173 results on '"Gokyer A"'
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2. The Role of Strengthening Leadership Behaviour on the Psychological Contract in Primary and Secondary Schools
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Gokyer, Necmi
- Abstract
In the study reported on here we aimed to determine the role of strengthening leadership behaviour on the psychological contract in primary and secondary schools. The population was a total of 7,772 teachers (3,627 primary school teachers and 4,145 middle school teachers) working in the districts of Baglar, Kayapinar, Sur and Yenisehir in Diyarbakir during the 2017-18 academic year. A total of 621 teachers selected by random sampling participated in the study. Data were collected through the following scales developed by Koçak (2016): the School Administrators' Level of Conformity to Psychological Contract Scale and the Teachers' Level of Conformity to Psychological Contract Scale. Teacher perceptions of school managers' demonstration of empowering leadership behaviour were measured with the Reinforcing Leadership Behaviours Scale developed by Konczak, Stelly and Trusty (2000) and adapted to Turkish by Aras (2013). Teacher perceptions of school administrators' levels of compliance with psychological contracts (SACPC) were found to be moderate and teachers' levels of compliance with the psychological contract (ÖPSUD) was high. Teacher perceptions of school administrators in terms of empowering leadership behaviour (ELB) were found to be high.
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- 2020
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3. Phthalates are detected in the follicular fluid of adolescents and oocyte donors with associated changes in the cumulus cell transcriptome
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Gokyer, Dilan, Laws, Mary J., Kleinhans, Anna, Riley, Joan K., Flaws, Jodi A., and Babayev, Elnur
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- 2024
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4. Photodynamic augmentation of oncolytic virus therapy for central nervous system malignancies
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Shimizu, Kazuhide, Kahramanian, Andranik, Jabbar, Muzammil Arif Din Abdul, Turna Demir, Fatma, Gokyer, Dilan, Uthamacumaran, Abicumaran, Rajan, Anant, Saad, Mohammad Ahsan, Gorham, Joshua, Wakimoto, Hiroko, Martuza, Robert L., Rabkin, Samuel D., Hasan, Tayyaba, and Wakimoto, Hiroaki
- Published
- 2023
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5. The Relationship between Teachers' Perceptions of Compliance with the Psychological Contract and School Administrators' Empowering Leadership Behaviors
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Necmi Gokyer, İlkay Okay, Berkan Okay, and Umran Gokyer
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Psychological contract, compliance with psychological contract, employee empowerment, empowering leadership behaviors. ,Theory and practice of education ,LB5-3640 - Abstract
The aim of this study is to examine the effect of school administrators’ empowering leadership behaviors on the psychological contract perceptions of secondary education institution (high school) teachers. The population of the study consists of 2,878 teachers who were working at 47 high schools located in central Elazığ during the 2019-2020 school year. The sample of the study consisted of 470 teachers selected from 12 schools using the stratified sampling method. Data were collected by using the "Scale for School Administrator Compliance with Psychological Contract" developed by Koçak (2016) and the “Scale for Teacher Compliance with Psychological Contract". Teacher perceptions of the level to which school administrators displayed empowering leadership behaviors were measured by using the Empowering Leadership Behaviors Scale developed by Konczak and Stelly and Trusty (2000) and adapted to Turkish by Aras (2013). It was found that teachers had high perceptions of school administrator compliance with psychological contract (SACPC) and that they also had a high level of compliance with psychological contract (STCPC). Additionally, it was found that teacher perceptions of school administrators displaying empowering leadership behaviors (OYGLD) were also high. Perceptions of teachers who had been working for 7-11 years in the same school regarding school administrator compliance with psychological contract were higher than those of teachers who had been working in the same institution for 2-6 years. Moderately positive and significant relationships were found between the Scale for School Administrator Compliance with Psychological Contract (SACPC), the Scale for Teacher Compliance with Psychological Contract (STCPC) and its subdimensions, and the Empowering Leadership Behaviors Scale (ELBS). The variables of deciding on one’s own, knowledge sharing and innovative performance did not have a significant impact.
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- 2023
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6. Relationship between prognostic nutritional index and neutrophil lymphocyte ratio with overall survival in patients with metastatic colorectal cancer receiving regorafenib
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Erdogan, Bulent, Ozcan, Erkan, Gokmen, Ivo, Gokyer, Ali, Kucukarda, Ahmet, Kostek, Osman, Hacıoglu, Muhammet Bekir, Uzunoglu, Sernaz, and Cicin, Irfan
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Lymphocytes -- Health aspects -- Analysis ,Colorectal cancer -- Development and progression -- Drug therapy -- Patient outcomes ,Neutrophils -- Health aspects -- Analysis - Abstract
ABSTRACT Aim: In this study, we aimed to analyze the effect of prognostic nutritional index and neutrophile lymphocyte ratio on the overall survival (OS) in patients treated with regorafenib. Materials and Methods: Metastatic colorectal cancer (CRC) patients who treated with regorafenib between 2016 and 2020 in a single center were evaluated retrospectively. ROC analysis was used for neutrophile lymphocyte ratio (NLR's) and prognostic nutritional index (PNI's) optimum cut-off value. The relationship between OS with PNI and NLR was investigated. Results: Fifty-two patient's data were analyzed. The median age was 57 years, 22 (41.5) of the patients were female. The optimal cut-off value of PNI for OS was 45.7 according to ROC curve analysis. The median NLR value was accepted as 2.7. Median OS was 8.3 months. Patients who have high PNI value than 45.7 had longer OS (12.09 months vs. 6.31 months hazard ratio [HR]: 0.37 95 confidence interval [CI]: 0.19-0.73 P = 0.003) and there was a tendency for longer OS with low NLR value then median (12.05 months vs. 6.14 months HR: 0.54 95 CI: 0.29-1.23 P = 0.057). Primary tumor resected patients had longer OS than nonresected patients (12.05 months vs. 6.30 months HR: 0.34 95 CI: 0.17-0.66 P = 0.001). In multivariate analysis, high PNI value more than 45.7 (HR: 0.40 95 CI: 0.18-0.88 P = 0.02) and resection of the primary tumor (HR: 0.40 95 CI: 0.21-0.80 P = 0.01) were the only independent factors for longer OS. Conclusion: Metastatic CRC patients with high pretreatment PNI and primary tumor resected are more likely to have longer OS with regorafenib. PNI is more reliable index than NLR to predict OS in metastatic CRC patients treated with regorafenib. Keywords: Disease control, neutrophil-lymphocyte ratio, prognostic nutritional index, Author(s): Bulent Erdogan (corresponding author) [1]; Erkan Ozcan [1]; Ivo Gokmen [1]; Ali Gokyer [1]; Ahmet Kucukarda [1]; Osman Kostek [1]; Muhammet Bekir Hacıoglu [1]; Sernaz Uzunoglu [1]; Irfan Cicin [...]
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- 2023
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7. 3D Printing in Shoulder Surgery
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Gokyer, Seyda, Ergene, Emre, Demirak, Onur, Huri, Pinar Yilgor, Huri, Gazi, editor, Özkan, Mustafa, editor, and Bilsel, Kerem, editor
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- 2022
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8. Topology optimization of cylindrical shells with cutouts for maximum buckling strength
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Gokyer, Yusuf and Sonmez, Fazil O.
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- 2023
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9. Phytochemical Evaluation of Ficus Carica Seeds and their Cold Pressed Oil
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Zeliha Ustun-Argon, Zeliha Sari, Ali Gokyer, and Sidika Buyukhelvacigil-Ozturk
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Therapeutics. Pharmacology ,RM1-950 ,Pharmacy and materia medica ,RS1-441 - Abstract
The use of plant materials as the source of oil and functional foods is becoming more important with the new trends and scientific research. In this study, fig (Ficus carica) seed, which is a rarely found, seed and its oil, have been studied to determine the phytochemical properties for possible applications. Fig seeds were obtained from Aydın, Turkey. The oil was extracted by the cold press method. The seeds were analyzed for oil yield, protein, ash, ash insoluble in hydrochloric acid and trace elements. The oil was evaluated for fatty acid, sterol compositions by GC and the volatiles were analyzed with GCMS, tocopherols analyzed by HPLC, total phenolic content and antioxidant activity were determined spectrophotometrically. The oil was also evaluated for free fatty acid (FFA), refractive index (RI), peroxide (PV) and p-anisidine value. The results showed that F. carica has 22.7% oil yield and was characterized by linolenic (41.27%), linoleic (30.06%), and oleic acids (18.10%). Total phenolics were 79.5 mg GAE/100 g, and nine different sterol components were analyzed and β-sitosterol was at the highest rate. Theα-β-γ-δ tocopherol content was 6.088, 0.18, 634, 18 mgkg-1, respectively. Antioxidant capacity was 52.54%. Fenchone, cymene, styrene d-limonene, linalool, camphor were found as important volatiles. Quality parameters were FFA (% oleic acid) 0.90, RI (40 oC) 1.4721, PV (meq O2/kg oil) 2.2, p-anisidine 2.22. As a result, F. carica oil can be an alternative oil source and a good option for functional foods with their rich contentof phytochemicals. For the future, more studies need to be done for both the seeds and the oil for further applications. Keywords Ficus carica seed, cold-pressed oil, fig seed, phytochemical properties
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- 2021
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10. Do live birth rate and obstetric outcomes vary between immediate and delayed embryo transfers following freeze-all cycles?
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Yildiz, Sule, Turkgeldi, Engin, Kalafat, Erkan, Keles, Ipek, Gokyer, Dilan, and Ata, Baris
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- 2021
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11. Phthalates are detected in the follicular fluid of adolescents and oocyte donors with associated changes in the cumulus cell transcriptome
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Gokyer, Dilan, primary, Laws, Mary J., additional, Kleinhans, Anna, additional, Riley, Joan K., additional, Flaws, Jodi A., additional, and Babayev, Elnur, additional
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- 2024
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12. Spatial Growth Factor Delivery for 3D Bioprinting of Vascularized Bone with Adipose-Derived Stem/Stromal Cells as a Single Cell Source
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Goker, Meric, primary, Derici, Utku Serhat, additional, Gokyer, Seyda, additional, Parmaksiz, Mehmet Goktug, additional, Kaya, Burak, additional, Can, Alp, additional, and Yilgor, Pinar, additional
- Published
- 2024
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13. The oocyte microenvironment is altered in adolescents compared to oocyte donors.
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Gokyer, Dilan, Akinboro, Sophia, Zhou, Luhan T, Kleinhans, Anna, Laronda, Monica M, Duncan, Francesca E, Riley, Joan K, Goldman, Kara N, and Babayev, Elnur
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OVUM donation ,INTERLEUKIN-1 ,INDUCED ovulation ,OOCYTE retrieval ,FERTILITY preservation - Abstract
STUDY QUESTION Do the molecular signatures of cumulus cells (CCs) and follicular fluid (FF) of adolescents undergoing fertility preservation differ from that of oocyte donors? SUMMARY ANSWER The microenvironment immediately surrounding the oocyte, including the CCs and FF, is altered in adolescents undergoing fertility preservation compared to oocyte donors. WHAT IS KNOWN ALREADY Adolescents experience a period of subfecundity following menarche. Recent evidence suggests that this may be at least partially due to increased oocyte aneuploidy. Reproductive juvenescence in mammals is associated with suboptimal oocyte quality. STUDY DESIGN, SIZE, DURATION This was a prospective cohort study. Adolescents (10–19 years old, n = 23) and oocyte donors (22–30 years old, n = 31) undergoing ovarian stimulation and oocyte retrieval at a single center between 1 November 2020 and 1 May 2023 were enrolled in this study. PARTICIPANTS/MATERIALS, SETTING, METHODS Patient demographics, ovarian stimulation, and oocyte retrieval outcomes were collected for all participants. The transcriptome of CCs associated with mature oocytes was compared between adolescents (10–19 years old, n = 19) and oocyte donors (22–30 years old, n = 19) using bulk RNA-sequencing. FF cytokine profiles (10–19 years old, n = 18 vs 25–30 years old, n = 16) were compared using cytokine arrays. MAIN RESULTS AND THE ROLE OF CHANCE RNA-seq analysis revealed 581 differentially expressed genes in CCs of adolescents relative to oocyte donors, with 361 genes downregulated and 220 upregulated. Genes enriched in pathways involved in cell cycle and cell division (e.g. GO: 1903047, P = 3.5 × 10
−43 ; GO: 0051983, P = 4.1 × 10−30 ; GO: 0000281, P = 7.7 × 10−15 ; GO: 0044839, P = 5.3 × 10−13 ) were significantly downregulated, while genes enriched in several pathways involved in cellular and vesicle organization (e.g. GO: 0010256, P = 1.2 × 10−8 ; GO: 0051129, P = 6.8 × 10−7 ; GO: 0016050, P = 7.4 × 10−7 ; GO: 0051640, P = 8.1 × 10−7 ) were upregulated in CCs of adolescents compared to oocyte donors. The levels of nine cytokines were significantly increased in FF of adolescents compared to oocyte donors: IL-1 alpha (2-fold), IL-1 beta (1.7-fold), I-309 (2-fold), IL-15 (1.6-fold), TARC (1.9-fold), TPO (2.1-fold), IGFBP-4 (2-fold), IL-12-p40 (1.7-fold), and ENA-78 (1.4-fold). Interestingly, seven of these cytokines have known pro-inflammatory roles. Importantly, neither the CC transcriptomes nor FF cytokine profiles were different in adolescents with or without cancer. LARGE SCALE DATA Original high-throughput sequencing data have been deposited in Gene Expression Omnibus (GEO) database with the accession number GSE265995. LIMITATIONS, REASONS FOR CAUTION This study aims to gain insights into the associated gamete quality by studying the immediate oocyte microenvironment. The direct study of oocytes is more challenging due to sample scarcity, as they are cryopreserved for future use, but would provide a more accurate assessment of oocyte reproductive potential. WIDER IMPLICATIONS OF THE FINDINGS Our findings have implications for the adolescent fertility preservation cycles. Understanding the expected quality of cryopreserved eggs in this age group will lead to better counseling of these patients about their reproductive potential and may help to determine the number of eggs that is recommended to be banked to achieve a reasonable chance of future live birth(s). STUDY FUNDING/COMPETING INTEREST(S) This project was supported by Friends of Prentice organization SP0061324 (M.M.L. and E.B.), Gesualdo Family Foundation (Research Scholar: M.M.L.), and NIH/NICHD K12 HD050121 (E.B.). The authors have declared that no conflict of interest exists. [ABSTRACT FROM AUTHOR]- Published
- 2024
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14. Recycled algae-based carbon materials as electroconductive 3D printed skeletal muscle tissue engineering scaffolds
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Bilge, Selva, Ergene, Emre, Talak, Ebru, Gokyer, Seyda, Donar, Yusuf Osman, Sınağ, Ali, and Yilgor Huri, Pinar
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- 2021
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15. The Relationship between Teachers' Perceptions of Compliance with the Psychological Contract and School Administrators' Empowering Leadership Behaviors
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Gokyer, Necmi, primary, Okay, İlkay, additional, Okay, Berkan, additional, and Gokyer, Umran, additional
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- 2023
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16. Facile modification of polycaprolactone nanofibers with egg white protein
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Renkler, Nergis Zeynep, Ergene, Emre, Gokyer, Seyda, Tuzlakoglu Ozturk, Merve, Yilgor Huri, Pinar, and Tuzlakoglu, Kadriye
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- 2021
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17. Cumulus expansion is impaired with advanced reproductive age due to loss of matrix integrity and reduced hyaluronan
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Babayev, Elnur, primary, Suebthawinkul, Chanakarn, additional, Gokyer, Dilan, additional, Parkes, Wendena S., additional, Rivas, Felipe, additional, Pavone, Mary Ellen, additional, Hall, Adam R., additional, Pritchard, Michele T., additional, and Duncan, Francesca E., additional
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- 2023
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18. FOLLICULAR FLUID OF ADOLESCENTS UNDERGOING FERTILITY PRESERVATION IS MORE PRO-INFLAMMATORY COMPARED TO OOCYTE DONORS
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Akinboro, Sophia Ayomide, primary, Gokyer, Dilan, additional, Kleinhans, Anna, additional, Laronda, Monica M., additional, Duncan, Francesca E., additional, Riley, Joan K., additional, Goldman, Kara N., additional, and Babayev, Elnur, additional
- Published
- 2023
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19. MgCa-Based Alloys Modified with Zn- and Ga-Doped CaP Coatings Lead to Controlled Degradation and Enhanced Bone Formation in a Sheep Cranium Defect Model
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Gokyer, Seyda, Monsef, Yanad Abou, Buyuksungur, Senem, Schmidt, Jurgen, Vladescu Dragomir, Alina, Uygur, Sencer, Oto, Cagdas, Orhan, Kaan, Hasirci, Vasif, Hasirci, Nesrin, and Yilgor, Pinar
- Abstract
Mg-based biodegradable metallic implants are gaining increased attraction for applications in orthopedics and dentistry. However, their current applications are hampered by their high rate of corrosion, degradation, and rapid release of ions and gas bubbles into the physiological medium. The aim of the present study is to investigate the osteogenic and angiogenic potential of coated Mg-based implants in a sheep cranial defect model. Although their osteogenic potential was studied to some extent, their potential to regenerate vascularized bone formation was not studied in detail. We have studied the potential of magnesium–calcium (MgCa)-based alloys modified with zinc (Zn)- or gallium (Ga)-doped calcium phosphate (CaP) coatings as a strategy to control their degradation rate while enhancing bone regeneration capacity. MgCa and its implants with CaP coatings (MgCa/CaP) as undoped or as doped with Zn or Ga (MgCa/CaP + Zn and MgCa/CaP + Ga, respectively) were implanted in bone defects created in the sheep cranium. MgCa implants degraded faster than the others at 4 weeks postop and the weight loss was ca. 50%, while it was ca. 15% for MgCa/CaP and <10% in the presence of Zn and Ga with CaP coating. Scanning electron microscopy (SEM) analysis of the implant surfaces also revealed that the MgCa implants had the largest degree of structural breakdown of all the groups. Radiological evaluation revealed that surface modification with CaP to the MgCa implants induced better bone regeneration within the defects as well as the enhancement of bone–implant surface integration. Bone volume (%) within the defect was ca. 25% in the case of MgCa/CaP + Ga, while it was around 15% for undoped MgCa group upon micro-CT evaluation. This >1.5-fold increase in bone regeneration for MgCa/CaP + Ga implant was also observed in the histopathological examination of the H&E- and Masson’s trichrome-stained sections. Immunohistochemical analysis of the bone regeneration (antiosteopontin) and neovascularization (anti-CD31) at the defect sites revealed >2-fold increase in the expression of the markers in both Ga- and Zn-doped, CaP-coated implants. Zn-doped implants further presented low inflammatory reaction, notable bone regeneration, and neovascularization among all the implant groups. These findings indicated that Ga- and Zn-doped CaP coating is an important strategy to control the degradation rate as well as to achieve enhanced bone regeneration capacity of the implants made of Mg-based alloys.
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- 2024
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20. 3D printed hydrogel scaffold promotes the formation of hormone-active engineered parathyroid tissue
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Gokyurek, Mervesu, primary, Guler, Sumeyra, additional, Gokyer, Seyda, additional, Yazihan, Nuray, additional, Akıncı, Melih, additional, Gülçelik, Mehmet Ali, additional, Yilmaz, Kerim Bora, additional, and Yilgor, Pinar, additional
- Published
- 2023
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21. Earthquake Engineering Experimental Facility for Research and Public Outreach
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Eseller-Bayat, Ece, Gokyer, Seda, Yegian, Mishac K., Ansal, Atilla, Series editor, Ilki, Alper, editor, and Fardis, Michael N., editor
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- 2014
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22. Corrosion Resistance and Cytocompatibility of Magnesium–Calcium Alloys Modified with Zinc- or Gallium-Doped Calcium Phosphate Coatings
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Dilara Goksu Tamay, Seyda Gokyer, Jürgen Schmidt, Alina Vladescu, Pinar Yilgor Huri, Vasif Hasirci, Nesrin Hasirci, and OpenMETU
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Calcium Phosphates ,Cell Survival ,Gallium ,BIOCOMPATIBILITY ,BIODEGRADABLE MAGNESIUM ,Mice ,Coated Materials, Biocompatible ,calcium phosphate coating ,Cell Line, Tumor ,Elastic Modulus ,Absorbable Implants ,Materials Testing ,Alloys ,Animals ,Humans ,VITRO ,Magnesium ,General Materials Science ,biodegradable magnesium implants ,IN-VIVO CORROSION ,MG ,technology, industry, and agriculture ,IMPLANTS ,microarc oxidation ,SUBSTITUTED HYDROXYAPATITE ,Corrosion ,Zinc ,DEGRADATION BEHAVIOR ,Wettability ,SURFACE FREE-ENERGY ,Calcium ,PURE MAGNESIUM - Abstract
In orthopedic surgery, metals are preferred to support or treat damaged bones due to their high mechanical strength. However, the necessity for a second surgery for implant removal after healing creates problems. Therefore, biodegradable metals, especially magnesium (Mg), gained importance, although their extreme susceptibility to galvanic corrosion limits their applications. The focus of this study was to control the corrosion of Mg and enhance its biocompatibility. For this purpose, surfaces of magnesium-calcium (MgCa1) alloys were modified with calcium phosphate (CaP) or CaP doped with zinc (Zn) or gallium (Ga) via MgCa1 microarc oxidation. The effects of surface modifications on physical, chemical, and mechanical properties and corrosion resistance of the alloys were studied using surface profilometry, goniometry, scanning electron microscopy (SEM), energy-dispersive X-ray spectroscopy (EDS), nanoindentation, and electrochemical impedance spectroscopy (EIS). The coating thickness was about 5-8 mu m, with grain sizes of 43.1 nm for CaP coating and 28.2 and 58.1 nm for Zn- and Ga-doped coatings, respectively. According to EIS measurements, the capacitive response (Y-c) decreased from 11.29 to 8.72 and 0.15 Omega(-1) cm(-2) s(n) upon doping with Zn and Ga, respectively. The E-corr value, which was -1933 mV for CaP-coated samples, was found significantly electropositive at -275 mV for Ga-doped ones. All samples were cytocompatible according to indirect tests. In vitro culture with Saos-2 cells led to changes in the surface compositions of the alloys. The numbers of cells attached to the Zn-doped (2.6 x 10(4) cells/cm(2)) and Ga-doped (6.3 x 10(4) cells/cm(2)) coatings were higher than that on the surface of the undoped coating (1.0 x 10(3) cells/cm(2)). Decreased corrosivity and enhanced cell affinity of the modified MgCa alloys (CaP coated and Zn and Ga doped, with Ga-doped ones having the greatest positive effect) make them novel and promising candidates as biodegradable metallic implant materials for the treatment of bone damages and other orthopedic applications.
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- 2021
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23. Investigation of Gas Piston Actuated Opening-Closing Trunk Lid Mechanisms Used in Passenger Cars
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Ahmet YILDIZ, Osman KOPMAZ, and Yusuf GOKYER
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Trunk Lid Mechanisms, Four-Bar Linkage, Gas Piston ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
In this study, the gas piston actuated opening-closing trunk lid mechanisms used in passenger cars are investigated theoretically and experimentally. First, the position analysis of the mechanism which is a four-bar linkage has been carried out. Then the quasi-static analyzes according to the principle of virtual work have been made, and so the hand force, one of the most important parameters in terms of ergonomics, required for opening and closing the trunk lid has been calculated. In order to verify this developed model, the hand force has been determined also experimentally, performing the physical tests on an existing vehicle at Turkish Automobile Factory Inc. (TOFAŞ). Eventually, it is observed that the results obtained from mathematical model and the experimental measurements are compatible each other. This established model will provide convenience for manufacturers to determine the hand force for different model of vehicles.
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- 2015
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24. Binek Araçlarda Kullanılan Gazlı Pistonlu Bagaj Kapağı Açma Kapama Mekanizmalarının İncelenmesi
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Ahmet Yıldız, Osman Kopmaz, and Yusuf Gokyer
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trunk lid mechanisms ,four-bar linkage ,gas piston ,bagaj kapağı mekanizmaları ,dört çubuk ,gazlı piston ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Bu çalışmada binek araçlarda kullanılan gazlı pistonlu bagaj kapağı açma-kapama mekanizmaları teorik ve deneysel olarak incelenmiştir. Öncelikle bir dört çubuk mekanizması olduğu açıkça görülen bu mekanizmanın konum analizi yapılmıştır. Daha sonra virtuel işler ilkesine göre sanki-statik analizler yapılmış ve böylece ergonomi açısından en önemli parametrelerden biri olan kapağı açma ve kapama için gerekli el kuvveti hesaplanmıştır. Kurulan bu modeli doğrulamak için Türk Otomobil Fabrikası A. Ş. (TOFAŞ)’ de mevcut olan bir araç üzerinde fiziksel testler yapılarak el kuvveti deneysel olarak da tespit edilmiştir. Nihayetinde, matematiksel modelden elde edilen sonuçlar ile deneysel ölçümlerden elde edilen sonuçların uyumlu olduğu görülmüştür. Kurulan bu model farklı model araçlar için el kuvvetinin bulunmasında üreticilere kolaylık sağlayacaktır.
- Published
- 2015
25. Topology optimization of cylindrical shells with cutouts for maximum buckling strength
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Yusuf Gokyer and Fazil O. Sonmez
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Mechanical Engineering ,Applied Mathematics ,Automotive Engineering ,General Engineering ,Aerospace Engineering ,Industrial and Manufacturing Engineering - Published
- 2022
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26. Relationship between prognostic nutritional index and neutrophil lymphocyte ratio with overall survival in patients with metastatic colorectal cancer receiving regorafenib
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Bulent Erdogan, Erkan Ozcan, Ivo Gokmen, Ali Gokyer, Ahmet Kucukarda, Osman Kostek, MuhammetBekir Hacioglu, Sernaz Uzunoglu, Irfan Cicin, and Bulent E., Köstek O., Çiçin İ.
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Oncology ,Disease control ,Health Sciences ,Radiology, Nuclear Medicine and imaging ,Klinik Tıp (MED) ,General Medicine ,prognostic nutritional index ,Sağlık Bilimleri ,neutrophil‑lymphocyte ratio ,Clinical Medicine (MED) - Abstract
Aim: In this study, we aimed to analyze the effect of prognostic nutritional index and neutrophile lymphocyte ratio on the overall survival (OS) in patients treated with regorafenib. Materials and Methods: Metastatic colorectal cancer (CRC) patients who treated with regorafenib between 2016 and 2020 in a single center were evaluated retrospectively. ROC analysis was used for neutrophile lymphocyte ratio (NLR’s) and prognostic nutritional index (PNI’s) optimum cut‑off value. The relationship between OS with PNI and NLR was investigated. Results: Fifty‑two patient’s data were analyzed. The median age was 57 years, 22 (41.5%) of the patients were female. The optimal cut‑off value of PNI for OS was 45.7 according to ROC curve analysis. The median NLR value was accepted as 2.7. Median OS was 8.3 months. Patients who have high PNI value than 45.7 had longer OS (12.09 months vs. 6.31 months hazard ratio [HR]: 0.37 95% confidence interval [CI]: 0.19–0.73 P = 0.003) and there was a tendency for longer OS with low NLR value then median (12.05 months vs. 6.14 months HR: 0.54 95% CI: 0.29–1.23 P = 0.057). Primary tumor resected patients had longer OS than nonresected patients (12.05 months vs. 6.30 months HR: 0.34 95% CI: 0.17–0.66 P = 0.001). In multivariate analysis, high PNI value more than 45.7 (HR: 0.40 95% CI: 0.18–0.88 P = 0.02) and resection of the primary tumor (HR: 0.40 95% CI: 0.21–0.80 P = 0.01) were the only independent factors for longer OS. Conclusion: Metastatic CRC patients with high pretreatment PNI and primary tumor resected are more likely to have longer OS with regorafenib. PNI is more reliable index than NLR to predict OS in metastatic CRC patients treated with regorafenib.
- Published
- 2022
27. Topology optimization of cylindrical shells with cutouts for maximum buckling strength
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Gokyer, Yusuf, primary and Sonmez, Fazil O., additional
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- 2022
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28. Societal Implications of Wearable Technology
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Michael, Katina, primary, Gokyer, Deniz, additional, and Abbas, Samer, additional
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- 2018
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29. Non-functional Requirements to Architectural Concerns: ML and NLP at Crossroads.
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Gokhan Gokyer, Semih Cetin, Cevat Sener, and Meltem Turhan Yöndem
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- 2008
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30. Electric Conductivity Probes to Study Change in Degree of Saturation - Bench Top Laboratory Tests
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Kazemiroodsari Hadi, Yegian Mishac K., Alshawabkeh Akram N., and Gokyer Seda
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Environmental sciences ,GE1-350 - Abstract
Sand characteristics such as liquefaction susceptibility can be affected as a result of change in degree of saturation of sand. New liquefaction mitigation technique by inducing partial saturation in sands is introduced by Yegian et al in 2007[1]. This technique requires to monitor changes in degree of saturation of sand. By nature, changes in degree of saturation of sand can lead in changes in its electric conductivity. Electric conductivity is the property of a material that represents its ability to conduct electric current. Fully saturated sand can conduct electric current better than sand with lower degree of saturation. Therefore, the change in measured electric conductivity can be used to calculate the change in degree of saturation of sand. In 1942, Gus Archie [2] expressed that the electric conductivity of soil is a function of its porosity, degree of saturation, tortuosity and electric conductivity of pore fluid. Using Archie’s law electrical conductivity can be related to the degree of saturation in sands. Typically, electric conductivity probes and meters are instruments which are used to measure electric conductivity. Using electrical conductivity probes, sets of bench top tests were conducted on Ottawa sand to study the relation between degree of saturation and electric conductivity in sand. Partial saturation in sands were created by pouring dry sand into sodium percarbonate solution with a known initial concentration. By nature, sodium percarbonate in water, generates oxygen gas bubbles in time. The changes in electric conductivity in the specimen were measured using electric conductivity meters and probes. In addition, changes in degree of saturation of the specimen were measured using soil phase relations equations. Measured electric conductivity data and calculated degree of saturations were correlated to explore relation between electric conductivity and degree of saturation. This paper presents results of bench top tests, and suggests a relationship between, final degree of saturation of sand and initial concentration of sodium percarbonate solution
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- 2020
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31. HOW YOUNG IS TOO YOUNG FOR FERTILITY: TRANSCRIPTOMIC ANALYSIS OF ADOLESCENT CUMULUS CELLS REVEALS DYSREGULATED GENE EXPRESSION COMPARED TO OOCYTE DONORS
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Gokyer, Dilan, Zhou, Tracy Tracy, Kleinhans, Anna, Laronda, Monica M., Duncan, Francesca E., Riley, Joan K., Goldman, Kara N., and Babayev, Elnur
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- 2024
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32. 3D printed hydrogel scaffold promotes the formation of hormone-active engineered parathyroid tissue
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Mervesu Gokyurek, Sumeyra Guler, Seyda Gokyer, Nuray Yazihan, Melih Akıncı, Mehmet Ali Gülçelik, Kerim Bora Yilmaz, and Pinar Yilgor
- Subjects
Biomaterials ,Biomedical Engineering ,Bioengineering - Abstract
The parathyroid glands are localized at the back of the thyroid glands in the cervical region and are responsible for regulation of the calcium level in the blood, through specialized cells that sense Ca2+ and secrete parathyroid hormone (PTH) in response to a decline in its serum level. PTH stimulates the skeleton, kidneys and intestines and controls the level of Ca2+ through specialized activities. Iatrogenic removal of the parathyroid gland, as well as damage to its vascular integrity during cauterization are some of the common complications of thyroid surgery. Therefore, regeneration and/or replacement of malfunctioning parathyroid tissue is required. Tissue engineering is an emerging and promising field for patients with organ failure with recent pioneering clinical applications. The success of tissue engineering strategy depends on the use of proper cells, bioactive factors that stimulate the activities of these cells and scaffolds that are produced to recapitulate the tissue structure and support the function of the engineered tissues. 3D printing is a developing strategy for the production of these scaffolds by providing a delicate control over their structure and properties. In this study, human primary parathyroid cells were successfully isolated and their viability and ability to secrete PTH upon stimulation with different levels of Ca2+ were shown in vitro. These cells were then seeded onto 3D printed alginate scaffolds and 3D bioprinted within alginate bioink, and cell viability as well as the ability to secrete PTH upon stimulation were also demonstrated. Therefore, functional hormone-active parathyroid tissue substitute was engineered in vitro through 3D printed hydrogels and autologous cells.
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- 2023
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33. 3D Printing in Shoulder Surgery
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Seyda Gokyer, Emre Ergene, Onur Demirak, and Pinar Yilgor Huri
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- 2022
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34. Is early change in systemic inflammatory markers associated with treatment response in patients who received pazopanib?
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Bulent, Erdogan, Osman, Kostek, Muhammet, Bekir Hacioglu, Ali, Gokyer, Ahmet, Kucukarda, Erkan, Ozcan, Ivo, Gokmen, Sernaz, Uzunoglu, and Irfan, Cicin
- Subjects
Inflammation ,Male ,Sulfonamides ,Indazoles ,Time Factors ,Sarcoma ,Soft Tissue Neoplasms ,Middle Aged ,Kidney Neoplasms ,Pyrimidines ,Treatment Outcome ,Humans ,Female ,Carcinoma, Renal Cell ,Biomarkers ,Aged ,Neoplasm Staging ,Retrospective Studies - Abstract
To demonstrate whether early changes in systemic inflammatory markers are related with pazopanib treatment response in soft tissue sarcoma and renal cell carcinoma.Forty-one patients with metastatic clear cell renal carcinoma (mRCC) (n=22) and advanced stage soft tissue sarcoma (STS) (n=19) were assessed. Systemic inflammatory markers such as neutrophils, lymphocytes, c-reactive protein (CRP), mean platelet volume (MPV), lactate dehydrogenase (LDH) and neutrophil-lymphocyte ratio (NLR) and platelet-lymphocyte ratio (PLR) at both baseline and 1-month of pazopanib treatment were obtained and their relation with the first radiological response about 3-months later after pazopanib treatment was evaluated.Disease control rate (DCR) at the first initial radiological evaluation was 58.5 % for all, it was 77.3% for the RCC group and 36.8% in the STS group. Serum neutrophil, NLR and CRP levels were significantly decreased from baseline in RCC patients who had DCR with pazopanib treatment. Also, serum CRP levels after pazopanib treatment was significantly lower in RCC patients who had DCR (+) rather than those who progressed.Early decline in serum CRP, neutrophil and NLR levels in RCC patients who received pazopanib at the first month was significantly associated with disease control, assuming a predictive role for the first radiological assessment. However, there was no significant association between change in serum inflammatory marker levels and disease control in STS patients.
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- 2021
35. The association between post-progression survival and clinical characteristics of patients with metastatic colon cancer: A single center experience
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Mehmet, Engin Ozekin, Ali, Gokyer, Ahmet, Kucukarda, Osman, Kostek, Kubilay, Issever, and Bulent, Erdogan
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Male ,Survival Rate ,Disease Progression ,Humans ,Female ,Middle Aged ,Neoplasm Metastasis ,Colorectal Neoplasms ,Aged ,Retrospective Studies - Abstract
In this study, we aimed to determine the factors which affect post-progression survival (PPS) and overall survival (OS) in patients with metastatic colorectal cancer.87 patients with metastatic colorectal cancer had been followed up with palliative care due to disease progression or ECOG performance status after receiving at least two cycles of chemotherapy. PPS was estimated as the time between the last progression date and last control or death date in patients who were followed up with palliative care.87 patients with metastatic colorectal cancer were included in the study. Evaluation with multivariate analysis of factors affecting PPS revealed a significantly longer PPS (10.8 weeks) in patients with ECOG score 0 or 1 than the PPS of patients with ECOG score 2-5 (3 weeks) (p=0.01). It was also found that PPS was 14.4 weeks in patients with CEA levels5ng/ml,while it was 6.7 weeks in patients with CEA levels ≥5 ng/ml (p=0.001) and PPS was 13.7 weeks in patients with controlled disease after first-line chemotherapy while it was 8 weeks in patients with progression (p=0.03); both were statistically significant. No significant association was found between PPS and age, gender, tumor location, sites of metastasis, and RAS status.ECOG performance status score of 0-1, CEA levels below 5 ng/ml, and disease control with first-line chemotherapy are related to longer PPS in patients with metastatic colorectal cancer.
- Published
- 2021
36. The preparation and characterization of Al 2O 3/ZrO 2 nanocrystalline composite by a simple gel method
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Gocmez, H., Fujimori, H., Tuncer, M., Gokyer, Z., and Duran, C.
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- 2010
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37. Relationship between prognostic nutritional index and neutrophil lymphocyte ratio with overall survival in patients with metastatic colorectal cancer receiving regorafenib
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Erdogan, Bulent, primary, Ozcan, Erkan, additional, Gokmen, Ivo, additional, Gokyer, Ali, additional, Kucukarda, Ahmet, additional, Kostek, Osman, additional, Hacioglu, MuhammetBekir, additional, Uzunoglu, Sernaz, additional, and Cicin, Irfan, additional
- Published
- 2022
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38. 3D Printed Biodegradable Polyurethaneurea Elastomer Recapitulates Skeletal Muscle Structure and Function
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Iskender Yilgor, Engin Vrana, Orcun Guvener, Kaan Orhan, Emel Yilgor, Emine Berber, Yanad Abou Monsef, Pinar Yilgor Huri, Çağdaş Oto, Murat Zinnuroğlu, Seyda Gokyer, Biomatériaux et Bioingénierie (BB), Université de Strasbourg (UNISTRA)-Matériaux et nanosciences d'Alsace (FMNGE), and Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)
- Subjects
Scaffold ,Materials science ,[SDV.BIO]Life Sciences [q-bio]/Biotechnology ,Polyurethanes ,Biomedical Engineering ,02 engineering and technology ,Biomaterials ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,Tissue engineering ,medicine ,Myocyte ,Animals ,Muscle, Skeletal ,030304 developmental biology ,0303 health sciences ,Skeletal muscle ,Adhesion ,021001 nanoscience & nanotechnology ,Rats ,medicine.anatomical_structure ,chemistry ,Elastomers ,Polycaprolactone ,Self-healing hydrogels ,Printing, Three-Dimensional ,medicine.symptom ,0210 nano-technology ,Biomedical engineering ,Muscle contraction - Abstract
Effective skeletal muscle tissue engineering relies on control over the scaffold architecture for providing muscle cells with the required directionality, together with a mechanical property match with the surrounding tissue. Although recent advances in 3D printing fulfill the first requirement, the available synthetic polymers either are too rigid or show unfavorable surface and degradation profiles for the latter. In addition, natural polymers that are generally used as hydrogels lack the required mechanical stability to withstand the forces exerted during muscle contraction. Therefore, one of the most important challenges in the 3D printing of soft and elastic tissues such as skeletal muscle is the limitation of the availability of elastic, durable, and biodegradable biomaterials. Herein, we have synthesized novel, biocompatible and biodegradable, elastomeric, segmented polyurethane and polyurethaneurea (TPU) copolymers which are amenable for 3D printing and show high elasticity, low modulus, controlled biodegradability, and improved wettability, compared to conventional polycaprolactone (PCL) and PCL-based TPUs. The degradation profile of the 3D printed TPU scaffold was in line with the potential tissue integration and scaffold replacement process. Even though TPU attracts macrophages in 2D configuration, its 3D printed form showed limited activated macrophage adhesion and induced muscle-like structure formation by C2C12 mouse myoblasts in vitro, while resulting in a significant increase in muscle regeneration in vivo in a tibialis anterior defect in a rat model. Effective muscle regeneration was confirmed with immunohistochemical assessment as well as evaluation of electrical activity produced by regenerated muscle by EMG analysis and its force generation via a custom-made force transducer. Micro-CT evaluation also revealed production of more muscle-like structures in the case of implantation of cell-laden 3D printed scaffolds. These results demonstrate that matching the tissue properties for a given application via use of tailor-made polymers can substantially contribute to the regenerative outcomes of 3D printed tissue engineering scaffolds. Keywords: 3D printing; engineered muscle; polyurethane; polyurethaneurea; skeletal muscle; tibialis anterior defect.
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- 2021
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39. Real-life data on first-line Sunitinib and Pazopanib therapy in metastatic renal cell carcinoma patients: a single center experience
- Author
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Alper, Topal, Sezin, Sayın, Ali, Gokyer, Ahmet, Kucukarda, Osman, Kostek, Muhammet, Bekir Hacıoglu, Sernaz, Uzunoglu, Bulent, Erdogan, and Irfan, Cicin
- Subjects
Adult ,Aged, 80 and over ,Male ,Sulfonamides ,Indazoles ,Angiogenesis Inhibitors ,Antineoplastic Agents ,Middle Aged ,Kidney Neoplasms ,Progression-Free Survival ,Survival Rate ,Pyrimidines ,Treatment Outcome ,Sunitinib ,Humans ,Female ,Carcinoma, Renal Cell ,Aged ,Retrospective Studies - Abstract
In this study, we aimed to compare the data of sunitinib and pazopanib used in the first-line treatment of metastatic renal cell carcinoma (RCC) cases and to evaluate the effective factors in terms of survival.The records of 125 patients with metastatic RCC admitted between January 2005 and February 2018 were retrospectively analyzed and 63 patients who received pazopanib or sunitinib were included in the study while 62 patients were excluded due to insufficient data. Clinical and histological characteristics, treatment responses, progression-free survival (PFS), and overall survival (OS) of the patients were compared.Patients with metastatic RCC who received pazopanib or sunitinib as tyrosine kinase inhibitors (TKI) in first-line treatment were analyzed; 45 (71.4%) were male while 18 (28.6%) were female, and the median age was 60. 43 (68.3%) patients were treated with sunitinib and 20 (31.7%) with pazopanib. PFS of pazopanib and sunitinib were 10.6 and 7.2 months, respectively. Median OS was 14.5 months in patients receiving pazopanib and 13.6 months in those receiving sunitinib. There was no statistical difference in PFS and OS between both treatments. The median OS of clear-cell RCC was 15.2 months, while of non-clear-cell RCC was 7.7months.High ECOG score, non-clear-cell histology, presence of liver metastasis in metastatic RCC patients were found to be associated with shorter OS and PFS. Sunitinib and pazopanib produced similar OS and PFS rates in first-line treatment of metastatic RCC.
- Published
- 2021
40. Corrosion Resistance and Cytocompatibility of Magnesium–Calcium Alloys Modified with Zinc- or Gallium-Doped Calcium Phosphate Coatings
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Tamay, Dilara Goksu, primary, Gokyer, Seyda, additional, Schmidt, Jürgen, additional, Vladescu, Alina, additional, Yilgor Huri, Pinar, additional, Hasirci, Vasif, additional, and Hasirci, Nesrin, additional
- Published
- 2021
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41. OPINIONS OF STUDENTS WHO STAY IN PRIVATE STUDENT RESIDENCES ABOUT ADMINISTRATIVE PROBLEMS (CASE STUDY OF ELAZIĞ)
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Necmi Gokyer
- Subjects
Social sciences (General) ,H1-99 ,business.industry ,Social Sciences ,Sociology ,private student res ,Public relations ,business - Abstract
This study aims to determine opinions of students who stay in private student residences about administrative problems. The study is made using descriptive scanning model and since 5 of the 16 student residences operating in Elazığ in 2011-2012 academic year did not permit questionnaire application, population of the study is composed of 1200 students staying in the remaining 11 student residences in Elazığ. Sample of the study is composed of 498 students chosen with simple random sampling method from among students staying in the said 11 residences. For collection of data, a questionnaire titled "opinions of students staying in private student residences about administrative problems" was used which was developed by the researcher. With the data obtained, arithmetic average, standard deviation, t test, one way analysis of variance were made. According to findings of the research 47.2% of the students find food prices high. Officers working in the residences are behaving towards students respectfully in general. Administrators are dealing with students very much at sometimes level. Sufficient education environment for studying according to student number can sometimes be found.
- Published
- 2019
42. THE EFFECTIVENESS OF GUIDANCE SERVICES’ IMPLEMENTATION PROCESS IN PRIMARY SCHOOLS
- Author
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Necmi Gokyer
- Subjects
H1-99 ,Primary (chemistry) ,Process management ,Multimedia ,Process (engineering) ,Computer science ,education ,Social Sciences ,computer.software_genre ,behavioral disciplines and activities ,Social sciences (General) ,school gu ,computer - Abstract
The aim of this study is to determine the perceptions of school administrators and guidance teachers on the effectiveness of implementation process of guidance and psychological counselling services at primary schools. Through a survey method 56 principals, 110 vice-principals and 56 guidance teachers at 56 public schools in central town of Elazığ during the academic year of 2010-2011. The number of total participants taking part in the research is 138. The results show that the perception levels of female administrators and guidance teachers are higher than male administrators and guidance teachers on the effectiveness of implementation process of guidance and psychological counselling. On the other hand, the perception levels of administrators and guidance teachers having 1-5 years of service group are higher than those having 11-15, 16-20, and 21 and over years of service groups in respect of the effectiveness of the implementation process of guidance and psychological counselling.
- Published
- 2019
43. Prognostic Effect of Immunohistochemical Scoring on Survival in Glioblastoma.
- Author
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Kucukarda, Ahmet, Gokyer, Ali, Caloglu, Vuslat Yurut, Caloglu, Hasan Murat, Gokmen, Ivo, Ozcan, Erkan, Hacioglu, Muhammet Bekir, Erdogan, Bulent, and Uzunoglu, Sernaz
- Subjects
IMMUNOCHEMISTRY ,BIOMARKERS ,CONFIDENCE intervals ,RESEARCH methodology ,CROSS-sectional method ,MULTIVARIATE analysis ,GLIOMAS ,RETROSPECTIVE studies ,KARNOFSKY Performance Status - Abstract
Objectives: We aimed to show whether the scoring system we developed using IDH, p53 and Ki-67 markers has a prognostic feature on survival in glioblastoma. Methods: Retrospective screening was conducted on 109 patients who were followed up in our clinic. IHC scoring was performed from pathology reports. Results: Fifty-five patients (50.5%) were IDH Wild, 44 (40.4%) of them were p53 mutant, and 51 (46.8%) of them were Ki-67 >30 status. Median PFS was 6.2 months (95% CI: 5.7-6.8 months), and median OS was 10.1 months (95% CI: 7.6-12.5 months). In multivariate analysis p53 status was independent prognostic factor for both PFS and OS [(HR: 2.03 (1.14-3.61), p=0.02) and (HR: 1.86 (1.03-3.36), p=0.04), respectively]. However, Ki-67 status was an independent prognostic factor for only OS [HR: 1.94 (1.02-3.69), p=0.04]. When the patients were examined by dividing them into four IHC score groups for the combined prognostic value of IDH, p53, and Ki-67 status; differences between group 0 and the others were statistically significant. Conclusion: This study demonstrated that p53 and Ki-67 are useful, independent prognostic markers for GBM patients. Furthermore, the combined use of these three IHC markers is a statistically significant indicator for PFS and OS. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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44. The relation between tissue galectin-3 level and platinum resistance in neoadjuvant bladder cancer treatment
- Author
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Ali, Gokyer, Ahmet, Kucukarda, Osman, Kostek, Sezin, Sayin, Nuray, Can, Bekir, Hacıoglu, Bulent, Erdogan, Sernaz, Uzunoglu, and Irfan, Cicin
- Subjects
Male ,Urinary Bladder Neoplasms ,Drug Resistance, Neoplasm ,Galectin 3 ,Humans ,Female ,Middle Aged ,Neoadjuvant Therapy ,Aged - Abstract
This study aimed to reveal the relationship between the level of galectin-3 expression and the depth of response to neoadjuvant therapy in bladder tumor tissue with muscle invasion revealed by transurethral biopsy.The percentage of galectin-3 staining in transurethral biopsy tissue with muscle invasion was determined by immunohistochemistry. The patients were divided into two groups: the down-staging (+) group consisting of patients with pathological complete response or non-invasive bladder cancer, and the down-staging (-) group consisting of patients with stage 2 and above.There were 11 patients in the down-staging (+) group and 12 patients in the down-staging (-) group. There was no significant difference between the two groups in terms of median age, gender, smoking, clinical stage at the time of diagnosis, distribution of carboplatin or cisplatin used as a platinum agent. Galectin-3 was positive in 2 patients (18.2%) in the group where down-staging was achieved with neoadjuvant therapy, while it was positive in 9 patients (75%) in the other group (p = 0.01). The median follow-up period of the patients was 31.6 months (95% CI 25.1-39.3). Overall survival was 43.4 months in the down-staging (+) group (95% CI 25.1-61.6) and 31.6 months in the down-staging (-) group (95% CI 12.7-50.6). Although there was a numerical difference, it did not reach statistical significance (p=0.37).The rate of down-staging after platinum-based neoadjuvant chemotherapy is significantly higher in patients with low galectin-3 staining in transurethral bladder biopsy tissue.
- Published
- 2021
45. Skeletal muscle loss during anti-epidermal growth factor receptor therapy is an independent prognostic factor on non-small cell lung cancer patients survival
- Author
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Ahmet, Kucukarda, Ali, Gokyer, Ivo, Gokmen, Muhammed, Bekir Hacioglu, Osman, Kostek, Nazmi, Kurt, Derya, Karabulut, Nermin, Tuncbilek, Sernaz, Uzunoglu, Bulent, Erdogan, and Irfan, Cicin
- Subjects
Male ,Lung Neoplasms ,Gefitinib ,Middle Aged ,Afatinib ,Prognosis ,Progression-Free Survival ,ErbB Receptors ,Survival Rate ,Erlotinib Hydrochloride ,Muscular Diseases ,Carcinoma, Non-Small-Cell Lung ,Humans ,Female ,Protein Kinase Inhibitors ,Aged ,Retrospective Studies - Abstract
We aimed to assess whether skeletal muscle loss during EGFR thyrosine kinase inhibitor therapy of advance non-small cell lung cancer patients is an independent prognostic factor for progression-free survival (PFS) and overal survival (OS).A total of 45 patients who had computed tomography images were retrospectively evaluated at the diagnosis and during the treatment period before progression occurs.During treatment 19 patients (42.2%) had skeletal muscle loss. Objective response rates in muscle loss group and muscle stable group were 36.8% and 73.0%, respectively (p0.01). Median follow-up time was 18.9 months (14.8-32.1). Median PFS was 14.7 months (95% CI 12.1-17.3) in muscle stable group and 7.6 months (95% CI 6.7-8.5) in muscle loss group (p0.01). Median OS was 18.3 months (95% CI 16.5-20.2) in muscle loss group while it was 30.1 months (95% CI 22.1-38.2) in muscle stable group (p0.01). In multivariate analysis for both PFS and OS, skeletal muscle loss was an independent prognostic factor. Hazard ratios (HR) for PFS and OS were 12.2 (95% CI 4.3-34.4) and 3.51 (95% CI 1.41-8.73) respectively.On CT imaging skeletal muscle loss before progression is an independent prognostic factor for both PFS and OS in advance non-small cell lung cancer patients who received EGFR tyrosine kinase inhibitor therapy.
- Published
- 2021
46. Are live birth rate and obstetric outcomes different between immediate and delayed embryo transfers following a freeze-all cycle? A retrospective study combined with a meta-analysis
- Author
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Yildiz, S., Turkgeldi, E., Kalafat, Erkan, Gokyer, D., Keles, I., Ata, B., and OpenMETU
- Published
- 2021
47. P–692 Are live birth rate and obstetric outcomes different between immediate and delayed embryo transfers following a freeze-all cycle? A retrospective study combined with a meta-analysis
- Author
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Ipek Keles, Engin Turkgeldi, Baris Ata, Erkan Kalafat, D Gokyer, and Sule Yildiz
- Subjects
medicine.medical_specialty ,Freeze all ,Reproductive Medicine ,Obstetrics ,business.industry ,Meta-analysis ,Rehabilitation ,medicine ,Obstetrics and Gynecology ,Embryo ,Retrospective cohort study ,Live birth ,business - Abstract
Study question Do livebirth rate (LBR), obstetric and perinatal outcomes vary between frozen embryo transfers (FET) in the first or subsequent menstrual cycles following a freeze-all approach? Summary answer Immediate FET has a higher LBR and similar perinatal outcomes than delayed FET. Quantitative synthesis of available literature shows an increased LBR with immediate transfer. What is known already Whether FET should be done in the first menstrual cycle following oocyte collection (OC) is controversial and the duration of a possible detrimental effect of supraphysiological sex steroid levels on pregnancy outcome is unknown. A multinational survey centers showed that, 61% of clinicians prefer to wait for a washout period before proceeding to FET, even after a failed fresh embryo transfer. Limited number of studies compared FET in the first menstrual cycle with delayed FET in a subsequent cycle with varying results. There is limited data on obstetric outcomes of pregnancies resulting from FET in the first menstrual cycle. Study design, size, duration 198 women who underwent a freeze-all cycle followed by FET between July 2017 and June 2020 were included. 119 FET in the first menstrual cycle (30 days from oocyte collection) were retrospectively compared. MEDLINE was searched on 01 January 2021 using relevant keywords. Cohort studies comparing immediate versus delayed transfer following freeze all cycles were included and quantitative summary for LBR was obtained. Participants/materials, setting, methods Freeze-all was undertaken when (i) the woman is deemed to be at high risk for OHSS, (ii)serum progesterone level is > 1.5 ng/ml on the day of trigger, (iii)preimplantation genetic testing is planned, (iv)the woman will undergo surgery prior to ET, (v)couple preference. Main results and the role of chance Baseline characteristics were similar between the groups except for antral follicle count (22 vs 18, MD = 5, 95% CI = 0 to 8), and number of metaphase-two oocytes (13 vs 10, MD = 3, 95% CI = 1 to 6) all of which were significantly higher in the immediate transfer group. Clinical pregnancy rate (CPR) per ET was similar in two groups (50.4% vs 44.3%, RR = 1.14, 95% CI = 0.84 to 1.54). Miscarriage rate per pregnancy was significantly lower (12.3 vs 31.1, RR = 0.40, 95% CI = 0.19 to 0.84) and LBR per ET was significantly higher (42.9 vs 26.6, RR = 1.61, 95% CI = 1.06 to 2.46) in the immediate transfer group. Median gestational age at delivery was similar (267.5 (262.5–273) vs 268 (260–271.5) days, MD = 1.00, 95% CI= –4.00 to 5.00). Median birthweight was significantly higher in the delayed transfer group (3520 vs 3195 grams, MD= –300, 95% CI= –660 to –20 grams). Birthweight percentile, height at birth and head circumference were similar between groups. Literature search revealed 1712 studies from which nine were eligible for quantitative summary. Cumulative risk ratio showed a 10% increase in LBR with immediate transfer compared to delayed transfer (RR = 1.10, 95% CI = 1.01 – 1.20, I2=67%, 17369 embryo transfers). Limitations, reasons for caution Our study is limited by its retrospective design and relatively limited sample size for multivariate analyses. Yet, it is reassuring that the majority of our findings are consistent with previous publications. Wider implications of the findings: The hypotheses generated by our retrospective findings, i.e., FET in the immediate menstrual cycle resembling fresh ETs with strong trends towards lower birthweight and lower incidence of preeclampsia is noteworthy for the design of future studies, and these outcomes should be followed and reported. Trial registration number None
- Published
- 2021
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48. Recycled algae-based carbon materials as electroconductive 3D printed skeletal muscle tissue engineering scaffolds
- Author
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Ebru Talak, Yusuf Osman Donar, Pinar Yilgor Huri, Emre Ergene, Selva Bilge, Ali Sınağ, and Seyda Gokyer
- Subjects
Materials science ,Polyesters ,Tissue Engineering Constructs and Cell Substrates ,Biomedical Engineering ,Biophysics ,Nanofibers ,Bioengineering ,Carbon nanotube ,Matrix (biology) ,Spectrum Analysis, Raman ,Catalysis ,law.invention ,Cell Line ,Biomaterials ,Myoblasts ,Hydrothermal carbonization ,Mice ,law ,medicine ,Electrochemistry ,Myocyte ,Animals ,Regeneration ,Biomass ,Muscle, Skeletal ,Tissue Engineering ,Tissue Scaffolds ,Nanotubes, Carbon ,Regeneration (biology) ,Electric Conductivity ,Skeletal muscle ,Seaweed ,Carbon ,medicine.anatomical_structure ,Chemical engineering ,Printing, Three-Dimensional ,Stress, Mechanical ,Myofibril ,C2C12 - Abstract
Skeletal muscle is an electrically and mechanically active tissue that contains highly oriented, densely packed myofibrils. The tissue has self-regeneration capacity upon injury, which is limited in the cases of volumetric muscle loss. Several regenerative therapies have been developed in order to enhance this capacity, as well as to structurally and mechanically support the defect site during regeneration. Among them, biomimetic approaches that recapitulate the native microenvironment of the tissue in terms of parallel-aligned structure and biophysical signals were shown to be effective. In this study, we have developed 3D printed aligned and electrically active scaffolds in which the electrical conductivity was provided by carbonaceous material (CM) derived from algae-based biomass. The synthesis of this conductive and functional CM consisted of eco-friendly synthesis procedure such as pre-carbonization and multi-walled carbon nanotube (MWCNT) catalysis. CM obtained from biomass via hydrothermal carbonization (CM-03) and its ash form (CM-03K) were doped within poly(ɛ-caprolactone) (PCL) matrix and 3D printed to form scaffolds with aligned fibers for structural biomimicry. Scaffolds were seeded with C2C12 mouse myoblasts and subjected to electrical stimulation during the in vitro culture. Enhanced myotube formation was observed in electroactive groups compared to their non-conductive counterparts and it was observed that myotube formation and myotube maturity were significantly increased for CM-03 group after electrical stimulation. The results have therefore showed that the CM obtained from macroalgae biomass is a promising novel source for the production of the electrically conductive scaffolds for skeletal muscle tissue engineering.
- Published
- 2021
49. Numerical simulation of partial saturation in sands induced by flow and chemical reactivity
- Author
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Seda Gokyer
- Published
- 2021
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50. Inducing and imaging partial degree of saturation in laboratory sand specimens
- Author
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Seda Gokyer
- Published
- 2021
- Full Text
- View/download PDF
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