521 results on '"Gould KL"'
Search Results
2. Anatomic versus Physiologic Assessment of Coronary Artery Disease: Role of CFR, FFR, and PET Imaging in Revascularization Decision-Making
- Author
-
Gould KL, Johnson NP, Bateman TM, Beanlands RS, Bengel FM, Bober R, CAMICI , PAOLO, Cerqueira MD, Chow BJW, Di Cali MF, Dorbala S, Gewirtz H, Gropler RJ, Kaufmann PA, Knaapen P, Knuuti J, Merhige ME, Rentrop KP, Ruddy TD, Schelbert HR, Shindler TH, Schwaiger M., Gould, Kl, Johnson, Np, Bateman, Tm, Beanlands, R, Bengel, Fm, Bober, R, Camici, Paolo, Cerqueira, Md, Chow, Bjw, Di Cali, Mf, Dorbala, S, Gewirtz, H, Gropler, Rj, Kaufmann, Pa, Knaapen, P, Knuuti, J, Merhige, Me, Rentrop, Kp, Ruddy, Td, Schelbert, Hr, Shindler, Th, and Schwaiger, M.
- Published
- 2013
3. Can Percutaneous Transluminal Coronary Angioplasty be Considered Successful for Managing Coronary Artery Disease?
- Author
-
Gould Kl
- Subjects
Coronary angiography ,Percutaneous transluminal coronary angioplasty ,medicine.medical_specialty ,Treatment outcome ,Coronary Disease ,Coronary disease ,Coronary Angiography ,Coronary artery disease ,Patient Education as Topic ,Recurrence ,Internal medicine ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Angioplasty, Balloon, Coronary ,Diagnostic Errors ,business.industry ,Contraindications ,medicine.disease ,Treatment Outcome ,Cardiology ,Diet, Atherogenic ,Clinical Competence ,Clinical competence ,Cardiology and Cardiovascular Medicine ,business - Published
- 1991
4. Myocardial perfusion after cholesterol lowering
- Author
-
Gould Kl
- Subjects
medicine.medical_specialty ,business.industry ,Biochemistry (medical) ,Cholesterol lowering ,Coronary Disease ,Cholesterol ,Internal medicine ,Coronary Circulation ,Internal Medicine ,medicine ,Cardiology ,Humans ,Cardiology and Cardiovascular Medicine ,business ,Perfusion ,Diet, Fat-Restricted ,Tomography, Emission-Computed - Published
- 1996
5. Functional measures of coronary stenosis severity at cardiac catheterization
- Author
-
Gould Kl
- Subjects
Cardiac Catheterization ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Coronary Disease ,Coronary arteriography ,Blood flow ,Coronary stenosis ,Coronary Angiography ,medicine.disease ,Coronary heart disease ,Stenosis ,Text mining ,Coronary Circulation ,Internal medicine ,Cardiology ,Humans ,Medicine ,Cardiology and Cardiovascular Medicine ,business ,Cardiac catheterization - Published
- 1990
6. Partial volume correction incorporating Rb-82 positron range for quantitative myocardial perfusion PET based on systolic-diastolic activity ratios and phantom measurements.
- Author
-
Johnson NP, Sdringola S, Gould KL, Johnson, Nils P, Sdringola, Stefano, and Gould, K Lance
- Abstract
Background: Quantitative myocardial PET perfusion imaging requires partial volume corrections.Methods: Patients underwent ECG-gated, rest-dipyridamole, myocardial perfusion PET using Rb-82 decay corrected in Bq/cc for diastolic, systolic, and combined whole cycle ungated images. Diastolic partial volume correction relative to systole was determined from the systolic/diastolic activity ratio, systolic partial volume correction from phantom dimensions comparable to systolic LV wall thicknesses and whole heart cycle partial volume correction for ungated images from fractional systolic-diastolic duration for systolic and diastolic partial volume corrections.Results: For 264 PET perfusion images from 159 patients (105 rest-stress image pairs, 54 individual rest or stress images), average resting diastolic partial volume correction relative to systole was 1.14 ± 0.04, independent of heart rate and within ±1.8% of stress images (1.16 ± 0.04). Diastolic partial volume corrections combined with those for phantom dimensions comparable to systolic LV wall thickness gave an average whole heart cycle partial volume correction for ungated images of 1.23 for Rb-82 compared to 1.14 if positron range were negligible as for F-18.Conclusion: Quantitative myocardial PET perfusion imaging requires partial volume correction, herein demonstrated clinically from systolic/diastolic absolute activity ratios combined with phantom data accounting for Rb-82 positron range. [ABSTRACT FROM AUTHOR]- Published
- 2011
- Full Text
- View/download PDF
7. Positron emission tomography in coronary artery disease.
- Author
-
Gould KL and Gould, K Lance
- Published
- 2007
- Full Text
- View/download PDF
8. Invasive Procedures in Acute Myocardial Infarction
- Author
-
Gould Kl
- Subjects
medicine.medical_specialty ,Randomization ,business.industry ,medicine.medical_treatment ,General Medicine ,Revascularization ,medicine.disease ,Coronary revascularization ,Internal medicine ,Medicare population ,Cardiology ,Medicine ,Myocardial infarction ,Outcomes research ,business ,Intensive care medicine ,Survival analysis ,Cardiac catheterization - Abstract
The article entitled "Does More Intensive Treatment of Acute Myocardial Infarction in the Elderly Reduce Mortality? Analysis Using Instrumental Variables" by McClellan et al 1 in this issue ofThe Journalis important for several reasons. The authors describe a new method in medical outcomes research called instrumental variables estimation. In principle, this approach eliminates the bias of patient selection on mortality in the Medicare population receiving varying intensities of treatment for acute myocardial infarction, particularly cardiac catheterization and associated coronary revascularization. The authors argue that this approach has the same effect as prospective randomization in eliminating unrecognized biases of patient selection on outcomes of differing treatment intensities. The article makes the following conclusions for the Medicare population: (1) after acute myocardial infarction, cardiac catheterization and associated revascularization are performed less frequently in women and black men than in white men; (2) cardiac catheterization and associated revascularization have a marginal
- Published
- 1994
9. Not all randomized trials are equal.
- Author
-
Gould KL and Gould, K Lance
- Published
- 2007
- Full Text
- View/download PDF
10. A Slanting Light Guide Analog Decoding High-resolution Detector for Positron Emission Tomography Camera
- Author
-
UCL, Wong, WH., Jing, M., Bendriem, B., Hartz, R., Mullani, N., Gould, KL., Michel, Caroline, UCL, Wong, WH., Jing, M., Bendriem, B., Hartz, R., Mullani, N., Gould, KL., and Michel, Caroline
- Published
- 1987
11. 9:30—9:45: First Pass FDG Measured Blood Flow in Tumors: A Comparison with O-15 Labeled Water Measured Blood Flow
- Author
-
Mullani, NA, Herbst, RS, Abbruzzese, JL, Barron, B, Lamki, L, Charnsangavej, C, Kim, E, Tran, HT, Jiwani, A, and Gould, KL
- Published
- 2000
- Full Text
- View/download PDF
12. 9:00—9:15: Antiangiogenic Treatment with Endostatin Results in Uncoupling of Blood Flow and Glucose Metabolism in Human Tumors
- Author
-
Mullani, NA, Herbst, RS, Abbruzzese, JL, Charnsangavej, C, Kim, E, Tran, HT, Barron, B, Lamki, L, and Gould, KL
- Published
- 2000
- Full Text
- View/download PDF
13. 9:45—10:00: Superimposition of EBCT Determined Coronary Calcium Deposits onto Myocardial PET Perfusion Images by Rubidium-82 and Nitrogen-13 Ammonia for Assessment of Flow Limiting Defects
- Author
-
Mullani, NA, Brandt, M, Strite, D, Hartz, R, Allbright, M, Boyd, D, and Gould, KL
- Published
- 2000
- Full Text
- View/download PDF
14. New Technology for Coronary Heart Disease
- Author
-
Gould Kl
- Subjects
medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Streptokinase ,Computed tomography ,General Medicine ,Coronary disease ,medicine.disease ,Coronary heart disease ,Coronary artery disease ,Coronary occlusion ,Internal medicine ,Cardiology ,Medicine ,Myocardial infarction ,Imaging technique ,business ,medicine.drug - Abstract
JAMA: Dr Gould, what is your perspective on the future of cardiology? Gould: I think that cardiology, as a field, will move into a completely new era of diagnosis and treatment of coronary heart disease. Cardiologists classically have been fairly conservative. We do the basic physiological studies. We treat myocardial infarctions conservatively. Typically, we have treated only the complications but haven't intervened to terminate the basic pathology or the basic event. I foresee a revolution in (1) the early diagnosis and cure of coronary artery disease and (2) the aggressive therapy and reversal of acute myocardial infarction. JAMA: What is the future for the new generation of such diagnostic studies as the noninvasive assessment of coronary occlusion using positron-emission computed tomography? Gould: The positron imaging technique allows us not only to diagnose noninvasively early coronary disease or the flow effects of coronary disease, but also to analyze the metabolism of
- Published
- 1981
15. Noninvasive approach to assess coronary artery stenoses and ischemia.
- Author
-
Johnson NP, Kirkeeide RL, Gould KL, Johnson, Nils P, Kirkeeide, Richard L, and Gould, K Lance
- Published
- 2013
- Full Text
- View/download PDF
16. Letter to the Editor regarding "PET: is myocardial flow quantification a clinical reality?".
- Author
-
Johnson NP, Gould KL, Johnson, Nils P, and Gould, K Lance
- Published
- 2012
- Full Text
- View/download PDF
17. Imaging of Cerebral Blood Flow and Metabolism in Amblyopia by Positron Emission Tomography.
- Author
-
Demer, JL, Noorden, GK, Volkow, ND, Gould, KL, and Sedwick, Lyn A.
- Published
- 1988
18. 9:30—9:45
- Author
-
Mullani, NA, Herbst, RS, Abbruzzese, JL, Barron, B, Lamki, L, Charnsangavej, C, Kim, E, Tran, HT, Jiwani, A, and Gould, KL
- Abstract
The purpose of this study was to determine if the first-pass of FDG can be used to measure regional blood flow in tumors in the absence of perfusion imaging with a known blood flow tracer.
- Published
- 2000
- Full Text
- View/download PDF
19. 9:45—10:00
- Author
-
Mullani, NA, Brandt, M, Strite, D, Hartz, R, Allbright, M, Boyd, D, and Gould, KL
- Abstract
Calcium localization by Electron Beam CT (EBCT) in the coronary arteries is becoming an important non-invasive method for screening asymptomatic patients for early coronary atherosclerosis. However, the relationship between coronary artery calcium deposits and myocardial perfusion abnormalities has not been established. We have developed software to superimpose location of coronary calcium by EBCT onto PET myocardial perfusion images, so that we can determine the role of location and amount of calcium in the arteries to flow-limiting perfusion defects by PET.
- Published
- 2000
- Full Text
- View/download PDF
20. Combined intense lifestyle and pharmacologic lipid treatment further reduce coronary events and myocardial perfusion abnormalities compared with usual-care cholesterol-lowering drugs in coronary artery disease.
- Author
-
Sdringola S, Nakagawa K, Nakagawa Y, Yusuf SW, Boccalandro F, Mullani N, Haynie M, Hess MJ, Gould KL, Sdringola, Stefano, Nakagawa, Keiichi, Nakagawa, Yuko, Yusuf, S Wamique, Boccalandro, Fernando, Mullani, Nizar, Haynie, Mary, Hess, Mary Jane, and Gould, K Lance
- Abstract
Objectives: The purpose of this study was to determine if combined intense lifestyle and pharmacologic lipid treatment reduce myocardial perfusion abnormalities and coronary events in comparison to usual-care cholesterol-lowering drugs and whether perfusion changes predict outcomes.Background: Lifestyle and lipid drugs separately benefit patients with coronary artery disease (CAD).Methods: A total of 409 patients with CAD, who underwent myocardial perfusion imaging by dipyridamole positron emission tomography at baseline and after 2.6 years, had quantitative size/severity of perfusion defects measured objectively by automated software with follow-up for five additional years for coronary artery bypass graft, percutaneous coronary intervention, myocardial infarction, or cardiac death. Patients were categorized blindly according to prospective, predefined criteria as "poor" treatment without diet or lipid drugs, or smoking; "moderate" treatment on American Heart Association diet and lipid-lowering drugs or on strict low-fat diet (<10% of calories) without lipid drugs; and "maximal" treatment with diet <10% of calories as fat, regular exercise, and lipid active drugs dosed to target goals of low-density lipoproteins <2.3 mmol/l (90 mg/dl), high-density lipoproteins >1.2 mmol/l (45 mg/dl), and triglycerides <1.1 mmol/l (100 mg/dl).Results: Over five years, coronary events occurred in 6.6%, 20.3%, and 30.6% of patients on maximal, moderate, and poor treatment, respectively (p = 0.001). Size/severity of perfusion abnormalities significantly decreased for patients receiving maximal treatment and increased for patients undergoing moderate and poor treatment (p = 0.003 and 0.0001, respectively). Combined intense lifestyle change plus lipid active drugs and severity/change of perfusion abnormalities independently predicted cardiac events.Conclusions: Intense lifestyle and pharmacologic lipid treatment reduce size/severity of myocardial perfusion abnormalities and cardiac events compared with usual-care cholesterol-lowering drugs. Perfusion changes parallel treatment intensity and predict outcomes. [ABSTRACT FROM AUTHOR]- Published
- 2003
- Full Text
- View/download PDF
21. Prognostic value of fractional flow reserve: linking physiologic severity to clinical outcomes
- Author
-
Johnson, N.P., Toth, G.G., Lai, D., Zhu, H., Acar, G., Agostoni, P., Appelman, Y., Arslan, F., Barbato, E., Chen, S.-L., Di Serafino, L., Dominguez-Franco, A.J., Dupouy, P., Esen, A.M., Esen, O.B., Hamilos, M., Iwasaki, K., Jensen, L.O., Jimenez-Navarro, M.F., Katritsis, D.G., Kocaman, S.A., Koo, B.-K., Lopez-Palop, R., Lorin, J.D., Miller, L.H., Muller, O., Nam, C.-W., Oud, N., Puymirat, E., Rieber, J., Rioufol, G., Rodes-Cabau, J., Sedlis, S.P., Takeishi, Y., Tonino, P.A.L., Van Belle, E., Verna, E., Werner, G.S., Fearon, W.F., Pijls, N. H. J., De Bruyne, B., Gould, K.L., Cardiology, ICaR - Heartfailure and pulmonary arterial hypertension, Johnson, Np, T?th, Gg, Lai, D, Zhu, H, A?ar, G, Agostoni, P, Appelman, Y, Arslan, F, Barbato, Emanuele, Chen, Sl, Di Serafino, L, Dom?nguez Franco, Aj, Dupouy, P, Esen, Am, Esen, Ob, Hamilos, M, Iwasaki, K, Jensen, Lo, Jim?nez Navarro, Mf, Katritsis, Dg, Kocaman, Sa, Koo, Bk, L?pez Palop, R, Lorin, Jd, Miller, Lh, Muller, O, Nam, Cw, Oud, N, Puymirat, E, Rieber, J, Rioufol, G, Rod?s Cabau, J, Sedlis, Sp, Takeishi, Y, Tonino, Pa, Van Belle, E, Verna, E, Werner, G, Fearon, Wf, Pijls, Nh, De Bruyne, B, Gould, Kl, Cardiovasculaire, métabolisme, diabétologie et nutrition (CarMeN), Hospices Civils de Lyon (HCL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Université de Lyon-Institut National des Sciences Appliquées (INSA)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Institut National de la Recherche Agronomique (INRA), Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Hospices Civils de Lyon (HCL), and Cardiovascular Biomechanics
- Subjects
[SDV]Life Sciences [q-bio] ,Coronary Artery Disease ,Kaplan-Meier Estimate ,Prognosis ,Fractional Flow Reserve ,Severity of Illness Index ,meta-analysis ,Coronary Artery Disease/*diagnosis/mortality/*physiopathology ,Fractional Flow Reserve, Myocardial ,Treatment Outcome ,Myocardial/*physiology ,threshold ,Humans ,prognosis ,fractional flow reserve - Abstract
BACKGROUND: Fractional flow reserve (FFR) has become an established tool for guiding treatment, but its graded relationship to clinical outcomes as modulated by medical therapy versus revascularization remains unclear.OBJECTIVES: The study hypothesized that FFR displays a continuous relationship between its numeric value and prognosis, such that lower FFR values confer a higher risk and therefore receive larger absolute benefits from revascularization.METHODS: Meta-analysis of study- and patient-level data investigated prognosis after FFR measurement. An interaction term between FFR and revascularization status allowed for an outcomes-based threshold.RESULTS: A total of 9,173 (study-level) and 6,961 (patient-level) lesions were included with a median follow-up of 16 and 14 months, respectively. Clinical events increased as FFR decreased, and revascularization showed larger net benefit for lower baseline FFR values. Outcomes-derived FFR thresholds generally occurred around the range 0.75 to 0.80, although limited due to confounding by indication. FFR measured immediately after stenting also showed an inverse relationship with prognosis (hazard ratio: 0.86, 95% confidence interval: 0.80 to 0.93; p < 0.001). An FFR-assisted strategy led to revascularization roughly half as often as an anatomy-based strategy, but with 20% fewer adverse events and 10% better angina relief.CONCLUSIONS: FFR demonstrates a continuous and independent relationship with subsequent outcomes, modulated by medical therapy versus revascularization. Lesions with lower FFR values receive larger absolute benefits from revascularization. Measurement of FFR immediately after stenting also shows an inverse gradient of risk, likely from residual diffuse disease. An FFR-guided revascularization strategy significantly reduces events and increases freedom from angina with fewer procedures than an anatomy-based strategy.
- Published
- 2014
22. Transitions From Basic Experimental to Clinical Coronary Pathophysiology for Guiding Chronic CAD Management.
- Author
-
Gould KL and Johnson NP
- Published
- 2024
- Full Text
- View/download PDF
23. New mutations in the core Schizosaccharomyces pombe spindle pole body scaffold Ppc89 reveal separable functions in regulating cell division.
- Author
-
Hanna SM, Tavafoghi B, Chen JS, Howard I, Ren L, Willet AH, and Gould KL
- Abstract
Centrosomes and spindle pole bodies (SPB) are important for mitotic spindle formation and also serve as signaling platforms. In the fission yeast Schizosaccharomyces pombe, genetic ablation and high-resolution imaging indicate that the ɑ-helical Ppc89 is central to SPB structure and function. Here, we developed and characterized conditional and truncation mutants of ppc89. Alleles with mutations in two predicted ɑ-helices near the C-terminus were specifically defective in anchoring Sid4, the scaffold for the septation initiation network (SIN), and proteins dependent on Sid4 (Cdc11, Dma1, Mto1 and Mto2). Artificial tethering of Sid4 to the SPB fully rescued these ppc89 mutants. Another ppc89 allele had mutations located throughout the coding region. While this mutant was also defective in Sid4 anchoring, it displayed additional defects including fragmented SPBs and forming and constricting a second cytokinetic ring in one daughter cell. These defects were shared with a ppc89 allele truncated of the most C-terminal predicted ɑ-helices that is still able to recruit Sid4 and the SIN. We conclude that Ppc89 not only tethers the SIN to the SPB but is also necessary for the integrity of the SPB and faithful coordination of cytokinesis with mitosis., (© The Author(s) 2024. Published by Oxford University Press on behalf of The Genetics Society of America.)
- Published
- 2024
- Full Text
- View/download PDF
24. The DNA Damage Repair Function of Fission Yeast CK1 Involves Targeting Arp8, a Subunit of the INO80 Chromatin Remodeling Complex.
- Author
-
Cullati SN, Akizuki K, Shan Y, Zhang E, Ren L, Guillen RX, Turner LA, Chen JS, Navarrete-Perea J, Elmore ZC, Gygi SP, and Gould KL
- Abstract
The CK1 family are conserved serine/threonine kinases with numerous substrates and cellular functions. The fission yeast CK1 orthologues Hhp1 and Hhp2 were first characterized as regulators of DNA repair, but the mechanism(s) by which CK1 activity promotes DNA repair had not been investigated. Here, we found that deleting Hhp1 and Hhp2 or inhibiting CK1 catalytic activities in yeast or in human cells increased double-strand breaks (DSBs). The primary pathways to repair DSBs, homologous recombination and nonhomologous end joining, were both less efficient in cells lacking Hhp1 and Hhp2 activity. To understand how Hhp1 and Hhp2 promote DNA damage repair, we identified new substrates of these enzymes using quantitative phosphoproteomics. We confirmed that Arp8, a component of the INO80 chromatin remodeling complex, is a bona fide substrate of Hhp1 and Hhp2 important for DNA repair. Our data suggest that Hhp1 and Hhp2 facilitate DNA repair by phosphorylating multiple substrates, including Arp8.
- Published
- 2024
- Full Text
- View/download PDF
25. Hybrid quantification of absolute perfusion requires accurate measurement of myocardial mass.
- Author
-
Johnson NP and Gould KL
- Subjects
- Humans, Myocardium pathology, Coronary Circulation, Coronary Angiography methods, Myocardial Perfusion Imaging methods
- Published
- 2024
- Full Text
- View/download PDF
26. Fission yeast Duc1 links to ER-PM contact sites and influences PM lipid composition and cytokinetic ring anchoring.
- Author
-
Willet AH, Park JS, Snider CE, Huang JJ, Chen JS, and Gould KL
- Subjects
- Phosphotransferases (Alcohol Group Acceptor) metabolism, Phosphotransferases (Alcohol Group Acceptor) genetics, Schizosaccharomyces metabolism, Schizosaccharomyces pombe Proteins metabolism, Schizosaccharomyces pombe Proteins genetics, Cytokinesis, Endoplasmic Reticulum metabolism, Cell Membrane metabolism, Phosphatidylinositol 4,5-Diphosphate metabolism
- Abstract
Cytokinesis is the final stage of the cell cycle that results in the physical separation of daughter cells. To accomplish cytokinesis, many organisms build an actin- and myosin-based cytokinetic ring (CR) that is anchored to the plasma membrane (PM). Defects in CR-PM anchoring can arise when the PM lipid phosphatidylinositol (4,5)-bisphosphate [PI(4,5)P2] is depleted. In Schizosaccharomyces pombe, reduced PM PI(4,5)P2 results in a CR that cannot maintain a medial position and slides toward one cell end, resulting in two differently sized daughter cells. S. pombe PM PI(4,5)P2 is synthesized by the phosphatidylinositol 4-phosphate 5-kinase (PI5-kinase) Its3, but what regulates this enzyme to maintain appropriate PM PI(4,5)P2 levels in S. pombe is not known. To identify Its3 regulators, we used proximity-based biotinylation, and the uncharacterized protein Duc1 was specifically detected. We discovered that Duc1 decorates the PM except at the cell division site and that its unique localization pattern is dictated by binding to the endoplasmic reticulum (ER)-PM contact site proteins Scs2 and Scs22. Our evidence suggests that Duc1 also binds PI(4,5)P2 and helps enrich Its3 at the lateral PM, thereby promoting PM PI(4,5)P2 synthesis and robust CR-PM anchoring., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2024. Published by The Company of Biologists Ltd.)
- Published
- 2024
- Full Text
- View/download PDF
27. How to differentiate obstructive from non-obstructive CAD with quantitative PET MPI using coronary flow capacity.
- Author
-
Johnson NP and Gould KL
- Published
- 2024
- Full Text
- View/download PDF
28. Quantitative myocardial perfusion in liver transplantation candidates: Poorly metabolized caffeine inhibition of vasodilatory stress.
- Author
-
Kitkungvan D, Johnson NP, Roby AE, Mendoza P, Bui L, Patel MB, Sander K, Harmon L, Kirkeeide R, and Gould KL
- Subjects
- Humans, Male, Female, Middle Aged, Coronary Circulation drug effects, Positron-Emission Tomography, Aged, Adult, Vasodilation drug effects, Caffeine blood, Liver Transplantation, Vasodilator Agents, Dipyridamole, Myocardial Perfusion Imaging methods, Dobutamine
- Abstract
Background: Data on cardiac positron emission tomography (PET) in liver transplantation (LT) candidates are limited with no prior study accounting for poorly metabolized caffeine reducing stress perfusion., Method: Consecutive LT candidates (n = 114) undergoing cardiac rest/stress PET were instructed to abstain from caffeine for 2 days extended to 5 and 7 days. Due to persistently high prevalence of measurable blood caffeine after 5-day caffeine abstinence, dipyridamole (n = 41) initially used was changed to dobutamine (n = 73). Associations of absolute flow, coronary flow reserve (CFR), detectable blood caffeine, and Modified End-Stage Liver Disease (MELD) score for liver failure severity were evaluated. Coronary flow data of LT candidates were compared to non-LT control group (n = 102 for dipyridamole, n = 29 for dobutamine)., Results: Prevalence of patients with detectable blood caffeine was 63.3%, 36.7% and 33.3% after 2-, 5- and 7-day of caffeine abstinence, respectively. MELD score was associated with detectable caffeine (odd ratio 1.18,P < 0.001). CFR was higher during dipyridamole stress without-caffeine versus with-caffeine (2.22 ± 0.80 vs 1.55 ± 0.37,P = 0.048) but lower than dobutamine stress (2.22 ± 0.80 vs 2.82 ± 1.02,P = 0.026). Mediation analysis suggested that the dominant association between CFR and MELD score in dipyridamole group derived from caffeine-impaired CFR and liver failure/caffeine interaction. CFR in LT candidates was lower than non-LT control population in both dipyridamole and dobutamine group., Conclusion: We demonstrate exceptionally high prevalence of detectable blood caffeine in LT candidates undergoing stress PET myocardial perfusion imaging resulting in reduced CFR with dipyridamole compared to dobutamine. The delayed caffeine clearance in LT candidates makes dobutamine a preferred stress agent in this population., (Copyright © 2024 University of Texas Health Science Center at Houston. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
29. Microvascular resistance reserve: Impact of autoregulation on its conceptual framework and practical implementation.
- Author
-
Johnson NP, Kirkeeide RL, and Gould KL
- Subjects
- Humans, Microvessels physiopathology, Microcirculation, Homeostasis, Vascular Resistance
- Published
- 2024
- Full Text
- View/download PDF
30. The core spindle pole body scaffold Ppc89 links the pericentrin orthologue Pcp1 to the fission yeast spindle pole body via an evolutionarily conserved interface.
- Author
-
Chen JS, Igarashi MG, Ren L, Hanna SM, Turner LA, McDonald NA, Beckley JR, Willet AH, and Gould KL
- Subjects
- Cell Cycle Proteins metabolism, Cell Cycle Proteins genetics, Microtubule-Associated Proteins metabolism, Antigens metabolism, Calmodulin metabolism, Protein Binding, Schizosaccharomyces metabolism, Schizosaccharomyces genetics, Schizosaccharomyces pombe Proteins metabolism, Schizosaccharomyces pombe Proteins genetics, Spindle Pole Bodies metabolism, Centrosome metabolism, Spindle Apparatus metabolism
- Abstract
Centrosomes and spindle pole bodies (SPBs) are important for mitotic spindle formation and serve as cellular signaling platforms. Although centrosomes and SPBs differ in morphology, many mechanistic insights into centrosome function have been gleaned from SPB studies. In the fission yeast Schizosaccharomyces pombe , the α-helical protein Ppc89, identified based on its interaction with the septation initiation network scaffold Sid4, comprises the SPB core. High-resolution imaging has suggested that SPB proteins assemble on the Ppc89 core during SPB duplication, but such interactions are undefined. Here, we define a connection between Ppc89 and the essential pericentrin Pcp1. Specifically, we found that a predicted third helix within Ppc89 binds the Pcp1 pericentrin-AKAP450 centrosomal targeting (PACT) domain complexed with calmodulin. Ppc89 helix 3 contains similarity to p resent i n the N -terminus of C ep57 (PINC) motifs found in the centrosomal proteins fly SAS-6 and human Cep57 and also to the S. cerevisiae SPB protein Spc42. These motifs bind pericentrin-calmodulin complexes and AlphaFold2 models suggest a homologous complex assembles in all four organisms. Mutational analysis of the S. pombe complex supports the importance of Ppc89-Pcp1 binding interface in vivo. Our studies provide insight into the core architecture of the S. pombe SPB and suggest an evolutionarily conserved mechanism of scaffolding pericentrin-calmodulin complexes for mitotic spindle formation., Competing Interests: Conflicts of interests: The authors declare no financial conflict of interest.
- Published
- 2024
- Full Text
- View/download PDF
31. Transient PP2A SIP complex localization to mitotic SPBs for SIN inhibition is mediated solely by the Csc1 FHA domain.
- Author
-
Willet AH, Ren L, Turner LA, and Gould KL
- Subjects
- Protein Domains, Signal Transduction, Spindle Apparatus metabolism, Schizosaccharomyces metabolism, Schizosaccharomyces pombe Proteins metabolism, Protein Phosphatase 2 metabolism, Cytokinesis physiology, Mitosis, Spindle Pole Bodies metabolism
- Abstract
Many organisms utilize an actin- and myosin-based cytokinetic ring (CR) to help complete cytokinesis. In Schizosaccharomyces pombe , the Septation Initiation Network (SIN) promotes proper CR function and stability. The SIN is a conserved and essential signaling network consisting of a GTPase and a cascade of kinases assembled at the spindle pole body (SPB). The PP2A SIN inhibitory phosphatase (SIP) complex related to the STRIPAK phosphatase complex is one inhibitor of SIN signaling. The SIP consists of Csc1, Csc2, Csc3, Csc4, Paa1, and the phosphatase subunit Ppa3. Here, we determine that the SIP is anchored at the SPB via the Csc1 FHA domain and that constitutive SPB localization of the SIP is lethal due to persistent SIN inhibition. Disrupting SIP docking at the SPB with a point mutation within the FHA domain or eliminating phosphatase activity by introducing a point mutation within Ppa3 resulted in intact SIP complexes without SIN inhibitory function. Lastly, we defined the unique features of Ppa3 that allow it, but not two other PP2A catalytic subunits, to incorporate into the SIP. Overall, we provide insight into how the SIP complex assembles, localizes, and functions to counteract the SIN with spatiotemporal precision during cytokinesis.
- Published
- 2024
- Full Text
- View/download PDF
32. Characterization of temperature-sensitive alleles of Schizosaccharomyces pombe septation initiation network components.
- Author
-
Turner LA, Willet AH, and Gould KL
- Abstract
The Schizosaccharomyces pombe septation initiation network (SIN) promotes cytokinesis and septation. Comprised of a protein kinase cascade triggered by activation of a small GTPase and inhibited by a two-component GAP that localize to the spindle pole bodies in a cell cycle specific manner. Here, we characterized temperature-sensitive mutants isolated in the 1990s in four SIN components. We determined the mutations within each cdc14 , cdc16 , sid1 , and sid2 mutant allele and analyzed their growth at different temperatures compared with known mutant alleles. The new mutants described here expand the toolkit for studying SIN signaling., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2024 by the authors.)
- Published
- 2024
- Full Text
- View/download PDF
33. Characterization of temperature-sensitive Schizosaccharomyces pombe mutants in the septation initiation network Spg1 GTPase.
- Author
-
Fletcher AB, Turner LA, Ren L, Willet AH, and Gould KL
- Abstract
The Schizosaccharomyces pombe GTPase, Spg1 , activates the septation initiation network (SIN) protein kinase cascade to trigger septation. In the absence of functional Spg1 , cells fail cytokinesis and become multinucleate. In this study, we characterize a set of temperature-sensitive spg1 alleles isolated in the 1990s. We identify the mutations within each new and previously characterized allele, characterize the extent of relative growth defects, and assess their interaction with other SIN alleles., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2024 by the authors.)
- Published
- 2024
- Full Text
- View/download PDF
34. Epicardial inflow versus myocardial distribution: average regional transmural coronary flow is not enough.
- Author
-
Johnson NP and Gould KL
- Subjects
- Humans, Pericardium diagnostic imaging, Coronary Vessels diagnostic imaging, Coronary Vessels physiopathology, Coronary Circulation physiology
- Published
- 2024
- Full Text
- View/download PDF
35. Substrate displacement of CK1 C-termini regulates kinase specificity.
- Author
-
Cullati SN, Akizuki K, Chen JS, Johnson JL, Yaron-Barir TM, Cantley LC, and Gould KL
- Subjects
- Humans, Amino Acid Sequence, Casein Kinase 1 epsilon metabolism, Casein Kinase 1 epsilon genetics, Catalytic Domain, Mutation, Peptides metabolism, Peptides chemistry, Phosphorylation, Protein Binding, Schizosaccharomyces metabolism, Schizosaccharomyces genetics, Substrate Specificity, Schizosaccharomyces pombe Proteins metabolism, Schizosaccharomyces pombe Proteins chemistry, Schizosaccharomyces pombe Proteins genetics
- Abstract
CK1 kinases participate in many signaling pathways, and their regulation is of meaningful biological consequence. CK1s autophosphorylate their C-terminal noncatalytic tails, and eliminating these tails increases substrate phosphorylation in vitro, suggesting that the autophosphorylated C-termini act as inhibitory pseudosubstrates. To test this prediction, we comprehensively identified the autophosphorylation sites on Schizosaccharomyces pombe Hhp1 and human CK1ε. Phosphoablating mutations increased Hhp1 and CK1ε activity toward substrates. Peptides corresponding to the C-termini interacted with the kinase domains only when phosphorylated, and substrates competitively inhibited binding of the autophosphorylated tails to the substrate binding grooves. Tail autophosphorylation influenced the catalytic efficiency with which CK1s targeted different substrates, and truncating the tail of CK1δ broadened its linear peptide substrate motif, indicating that tails contribute to substrate specificity as well. Considering autophosphorylation of both T220 in the catalytic domain and C-terminal sites, we propose a displacement specificity model to describe how autophosphorylation modulates substrate specificity for the CK1 family.
- Published
- 2024
- Full Text
- View/download PDF
36. Coronary Pathophysiology Underlying the Obesity Paradox.
- Author
-
Bui L, Patel M, and Gould KL
- Abstract
Competing Interests: The authors have received internal funding from Weatherhead PET Center for Preventing. Dr Gould is the applicant for 510(k) FDA-cleared HeartSee K171303 PET software. To avoid any conflict of interest, Dr Gould has assigned any royalties arising from PET software to UTHealth for research or student scholarships. UTHealth has a financial interest related to the HeartSee intellectual property via its affiliation with The Weatherhead P.E.T. Imaging Center.
- Published
- 2024
- Full Text
- View/download PDF
37. Generation and characterization of temperature-sensitive alleles encoding GPI anchored proteins Psu1 and Dfg502 in Schizosaccharomyces pombe .
- Author
-
Tavafoghi B, Ren L, Gould KL, and Willet AH
- Abstract
Glycosyl-phosphatidylinositol (GPI) anchored proteins are implicated in remodeling of the yeast cell wall during growth and division. Schizosaccharomyces pombe proteins, Psu1 , Dfg501 , and Dfg502 are predicted GPI anchored proteins with likely cell wall modifying activity. Here, we isolated and characterized null and temperature-sensitive alleles that will allow further analysis of the function of these proteins and S. pombe cell wall formation. Our data confirm that Psu1 is necessary for cell separation, maintaining proper cell shape, and viability. Additionally, we found that Dfg501 and Dfg502 share a redundant and essential function necessary for cell separation and viability., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2024 by the authors.)
- Published
- 2024
- Full Text
- View/download PDF
38. MAPK-dependent control of mitotic progression in S. pombe.
- Author
-
Iglesias-Romero AB, Soto T, Flor-Parra I, Salas-Pino S, Ruiz-Romero G, Gould KL, Cansado J, and Daga RR
- Subjects
- Anaphase-Promoting Complex-Cyclosome genetics, Anaphase-Promoting Complex-Cyclosome metabolism, Cdc20 Proteins genetics, Cdc20 Proteins metabolism, Cell Cycle Proteins metabolism, Mitosis, Spindle Apparatus metabolism, Schizosaccharomyces genetics, Schizosaccharomyces metabolism, Schizosaccharomyces pombe Proteins genetics, Schizosaccharomyces pombe Proteins metabolism
- Abstract
Background: Mitogen-activated protein kinases (MAPKs) preserve cell homeostasis by transducing physicochemical fluctuations of the environment into multiple adaptive responses. These responses involve transcriptional rewiring and the regulation of cell cycle transitions, among others. However, how stress conditions impinge mitotic progression is largely unknown. The mitotic checkpoint is a surveillance mechanism that inhibits mitotic exit in situations of defective chromosome capture, thus preventing the generation of aneuploidies. In this study, we investigate the role of MAPK Pmk1 in the regulation of mitotic exit upon stress., Results: We show that Schizosaccharomyces pombe cells lacking Pmk1, the MAP kinase effector of the cell integrity pathway (CIP), are hypersensitive to microtubule damage and defective in maintaining a metaphase arrest. Epistasis analysis suggests that Pmk1 is involved in maintaining spindle assembly checkpoint (SAC) signaling, and its deletion is additive to the lack of core SAC components such as Mad2 and Mad3. Strikingly, pmk1Δ cells show up to twofold increased levels of the anaphase-promoting complex (APC/C) activator Cdc20
Slp1 during unperturbed growth. We demonstrate that Pmk1 physically interacts with Cdc20Slp1 N-terminus through a canonical MAPK docking site. Most important, the Cdc20Slp1 pool is rapidly degraded in stressed cells undergoing mitosis through a mechanism that requires MAPK activity, Mad3, and the proteasome, thus resulting in a delayed mitotic exit., Conclusions: Our data reveal a novel function of MAPK in preventing mitotic exit and activation of cytokinesis in response to stress. The regulation of Cdc20Slp1 turnover by MAPK Pmk1 provides a key mechanism by which the timing of mitotic exit can be adjusted relative to environmental conditions., (© 2024. The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
39. Generation and characterization of temperature-sensitive alleles of the glucanosyltransferase Gas1 in Schizosaccharomyces pombe.
- Author
-
Howard IV, Tavafoghi B, Igarashi MG, Ren L, Willet AH, and Gould KL
- Abstract
The Schizosaccharomyces pombe Gas family of β-1,3-glucanosyltransferases modify the cell wall by elongating β-1,3-glucan chains. While gas1Δ cells are inviable under standard laboratory growth conditions, they are viable in the presence of an osmotic stabilizer. Even under these conditions however, gas1Δ cells are slow-growing and display cell separation and morphology defects. Here, we isolated and characterized two gas1 temperature-sensitive alleles. Our data support that Gas1 is the primary S. pombe β-1,3-glucanosyltransferase important for cell separation and cell viability and provide useful tools for further analysis of S. pombe cell wall formation., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2024 by the authors.)
- Published
- 2024
- Full Text
- View/download PDF
40. Should We Stent Vulnerable, But Asymptomatic, Lesions?
- Author
-
Johnson NP, Gould KL, and Narula J
- Subjects
- Humans, Treatment Outcome, Stents, Ultrasonography, Interventional, Coronary Angiography, Coronary Vessels diagnostic imaging, Coronary Artery Disease diagnostic imaging, Coronary Artery Disease therapy, Fractional Flow Reserve, Myocardial
- Abstract
Competing Interests: Funding Support and Author Disclosures Drs Johnson and Gould report no direct relationships but outside of the present work receive internal funding from the Weatherhead P.E.T. Imaging Center; and have patents pending on diagnostic methods for quantifying aortic stenosis and TAVI physiology, and on methods to correct pressure tracings from fluid-filled catheters. Dr Johnson has received institutional research support from Neovasc/Shockwave (PET core lab for COSIRA-II. Dr Gould is the 510(k) applicant for several cardiac PET software packages approved by the FDA (K113754, K143664, K171303, K202679, K231731) but does not receive any licensing fees paid to UTHealth by Bracco Diagnostics and GE Healthcare. Dr Narula has reported that he has no relationships relevant to the contents of this paper to disclose.
- Published
- 2024
- Full Text
- View/download PDF
41. The Cdc14 phosphatase, Clp1, does not affect genome expression.
- Author
-
Lopez Maury L, Ren L, Hassan S, Bähler J, and Gould KL
- Abstract
Schizosaccharomyces pombe Clp1 is a Cdc14-family phosphatase that reverses mitotic Cdk1 phosphorylation. Despite evolutionary conservation, Clp1 's mammalian orthologs do not share this function. Rather, higher eukaryotic Cdc14 enzymes act in DNA repair, ciliogenesis, and gene regulation. To examine if Clp1 regulates gene expression, we compared the transcriptional profiles of cells lacking Clp1 function to that of wildtype. Because clp1∆ cells are sensitive to the actin depolymerizing drug, LatrunculinA, we also investigated whether a transcriptional response was involved. Our results indicate that Clp1 does not detectably affect gene expression and highlight the organism-specific functions of this conserved phosphatase family., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2024 by the authors.)
- Published
- 2024
- Full Text
- View/download PDF
42. Coronary flow capacity and survival prediction after revascularization: physiological basis and clinical implications.
- Author
-
Gould KL, Johnson NP, Roby AE, Bui L, Kitkungvan D, Patel MB, Nguyen T, Kirkeeide R, Haynie M, Arain SA, Charitakis K, Dhoble A, Smalling R, Nascimbene A, Jumean M, Kumar S, Kar B, Sdringola S, Estrera A, Gregoric I, Lai D, Li R, McPherson D, and Narula J
- Subjects
- Humans, Rubidium Radioisotopes, Prospective Studies, Positron-Emission Tomography methods, Coronary Angiography methods, Coronary Artery Disease
- Abstract
Background and Aims: Coronary flow capacity (CFC) is associated with an observed 10-year survival probability for individual patients before and after actual revascularization for comparison to virtual hypothetical ideal complete revascularization., Methods: Stress myocardial perfusion (mL/min/g) and coronary flow reserve (CFR) per pixel were quantified in 6979 coronary artery disease (CAD) subjects using Rb-82 positron emission tomography (PET) for CFC maps of artery-specific size-severity abnormalities expressed as percent left ventricle with prospective follow-up to define survival probability per-decade as fraction of 1.0., Results: Severely reduced CFC in 6979 subjects predicted low survival probability that improved by 42% after revascularization compared with no revascularization for comparable severity (P = .0015). For 283 pre-and-post-procedure PET pairs, severely reduced regional CFC-associated survival probability improved heterogeneously after revascularization (P < .001), more so after bypass surgery than percutaneous coronary interventions (P < .001) but normalized in only 5.7%; non-severe baseline CFC or survival probability did not improve compared with severe CFC (P = .00001). Observed CFC-associated survival probability after actual revascularization was lower than virtual ideal hypothetical complete post-revascularization survival probability due to residual CAD or failed revascularization (P < .001) unrelated to gender or microvascular dysfunction. Severely reduced CFC in 2552 post-revascularization subjects associated with low survival probability also improved after repeat revascularization compared with no repeat procedures (P = .025)., Conclusions: Severely reduced CFC and associated observed survival probability improved after first and repeat revascularization compared with no revascularization for comparable CFC severity. Non-severe CFC showed no benefit. Discordance between observed actual and virtual hypothetical post-revascularization survival probability revealed residual CAD or failed revascularization., (© The Author(s) 2023. Published by Oxford University Press on behalf of the European Society of Cardiology.)
- Published
- 2024
- Full Text
- View/download PDF
43. Evolving Cardiac Rehabilitation, Technology, and Coronary Pathophysiology.
- Author
-
Gould KL
- Abstract
Competing Interests: Declaration of Competing Interest The author has no competing interests to declare.
- Published
- 2024
- Full Text
- View/download PDF
44. The Greatwall-Endosulfine-PP2A/B55 pathway controls entry into quiescence by promoting translation of Elongator-tuneable transcripts.
- Author
-
Del Dedo JE, Segundo RL, Vázquez-Bolado A, Sun J, García-Blanco N, Suárez MB, García P, Tricquet P, Chen JS, Dedon PC, Gould KL, Hidalgo E, Hermand D, and Moreno S
- Abstract
Quiescent cells require a continuous supply of proteins to maintain protein homeostasis. In fission yeast, entry into quiescence is triggered by nitrogen stress, leading to the inactivation of TORC1 and the activation of TORC2. Here, we report that the Greatwall-Endosulfine-PPA/B55 pathway connects the downregulation of TORC1 with the upregulation of TORC2, resulting in the activation of Elongator-dependent tRNA modifications essential for sustaining the translation programme during entry into quiescence. This process promotes U
34 and A37 tRNA modifications at the anticodon stem loop, enhancing translation efficiency and fidelity of mRNAs enriched for AAA versus AAG lysine codons. Notably, some of these mRNAs encode inhibitors of TORC1, activators of TORC2, tRNA modifiers, and proteins necessary for telomeric and subtelomeric functions. Therefore, we propose a novel mechanism by which cells respond to nitrogen stress at the level of translation, involving a coordinated interplay between the tRNA epitranscriptome and biased codon usage., Competing Interests: Competing interests The authors declare no competing interests.- Published
- 2023
- Full Text
- View/download PDF
45. Characterization of Pik1 function in fission yeast reveals its conserved role in lipid synthesis and not cytokinesis.
- Author
-
Willet AH, Turner LA, Park JS, Ren L, Snider CE, and Gould KL
- Subjects
- Humans, Cytokinesis, Saccharomyces cerevisiae metabolism, Cell Membrane metabolism, Phosphotransferases metabolism, Phosphatidylinositol 4,5-Diphosphate metabolism, Schizosaccharomyces metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Phosphatidylinositol (PI)-4-phosphate (PI4P) is a lipid found at the plasma membrane (PM) and Golgi in cells from yeast to humans. PI4P is generated from PI by PI4-kinases and can be converted into PI-4,5-bisphosphate [PI(4,5)P2]. Schizosaccharomyces pombe have two essential PI4-kinases - Stt4 and Pik1. Stt4 localizes to the PM, and its loss from the PM results in a decrease of PM PI4P and PI(4,5)P2. As a result, cells divide non-medially due to disrupted cytokinetic ring-PM anchoring. However, the localization and function of S. pombe Pik1 has not been thoroughly examined. Here, we found that Pik1 localizes exclusively to the trans-Golgi and is required for Golgi PI4P production. We determined that Ncs1 regulates Pik1, but unlike in other organisms, it is not required for Pik1 Golgi localization. When Pik1 function was disrupted, PM PI4P but not PI(4,5)P2 levels were reduced, a major difference compared with Stt4. We conclude that Stt4 is the chief enzyme responsible for producing the PI4P that generates PI(4,5)P2. Also, that cells with disrupted Pik1 do not divide asymmetrically highlights the specific importance of PM PI(4,5)P2 for cytokinetic ring-PM anchoring., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2023. Published by The Company of Biologists Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
46. Revised fission yeast gene and allele nomenclature guidelines for machine readability.
- Author
-
Lera-Ramírez M, Bähler J, Mata J, Rutherford K, Hoffman CS, Lambert S, Oliferenko S, Martin SG, Gould KL, Du LL, Sabatinos SA, Forsburg SL, Nielsen O, Nurse P, and Wood V
- Subjects
- Humans, Alleles, Comprehension, Databases, Genetic, Phenotype, Schizosaccharomyces genetics
- Abstract
Standardized nomenclature for genes, gene products, and isoforms is crucial to prevent ambiguity and enable clear communication of scientific data, facilitating efficient biocuration and data sharing. Standardized genotype nomenclature, which describes alleles present in a specific strain that differ from those in the wild-type reference strain, is equally essential to maximize research impact and ensure that results linking genotypes to phenotypes are Findable, Accessible, Interoperable, and Reusable (FAIR). In this publication, we extend the fission yeast clade gene nomenclature guidelines to support the curation efforts at PomBase (www.pombase.org), the Schizosaccharomyces pombe Model Organism Database. This update introduces nomenclature guidelines for noncoding RNA genes, following those set forth by the Human Genome Organisation Gene Nomenclature Committee. Additionally, we provide a significant update to the allele and genotype nomenclature guidelines originally published in 1987, to standardize the diverse range of genetic modifications enabled by the fission yeast genetic toolbox. These updated guidelines reflect a community consensus between numerous fission yeast researchers. Adoption of these rules will improve consistency in gene and genotype nomenclature, and facilitate machine-readability and automated entity recognition of fission yeast genes and alleles in publications or datasets. In conclusion, our updated guidelines provide a valuable resource for the fission yeast research community, promoting consistency, clarity, and FAIRness in genetic data sharing and interpretation., Competing Interests: Conflicts of interest statement The author(s) declare no conflict of interest., (© The Author(s) 2023. Published by Oxford University Press on behalf of The Genetics Society of America.)
- Published
- 2023
- Full Text
- View/download PDF
47. From goal to outcome: Analyzing the progression of biomedical sciences PhD careers in a longitudinal study using an expanded taxonomy.
- Author
-
Brown AM, Meyers LC, Varadarajan J, Ward NJ, Cartailler JP, Chalkley RG, Gould KL, and Petrie KA
- Abstract
Biomedical sciences PhDs pursue a wide range of careers inside and outside academia. However, there is little data regarding how career interests of PhD students relate to the decision to pursue postdoctoral training or to their eventual career outcomes. Here, we present the career goals and career outcomes of 1452 biomedical sciences PhDs who graduated from Vanderbilt University between 1997 and 2021. We categorized careers using an expanded three-tiered taxonomy and flags that delineate key career milestones. We also analyzed career goal changes between matriculation and doctoral defense, and the reasons why students became more- or less-interested in research-intensive faculty careers. We linked students' career goal at doctoral defense to whether they did a postdoc, the duration of time between doctoral defense and the first non-training position, the career area of the first non-training position, and the career area of the job at 10 years after graduation. Finally, we followed individual careers for 10 years after graduation to characterize movement between different career areas over time. We found that most students changed their career goal during graduate school, declining numbers of alumni pursued postdoctoral training, many alumni entered first non-training positions in a different career area than their goal at doctoral defense, and the career area of the first non-training position was a good indicator of the job that alumni held 10 years after graduation. Our findings emphasize that students need a wide range of career development opportunities and career mentoring during graduate school to prepare them for futures in research and research-related professions., Competing Interests: The authors declare no conflicts of interest., (©2023 The Authors FASEB BioAdvances published by The Federation of American Societies for Experimental Biology.)
- Published
- 2023
- Full Text
- View/download PDF
48. Elevated levels of sphingolipid MIPC in the plasma membrane disrupt the coordination of cell growth with cell wall formation in fission yeast.
- Author
-
Willet AH, Wos M, Igarashi MG, Ren L, Turner LA, and Gould KL
- Subjects
- Sphingolipids genetics, Sphingolipids metabolism, Saccharomyces cerevisiae genetics, Cell Membrane genetics, Cell Membrane metabolism, Cell Wall genetics, Cell Wall metabolism, Schizosaccharomyces metabolism, Schizosaccharomyces pombe Proteins genetics, Schizosaccharomyces pombe Proteins metabolism
- Abstract
Coupling cell wall expansion with cell growth is a universal challenge faced by walled organisms. Mutations in Schizosaccharomyces pombe css1, which encodes a PM inositol phosphosphingolipid phospholipase C, prevent cell wall expansion but not synthesis of cell wall material. To probe how Css1 modulates cell wall formation we used classical and chemical genetics coupled with quantitative mass spectrometry. We found that elevated levels of the sphingolipid biosynthetic pathway's final product, mannosylinositol phosphorylceramide (MIPC), specifically correlated with the css1-3 phenotype. We also found that an apparent indicator of sphingolipids and a sterol biosensor accumulated at the cytosolic face of the PM at cell tips and the division site of css1-3 cells and, in accord, the PM in css1-3 was less dynamic than in wildtype cells. Interestingly, disrupting the protein glycosylation machinery recapitulated the css1-3 phenotype and led us to investigate Ghs2, a glycosylated PM protein predicted to modify cell wall material. Disrupting Ghs2 function led to aberrant cell wall material accumulation suggesting Ghs2 is dysfunctional in css1-3. We conclude that preventing an excess of MIPC in the S. pombe PM is critical to the function of key PM-localized proteins necessary for coupling growth with cell wall formation., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Willet et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2023
- Full Text
- View/download PDF
49. Membrane binding of endocytic myosin-1s is inhibited by a class of ankyrin repeat proteins.
- Author
-
Willet AH, Chen JS, Ren L, and Gould KL
- Subjects
- Humans, Ankyrin Repeat, Myosins metabolism, Actins metabolism, Cytoskeletal Proteins metabolism, Microfilament Proteins metabolism, Schizosaccharomyces pombe Proteins metabolism, Schizosaccharomyces metabolism
- Abstract
Myosin-1s are monomeric actin-based motors that function at membranes. Myo1 is the single myosin-1 isoform in Schizosaccharomyces pombe that works redundantly with Wsp1-Vrp1 to activate the Arp2/3 complex for endocytosis. Here, we identified Ank1 as an uncharacterized cytoplasmic Myo1 binding partner. We found that in ank1Δ cells, Myo1 dramatically redistributed from endocytic patches to decorate the entire plasma membrane and endocytosis was defective. Biochemical analysis and structural predictions suggested that the Ank1 ankyrin repeats bind the Myo1 lever arm and the Ank1 acidic tail binds the Myo1 TH1 domain to prevent TH1-dependent Myo1 membrane binding. Indeed, Ank1 overexpression precluded Myo1 membrane localization and recombinant Ank1 reduced purified Myo1 liposome binding in vitro. Based on biochemical and cell biological analyses, we propose budding yeast Ank1 and human OSTF1 are functional Ank1 orthologs and that cytoplasmic sequestration by small ankyrin repeat proteins is a conserved mechanism regulating myosin-1s in endocytosis.
- Published
- 2023
- Full Text
- View/download PDF
50. Polarity kinases that phosphorylate F-BAR protein Cdc15 have unique localization patterns during cytokinesis and contributions to preventing tip septation in Schizosaccharomyces pombe .
- Author
-
Igarashi MG, Bhattacharjee R, Willet AH, and Gould KL
- Abstract
The Schizosaccharomyces pombe F-BAR protein, Cdc15, facilitates the linkage between the cytokinetic ring and the plasma membrane. Cdc15 is phosphorylated on many sites by four polarity kinases and this antagonizes membrane interaction. Dephosphorylation of Cdc15 during mitosis induces its phase separation, allowing oligomerization, membrane association, and protein partner binding. Here, using live cell imaging we examined whether spatial separation of Cdc15 from its four identified kinases potentially explains their diverse effects on tip septation and the mitotic Cdc15 phosphorylation state. We identified a correlation between kinase localization and their ability to antagonize Cdc15 cytokinetic ring and membrane localization., Competing Interests: The authors declare that there are no conflicts of interest present., (Copyright: © 2023 by the authors.)
- Published
- 2023
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.