33 results on '"Gradient Calculation"'
Search Results
2. Analysis of computational schemes for calculating gradient of fluid dynamic quantities on various grids
- Author
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Kozelkov, Andrey, Struchkov, Andrey, Zhuchkov, Roman, and Strelets, Dmitry
- Published
- 2024
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3. Gradient calculation techniques for multi-point ionosphere/thermosphere measurements from GDC.
- Author
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Akbari, Hassanali, Rowland, Douglas, Coleman, Austin, Buynovskiy, Anton, Thayer, Jeffrey, Vogt, Joachim, and Dunlop, Malcolm
- Subjects
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THERMOSPHERE , *SCIENTIFIC ability , *IONOSPHERE , *ANALYTIC geometry , *UPPER atmosphere , *CLUSTER analysis (Statistics) - Abstract
The upcoming Geospace Dynamics Constellation (GDC) mission aims to investigate dynamic processes active in Earth's upper atmosphere and their local, regional, and global characteristics. Achieving this goal will involve resolving and distinguishing spatial and temporal variability of ionospheric and thermospheric (IT) structures in a quantitative manner. This, in turn, calls for the development of sophisticated algorithms that are optimal in combining information from multiple in-situ platforms. This manuscript introduces an implementation of the least-squares gradient calculation approach previously developed by J. De Keyser with the focus of its application to the GDC mission. This approach robustly calculates spatial and temporal gradients of IT parameters from in-situ measurements from multiple spacecraft that form a flexible constellation. The previous work by De Keyser, originally developed for analysis of Cluster data, focused on 3-D Cartesian geometry, while the current work extends the approach to spherical geometry suitable for missions in Low Earth Orbit (LEO). The algorithm automatically provides error bars for the estimated gradients as well as the scales over which the gradients are expected to be constant. We evaluate the performance of the software on outputs of high-resolution global ionospheric/thermospheric simulations. It is shown that the software will be a powerful tool to explore GDC's ability to answer science questions that require gradient calculations. The code can also be employed in support of Observing System Simulation Experiments to evaluate suitability of various constellation geometries and assess the impact of measurement sensitivities on addressing GDC's science objectives. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Gradient calculation techniques for multi-point ionosphere/thermosphere measurements from GDC
- Author
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Hassanali Akbari, Douglas Rowland, Austin Coleman, Anton Buynovskiy, and Jeffrey Thayer
- Subjects
multi-point in-situ measurements ,satellite constellation ,Geospace Dynamics Constellation (GDC) ,ionospheric dynamics ,gradient calculation ,Astronomy ,QB1-991 ,Geophysics. Cosmic physics ,QC801-809 - Abstract
The upcoming Geospace Dynamics Constellation (GDC) mission aims to investigate dynamic processes active in Earth’s upper atmosphere and their local, regional, and global characteristics. Achieving this goal will involve resolving and distinguishing spatial and temporal variability of ionospheric and thermospheric (IT) structures in a quantitative manner. This, in turn, calls for the development of sophisticated algorithms that are optimal in combining information from multiple in-situ platforms. This manuscript introduces an implementation of the least-squares gradient calculation approach previously developed by J. De Keyser with the focus of its application to the GDC mission. This approach robustly calculates spatial and temporal gradients of IT parameters from in-situ measurements from multiple spacecraft that form a flexible constellation. The previous work by De Keyser, originally developed for analysis of Cluster data, focused on 3-D Cartesian geometry, while the current work extends the approach to spherical geometry suitable for missions in Low Earth Orbit (LEO). The algorithm automatically provides error bars for the estimated gradients as well as the scales over which the gradients are expected to be constant. We evaluate the performance of the software on outputs of high-resolution global ionospheric/thermospheric simulations. It is shown that the software will be a powerful tool to explore GDC’s ability to answer science questions that require gradient calculations. The code can also be employed in support of Observing System Simulation Experiments to evaluate suitability of various constellation geometries and assess the impact of measurement sensitivities on addressing GDC’s science objectives.
- Published
- 2024
- Full Text
- View/download PDF
5. A unification of least-squares and Green–Gauss gradients under a common projection-based gradient reconstruction framework.
- Author
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Syrakos, Alexandros, Oxtoby, Oliver, de Villiers, Eugene, Varchanis, Stylianos, Dimakopoulos, Yannis, and Tsamopoulos, John
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ORTHOGRAPHIC projection , *ORTHOGONAL systems , *LEAST squares , *STATISTICAL weighting , *DIVERGENCE theorem - Abstract
We propose a family of gradient reconstruction schemes based on the solution of over-determined systems by orthogonal or oblique projections. In the case of orthogonal projections, we retrieve familiar weighted least-squares gradients, but we also propose new direction-weighted variants. On the other hand, using oblique projections that employ cell face normal vectors we derive variations of consistent Green–Gauss gradients, which we call Taylor–Gauss gradients. The gradients are tested and compared on a variety of grids such as structured, locally refined, randomly perturbed, unstructured, and with high aspect ratio. The tests include quadrilateral and triangular grids, and employ both compact and extended stencils, and observations are made about the best choice of gradient and weighting scheme for each case. On high aspect ratio grids, it is found that most gradients can exhibit a kind of numerical instability that may be so severe as to make the gradient unusable. A theoretical analysis of the instability reveals that it is triggered by roundoff errors in the calculation of the cell centroids, but ultimately is due to truncation errors of the gradient reconstruction scheme, rather than roundoff errors. Based on this analysis, we provide guidelines on the range of weights that can be used safely with least squares methods to avoid this instability. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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6. Memory-Efficient Backpropagation for Recurrent Neural Networks
- Author
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Ayoub, Issa, Al Osman, Hussein, Hutchison, David, Editorial Board Member, Kanade, Takeo, Editorial Board Member, Kittler, Josef, Editorial Board Member, Kleinberg, Jon M., Editorial Board Member, Mattern, Friedemann, Editorial Board Member, Mitchell, John C., Editorial Board Member, Naor, Moni, Editorial Board Member, Pandu Rangan, C., Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Terzopoulos, Demetri, Editorial Board Member, Tygar, Doug, Editorial Board Member, Goos, Gerhard, Founding Editor, Hartmanis, Juris, Founding Editor, Meurs, Marie-Jean, editor, and Rudzicz, Frank, editor
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- 2019
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7. Programming new geometry restraints: Parallelity of atomic groups
- Author
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Urzhumtsev, Alexandre [Centre for Integrative Biology, IGBMC, Illkirch (France); Universite de Lorraine, Nancy (France). Dept. de Physique.]
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- 2015
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8. Programming new geometry restraints: parallelity of atomic groups.
- Author
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Sobolev, Oleg V, Afonine, Pavel V, Adams, Paul D, and Urzhumtsev, Alexandre
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PHENIX ,atomic model refinement ,cctbx ,gradient calculation ,parallel planes ,restraints ,Inorganic & Nuclear Chemistry ,Mathematical Sciences ,Physical Sciences ,Engineering - Abstract
Improvements in structural biology methods, in particular crystallography and cryo-electron microscopy, have created an increased demand for the refinement of atomic models against low-resolution experimental data. One way to compensate for the lack of high-resolution experimental data is to use a priori information about model geometry that can be utilized in refinement in the form of stereochemical restraints or constraints. Here, the definition and calculation of the restraints that can be imposed on planar atomic groups, in particular the angle between such groups, are described. Detailed derivations of the restraint targets and their gradients are provided so that they can be readily implemented in other contexts. Practical implementations of the restraints, and of associated data structures, in the Computational Crystallography Toolbox (cctbx) are presented.
- Published
- 2015
9. Kriging与改进一次二阶矩融合的可靠性分析方法.
- Author
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袁修开, 孔冲冲, and 顾健
- Abstract
Copyright of Journal of National University of Defense Technology / Guofang Keji Daxue Xuebao is the property of NUDT Press and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2020
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10. Rapid facial expression recognition under part occlusion based on symmetric SURF and heterogeneous soft partition network.
- Author
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Hu, Ke, Huang, Guoheng, Yang, Ying, Pun, Chi-Man, Ling, Wing-Kuen, and Cheng, Lianglun
- Subjects
FACIAL expression ,OCEAN waves ,DEEP learning ,HUMAN facial recognition software - Abstract
Recently, deep learning has made great achievements in facial expression recognition. However, occlusion and large skew will greatly affect the accuracy of facial expression recognition in practice. Therefore, we propose a novel framework based on symmetric SURF and heterogeneous soft partition network to quickly recognize facial recognition under partial occlusion. In this framework, an occlusion detection module based on symmetric SURF is presented to detect the occlusion part, which helps to locate the horizontal symmetric area of the occlusion area. After that, a face inpainting module based on mirror transition is presented to rapidly accomplish the face inpainting under the unsupervised circumstance. Moreover, a recognition network based on heterogeneous soft partitioning is proposed for the facial expression recognition. After heterogeneous soft partitioning, the weights of each part are input and to into the recognition network as more prior information for training. Finally, we feed the weighted image into the trained neural network for expression recognition. Experimental results show that the accuracy of the proposed method is respectively 7% and 8% higher than the average accuracies from the state-of-the-art methods on Cohn-Kanade (CK +) and fer2013 datasets. Besides, the run time of our method is 2.38 s faster than the most advanced. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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11. Hog Feature Points Detection and Feature Extraction of Microbes under Microscope.
- Author
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Zhanshen Feng and Yongjie Zhu
- Subjects
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INFORMATION technology , *MICROBIAL detectors , *IMAGE processing , *HISTOGRAMS , *COMPUTER vision - Abstract
Due to the complicated procedures, lack of standardized procedures, error-pronemanual operation andvisual interpretation of traditional microscopic microbiological detection methods, it is difficult to trace the results of microscopic detection, and thus the detection efficiency is low, so the development of microbial detection has encountered a bottleneck. In this era of information technology, it is an urgent problem to be solved on how to combine image processing technology with microbial detection to manage microbial samples more efficiently. The Histogram of Oriented Gradient (HOG) feature is a feature descriptor used for object detection in computer vision and image processing, which constructs the feature by calculating and counting the histogram of gradient direction of local area. In this paper, a method of microbial feature extraction based on Hog feature extraction is proposed, which adopts the color space normalization, gradient calculation, histogram of oriented gradient, normalization and feature extraction of overlapping blockshistogram. The experiment verifies that such method in this paper can be better used to identify and extract the effective feature points of the microbe image under the microscope, which provides a good foundation for the subsequent further processing of relevant professionals. [ABSTRACT FROM AUTHOR]
- Published
- 2020
12. 影像三维重建的网格自适应快速优化.
- Author
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张春森, 张梦辉, 郭丙轩, and 彭哲
- Subjects
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IMAGE reconstruction , *DRONE aircraft , *COMPUTER vision , *TRIANGLES , *PROBLEM solving , *REMOTELY piloted vehicles , *RADARSAT satellites - Abstract
A method of balancing the optimize accuracy and efficiency of the mesh to achieve mesh adaptive fast optimization is proposed to solve the problem of low efficiency of mesh optimization in the existing 3D reconstruction based on images. After calculating the initial value of the vertex gradient along the triangular normal vector based on the image gray information, the mesh of each triangle is marked differently according to the different results: The active triangles and the lazy triangles, through the active in the mesh is refined to abandon the optimization of the lazy triangles in exchanging for improvement of efficiency. The optimization of the efficiency is fast improving while obtaining better mesh vertices. We choose classical images church and fountain data in the 3D reconstruction experiment of computer vision and the widely used of unmanned aerial vehicle (UAV) images in photogrammetry to reconstruct mesh to refine. The mesh model optimization time and precision comparison results show that this algorithm can greatly improve the mesh optimize efficiency to obtain the 3D model faster. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
13. An Improved Image Quality Assessment in Gradient Domain
- Author
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Ren, Yuling, Lu, Wen, He, Lihuo, Xu, Tianjiao, Diniz Junqueira Barbosa, Simone, Series editor, Chen, Phoebe, Series editor, Filipe, Joaquim, Series editor, Kotenko, Igor, Series editor, Sivalingam, Krishna M., Series editor, Washio, Takashi, Series editor, Zha, Hongbin, editor, Chen, Xilin, editor, Wang, Liang, editor, and Miao, Qiguang, editor
- Published
- 2015
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14. Guidance on the Selection of Central Difference Method Accuracy in Volume Rendering
- Author
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Nagai, Kazuhiro, Rosen, Paul, Hutchison, David, Series editor, Kanade, Takeo, Series editor, Kittler, Josef, Series editor, Kleinberg, Jon M., Series editor, Mattern, Friedemann, Series editor, Mitchell, John C., Series editor, Naor, Moni, Series editor, Pandu Rangan, C., Series editor, Steffen, Bernhard, Series editor, Terzopoulos, Demetri, Series editor, Tygar, Doug, Series editor, Weikum, Gerhard, Series editor, Bebis, George, editor, Boyle, Richard, editor, Parvin, Bahram, editor, Koracin, Darko, editor, Pavlidis, Ioannis, editor, Feris, Rogerio, editor, McGraw, Tim, editor, Elendt, Mark, editor, Kopper, Regis, editor, Ragan, Eric, editor, Ye, Zhao, editor, and Weber, Gunther, editor
- Published
- 2015
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15. Slab-Based Raycasting: Exploiting GPU Computing for Volume Visualization
- Author
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Mensmann, Jörg, Ropinski, Timo, Hinrichs, Klaus, Richard, Paul, editor, and Braz, José, editor
- Published
- 2011
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16. Gradient-based multidisciplinary design optimization of an autonomous underwater vehicle.
- Author
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Chen, Xu, Wang, Peng, Zhang, Daiyu, and Dong, Huachao
- Subjects
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AUTONOMOUS underwater vehicles , *MULTIDISCIPLINARY design optimization , *DRAG (Hydrodynamics) , *ENERGY consumption in transportation , *HYDRODYNAMICS , *PARAMETRIC modeling - Abstract
Highlights • AUV that has strong coupling relationship among disciplines is optimized. • Three kinds of software are integrated to calculate drag automatically. • The analytic methods are introduced to calculate gradients efficiently. • Optimization is performed in a multi-start approach to find the global optimum. Abstract In this paper, multidisciplinary design optimization (MDO) is introduced for the conceptual design of an autonomous underwater vehicle (AUV). The purpose is to minimize the energy consumption with predefined sailing distance. AUV is decomposed into three disciplines and the coupling relationship is analyzed to build the optimization model. Since drag plays a major role in energy consumption, a hydrodynamic analysis framework is established for drag calculation, consisting of parametric modeling, mesh auto-generation and numerical simulation. In order to complete the optimization effectively, multidisciplinary feasible (MDF) architecture is used and gradient-based optimization algorithm is adopted. Moreover, analytic methods are incorporated into the MDF architecture via gradient to further improve the efficiency of gradient calculation. The optimization result shows that the optimized AUV is much more energy-saving than the initial design and the MDF architecture via coupled analytic methods is quite efficient. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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- View/download PDF
17. Acceleration for 2D time-domain elastic full waveform inversion using a single GPU card.
- Author
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Jiang, Jinpeng and Zhu, Peimin
- Subjects
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IMAGING systems in seismology , *SEISMOLOGY instruments , *GRAPHICS processing units , *HIGH performance computing , *PROGRAMMING languages - Abstract
Full waveform inversion (FWI) is a challenging procedure due to the high computational cost related to the modeling, especially for the elastic case. The graphics processing unit (GPU) has become a popular device for the high-performance computing (HPC). To reduce the long computation time, we design and implement the GPU-based 2D elastic FWI (EFWI) in time domain using a single GPU card. We parallelize the forward modeling and gradient calculations using the CUDA programming language. To overcome the limitation of relatively small global memory on GPU, the boundary saving strategy is exploited to reconstruct the forward wavefield. Moreover, the L-BFGS optimization method used in the inversion increases the convergence of the misfit function. A multiscale inversion strategy is performed in the workflow to obtain the accurate inversion results. In our tests, the GPU-based implementations using a single GPU device achieve >15 times speedup in forward modeling, and about 12 times speedup in gradient calculation, compared with the eight-core CPU implementations optimized by OpenMP. The test results from the GPU implementations are verified to have enough accuracy by comparing the results obtained from the CPU implementations. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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18. Topology optimization of members of flexible multibody systems under dominant inertia loading.
- Author
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Moghadasi, Ali, Held, Alexander, and Seifried, Robert
- Abstract
The topology optimization of members of flexible multibody systems is considered for energy-efficient lightweight design, where the gradient calculation has an essential role. In topology optimization of flexible multibody systems, where the function evaluations are very time consuming, the gradient information is necessary to accelerate the optimization process. Different approaches have been introduced and tested for the gradient calculation in the fully coupled topology optimization of flexible multibody systems. However, the computation and implementation costs of these methods are high, which limits the optimization size and the possible number of design variables. In this work, we present a modified gradient calculation based on the equivalent static load (ESL) method, which combines the time efficiency of gradient calculation of the ESL method with the higher accuracy of gradient calculation in the fully coupled methods. This modified approach, which takes into account the linear dependencies of inertial loads on acceleration, is tested on the application example of a flexible slider-crank mechanism, and the results are compared with the weakly coupled ESL method and a fully coupled optimization where gradients are calculated using the adjoint variable method. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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19. Design and Implementation of Parallel Nonrigid Image Registration Using Off-the-Shelf Supercomputers
- Author
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Ino, Fumihiko, Ooyama, Kanrou, Takeuchi, Akira, Hagihara, Kenichi, Goos, Gerhard, editor, Hartmanis, Juris, editor, van Leeuwen, Jan, editor, Ellis, Randy E., editor, and Peters, Terry M., editor
- Published
- 2003
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20. Multidisciplinary optimization design of a new underwater vehicle with highly efficient gradient calculation.
- Author
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Zhang, Daiyu, Song, Baowei, Wang, Peng, and Chen, Xu
- Subjects
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MULTIDISCIPLINARY design optimization , *SUBMERSIBLES , *OCEANOGRAPHY , *GEOMETRIC shapes , *SHIP maneuverability - Abstract
In order to reduce the cost of oceanographic exploration, a new underwater vehicle is designed to sail the required distance with the lowest energy consumed. Since the new underwater vehicle is a complicated multidisciplinary system, it is firstly decomposed into four smaller disciplines and then a multidisciplinary design optimization (MDO) problem is built based on these disciplines. The Multidisciplinary Feasible (MDF) architecture is adopted as the solution strategy to this optimization problem considering that it is easily implemented and a multidisciplinary feasible solution is always guaranteed throughout the optimization process. To solve this optimization problem efficiently, the coupled adjoint method is firstly introduced to improve the efficiency of gradient calculation and then a discipline-merging method is proposed to further enhance the computational efficiency. After this, the discipline-merging method is verified against the finite difference method in two aspects of solution accuracy and computational costs and the results show it is an effective and high efficient gradient calculation method. Finally, the multidisciplinary design optimization of the new underwater vehicle is performed efficiently under the MDF architecture with the discipline-merging method to calculate gradients. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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- View/download PDF
21. A two-level parallel strategy for rotorcraft optimization and design
- Author
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Manke, Joseph W., Wicks, Thomas M., Dadone, Leo, Hirsh, Joel E., Oh, Byung, Lengauer, Christian, editor, Griebl, Martin, editor, and Gorlatch, Sergei, editor
- Published
- 1997
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- View/download PDF
22. Computational Graph-Based Framework for Integrating Econometric Models and Machine Learning Algorithms in Emerging Data-Driven Analytical Environments
- Published
- 2021
23. DGauss: Density Functional — Gaussian Approach. Implementation and Applications
- Author
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Andzelm, J., Labanowski, Jan K., editor, and Andzelm, Jan W., editor
- Published
- 1991
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24. Automatic segmentation of T2 weighted brain MRI based on histogram gradient calculation.
- Author
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QI Xing-bin, ZHAO Li, LI Xue-mei, and TIAN Tao
- Abstract
For the issues of magnetic resonance images segmentation, this paper proposed a method based on histogram gradient calculation. Firstly, it smoothed the histogram of MR image so as to remove the lowest grayscale of three individuals. Then, it calculated the gradient on the preprocessed histogram. Finally, it segmented the image after calculating successfully number of objects and their gradients in which they lay. The proposed method was purely based on histogram processing for gradient calculation, so the computational complexity was reduced greatly. Experimental results on T2 weighted MR brain images show that the primary brain areas are extracted out efficiently from 2D and 3D images by the proposed method which has been successfully implemented on human brain MR images obtained in clinical environment. It has better segmentation efficiency than the several existing segmentation algorithms. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
25. 一种改进的植物叶片病斑区域边缘提取技术.
- Author
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夏永泉, 曾莎, and 李耀斌
- Abstract
Aiming at the defect that the traditional Canny operator edge detection easily lost the edge de-tails,an improved technology was developed to extract the edges of the leaf disease region.More complete gradient information was preserved by using Otsu to binary plant disease images and adding on two oblique directions gradient information extraction,so as to get a more complete edge image.The experimental re-sults showed that this method could effectively filter out noise in the image and detect the details of the gra-dient,remove the false edges and noise edges and get the lesion edges more accurately. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
26. Simulation of 2D Breaking Waves by Using Improved MLPG_R Method.
- Author
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Sriram, V. and Ma, Q. W.
- Abstract
The article explores improved Meshless Local Petrov Galerkin Method using Rankin source function (MLPG_R) simulation of two-dimensional breaking waves. It highlights the original formulations of the MLPG_R method and the modifications made by the authors so that it could it the requirements of their study. It explains the three different algorithms used in the MLPG_R simulation and the comparison of the results with the potential base code. The authors conclude that the algorithm they came up with could lead to a more accurate wave profile estimation.
- Published
- 2010
27. Improvements in the generalized hybrid orbital method.
- Author
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Eckard, Simon and Exner, Thomas E.
- Subjects
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DENSITY matrices , *MOLECULES , *QUANTUM theory , *MOLECULAR orbitals , *CARBON , *NITROGEN , *ELECTRONS - Abstract
In a previous paper, we described the adaptation of the generalized hybrid orbital (GHO) method for the use in fragment based quantum chemical approaches for large molecules like the field-adapted adjustable density matrix assembler (FA-ADMA). It soon became evident that the limitations of the available implementation strongly restrict its use. Therefore, in the article presented here, we describe new developments to circumvent these limitations. These include new construction algorithms of the GHO hybrid orbitals for sp3- as well as sp2-hybridized carbon and nitrogen, different distributions of electrons in the auxiliary orbitals, and the separation from the CHARMM program, which was needed to provide partial charges and bonding information. The results demonstrate an excellent improvement in accuracy of the obtained electron densities compared to capping hydrogen atoms. Additionally, the calculation of gradients opens the possibility to use FA-ADMA for geometry optimization of large molecules. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2009 [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
28. Monte Carlo Fitting Of Data From Muon Catalyzed Fusion Experiments In Solid Hydrogen
- Author
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M. Filipowicz, V.M. Bystritsky, and J. Woźniak
- Subjects
data fitting ,Monte Carlo simulation ,chi-square estimator ,gradient calculation ,diffusion simulation ,muonic atoms and molecules ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Applying the classical chi-square fitting procedure for multiparameter systems is in somecases extremely difficult due to the lack of an analytical expression for the theoretical functionsdescribing the system. This paper presents an analysis procedure for experimental datausing theoretical functions generated by Monte Carlo method, each corresponding to definitevalues of the minimization parameters. It was applied for the E742 experiment (TRIUMF,Vancouver, Canada) data analysis with the aim to analyze data from Muon Catalyzed Fusionexperiments (extraction muonic atom scattering parameters and parameters of pd fusion inpdμ molecule).
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- 2008
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29. Strategies of Gradient Evaluation for Dynamical Electron Correlation
- Author
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Pulay, Péter, Saebø, Svein, Jørgensen, Poul, editor, and Simons, Jack, editor
- Published
- 1986
- Full Text
- View/download PDF
30. Programming new geometry restraints: parallelity of atomic groups
- Author
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Alexandre Urzhumtsev, Pavel V. Afonine, Oleg V. Sobolev, and Paul D. Adams
- Subjects
Physics ,0303 health sciences ,Experimental data ,Geometry ,restraints ,PHENIX ,gradient calculation ,010403 inorganic & nuclear chemistry ,Data structure ,01 natural sciences ,Research Papers ,General Biochemistry, Genetics and Molecular Biology ,0104 chemical sciences ,03 medical and health sciences ,cctbx ,Planar ,atomic model refinement ,A priori and a posteriori ,parallel planes ,030304 developmental biology - Abstract
Details are described of the calculation of new parallelity restraints recently introduced in cctbx and PHENIX., Improvements in structural biology methods, in particular crystallography and cryo-electron microscopy, have created an increased demand for the refinement of atomic models against low-resolution experimental data. One way to compensate for the lack of high-resolution experimental data is to use a priori information about model geometry that can be utilized in refinement in the form of stereochemical restraints or constraints. Here, the definition and calculation of the restraints that can be imposed on planar atomic groups, in particular the angle between such groups, are described. Detailed derivations of the restraint targets and their gradients are provided so that they can be readily implemented in other contexts. Practical implementations of the restraints, and of associated data structures, in the Computational Crystallography Toolbox (cctbx) are presented.
- Published
- 2015
31. Optimisation de forme en forgeage 3D
- Author
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Do, Tien Tho, Centre de Mise en Forme des Matériaux (CEMEF), MINES ParisTech - École nationale supérieure des mines de Paris, Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), École Nationale Supérieure des Mines de Paris, and Lionel Fourment
- Subjects
Numerical Analysis ,Etat Adjoint ,Forging process ,Optimisation de forme ,Analyse numérique ,[SPI]Engineering Sciences [physics] ,Sensitivity Analysis ,Shape optimization ,Adjoint State ,Finite Element Method ,Continuum mechanical ,Mécanique des milieux continus ,Gradient Calculation ,Calcul du gradient ,Optimisation algorithm ,Modélisation numérique ,Forgeage ,Numerical Simulation ,Algorithmes d'optimisation ,Eléments Finis - Abstract
This study focuses on shape optimization for 3D forging process. The problems to be solved consist in searching the optimal shape of the initial work piece or of the preform tool in order to minimize an objective function F which represents a measure of non-quality defined by the designer. These are often multi optima problems in which the necessary time for a cost function evaluation is very long (about a day or more). This work aims at developping an optimization module that permits to localize the global optimum within a reasonable cost (less than 50 calculations of objective function per optimization). The process simulation is carried out using the FORGE3® finite element software. The axisymmetric initial shape of the workpiece or die is parameterized using quadratic segments or Bspline curves. Several objective functions are considered, like the forging energy, the forging force or a surface defect criterion. The gradient of these objective functions is obtained by the adjoint-state method and semi-analytical differentiation. In this work, this gradient calculation (initiated in M. Laroussi's thesis) has been extended to another type of parameter "the parameters that control the shape of tool preform". Different optimization algorithms are tested for 3D applications: a standard BFGS algorithm, a moving asymptote algorithm, an evolution strategies algorithm enhanced with a response surface method based on Kriging and two new hybrid evolutionary algorithms proposed during this work. This hybrid approach consists in coupling a genetic algorithm to a response surface method that uses gradient information to dramatically reduce the number of problem simulations. All studied algorithms are compared for two 3D industrial tests, using rather coarse meshes. They make it possible to improve the initial design and to decrease the total forming energy and/or a surface defect criterion. Numerical results show the feasibility of such approaches, i.e. the achieving of satisfactory solutions within a limited number of 3D simulations, less than fifty.; Ce travail de thèse a pour but l'optimisation de forme en forgeage 3D. Les problèmes à résoudre consistent à chercher la forme optimale du lopin initial ou des outils de préforme afin de minimiser une fonction coût F qui représente une mesure de non-qualité définie par les industriels. Ce sont souvent des problèmes multi optima, et le temps nécessaire pour une évaluation de la fonction coût est très élevé (de l'ordre de la journée). L'objectif de cette thèse est de construire un module d'optimisation automatique qui permet de localiser l'extremum global à un coût raisonnable (moins de 50 calculs de la fonction coût à chaque optimisation). La simulation du procédé est effectuée avec le logiciel éléments finis FORGE3®. Les formes axisymétrique des pièces initiales ou des outils de préforme (dans le cadre du forgeage multi-passes) sont paramétrées en utilisant des polygônes quadratiques ou des courbes Bsplines. Différentes fonctions coûts sont considérées, comme l'énergie totale de forgeage ou la mesure non-qualité de la surface (défaut de repli). Le gradient de ces fonctions coûts est obtenu par la méthode de l'Etat Adjoint combinée avec la méthode de différentiation semi-analytique. Dans ce travail, afin d'aborder une famille de procédés de forgeage plus vaste, ce calcul du gradient (initié dans la thèse de M. Laroussi) a été étendu aux paramètres de forme des outils de préformes dans le cadre du forgeage multi passes.Différents algorithmes d'optimisation ont été étudiés : un algorithme BFGS standard, un algorithme de type asymptotes mobiles, une stratégie d'évolution couplée avec une surface de réponse basée sur le Krigeage et deux nouveaux algorithmes hybrides proposés dans le cadre de ce travail. Cette approche hybride consiste à coupler un algorithme génétique avec une méthode de surface de réponse pour réduire le nombre d'évaluations de la fonction coût. Tous les algorithmes étudiés sont comparés sur deux problèmes caractéristiques de forgeage 3D, respectivement l'optimisation de la géométrie de la préforme et celle des outils de préforme. Les résultats obtenus montrent la faisabilité de l'optimisation de forme en forgeage 3D, c'est-à-dire l'obtention de résultats satisfaisant en moins de 50 simulations 3D et la robustesse des algorithmes à base de méta-modèle.
- Published
- 2006
32. Shape optimization for 3D forging process
- Author
-
Do, Tien Tho, Centre de Mise en Forme des Matériaux (CEMEF), MINES ParisTech - École nationale supérieure des mines de Paris, Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), École Nationale Supérieure des Mines de Paris, and Lionel Fourment
- Subjects
Numerical Analysis ,Etat Adjoint ,Forging process ,Optimisation de forme ,Analyse numérique ,[SPI]Engineering Sciences [physics] ,Sensitivity Analysis ,Shape optimization ,Adjoint State ,Finite Element Method ,Continuum mechanical ,Mécanique des milieux continus ,Gradient Calculation ,Calcul du gradient ,Optimisation algorithm ,Modélisation numérique ,Forgeage ,Numerical Simulation ,Algorithmes d'optimisation ,Eléments Finis - Abstract
This study focuses on shape optimization for 3D forging process. The problems to be solved consist in searching the optimal shape of the initial work piece or of the preform tool in order to minimize an objective function F which represents a measure of non-quality defined by the designer. These are often multi optima problems in which the necessary time for a cost function evaluation is very long (about a day or more). This work aims at developping an optimization module that permits to localize the global optimum within a reasonable cost (less than 50 calculations of objective function per optimization). The process simulation is carried out using the FORGE3® finite element software. The axisymmetric initial shape of the workpiece or die is parameterized using quadratic segments or Bspline curves. Several objective functions are considered, like the forging energy, the forging force or a surface defect criterion. The gradient of these objective functions is obtained by the adjoint-state method and semi-analytical differentiation. In this work, this gradient calculation (initiated in M. Laroussi's thesis) has been extended to another type of parameter "the parameters that control the shape of tool preform". Different optimization algorithms are tested for 3D applications: a standard BFGS algorithm, a moving asymptote algorithm, an evolution strategies algorithm enhanced with a response surface method based on Kriging and two new hybrid evolutionary algorithms proposed during this work. This hybrid approach consists in coupling a genetic algorithm to a response surface method that uses gradient information to dramatically reduce the number of problem simulations. All studied algorithms are compared for two 3D industrial tests, using rather coarse meshes. They make it possible to improve the initial design and to decrease the total forming energy and/or a surface defect criterion. Numerical results show the feasibility of such approaches, i.e. the achieving of satisfactory solutions within a limited number of 3D simulations, less than fifty.; Ce travail de thèse a pour but l'optimisation de forme en forgeage 3D. Les problèmes à résoudre consistent à chercher la forme optimale du lopin initial ou des outils de préforme afin de minimiser une fonction coût F qui représente une mesure de non-qualité définie par les industriels. Ce sont souvent des problèmes multi optima, et le temps nécessaire pour une évaluation de la fonction coût est très élevé (de l'ordre de la journée). L'objectif de cette thèse est de construire un module d'optimisation automatique qui permet de localiser l'extremum global à un coût raisonnable (moins de 50 calculs de la fonction coût à chaque optimisation). La simulation du procédé est effectuée avec le logiciel éléments finis FORGE3®. Les formes axisymétrique des pièces initiales ou des outils de préforme (dans le cadre du forgeage multi-passes) sont paramétrées en utilisant des polygônes quadratiques ou des courbes Bsplines. Différentes fonctions coûts sont considérées, comme l'énergie totale de forgeage ou la mesure non-qualité de la surface (défaut de repli). Le gradient de ces fonctions coûts est obtenu par la méthode de l'Etat Adjoint combinée avec la méthode de différentiation semi-analytique. Dans ce travail, afin d'aborder une famille de procédés de forgeage plus vaste, ce calcul du gradient (initié dans la thèse de M. Laroussi) a été étendu aux paramètres de forme des outils de préformes dans le cadre du forgeage multi passes.Différents algorithmes d'optimisation ont été étudiés : un algorithme BFGS standard, un algorithme de type asymptotes mobiles, une stratégie d'évolution couplée avec une surface de réponse basée sur le Krigeage et deux nouveaux algorithmes hybrides proposés dans le cadre de ce travail. Cette approche hybride consiste à coupler un algorithme génétique avec une méthode de surface de réponse pour réduire le nombre d'évaluations de la fonction coût. Tous les algorithmes étudiés sont comparés sur deux problèmes caractéristiques de forgeage 3D, respectivement l'optimisation de la géométrie de la préforme et celle des outils de préforme. Les résultats obtenus montrent la faisabilité de l'optimisation de forme en forgeage 3D, c'est-à-dire l'obtention de résultats satisfaisant en moins de 50 simulations 3D et la robustesse des algorithmes à base de méta-modèle.
- Published
- 2006
33. Front-Tracking of Fluiddynamic Problems with the Level-Function
- Author
-
Voelker, Frank and Hänel, Dieter
- Subjects
incompressible-compressible solver ,Astrophysics::High Energy Astrophysical Phenomena ,detonation ,shock-reflections ,wave calculations ,gradient calculation ,bubble caculation ,inner-boundary condition ,zonal solution ,flux-separation ,ddc:620 ,ddc:62 ,Fakultät für Ingenieurwissenschaften » Maschinenbau und Verfahrenstechnik ,numerics - Abstract
The present level-set-algorithm describes a front-tracking method to calculate discontinuities of fluiddynamic problems as shocks, detonations or material-discontinuities as bubbles on arbitrary grids.Beside the description of the classical local-level-set algorithm an extension is presented to overcome restrictions of this classical method. An evaluation of the accuracy of this method is done in the combination with the caculated examples as bow-shocks in a 2D and 3D frame, 2D detonation, zonal-solution and two phase-flow computations.
- Published
- 2005
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