to-severe MDD. There will be a further 26-week follow-up to monitor longer-term safety. Participants will receive four FMT or placebo enemas over four consecutive days. The primary aims of the study are to evaluate feasibility and safety of FMT as an adjunctive treatment for MDD in adults. Changes in gut microbiota will be assessed as a secondary outcome. Other data will be collected, including changes in depression and anxiety symptoms, and safety parameters., Discussion: Modification of the microbiota-gut-brain axis via FMT is a promising potential treatment for MDD, but there are no published rigorous clinical trials evaluating its use. If this study finds that our FMT strategy is safe and feasible, a larger fully powered RCT is planned. Further high-quality research in this field is urgently needed to address unmet need., Trial Registration: Australian and New Zealand Clinical Trials Registry: ACTRN12621000932864., (© 2023. The Author(s).)
- Published
- 2023
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29. FMT for psychiatric disorders: Following the brown brick road into the future.
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Green JE, Berk M, Loughman A, Marx W, Castle D, McGuinness AJ, Cryan JF, Nierenberg AA, Athan E, Hair C, and Jacka F
- Subjects
- Humans, Bipolar Disorder, Mental Disorders therapy
- Published
- 2021
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30. A Phase II Single Arm Pilot Study of the CHK1 Inhibitor Prexasertib (LY2606368) in BRCA Wild-Type, Advanced Triple-Negative Breast Cancer.
- Author
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Gatti-Mays ME, Karzai FH, Soltani SN, Zimmer A, Green JE, Lee MJ, Trepel JB, Yuno A, Lipkowitz S, Nair J, McCoy A, and Lee JM
- Subjects
- Antineoplastic Combined Chemotherapy Protocols therapeutic use, Humans, Pilot Projects, Pyrazines, Pyrazoles, Triple Negative Breast Neoplasms drug therapy, Triple Negative Breast Neoplasms genetics
- Abstract
Lessons Learned: Monotherapy with prexasertib demonstrated modest activity in BRCA wild-type, recurrent triple-negative breast cancer, highlighting the unmet need for combination treatment strategies. Neutropenia, anemia, and thrombocytopenia are common with the use of prexasertib but are manageable with supportive care measures. Prophylactic use of granulocyte colony stimulating factor should be considered to avoid dose reductions or treatment delays. Pharmacodynamic studies showed prexasertib treatment induced DNA damage in peripheral immune cells., Background: Cell cycle checkpoint kinase 1 (CHK1) is a major G2/M cell cycle regulator in tumors with p53 dysfunction, such as triple-negative breast cancer (TNBC). We hypothesized the second-generation CHK1 inhibitor, prexasertib, would yield clinical activity in sporadic TNBC., Methods: This single arm, phase II trial evaluated prexasertib at 105 mg/m
2 IV every 2 weeks in patients with metastatic/recurrent TNBC. The primary endpoint was overall response rate (ORR)., Results: All nine patients enrolled were germline BRCA wild-type (BRCAwt) and had at least one prior treatment. One partial response (PR) was observed (ORR of 11.1%). Four patients experienced stable disease. The median progression-free survival (PFS) was 86 days (range 17 to 159 days). Grade 3/4 treatment-related adverse events included afebrile neutropenia (n = 8; 88.9%), anemia (n = 3; 33.3%), and thrombocytopenia (n = 1; 11.1%). Pharmacodynamic studies showed prexasertib treatment induced DNA damage in peripheral immune cells and demonstrated a decrease in activated/reinvigorated CD8 T cells; however, the one patient with a PR showed evidence of T-cell recovery., Conclusion: Prexasertib monotherapy had modest clinical efficacy in BRCAwt TNBC. Further studies of prexasertib in combination with other agents are needed., (Published 2020. This article is a U.S. Government work and is in the public domain in the USA.)- Published
- 2020
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31. Efficacy and safety of fecal microbiota transplantation for the treatment of diseases other than Clostridium difficile infection: a systematic review and meta-analysis.
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Green JE, Davis JA, Berk M, Hair C, Loughman A, Castle D, Athan E, Nierenberg AA, Cryan JF, Jacka F, and Marx W
- Subjects
- Drug Resistance, Bacterial genetics, Fecal Microbiota Transplantation adverse effects, Gastrointestinal Microbiome physiology, Humans, Treatment Outcome, Colitis, Ulcerative therapy, Fecal Microbiota Transplantation methods, Irritable Bowel Syndrome therapy, Liver Diseases therapy, Metabolic Syndrome therapy, Obesity therapy
- Abstract
The intestinal microbiome has been identified as a key modifier for a variety of health conditions. Fecal Microbiota Transplantation (FMT) has emerged as a fast, safe, and effective means by which to modify the intestinal microbiome and potentially treat a variety of health conditions. Despite extensive research of FMT for CDI, there is a lack of clarity informed by systematic synthesis of data regarding the safety and efficacy of FMT for other health conditions. This systematic review used PRISMA guidelines and was prospectively registered with PROSPERO (CRD42018104243). In March 2020, a search of MEDLINE, EMBASE, and PsycINFO was conducted. We identified 26 eligible studies. A meta-analysis of FMT for active Ulcerative Colitis (UC) showed that FMT significantly improved rates of clinical remission (OR = 3.634, 95% CI = 1.940 to 6.808, I
2 = 0%, p < .001), clinical response (OR = 2.634, 95% CI = 1.441 to 4.815, I2 = 33%, p = .002) and endoscopic remission (OR = 4.431, 95% CI = 1.901 to 10.324, I2 = 0%, p = .001). With respect to Irritable Bowel Syndrome, a meta-analysis showed no significant change in symptoms following FMT ( p = .739). Hepatic disorders, metabolic syndrome, and antibiotic-resistant organisms were conditions with emerging data on FMT. Serious adverse events (AE) were more often reported in control group participants (n = 43) compared with FMT group participants (n = 26). There were similar rates of mild to moderate AE in both groups. Preliminary data suggest that FMT is a potentially safe, well-tolerated and efficacious treatment for certain conditions other than CDI, with evidence for active UC being the most compelling.- Published
- 2020
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32. From Bimodal Hearing to Sequential Bilateral Cochlear Implantation in Children-A Within-Subject Comparison.
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Deep NL, Green JE, Chen S, Shapiro WH, McMenomey SO, Thomas Roland J Jr, and Waltzman SB
- Subjects
- Child, Hearing, Humans, Retrospective Studies, Treatment Outcome, Cochlear Implantation, Cochlear Implants, Speech Perception
- Abstract
Objective: To evaluate the performance changes after sequential bilateral cochlear implantation in a pediatric population of bimodal cochlear implant (CI) users. To evaluate the factors which influence the parental and recipient decision to discontinue hearing aid use and seek a second implant., Study Design: Retrospective case review, within-subject comparison., Setting: Tertiary referral center., Patients: Thirty-one pediatric (<18 yr) bimodal CI users who underwent sequential bilateral CI., Interventions: Sequential bilateral CI., Main Outcome Measures: Parental and/or recipient's reasons for discontinuing their hearing aid and pursuing a second implant, device usage from datalogs, speech understanding in the bimodal and bilateral CI condition., Results: Parents/patients were motivated to pursue sequential bilateral CI based on their positive performance with CI1, the expectation of further improvement with a second CI, and the prospect of having a second independently functional ear. In the bimodal condition, mean word recognition score (WRS), sentence recognition in quiet (SIQ), and sentence recognition in noise (SIN) scores were 87.4, 97.3, and 92.9% respectively. At 1-year post-sequential bilateral CI, the mean WRS, SIQ, and SIN score were 92.7, 98.7, and 97.7%, respectively. The improvement in bilateral CI speech scores compared with bimodal scores was statistically significant for WRS (p = 0.015). A ceiling effect limited the ability to detect further meaningful differences on speech perception testing., Conclusions: The bilateral CI condition demonstrates equivalent or slightly superior performance compared with the bimodal condition. Several non-speech benefits were elicited from parents as reasons for pursuing a second implant. Close monitoring of the residual acoustic hearing, inquiring about the perceived benefits provided by the HA, and early counseling regarding the potential for sequential bilateral CI are important aspects in determining if and when a second implant is indicated.
- Published
- 2020
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33. Loss of function Cbl-c mutations in solid tumors.
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Daniels SR, Liyasova M, Kales SC, Nau MM, Ryan PE, Green JE, and Lipkowitz S
- Subjects
- Amino Acid Sequence, Animals, Antigens, Viral, Tumor genetics, Base Sequence, Cell Transformation, Neoplastic genetics, Female, HEK293 Cells, Humans, Male, Mammary Neoplasms, Experimental genetics, Mice, Mice, Transgenic, Mutant Proteins chemistry, Mutant Proteins genetics, Mutant Proteins metabolism, NIH 3T3 Cells, Neoplasms metabolism, Proto-Oncogene Proteins c-cbl chemistry, Proto-Oncogene Proteins c-cbl metabolism, RING Finger Domains genetics, Receptor Protein-Tyrosine Kinases metabolism, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Sequence Deletion, Signal Transduction, Loss of Function Mutation, Neoplasms genetics, Proto-Oncogene Proteins c-cbl genetics
- Abstract
Receptor Tyrosine Kinase (RTK) signaling is essential for normal biological processes and disruption of this regulation can lead to tumor initiation and progression. Cbl proteins (Cbl, Cbl-b and Cbl-c) are a family of RING finger (RF) ubiquitin ligases that negatively regulate a variety of RTKs, including EGFR, MET, and RET. Recent studies have identified Cbl mutations associated with human myeloid neoplasias in approximately 5% of the cases. Cbl-c is the most recently identified human Cbl protein and is expressed exclusively in epithelial cells. We identified a novel cDNA that was isolated from a mouse mammary cancer from the C3(1) Large T Antigen transgenic model. This mutant cDNA encodes a protein that has a deletion in the RF domain of Cbl-c, thereby resembling known Cbl family mutations associated with myeoloid neoplasias. Genomic analysis of both parental and transgenic lines shows no evidence of germline mutation indicating that this mutation is likely a somatic mutation. The mutant protein enhances transformation of NIH 3T3 cells when expressed in combination with SV40 Large T antigen. Together these data are consistent with a second hit mutation. In overexpression studies, this mutant Cbl-c protein fails to mediate ubiquitination of activated EGFR and acts in a dominant negative fashion to prevent ubiquitination and downregulation of the activated EGFR by wild type Cbl proteins. Mechanistically, the mutant Cbl-c binds to the EGFR and prevents recruitment of the wild type Cbl protein. Furthermore, data mining reveals Cbl-c mutations associated with solid tumors in humans. Subsequent cell-based analysis demonstrates a similar loss of E3 function and dominant negative effects for one of these human mutations. These data suggest that like Cbl mutations in myeloid neoplasms, loss of Cbl-c function may contribute to the pathogenesis of solid tumors in murine models and in humans., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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34. Evolution of Ovipositor Length in Drosophila suzukii Is Driven by Enhanced Cell Size Expansion and Anisotropic Tissue Reorganization.
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Green JE, Cavey M, Médina Caturegli E, Aigouy B, Gompel N, and Prud'homme B
- Subjects
- Animals, Drosophila physiology, Female, Biological Evolution, Cell Enlargement, Drosophila anatomy & histology, Oviposition
- Abstract
Morphological diversity is dominated by variation in body proportion [1], which can be described with scaling relationships and mathematical equations, following the pioneering work of D'Arcy Thompson [2] and Julian Huxley [3]. Yet, the cellular processes underlying divergence in size and shape of morphological traits between species remain largely unknown [4-8]. Here, we compare the ovipositors of two related species, Drosophila melanogaster and D. suzukii. D. suzukii has switched its egg-laying niche from rotting to ripe fruit [9]. Along with this shift, the D. suzukii ovipositor has undergone a significant change in size and shape [10]. Using an allometric approach, we find that, while adult ovipositor width has hardly changed between the species, D. suzukii ovipositor length is almost double that of D. melanogaster. We show that this difference mostly arises in a 6-h time window during pupal development. We observe that the developing ovipositors of the two species comprise an almost identical number of cells, with a similar profile of cell shapes and orientations. After cell division stops, we find that the ovipositor area continues to grow in both species through the isotropic expansion of cell apical area and the anisotropic cellular reorganization of the tissue. Remarkably, we find that the lengthening of the D. suzukii ovipositor compared to that of D. melanogaster results from the combination of the accelerated expansion of apical cell size and the enhanced anisotropic rearrangement of cells in the tissue. Therefore, the quantitative fine-tuning of morphogenetic processes can drive evolutionary changes in organ size and shape., (Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2019
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35. Muscadine grape skin extract inhibits prostate cancer cells by inducing cell-cycle arrest, and decreasing migration through heat shock protein 40.
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Ignacio DN, Mason KD, Hackett-Morton EC, Albanese C, Ringer L, Wagner WD, Wang PC, Carducci MA, Kachhap SK, Paller CJ, Mendonca J, Li-Ying Chan L, Lin B, Hartle DK, Green JE, Brown CA, and Hudson TS
- Abstract
Previously we demonstrated that muscadine grape skin extract (MSKE), a natural product, significantly inhibited androgen-responsive prostate cancer cell growth by inducing apoptosis through the targeting of survival pathways. However, the therapeutic effect of MSKE on more aggressive androgen-independent prostate cancer remains unknown. This study examined the effects of MSKE treatment in metastatic prostate cancer using complementary PC-3 cells and xenograft model. MSKE significantly inhibited PC-3 human prostate cancer cell tumor growth in vitro and in vivo . The growth-inhibitory effect of MSKE appeared to be through the induction of cell-cycle arrest. This induction was accompanied by a reduction in the protein expression of Hsp40 and cell-cycle regulation proteins, cyclin D1 and NF-kBp65. In addition, MSKE induced p21 expression independent of wild-type p53 induced protein expression. Moreover, we demonstrate that MSKE significantly inhibited cell migration in PC-3 prostate cancer cells. Overall, these results demonstrate that MSKE inhibits prostate tumor growth and migration, and induces cell-cycle arrest by targeting Hsp40 and proteins involved in cell-cycle regulation and proliferation. This suggests that MSKE may also be explored either as a neo-adjuvant or therapeutic for castration resistant prostate cancer.
- Published
- 2019
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36. Ultraviolet Radiation Inhibits Mammary Carcinogenesis in an ER-Negative Murine Model by a Mechanism Independent of Vitamin D 3 .
- Author
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Makarova AM, Frascari F, Davari P, Gorouhi F, Dutt P, Wang L, Dhawan A, Wang G, Green JE, and Epstein EH Jr
- Subjects
- Animals, Carcinoma, Intraductal, Noninfiltrating pathology, Cell Line, Tumor transplantation, Cholecalciferol metabolism, Disease Models, Animal, Female, Humans, Mammary Neoplasms, Experimental genetics, Mammary Neoplasms, Experimental pathology, Mice, Mice, Transgenic, Skin metabolism, Skin radiation effects, Carcinogenesis radiation effects, Carcinoma, Intraductal, Noninfiltrating prevention & control, Mammary Neoplasms, Experimental prevention & control, Receptors, Estrogen metabolism, Ultraviolet Rays
- Abstract
Three decades ago, the Garlands postulated that vitamin D
3 produced in the skin by ultraviolet radiation (UVR)-induced conversion of 7-dehydrocholesterol to pre-D3 has anticancer effects, thus triggering more than 9,500 publications on D3 and cancer. Here, we report that UVR treatment of transgenic mice of the well-established C3(1)/SV40 Tag mammary cancer model significantly inhibits both autochthonous carcinogenesis and allograft tumor growth, but in contrast neither dietary nor topical D3 influences mammary carcinogenesis in this specific mouse model. Furthermore, UVR's inhibitory effects occur irrespective of whether or not the treatment increases circulating D3 in the mice. The inhibitory effect of UVR on autochthonous tumors occurs at or before the stage of ductal carcinoma in situ. Our studies indicate clearly that UVR can exert D3 -independent anticancer effects in C3(1)/SV40 Tag mice. Therefore, supplemental D3 may not mimic all possible beneficial effects of UVR, and uncovering non-D3 -mediated mechanisms of UVR tumor inhibition may lead to novel strategies for cancer prevention. Cancer Prev Res; 11(7); 383-92. ©2018 AACR ., (©2018 American Association for Cancer Research.)- Published
- 2018
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37. Autophagy promotes the survival of dormant breast cancer cells and metastatic tumour recurrence.
- Author
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Vera-Ramirez L, Vodnala SK, Nini R, Hunter KW, and Green JE
- Subjects
- Adenine analogs & derivatives, Adenine pharmacology, Animals, Autophagy drug effects, Autophagy-Related Protein 7 antagonists & inhibitors, Autophagy-Related Protein 7 metabolism, Beclin-1 antagonists & inhibitors, Beclin-1 genetics, Beclin-1 metabolism, Breast Neoplasms metabolism, Breast Neoplasms pathology, Caspases genetics, Caspases metabolism, Cell Line, Tumor, Cell Proliferation drug effects, Cell Survival drug effects, Collagen Type I pharmacology, Female, Humans, Hydroxychloroquine pharmacology, Lymphatic Metastasis, Mammary Neoplasms, Animal drug therapy, Mammary Neoplasms, Animal metabolism, Mammary Neoplasms, Animal pathology, Mice, Mice, Nude, Mitochondria drug effects, Mitochondria metabolism, Mitochondria pathology, RNA, Small Interfering genetics, RNA, Small Interfering metabolism, Reactive Oxygen Species agonists, Reactive Oxygen Species metabolism, Recurrence, Signal Transduction, Autophagy genetics, Autophagy-Related Protein 7 genetics, Breast Neoplasms genetics, Gene Expression Regulation, Neoplastic, Mammary Neoplasms, Animal genetics
- Abstract
Cancer recurrence after initial diagnosis and treatment is a major cause of breast cancer (BC) mortality, which results from the metastatic outbreak of dormant tumour cells. Alterations in the tumour microenvironment can trigger signalling pathways in dormant cells leading to their proliferation. However, processes involved in the initial and the long-term survival of disseminated dormant BC cells remain largely unknown. Here we show that autophagy is a critical mechanism for the survival of disseminated dormant BC cells. Pharmacologic or genetic inhibition of autophagy in dormant BC cells results in significantly decreased cell survival and metastatic burden in mouse and human 3D in vitro and in vivo preclinical models of dormancy. In vivo experiments identify autophagy gene autophagy-related 7 (ATG7) to be essential for autophagy activation. Mechanistically, inhibition of the autophagic flux in dormant BC cells leads to the accumulation of damaged mitochondria and reactive oxygen species (ROS), resulting in cell apoptosis.
- Published
- 2018
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38. Mechanism for initiation of food allergy: Dependence on skin barrier mutations and environmental allergen costimulation.
- Author
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Walker MT, Green JE, Ferrie RP, Queener AM, Kaplan MH, and Cook-Mills JM
- Subjects
- Allergens immunology, Anaphylaxis genetics, Anaphylaxis immunology, Animals, Antigens immunology, Female, Filaggrin Proteins, Food Hypersensitivity genetics, Immunoglobulin E immunology, Inflammation genetics, Inflammation immunology, Inflammation Mediators immunology, Intermediate Filament Proteins genetics, Intermediate Filament Proteins immunology, Male, Mice, Mice, Inbred C57BL, Mutation genetics, Food Hypersensitivity immunology, Mutation immunology, Skin immunology
- Abstract
Background: Mechanisms for the development of food allergy in neonates are unknown but clearly linked in patient populations to a genetic predisposition to skin barrier defects. Whether skin barrier defects contribute functionally to development of food allergy is unknown., Objective: The purpose of the study was to determine whether skin barrier mutations, which are primarily heterozygous in patient populations, contribute to the development of food allergy., Methods: Mice heterozygous for the filaggrin (Flg)
ft and Tmem79ma mutations were skin sensitized with environmental and food allergens. After sensitization, mice received oral challenge with food allergen, and then inflammation, inflammatory mediators, and anaphylaxis were measured., Results: We define development of inflammation, inflammatory mediators, and food allergen-induced anaphylaxis in neonatal mice with skin barrier mutations after brief concurrent cutaneous exposure to food and environmental allergens. Moreover, neonates of allergic mothers have increased responses to suboptimal sensitization with food allergens. Importantly, responses to food allergens by these neonatal mice were dependent on genetic defects in skin barrier function and on exposure to environmental allergens. ST2 blockade during skin sensitization inhibited the development of anaphylaxis, antigen-specific IgE, and inflammatory mediators. Neonatal anaphylactic responses and antigen-specific IgE were also inhibited by oral pre-exposure to food allergen, but interestingly, this was blunted by concurrent pre-exposure of the skin to environmental allergen., Conclusion: These studies uncover mechanisms for food allergy sensitization and anaphylaxis in neonatal mice that are consistent with features of human early-life exposures and genetics in patients with clinical food allergy and demonstrate that changes in barrier function drive development of anaphylaxis to food allergen., (Copyright © 2018 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.)- Published
- 2018
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39. Immunocompetent mouse allograft models for development of therapies to target breast cancer metastasis.
- Author
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Yang Y, Yang HH, Hu Y, Watson PH, Liu H, Geiger TR, Anver MR, Haines DC, Martin P, Green JE, Lee MP, Hunter KW, and Wakefield LM
- Subjects
- Allografts, Animals, Biomarkers, Tumor, Biopsy, Breast Neoplasms drug therapy, Breast Neoplasms metabolism, Cell Line, Tumor, Female, Gene Expression Profiling, Genomics methods, Heterografts, Humans, Immunohistochemistry, Mice, Molecular Targeted Therapy, Neoplasm Metastasis, Polymorphism, Single Nucleotide, Breast Neoplasms immunology, Breast Neoplasms pathology, Mammary Neoplasms, Experimental
- Abstract
Effective drug development to combat metastatic disease in breast cancer would be aided by the availability of well-characterized preclinical animal models that (a) metastasize with high efficiency, (b) metastasize in a reasonable time-frame, (c) have an intact immune system, and (d) capture some of the heterogeneity of the human disease. To address these issues, we have assembled a panel of twelve mouse mammary cancer cell lines that can metastasize efficiently on implantation into syngeneic immunocompetent hosts. Genomic characterization shows that more than half of the 30 most commonly mutated genes in human breast cancer are represented within the panel. Transcriptomically, most of the models fall into the luminal A or B intrinsic molecular subtypes, despite the predominance of an aggressive, poorly-differentiated or spindled histopathology in all models. Patterns of immune cell infiltration, proliferation rates, apoptosis and angiogenesis differed significantly among models. Inherent within-model variability of the metastatic phenotype mandates large cohort sizes for intervention studies but may also capture some relevant non-genetic sources of variability. The varied molecular and phenotypic characteristics of this expanded panel of models should aid in model selection for development of antimetastatic therapies in vivo, and serve as a useful platform for predictive biomarker identification.
- Published
- 2017
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40. 'Normalizing' the malignant phenotype of luminal breast cancer cells via alpha(v)beta(3)-integrin.
- Author
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Abu-Tayeh H, Weidenfeld K, Zhilin-Roth A, Schif-Zuck S, Thaler S, Cotarelo C, Tan TZ, Thiery JP, Green JE, Klorin G, Sabo E, Sleeman JP, Tzukerman M, and Barkan D
- Subjects
- Acinar Cells metabolism, Acinar Cells pathology, Basement Membrane metabolism, Cell Differentiation, Cell Line, Tumor, Cell Proliferation, Down-Regulation, Embryonic Stem Cells metabolism, Female, Gene Knockdown Techniques, Humans, Hyperplasia, MCF-7 Cells, Neoplastic Stem Cells metabolism, Neoplastic Stem Cells pathology, Organoids metabolism, Organoids pathology, Phenotype, Proto-Oncogene Proteins metabolism, Receptor, Notch4, Receptors, Notch metabolism, Signal Transduction, Spheroids, Cellular metabolism, Spheroids, Cellular pathology, Teratoma pathology, Breast Neoplasms pathology, Integrin alphaVbeta3 metabolism
- Abstract
Reestablishing tissue organization of breast cancer cells into acini was previously shown to override their malignant phenotype. In our study, we demonstrate that alpha(v)beta(3) integrin (Int-αvβ3), previously shown to play a role in cancer progression, promoted differentiation and growth arrest of organoids derived from luminal A breast cancer cells grown in their relevant three-dimensional microenvironment. These organoids differentiated into normal-like acini resembling a benign stage of breast tissue. Likewise, we demonstrate that Int-αvβ3 is selectively expressed in the epithelium of the benign stage of breast tissues, and is lost during the early stages of luminal A breast cancer progression. Notably, the organoids' reversion into normal-like acini was mediated by cancer luminal progenitor-like cells expressing both EpCAM
high CD49flow CD24+ and Int-αvβ3. Furthermore, downregulation of Notch4 expression and downstream signaling was shown to mediate Int-αvβ3-induced reversion. Intriguingly, when luminal A breast cancer cells expressing Int-αvβ3 were injected into a humanized mouse model, differentiated tumors developed when compared with that generated by control cells. Hence, our data suggest that promoting differentiation of luminal A breast cancer cells by signaling emanating from Int-αvβ3 can potentially promote 'normalization' of their malignant phenotype and may prevent the malignant cells from progressing.- Published
- 2016
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41. Identifying the necrotic zone boundary in tumour spheroids with pair-correlation functions.
- Author
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Dini S, Binder BJ, Fischer SC, Mattheyer C, Schmitz A, Stelzer EH, Bean NG, and Green JE
- Subjects
- Cell Line, Tumor, Humans, Necrosis, Neoplasms pathology, Spheroids, Cellular pathology, Computer Simulation, Models, Biological, Neoplasms metabolism, Spheroids, Cellular metabolism
- Abstract
Automatic identification of the necrotic zone boundary is important in the assessment of treatments on in vitro tumour spheroids. This has been difficult especially when the difference in cell density between the necrotic and viable zones of a tumour spheroid is small. To help overcome this problem, we developed novel one-dimensional pair-correlation functions (PCFs) to provide quantitative estimates of the radial distance of the necrotic zone boundary from the centre of a tumour spheroid. We validate our approach on synthetic tumour spheroids in which the position of the necrotic zone boundary is known a priori It is then applied to nine real tumour spheroids imaged with light sheet-based fluorescence microscopy. PCF estimates of the necrotic zone boundary are compared with those of a human expert and an existing standard computational method., (© 2016 The Author(s).)
- Published
- 2016
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42. A structure-function analysis of the left ventricle.
- Author
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Snelling EP, Seymour RS, Green JE, Meyer LC, Fuller A, Haw A, Mitchell D, Farrell AP, Costello MA, Izwan A, Badenhorst M, and Maloney SK
- Subjects
- Animals, Blood Pressure physiology, Computer Simulation, Female, Goats, Male, Models, Anatomic, Organ Size physiology, Oxygen metabolism, Sheep, Cardiac Output physiology, Heart Ventricles anatomy & histology, Mitochondria, Heart physiology, Models, Cardiovascular, Oxygen Consumption physiology, Ventricular Function, Left physiology
- Abstract
This study presents a structure-function analysis of the mammalian left ventricle and examines the performance of the cardiac capillary network, mitochondria, and myofibrils at rest and during simulated heavy exercise. Left ventricular external mechanical work rate was calculated from cardiac output and systemic mean arterial blood pressure in resting sheep (Ovis aries; n = 4) and goats (Capra hircus; n = 4) under mild sedation, followed by perfusion-fixation of the left ventricle and quantification of the cardiac capillary-tissue geometry and cardiomyocyte ultrastructure. The investigation was then extended to heavy exercise by increasing cardiac work according to published hemodynamics of sheep and goats performing sustained treadmill exercise. Left ventricular work rate averaged 0.017 W/cm
3 of tissue at rest and was estimated to increase to ∼0.060 W/cm3 during heavy exercise. According to an oxygen transport model we applied to the left ventricular tissue, we predicted that oxygen consumption increases from 195 nmol O2 ·s-1 ·cm-3 of tissue at rest to ∼600 nmol O2 ·s-1 ·cm-3 during heavy exercise, which is within 90% of the oxygen demand rate and consistent with work remaining predominantly aerobic. Mitochondria represent 21-22% of cardiomyocyte volume and consume oxygen at a rate of 1,150 nmol O2 ·s-1 ·cm-3 of mitochondria at rest and ∼3,600 nmol O2 ·s-1 ·cm-3 during heavy exercise, which is within 80% of maximum in vitro rates and consistent with mitochondria operating near their functional limits. Myofibrils represent 65-66% of cardiomyocyte volume, and according to a Laplacian model of the left ventricular chamber, generate peak fiber tensions in the range of 50 to 70 kPa at rest and during heavy exercise, which is less than maximum tension of isolated cardiac tissue (120-140 kPa) and is explained by an apparent reserve capacity for tension development built into the left ventricle., (Copyright © 2016 the American Physiological Society.)- Published
- 2016
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43. Cross-validation of survival associated biomarkers in gastric cancer using transcriptomic data of 1,065 patients.
- Author
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Szász AM, Lánczky A, Nagy Á, Förster S, Hark K, Green JE, Boussioutas A, Busuttil R, Szabó A, and Győrffy B
- Subjects
- Caspase 3 metabolism, Female, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Humans, Inhibitor of Apoptosis Proteins metabolism, Male, Matrix Metalloproteinase 2 metabolism, Oligonucleotide Array Sequence Analysis, Proportional Hazards Models, Sirtuin 1 metabolism, Survivin, Tissue Inhibitor of Metalloproteinase-1 metabolism, Treatment Outcome, Vascular Endothelial Growth Factor A metabolism, beta Catenin metabolism, Biomarkers, Tumor metabolism, Stomach Neoplasms metabolism, Transcriptome
- Abstract
Introduction: Multiple gene expression based prognostic biomarkers have been repeatedly identified in gastric carcinoma. However, without confirmation in an independent validation study, their clinical utility is limited. Our goal was to establish a robust database enabling the swift validation of previous and future gastric cancer survival biomarker candidates., Results: The entire database incorporates 1,065 gastric carcinoma samples, gene expression data. Out of 29 established markers, higher expression of BECN1 (HR = 0.68, p = 1.5E-05), CASP3 (HR = 0.5, p = 6E-14), COX2 (HR = 0.72, p = 0.0013), CTGF (HR = 0.72, p = 0.00051), CTNNB1 (HR = 0.47, p = 4.3E-15), MET (HR = 0.63, p = 1.3E-05), and SIRT1 (HR = 0.64, p = 2.2E-07) correlated to longer OS. Higher expression of BIRC5 (HR = 1.45, p = 1E-04), CNTN1 (HR = 1.44, p = 3.5E- 05), EGFR (HR = 1.86, p = 8.5E-11), ERCC1 (HR = 1.36, p = 0.0012), HER2 (HR = 1.41, p = 0.00011), MMP2 (HR = 1.78, p = 2.6E-09), PFKB4 (HR = 1.56, p = 3.2E-07), SPHK1 (HR = 1.61, p = 3.1E-06), SP1 (HR = 1.45, p = 1.6E-05), TIMP1 (HR = 1.92, p = 2.2E- 10) and VEGF (HR = 1.53, p = 5.7E-06) were predictive for poor OS., Materials and Methods: We integrated samples of three major cancer research centers (Berlin, Bethesda and Melbourne datasets) and publicly available datasets with available follow-up data to form a single integrated database. Subsequently, we performed a literature search for prognostic markers in gastric carcinomas (PubMed, 2012-2015) and re-validated their findings predicting first progression (FP) and overall survival (OS) using uni- and multivariate Cox proportional hazards regression analysis., Conclusions: The major advantage of our analysis is that we evaluated all genes in the same set of patients thereby making direct comparison of the markers feasible. The best performing genes include BIRC5, CASP3, CTNNB1, TIMP-1, MMP-2, SIRT, and VEGF., Competing Interests: The authors declare no conflicts of interest.
- Published
- 2016
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44. An investigation of the influence of extracellular matrix anisotropy and cell-matrix interactions on tissue architecture.
- Author
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Dyson RJ, Green JE, Whiteley JP, and Byrne HM
- Subjects
- Anisotropy, Cells cytology, Collagen metabolism, Cells metabolism, Extracellular Matrix metabolism, Models, Biological
- Abstract
Mechanical interactions between cells and the fibrous extracellular matrix (ECM) in which they reside play a key role in tissue development. Mechanical cues from the environment (such as stress, strain and fibre orientation) regulate a range of cell behaviours, including proliferation, differentiation and motility. In turn, the ECM structure is affected by cells exerting forces on the matrix which result in deformation and fibre realignment. In this paper we develop a mathematical model to investigate this mechanical feedback between cells and the ECM. We consider a three-phase mixture of collagen, culture medium and cells, and formulate a system of partial differential equations which represents conservation of mass and momentum for each phase. This modelling framework takes into account the anisotropic mechanical properties of the collagen gel arising from its fibrous microstructure. We also propose a cell-collagen interaction force which depends upon fibre orientation and collagen density. We use a combination of numerical and analytical techniques to study the influence of cell-ECM interactions on pattern formation in tissues. Our results illustrate the wide range of structures which may be formed, and how those that emerge depend upon the importance of cell-ECM interactions.
- Published
- 2016
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45. Birinapant (TL32711) Improves Responses to GEM/AZD7762 Combination Therapy in Triple-negative Breast Cancer Cell Lines.
- Author
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Min DJ, He S, and Green JE
- Subjects
- Apoptosis drug effects, Cell Line, Tumor, Checkpoint Kinase 1 metabolism, DNA Repair, Deoxycytidine administration & dosage, Female, Humans, Phosphorylation, Triple Negative Breast Neoplasms pathology, Urea administration & dosage, Gemcitabine, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Deoxycytidine analogs & derivatives, Dipeptides administration & dosage, Indoles administration & dosage, Thiophenes administration & dosage, Triple Negative Breast Neoplasms drug therapy, Urea analogs & derivatives
- Abstract
Background: Triple-negative breast cancer (TNBC) is an aggressive form of breast cancer currently lacking targeted therapies. Our previous work demonstrated a therapeutic synergism with gemcitabine (GEM) and the CHK1 inhibitor (AZD7762) combination treatment in a TNBC cell line. We hypothesized that the response to this combination therapy would differ among heterogeneous TNBC patients and that addition of a SMAC mimetic (TL32711) could improve efficacy., Materials and Methods: Therapeutic responses to GEM, GEM/AZD7762, and GEM/AZD7762/TL32711 combinations were investigated by XTT assays and western blotting of cell cycle and apoptosis-related proteins in ten TNBC cell lines., Results: TNBC cell lines harboring low levels of endogenous CHK1, cIAP1 and cIAP2 were responsive to GEM alone, whereas cell lines demonstrating a minimal increase in phospho-S345 CHK1 after treatment were responsive to GEM/AZD7762 or GEM/AZD7762/TL32711 combination., Conclusion: The response of TNBC cells to particular therapies varies and will require development of predictive biomarkers., (Copyright© 2016 International Institute of Anticancer Research (Dr. John G. Delinassios), All rights reserved.)
- Published
- 2016
46. Development and Preclinical Application of an Immunocompetent Transplant Model of Basal Breast Cancer with Lung, Liver and Brain Metastases.
- Author
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Aprelikova O, Tomlinson CC, Hoenerhoff M, Hixon JA, Durum SK, Qiu TH, He S, Burkett S, Liu ZY, Swanson SM, and Green JE
- Subjects
- Animals, Antigens, Polyomavirus Transforming metabolism, Cell Line, Tumor, Female, Gene Dosage, Humans, Lymphocytes pathology, Male, Mammary Glands, Animal pathology, Mice, Transgenic, Phenotype, Prostatic Neoplasms pathology, Spleen pathology, Transgenes, Tumor Burden, Vaccination, Brain Neoplasms secondary, Immunocompetence, Liver Neoplasms secondary, Lung Neoplasms secondary, Mammary Neoplasms, Experimental pathology, Xenograft Model Antitumor Assays
- Abstract
Triple negative breast cancer (TNBC) is an aggressive subtype of breast cancer that is associated with a poor prognosis and for which no targeted therapies currently exist. In order to improve preclinical testing for TNBC that relies primarily on using human xenografts in immunodeficient mice, we have developed a novel immunocompetent syngeneic murine tumor transplant model for basal-like triple-negative breast cancer. The C3(1)/SV40-T/t-antigen (C3(1)/Tag) mouse mammary tumor model in the FVB/N background shares important similarities with human basal-like TNBC. However, these tumors or derived cell lines are rejected when transplanted into wt FVB/N mice, likely due to the expression of SV40 T-antigen. We have developed a sub-line of mice (designated REAR mice) that carry only one copy of the C3(1)/Tag-antigen transgene resulting from a spontaneous transgene rearrangement in the original founder line. Unlike the original C3(1)/Tag mice, REAR mice do not develop mammary tumors or other phenotypes observed in the original C3(1)/Tag transgenic mice. REAR mice are more immunologically tolerant to SV40 T-antigen driven tumors and cell lines in an FVB/N background (including prostate tumors from TRAMP mice), but are otherwise immunologically intact. This transplant model system offers the ability to synchronously implant the C3(1)/Tag tumor-derived M6 cell line or individual C3(1)/Tag tumors from various stages of tumor development into the mammary fat pads or tail veins of REAR mice. C3(1)/Tag tumors or M6 cells implanted into the mammary fat pads spontaneously metastasize at a high frequency to the lung and liver. M6 cells injected by tail vein can form brain metastases. We demonstrate that irradiated M6 tumor cells or the same cells expressing GM-CSF can act as a vaccine to retard tumor growth of implanted tumor cells in the REAR model. Preclinical studies performed in animals with an intact immune system should more authentically replicate treatment responses in human patients.
- Published
- 2016
- Full Text
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47. The epigenetic modifier JMJD6 is amplified in mammary tumors and cooperates with c-Myc to enhance cellular transformation, tumor progression, and metastasis.
- Author
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Aprelikova O, Chen K, El Touny LH, Brignatz-Guittard C, Han J, Qiu T, Yang HH, Lee MP, Zhu M, and Green JE
- Subjects
- Animals, Apoptosis, Breast Neoplasms genetics, Breast Neoplasms metabolism, Cell Line, Tumor, Cell Transformation, Neoplastic metabolism, Comparative Genomic Hybridization, Female, Gene Expression Regulation, Neoplastic, Humans, Jumonji Domain-Containing Histone Demethylases metabolism, Mammary Neoplasms, Experimental genetics, Mammary Neoplasms, Experimental metabolism, Mice, Neoplasm Metastasis, Prognosis, Proto-Oncogene Proteins c-myc metabolism, Signal Transduction, Breast Neoplasms pathology, Cell Transformation, Neoplastic genetics, Epigenesis, Genetic, Jumonji Domain-Containing Histone Demethylases genetics, Mammary Neoplasms, Experimental pathology, Proto-Oncogene Proteins c-myc genetics
- Abstract
Background: Oncogene overexpression in primary cells often triggers the induction of a cellular safeguard response promoting senescence or apoptosis. Secondary cooperating genetic events are generally required for oncogene-induced tumorigenesis to overcome these biologic obstacles. We employed comparative genomic hybridization for eight genetically engineered mouse models of mammary cancer to identify loci that might harbor genes that enhance oncogene-induced tumorigenesis., Results: Unlike many other mammary tumor models, the MMTV-Myc tumors displayed few copy number variants except for amplification of distal mouse chromosome 11 in 80 % of the tumors (syntenic to human 17q23-qter often amplified in human breast cancer). Analyses of candidate genes located in this region identified JMJD6 as an epigenetic regulatory gene that cooperates with Myc to enhance tumorigenesis. It suppresses Myc-induced apoptosis under varying stress conditions through inhibition of p19ARF messenger RNA (mRNA) and protein, leading to reduced levels of p53. JMJD6 binds to the p19ARF promoter and exerts its inhibitory function through demethylation of H4R3me2a. JMJD6 overexpression in MMTV-Myc cell lines increases tumor burden, induces EMT, and greatly enhances tumor metastasis. Importantly, we demonstrate that co-expression of high levels of JMJD6 and Myc is associated with poor prognosis for human ER+ breast cancer patients., Conclusions: A novel epigenetic mechanism has been identified for how JMJD6 cooperates with Myc during oncogenic transformation. Combined high expression of Myc and JMJD6 confers a more aggressive phenotype in mouse and human tumors. Given the pleiotropic pro-tumorigenic activities of JMJD6, it may be useful as a prognostic factor and a therapeutic target for Myc-driven mammary tumorigenesis.
- Published
- 2016
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48. XX/XY System of Sex Determination in the Geophilomorph Centipede Strigamia maritima.
- Author
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Green JE, Dalíková M, Sahara K, Marec F, and Akam M
- Subjects
- Animals, Arthropods embryology, Arthropods growth & development, Arthropods physiology, Comparative Genomic Hybridization, Female, In Situ Hybridization, Fluorescence, Male, Real-Time Polymerase Chain Reaction, Arthropods genetics, Sex Determination Processes genetics, X Chromosome ultrastructure, Y Chromosome ultrastructure
- Abstract
We show that the geophilomorph centipede Strigamia maritima possesses an XX/XY system of sex chromosomes, with males being the heterogametic sex. This is, to our knowledge, the first report of sex chromosomes in any geophilomorph centipede. Using the recently assembled Strigamia genome sequence, we identified a set of scaffolds differentially represented in male and female DNA sequence. Using quantitative real-time PCR, we confirmed that three candidate X chromosome-derived scaffolds are present at approximately twice the copy number in females as in males. Furthermore, we confirmed that six candidate Y chromosome-derived scaffolds contain male-specific sequences. Finally, using this molecular information, we designed an X chromosome-specific DNA probe and performed fluorescent in situ hybridization against mitotic and meiotic chromosome spreads to identify the Strigamia XY sex-chromosome pair cytologically. We found that the X and Y chromosomes are recognizably different in size during the early pachytene stage of meiosis, and exhibit incomplete and delayed pairing.
- Published
- 2016
- Full Text
- View/download PDF
49. 2-Chloro-4-[[(1R,2R)-2-hydroxy-2-methyl-cyclopentyl]amino]-3-methyl-benzonitrile: A Transdermal Selective Androgen Receptor Modulator (SARM) for Muscle Atrophy.
- Author
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Saeed A, Vaught GM, Gavardinas K, Matthews D, Green JE, Losada PG, Bullock HA, Calvert NA, Patel NJ, Sweetana SA, Krishnan V, Henck JW, Luz JG, Wang Y, and Jadhav P
- Subjects
- Administration, Cutaneous, Anabolic Agents administration & dosage, Anabolic Agents chemical synthesis, Androgen Antagonists administration & dosage, Androgen Antagonists chemical synthesis, Aniline Compounds administration & dosage, Aniline Compounds chemical synthesis, Animals, Cholesterol, HDL metabolism, Humans, Hypercholesterolemia chemically induced, In Vitro Techniques, Liver drug effects, Liver metabolism, Macaca fascicularis, Male, Models, Molecular, Nitriles administration & dosage, Nitriles chemical synthesis, Orchiectomy, Prostatic Hyperplasia chemically induced, Rats, Skin Absorption, Structure-Activity Relationship, Anabolic Agents therapeutic use, Androgen Antagonists therapeutic use, Aniline Compounds therapeutic use, Muscular Atrophy drug therapy, Nitriles therapeutic use
- Abstract
A transdermal SARM has a potential to have therapeutic benefit through anabolic activity in muscle while sparing undesired effects of benign prostate hyperplasia (BPH) and liver-mediated decrease in HDL-C. 2-Chloro-4-[(2-hydroxy-2-methyl-cyclopentyl)amino]-3-methyl-benzonitrile 6 showed the desired muscle and prostate effects in a preclinical ORX rat model. Compound 6 had minimal effect on HDL-C levels in cynomolgus monkeys and showed human cadaver skin permeability, thus making it an effective tool for proof-of-concept studies in a clinical setting.
- Published
- 2016
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50. Establishment and characterization of metastatic gastric cancer cell lines from murine gastric adenocarcinoma lacking Smad4, p53, and E-cadherin.
- Author
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Park JW, Park DM, Choi BK, Kwon BS, Seong JK, Green JE, Kim DY, and Kim HK
- Subjects
- Animals, Cell Line, Tumor, Epithelial-Mesenchymal Transition genetics, Lung Neoplasms genetics, Mice, Mice, SCID, Neoplasm Transplantation methods, Wnt Signaling Pathway genetics, beta Catenin genetics, Adenocarcinoma genetics, Cadherins genetics, Smad4 Protein genetics, Stomach Neoplasms genetics, Tumor Suppressor Protein p53 genetics
- Abstract
There is a strong need for murine gastric cancer cell line models recapitulating human gastric cancers. Here, we describe two murine gastric cancer cell lines designated as NCC-S1 and NCC-S3. They were generated from gastric adenocarcinomas that formed in a Villin-cre, Smad4(F/F) , Trp53(F/F) , Cdh1(F/wt) mouse and a Pdx1-cre, Trp53(F/F) , Cdh1(F/F) mouse, respectively. Molecular profiles of both cell lines were very similar to human gastric cancer. NCC-S1M and NCC-S3M subpopulation clones were isolated from pulmonary metastasis of heterotopic allografts of NCC-S1 and NCC-S3 cells, respectively. NCC-S1M and NCC-S3M showed enhanced in vivo growth rates and metastatic potentials and exhibited epithelial-to-mesenchymal transition features. NCC-S1M cells developed orthotopic and heterotopic tumors in immunocompetent mice in predictable manner, and were useful for testing the efficacy of an immunotherapeutic agent, anti-4-1BB antibody. NCC-S1M and NCC-S3M cells demonstrated Wnt/β-catenin pathway activation, and knockdown of Ctnnb1 reversed the metastatic phenotype of NCC-S1M. These results underscore the role of Wnt/β-catenin pathway in metastatic phenotype of gastric cancer. Taken together, our novel metastatic gastric cancer cell lines are useful resources for drug development and metastasis research., (© 2014 Wiley Periodicals, Inc.)
- Published
- 2015
- Full Text
- View/download PDF
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