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303 results on '"Godsoe, William"'

4. The generalized Price equation: forces that change population statistics

Author

Frank, Steven A. and Godsoe, William

Subjects
Quantitative Biology - Populations and Evolution
Abstract

The Price equation partitions the change in the expected value of a population measure. The first component describes the partial change caused by altered frequencies. The second component describes the partial change caused by altered measurements. In biology, frequency changes often associate with the direct effect of natural selection. Measure changes reflect processes during transmission that alter trait values. More broadly, the two components describe the direct forces that change population composition and the altered frame of reference that changes measured values. The classic Price equation is limited to population statistics that can expressed as the expected value of a measure. Many statistics cannot be expressed as expected values, such as the harmonic mean and the family of rescaled diversity measures. We generalize the Price equation to any population statistic that can be expressed as a function of frequencies and measurements. We obtain the generalized partition between the direct forces that cause frequency change and the altered frame of reference that changes measurements.

Published
2020

7. The Generalized Price Equation: Forces That Change Population Statistics

Author

Frank, Steven A and Godsoe, William

Subjects
Biological Sciences, Ecology, Evolutionary Biology, Clinical Research, evolutionary theory, diversity indices, population dynamics, generalized mean, population statistics, q-bio.PE, Evolutionary biology, Ecological applications
Abstract

The Price equation partitions the change in the expected value of a population measure. The first component describes the partial change caused by altered frequencies. The second component describes the partial change caused by altered measurements. In biology, frequency changes often associate with the direct effect of natural selection. Measure changes reflect processes during transmission that alter trait values. More broadly, the two components describe the direct forces that change population composition and the altered frame of reference that changes measured values. The classic Price equation is limited to population statistics that can be expressed as the expected value of a measure. Many statistics cannot be expressed as expected values, such as the harmonic mean and the family of rescaled diversity measures. We generalize the Price equation to any population statistic that can be expressed as a function of frequencies and measurements. We obtain the generalized partition between the direct forces that cause frequency change and the altered frame of reference that changes measurements.

Published
2020

9. A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels

Author

Norberg, Anna, Abrego, Nerea, Blanchet, F Guillaume, Adler, Frederick R, Anderson, Barbara J, Anttila, Jani, Araujo, Miguel B, Dallas, Tad, Dunson, David, Elith, Jane, Foster, Scott D, Fox, Richard, Franklin, Janet, Godsoe, William, Guisan, Antoine, O'Hara, Bob, Hill, Nicole A, Holt, Robert D, Hui, Francis KC, Husby, Magne, Kalas, John Atle, Lehikoinen, Aleksi, Luoto, Miska, Mod, Heidi K, Newell, Graeme, Renner, Ian, Roslin, Tomas, Soininen, Janne, Thuiller, Wilfried, Vanhatalo, Jarno, Warton, David, White, Matt, Zimmermann, Niklaus E, Gravel, Dominique, and Ovaskainen, Otso

Subjects
community assembly, community modeling, environmental filtering, joint species distribution model, model performance, prediction, predictive power, species interactions, stacked species distribution model, Physical Geography and Environmental Geoscience, Ecological Applications, Ecology
Published
2019

13. Interspecific interactions and range limits: contrasts among interaction types

Author

Godsoe, William, Holland, Nathaniel J, Cosner, Chris, Kendall, Bruce E, Brett, Angela, Jankowski, Jill, and Holt, Robert D

Subjects
Species' distributions, Biotic interactions, Range limits, Mutualism, Competition, Stress gradient hypothesis, Ecology
Abstract

There is a great deal of interest in the effects of biotic interactions on geographic distributions. Nature contains many different types of biotic interactions (notably mutualism, commensalism, predation, amensalism, and competition), and it is difficult to compare the effects of multiple interaction types on species’ distributions. To resolve this problem, we analyze a general, flexible model of pairwise biotic interactions that can describe all interaction types. In the absence of strong positive feedback, a species’ ability to be present depends on its ability to increase in numbers when it is rare and the species it is interacting with is at equilibrium. This insight leads to counterintuitive conclusions. Notably, we often predict the same range limit when the focal species experiences competition, predation, or amensalism. Similarly, we often predict the same range margin or when the species experiences mutualism, commensalism, or benefits from prey. In the presence of strong positive density-dependent feedback, different species interactions produce different range limits in our model. In all cases, the abiotic environment can indirectly influence the impact of biotic interactions on range limits. We illustrate the implications of this observation by analyzing a stress gradient where biotic interactions are harmful in benign environments but beneficial in stressful environments. Our results emphasize the need to consider the effects of all biotic interactions on species’ range limits and provide a systematic comparison of when biotic interactions affect distributions.

Published
2017

14. Effects of biotic interactions on modeled species' distribution can be masked by environmental gradients

Author

Godsoe, William, Franklin, Janet, and Blanchet, F Guillaume

Subjects
competition, dispersal, ecological niche, priority effect, range limits, species' distribution model, Ecology, Evolutionary Biology
Abstract

A fundamental goal of ecology is to understand the determinants of species' distributions (i.e., the set of locations where a species is present). Competition among species (i.e., interactions among species that harms each of the species involved) is common in nature and it would be tremendously useful to quantify its effects on species' distributions. An approach to studying the large-scale effects of competition or other biotic interactions is to fit species' distributions models (SDMs) and assess the effect of competitors on the distribution and abundance of the species of interest. It is often difficult to validate the accuracy of this approach with available data. Here, we simulate virtual species that experience competition. In these simulated datasets, we can unambiguously identify the effects that competition has on a species' distribution. We then fit SDMs to the simulated datasets and test whether we can use the outputs of the SDMs to infer the true effect of competition in each simulated dataset. In our simulations, the abiotic environment influenced the effects of competition. Thus, our SDMs often inferred that the abiotic environment was a strong predictor of species abundance, even when the species' distribution was strongly affected by competition. The severity of this problem depended on whether the competitor excluded the focal species from highly suitable sites or marginally suitable sites. Our results highlight how correlations between biotic interactions and the abiotic environment make it difficult to infer the effects of competition using SDMs.

Published
2017

15. Climate change impacts on Aotearoa New Zealand: a horizon scan approach.

Author

Macinnis-Ng, Cate, Ziedins, Ilze, Ajmal, Hamza, Baisden, W. Troy, Hendy, Shaun, McDonald, Adrian, Priestley, Rebecca, Salmon, Rhian A., Sharp, Emma L., Tonkin, Jonathan D., Velarde, Sandra, Watene, Krushil, and Godsoe, William

Subjects
CLIMATE sensitivity, ECONOMIC change, CLIMATE change, GEOGRAPHY
Abstract

Many of the implications of climate change for Aotearoa (New Zealand) remain unclear. To identify so-far unseen or understudied threats and opportunities related to climate change we applied a horizon-scanning process. First, we collated 171 threats and opportunities across our diverse fields of research. We then scored each item for novelty and potential impact and finally reduced the list to ten threats and ten opportunities through a prioritisation process. Within the 20 items presented in this paper, we uncover a range of climate-related costs and benefits. Unexpected opportunities evolve from economic reorganisation and changes to perspectives. The threats we highlight include the overall failure to interconnect siloed policy responses, as well as those relating to extreme events and feedbacks, as well as pressures that undermine the coherence of society. A major theme of our work is that climate change effects in Aotearoa are likely to transgress the boundaries of research disciplines, industry sectors and policy systems, emphasising the importance of developing transdisciplinary methods and approaches. We use this insight to connect potential responses to climate change with Aotearoa's culture and geography. [ABSTRACT FROM AUTHOR]

Published
2024
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21. Climate change impacts on Aotearoa New Zealand: a horizon scan approach

Author

Macinnis-Ng, Cate, primary, Ziedins, Ilze, additional, Ajmal, Hamza, additional, Baisden, W. Troy, additional, Hendy, Shaun, additional, McDonald, Adrian, additional, Priestley, Rebecca, additional, Salmon, Rhian A., additional, Sharp, Emma L., additional, Tonkin, Jonathan D., additional, Velarde, Sandra, additional, Watene (Ngāti Manu, Te Hikutu, Ngāti Whātua Ōrākei, Tonga), Krushil, additional, and Godsoe, William, additional

Published
2023
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30. A multilevel mechanistic model of diversity change

Author

Godsoe, William, primary, Allen, Warwick, additional, Waller, Lauren, additional, Barratt, Barbara, additional, Flanagan, Sarah, additional, Marion, Zachary, additional, Tylianakis, Jason, additional, Moltchanova, Elena, additional, and Dickie, Ian, additional

Published
2023
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32. The Effects of Predatory Bug, Engytatus Nicotianae and Trichoderma and Their Interaction in Supressing the Tomato Potato Psyllid, (Tpp) Bactericera Cockerelli in Greenhouse Grown Tomatoes

Author

Veronesi, Emiliano Rinaldo, primary, Goldson, Stephen L., additional, Cairns, Sarah M., additional, Alizadeh, Hossein, additional, Hampton, John, additional, Maris, Robbie, additional, Godsoe, William A., additional, and Clavijo-McCormick, Andrea, additional

Published
2023
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38. What is the price of using the Price equation in ecology?

Author

Bourrat, Pierrick, Godsoe, William, Pillai, Pradeep, Gouhier, Tarik C., Ulrich, Werner, Gotelli, Nicholas J., and van Veelen, Matthijs

Subjects
*PRICES, *CRITICAL thinking, *EQUATIONS, *SCIENTIFIC community, *GENE frequency
Abstract

The Dialogue series is intended to promote critical thinking and the expression of contrasting or even opposing viewpoints on important ecological topics. Here, seven researchers debate the use of the Price equation, a framework that has long been used in evolution to analyze temporal changes in the frequency of traits and alleles. This Dialogue describes different philosophical and mathematical perspectives on the application of the Price equation to ecological questions such as the relationship between biodiversity and ecosystem functioning (BEF). The hope is that the broader scientific community will benefit from these contrasting viewpoints. [ABSTRACT FROM AUTHOR]

Published
2023
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41. Global urban environmental change drives adaptation in white clover

Author

Santangelo, James S., Ness, Rob W., Cohan, Beata, Fitzpatrick, Connor R., Innes, Simon G., Koch, Sophie, Miles, Lindsay S., Munim, Samreen, Peres-Neto, Pedro R., Prashad, Cindy, Tong, Alex T., Aguirre, Windsor E., Akinwole, Philips O., Alberti, Marina, Alvarez, Jackie, Anderson, Jill T., Anderson, Joseph J., Ando, Yoshino, Andrew, Nigel R., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Aoki-Goncalves, Felipe, Arietta, A. Z. Andis, Arroyo, Mary T. K., Austen, Emily J., Baena-Diaz, Fernanda, Barker, Cory A., Baylis, Howard A., Beliz, Julia M., Benitez-Mora, Alfonso, Bickford, David, Biedebach, Gabriela, Blackburn, Gwylim S., Boehm, Mannfred M. A., Bonser, Stephen P., Bonte, Dries, Bragger, Jesse R., Branquinho, Cristina, Brans, Kristien, I, Bresciano, Jorge C., Brom, Peta D., Bucharova, Anna, Burt, Briana, Cahill, James F., Campbell, Katelyn D., Carlen, Elizabeth J., Carmona, Diego, Castellanos, Maria Clara, Centenaro, Giada, Chalen, Izan, Chaves, Jaime A., Chavez-Pesqueira, Mariana, Chen, Xiao-Yong, Chilton, Angela M., Chomiak, Kristina M., Cisneros-Heredia, Diego F., Cisse, Ibrahim K., Classen, Aimee T., Comerford, Mattheau S., Fradinger, Camila Cordoba, Corney, Hannah, Crawford, Andrew J., Crawford, Kerri M., Dahirel, Maxime, David, Santiago, De Haan, Robert, Deacon, Nicholas J., Dean, Clare, Del-Val, Ek, Deligiannis, Eleftherios K., Denney, Derek, Dettlaff, Margarete A., DiLeo, Michelle F., Ding, Yuan-Yuan, Dominguez-Lopez, Moises E., Dominoni, Davide M., Draud, Savannah L., Dyson, Karen, Ellers, Jacintha, Espinosa, Carlos, I, Essi, Liliana, Falahati-Anbaran, Mohsen, Falcao, Jessica C. F., Fargo, Hayden T., Fellowes, Mark D. E., Fitzpatrick, Raina M., Flaherty, Leah E., Flood, Padraic J., Flores, Maria F., Fornoni, Juan, Foster, Amy G., Frost, Christopher J., Fuentes, Tracy L., Fulkerson, Justin R., Gagnon, Edeline, Garbsch, Frauke, Garroway, Colin J., Gerstein, Aleeza C., Giasson, Mischa M., Girdler, E. Binney, Gkelis, Spyros, Godsoe, William, Golemiec, Anneke M., Golemiec, Mireille, Gonzalez-Lagos, Cesar, Gorton, Amanda J., Gotanda, Kiyoko M., Granath, Gustaf, Greiner, Stephan, Griffiths, Joanna S., Grilo, Filipa, Gundel, Pedro E., Hamilton, Benjamin, Hardin, Joyce M., He, Tianhua, Heard, Stephen B., Henriques, Andre F., Hernandez-Poveda, Melissa, Hetherington-Rauth, Molly C., Hill, Sarah J., Hochuli, Dieter F., Hodgins, Kathryn A., Hood, Glen R., Hopkins, Gareth R., Hovanes, Katherine A., Howard, Ava R., Hubbard, Sierra C., Ibarra-Cerdena, Carlos N., Iniguez-Armijos, Carlos, Jara-Arancio, Paola, Jarrett, Benjamin J. M., Jeannot, Manon, Jimenez-Lobato, Vania, Johnson, Mae, Johnson, Oscar, Johnson, Philip P., Johnson, Reagan, Josephson, Matthew P., Jung, Meen Chel, Just, Michael G., Kahilainen, Aapo, Kailing, Otto S., Karinho-Betancourt, Eunice, Karousou, Regina, Kirn, Lauren A., Kirschbaum, Anna, Laine, Anna-Liisa, LaMontagne, Jalene M., Lampei, Christian, Lara, Carlos, Larson, Erica L., Lazaro-Lobo, Adrian, Le, Jennifer H., Leandro, Deleon S., Lee, Christopher, Lei, Yunting, Leon, Carolina A., Tamara, Manuel E. Lequerica, Levesque, Danica C., Liao, Wan-Jin, Ljubotina, Megan, Locke, Hannah, Lockett, Martin T., Longo, Tiffany C., Lundholm, Jeremy T., MacGillavry, Thomas, Mackin, Christopher R., Mahmoud, Alex R., Manju, Isaac A., Marien, Janine, Martinez, D. Nayeli, Martinez-Bartolome, Marina, Meineke, Emily K., Mendoza-Arroyo, Wendy, Merritt, Thomas J. S., Merritt, Lila Elizabeth L., Migiani, Giuditta, Minor, Emily S., Mitchell, Nora, Bazargani, Mitra Mohammadi, Moles, Angela T., Monk, Julia D., Moore, Christopher M., Morales-Morales, Paula A., Moyers, Brook T., Munoz-Rojas, Miriam, Munshi-South, Jason, Murphy, Shannon M., Murua, Maureen M., Neila, Melisa, Nikolaidis, Ourania, Njunji, Iva, Nosko, Peter, Nunez-Farfan, Juan, Ohgushi, Takayuki, Olsen, Kenneth M., Opedal, Oystein H., Ornelas, Cristina, Parachnowitsch, Amy L., Paratore, Aaron S., Parody-Merino, Angela M., Paule, Juraj, Paulo, Octavio S., Pena, Joao Carlos, Pfeiffer, Vera W., Pinho, Pedro, Piot, Anthony, Porth, Ilga M., Poulos, Nicholas, Puentes, Adriana, Qu, Jiao, Quintero-Vallejo, Estela, Raciti, Steve M., Raeymaekers, Joost A. M., Raveala, Krista M., Rennison, Diana J., Ribeiro, Milton C., Richardson, Jonathan L., Rivas-Torres, Gonzalo, Rivera, Benjamin J., Roddy, Adam B., Rodriguez-Munoz, Erika, Roman, Jose Raul, Rossi, Laura S., Rowntree, Jennifer K., Ryan, Travis J., Salinas, Santiago, Sanders, Nathan J., Santiago-Rosario, Luis Y., Savage, Amy M., Scheepens, J. F., Schilthuizen, Menno, Schneider, Adam C., Scholier, Tiffany, Scott, Jared L., Shaheed, Summer A., Shefferson, Richard P., Shepard, Caralee A., Shykoff, Jacqui A., Silveira, Georgianna, Smith, Alexis D., Solis-Gabriel, Lizet, Soro, Antonella, Spellman, Katie, V, Whitney, Kaitlin Stack, Starke-Ottich, Indra, Stephan, Jorg G., Stephens, Jessica D., Szulc, Justyna, Szulkin, Marta, Tack, Ayco J. M., Tamburrino, Italo, Tate, Tayler D., Tergemina, Emmanuel, Theodorou, Panagiotis, Thompson, Ken A., Threlfall, Caragh G., Tinghitella, Robin M., Toledo-Chelala, Lilibeth, Tong, Xin, Uroy, Lea, Utsumi, Shunsuke, Vandegehuchte, Martijn L., VanWallendael, Acer, Vidal, Paula M., Wadgymar, Susana M., Wang, Ai-Ying, Wang, Nian, Warbrick, Montana L., Whitney, Kenneth D., Wiesmeier, Miriam, Wiles, J. Tristian, Wu, Jianqiang, Xirocostas, Zoe A., Yan, Zhaogui, Yao, Jiahe, Yoder, Jeremy B., Yoshida, Owen, Zhang, Jingxiong, Zhao, Zhigang, Ziter, Carly D., Zuellig, Matthew P., Zufall, Rebecca A., Zurita, Juan E., Zytynska, Sharon E., Johnson, Marc T. J., Santangelo, James S., Ness, Rob W., Cohan, Beata, Fitzpatrick, Connor R., Innes, Simon G., Koch, Sophie, Miles, Lindsay S., Munim, Samreen, Peres-Neto, Pedro R., Prashad, Cindy, Tong, Alex T., Aguirre, Windsor E., Akinwole, Philips O., Alberti, Marina, Alvarez, Jackie, Anderson, Jill T., Anderson, Joseph J., Ando, Yoshino, Andrew, Nigel R., Angeoletto, Fabio, Anstett, Daniel N., Anstett, Julia, Aoki-Goncalves, Felipe, Arietta, A. Z. Andis, Arroyo, Mary T. K., Austen, Emily J., Baena-Diaz, Fernanda, Barker, Cory A., Baylis, Howard A., Beliz, Julia M., Benitez-Mora, Alfonso, Bickford, David, Biedebach, Gabriela, Blackburn, Gwylim S., Boehm, Mannfred M. A., Bonser, Stephen P., Bonte, Dries, Bragger, Jesse R., Branquinho, Cristina, Brans, Kristien, I, Bresciano, Jorge C., Brom, Peta D., Bucharova, Anna, Burt, Briana, Cahill, James F., Campbell, Katelyn D., Carlen, Elizabeth J., Carmona, Diego, Castellanos, Maria Clara, Centenaro, Giada, Chalen, Izan, Chaves, Jaime A., Chavez-Pesqueira, Mariana, Chen, Xiao-Yong, Chilton, Angela M., Chomiak, Kristina M., Cisneros-Heredia, Diego F., Cisse, Ibrahim K., Classen, Aimee T., Comerford, Mattheau S., Fradinger, Camila Cordoba, Corney, Hannah, Crawford, Andrew J., Crawford, Kerri M., Dahirel, Maxime, David, Santiago, De Haan, Robert, Deacon, Nicholas J., Dean, Clare, Del-Val, Ek, Deligiannis, Eleftherios K., Denney, Derek, Dettlaff, Margarete A., DiLeo, Michelle F., Ding, Yuan-Yuan, Dominguez-Lopez, Moises E., Dominoni, Davide M., Draud, Savannah L., Dyson, Karen, Ellers, Jacintha, Espinosa, Carlos, I, Essi, Liliana, Falahati-Anbaran, Mohsen, Falcao, Jessica C. F., Fargo, Hayden T., Fellowes, Mark D. E., Fitzpatrick, Raina M., Flaherty, Leah E., Flood, Padraic J., Flores, Maria F., Fornoni, Juan, Foster, Amy G., Frost, Christopher J., Fuentes, Tracy L., Fulkerson, Justin R., Gagnon, Edeline, Garbsch, Frauke, Garroway, Colin J., Gerstein, Aleeza C., Giasson, Mischa M., Girdler, E. Binney, Gkelis, Spyros, Godsoe, William, Golemiec, Anneke M., Golemiec, Mireille, Gonzalez-Lagos, Cesar, Gorton, Amanda J., Gotanda, Kiyoko M., Granath, Gustaf, Greiner, Stephan, Griffiths, Joanna S., Grilo, Filipa, Gundel, Pedro E., Hamilton, Benjamin, Hardin, Joyce M., He, Tianhua, Heard, Stephen B., Henriques, Andre F., Hernandez-Poveda, Melissa, Hetherington-Rauth, Molly C., Hill, Sarah J., Hochuli, Dieter F., Hodgins, Kathryn A., Hood, Glen R., Hopkins, Gareth R., Hovanes, Katherine A., Howard, Ava R., Hubbard, Sierra C., Ibarra-Cerdena, Carlos N., Iniguez-Armijos, Carlos, Jara-Arancio, Paola, Jarrett, Benjamin J. M., Jeannot, Manon, Jimenez-Lobato, Vania, Johnson, Mae, Johnson, Oscar, Johnson, Philip P., Johnson, Reagan, Josephson, Matthew P., Jung, Meen Chel, Just, Michael G., Kahilainen, Aapo, Kailing, Otto S., Karinho-Betancourt, Eunice, Karousou, Regina, Kirn, Lauren A., Kirschbaum, Anna, Laine, Anna-Liisa, LaMontagne, Jalene M., Lampei, Christian, Lara, Carlos, Larson, Erica L., Lazaro-Lobo, Adrian, Le, Jennifer H., Leandro, Deleon S., Lee, Christopher, Lei, Yunting, Leon, Carolina A., Tamara, Manuel E. Lequerica, Levesque, Danica C., Liao, Wan-Jin, Ljubotina, Megan, Locke, Hannah, Lockett, Martin T., Longo, Tiffany C., Lundholm, Jeremy T., MacGillavry, Thomas, Mackin, Christopher R., Mahmoud, Alex R., Manju, Isaac A., Marien, Janine, Martinez, D. Nayeli, Martinez-Bartolome, Marina, Meineke, Emily K., Mendoza-Arroyo, Wendy, Merritt, Thomas J. S., Merritt, Lila Elizabeth L., Migiani, Giuditta, Minor, Emily S., Mitchell, Nora, Bazargani, Mitra Mohammadi, Moles, Angela T., Monk, Julia D., Moore, Christopher M., Morales-Morales, Paula A., Moyers, Brook T., Munoz-Rojas, Miriam, Munshi-South, Jason, Murphy, Shannon M., Murua, Maureen M., Neila, Melisa, Nikolaidis, Ourania, Njunji, Iva, Nosko, Peter, Nunez-Farfan, Juan, Ohgushi, Takayuki, Olsen, Kenneth M., Opedal, Oystein H., Ornelas, Cristina, Parachnowitsch, Amy L., Paratore, Aaron S., Parody-Merino, Angela M., Paule, Juraj, Paulo, Octavio S., Pena, Joao Carlos, Pfeiffer, Vera W., Pinho, Pedro, Piot, Anthony, Porth, Ilga M., Poulos, Nicholas, Puentes, Adriana, Qu, Jiao, Quintero-Vallejo, Estela, Raciti, Steve M., Raeymaekers, Joost A. M., Raveala, Krista M., Rennison, Diana J., Ribeiro, Milton C., Richardson, Jonathan L., Rivas-Torres, Gonzalo, Rivera, Benjamin J., Roddy, Adam B., Rodriguez-Munoz, Erika, Roman, Jose Raul, Rossi, Laura S., Rowntree, Jennifer K., Ryan, Travis J., Salinas, Santiago, Sanders, Nathan J., Santiago-Rosario, Luis Y., Savage, Amy M., Scheepens, J. F., Schilthuizen, Menno, Schneider, Adam C., Scholier, Tiffany, Scott, Jared L., Shaheed, Summer A., Shefferson, Richard P., Shepard, Caralee A., Shykoff, Jacqui A., Silveira, Georgianna, Smith, Alexis D., Solis-Gabriel, Lizet, Soro, Antonella, Spellman, Katie, V, Whitney, Kaitlin Stack, Starke-Ottich, Indra, Stephan, Jorg G., Stephens, Jessica D., Szulc, Justyna, Szulkin, Marta, Tack, Ayco J. M., Tamburrino, Italo, Tate, Tayler D., Tergemina, Emmanuel, Theodorou, Panagiotis, Thompson, Ken A., Threlfall, Caragh G., Tinghitella, Robin M., Toledo-Chelala, Lilibeth, Tong, Xin, Uroy, Lea, Utsumi, Shunsuke, Vandegehuchte, Martijn L., VanWallendael, Acer, Vidal, Paula M., Wadgymar, Susana M., Wang, Ai-Ying, Wang, Nian, Warbrick, Montana L., Whitney, Kenneth D., Wiesmeier, Miriam, Wiles, J. Tristian, Wu, Jianqiang, Xirocostas, Zoe A., Yan, Zhaogui, Yao, Jiahe, Yoder, Jeremy B., Yoshida, Owen, Zhang, Jingxiong, Zhao, Zhigang, Ziter, Carly D., Zuellig, Matthew P., Zufall, Rebecca A., Zurita, Juan E., Zytynska, Sharon E., and Johnson, Marc T. J.

Abstract

Urbanization transforms environments in ways that alter biological evolution. We examined whether urban environmental change drives parallel evolution by sampling 110,019 white clover plants from 6169 populations in 160 cities globally. Plants were assayed for a Mendelian antiherbivore defense that also affects tolerance to abiotic stressors. Urban-rural gradients were associated with the evolution of clines in defense in 47% of cities throughout the world. Variation in the strength of clines was explained by environmental changes in drought stress and vegetation cover that varied among cities. Sequencing 2074 genomes from 26 cities revealed that the evolution of urban-rural dines was best explained by adaptive evolution, but the degree of parallel adaptation varied among cities. Our results demonstrate that urbanization leads to adaptation at a global scale.

Published
2022
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42. Species interactions and diversity: a unified framework using Hill numbers.

Author

Godsoe, William, Murray, Rua, and Iritani, Ryosuke

Subjects
*SPECIES diversity, *EARTH (Planet), *PREDATION, *COMMUNITIES, *BIODIVERSITY, *COMPETITION (Biology)
Abstract

Biodiversity describes the variety of organisms on planet earth. Ecologists have long hoped for a synthesis between analyses of biodiversity and analyses of biotic interactions among species, such as predation, competition and mutualism. However, it is often unclear how to connect details of these interactions with complex modern analyses of biodiversity. To resolve this gap, we propose a unification of models of biotic interactions and measurements of diversity. We show that analyses of biodiversity obscure details about biotic interactions. For example, identical changes in biodiversity can arise from predation, competition or mutualism. Our approach indicates that traditional models of community assembly miss key facets of diversity change. Instead, we suggest that analyses of diversity change should focus on partitions, which measure mechanisms that directly shape changes in diversity, notably species level selection and immigration, rather than traditional analyses of biotic interactions. [ABSTRACT FROM AUTHOR]

Published
2023
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48. Global urban environmental change drives adaptation in white clover

Author

Santangelo, James S., primary, Ness, Rob W., additional, Cohan, Beata, additional, Fitzpatrick, Connor R., additional, Innes, Simon G., additional, Koch, Sophie, additional, Miles, Lindsay S., additional, Munim, Samreen, additional, Peres-Neto, Pedro R., additional, Prashad, Cindy, additional, Tong, Alex T., additional, Aguirre, Windsor E., additional, Akinwole, Philips O., additional, Alberti, Marina, additional, Álvarez, Jackie, additional, Anderson, Jill T., additional, Anderson, Joseph J., additional, Ando, Yoshino, additional, Andrew, Nigel R., additional, Angeoletto, Fabio, additional, Anstett, Daniel N., additional, Anstett, Julia, additional, Aoki-Gonçalves, Felipe, additional, Arietta, A. Z. Andis, additional, Arroyo, Mary T. K., additional, Austen, Emily J., additional, Baena-Díaz, Fernanda, additional, Barker, Cory A., additional, Baylis, Howard A., additional, Beliz, Julia M., additional, Benitez-Mora, Alfonso, additional, Bickford, David, additional, Biedebach, Gabriela, additional, Blackburn, Gwylim S., additional, Boehm, Mannfred M. A., additional, Bonser, Stephen P., additional, Bonte, Dries, additional, Bragger, Jesse R., additional, Branquinho, Cristina, additional, Brans, Kristien I., additional, Bresciano, Jorge C., additional, Brom, Peta D., additional, Bucharova, Anna, additional, Burt, Briana, additional, Cahill, James F., additional, Campbell, Katelyn D., additional, Carlen, Elizabeth J., additional, Carmona, Diego, additional, Castellanos, Maria Clara, additional, Centenaro, Giada, additional, Chalen, Izan, additional, Chaves, Jaime A., additional, Chávez-Pesqueira, Mariana, additional, Chen, Xiao-Yong, additional, Chilton, Angela M., additional, Chomiak, Kristina M., additional, Cisneros-Heredia, Diego F., additional, Cisse, Ibrahim K., additional, Classen, Aimée T., additional, Comerford, Mattheau S., additional, Fradinger, Camila Cordoba, additional, Corney, Hannah, additional, Crawford, Andrew J., additional, Crawford, Kerri M., additional, Dahirel, Maxime, additional, David, Santiago, additional, De Haan, Robert, additional, Deacon, Nicholas J., additional, Dean, Clare, additional, del-Val, Ek, additional, Deligiannis, Eleftherios K., additional, Denney, Derek, additional, Dettlaff, Margarete A., additional, DiLeo, Michelle F., additional, Ding, Yuan-Yuan, additional, Domínguez-López, Moisés E., additional, Dominoni, Davide M., additional, Draud, Savannah L., additional, Dyson, Karen, additional, Ellers, Jacintha, additional, Espinosa, Carlos I., additional, Essi, Liliana, additional, Falahati-Anbaran, Mohsen, additional, Falcão, Jéssica C. F., additional, Fargo, Hayden T., additional, Fellowes, Mark D. E., additional, Fitzpatrick, Raina M., additional, Flaherty, Leah E., additional, Flood, Pádraic J., additional, Flores, María F., additional, Fornoni, Juan, additional, Foster, Amy G., additional, Frost, Christopher J., additional, Fuentes, Tracy L., additional, Fulkerson, Justin R., additional, Gagnon, Edeline, additional, Garbsch, Frauke, additional, Garroway, Colin J., additional, Gerstein, Aleeza C., additional, Giasson, Mischa M., additional, Girdler, E. Binney, additional, Gkelis, Spyros, additional, Godsoe, William, additional, Golemiec, Anneke M., additional, Golemiec, Mireille, additional, González-Lagos, César, additional, Gorton, Amanda J., additional, Gotanda, Kiyoko M., additional, Granath, Gustaf, additional, Greiner, Stephan, additional, Griffiths, Joanna S., additional, Grilo, Filipa, additional, Gundel, Pedro E., additional, Hamilton, Benjamin, additional, Hardin, Joyce M., additional, He, Tianhua, additional, Heard, Stephen B., additional, Henriques, André F., additional, Hernández-Poveda, Melissa, additional, Hetherington-Rauth, Molly C., additional, Hill, Sarah J., additional, Hochuli, Dieter F., additional, Hodgins, Kathryn A., additional, Hood, Glen R., additional, Hopkins, Gareth R., additional, Hovanes, Katherine A., additional, Howard, Ava R., additional, Hubbard, Sierra C., additional, Ibarra-Cerdeña, Carlos N., additional, Iñiguez-Armijos, Carlos, additional, Jara-Arancio, Paola, additional, Jarrett, Benjamin J. M., additional, Jeannot, Manon, additional, Jiménez-Lobato, Vania, additional, Johnson, Mae, additional, Johnson, Oscar, additional, Johnson, Philip P., additional, Johnson, Reagan, additional, Josephson, Matthew P., additional, Jung, Meen Chel, additional, Just, Michael G., additional, Kahilainen, Aapo, additional, Kailing, Otto S., additional, Kariñho-Betancourt, Eunice, additional, Karousou, Regina, additional, Kirn, Lauren A., additional, Kirschbaum, Anna, additional, Laine, Anna-Liisa, additional, LaMontagne, Jalene M., additional, Lampei, Christian, additional, Lara, Carlos, additional, Larson, Erica L., additional, Lázaro-Lobo, Adrián, additional, Le, Jennifer H., additional, Leandro, Deleon S., additional, Lee, Christopher, additional, Lei, Yunting, additional, León, Carolina A., additional, Lequerica Tamara, Manuel E., additional, Levesque, Danica C., additional, Liao, Wan-Jin, additional, Ljubotina, Megan, additional, Locke, Hannah, additional, Lockett, Martin T., additional, Longo, Tiffany C., additional, Lundholm, Jeremy T., additional, MacGillavry, Thomas, additional, Mackin, Christopher R., additional, Mahmoud, Alex R., additional, Manju, Isaac A., additional, Mariën, Janine, additional, Martínez, D. Nayeli, additional, Martínez-Bartolomé, Marina, additional, Meineke, Emily K., additional, Mendoza-Arroyo, Wendy, additional, Merritt, Thomas J. S., additional, Merritt, Lila Elizabeth L., additional, Migiani, Giuditta, additional, Minor, Emily S., additional, Mitchell, Nora, additional, Mohammadi Bazargani, Mitra, additional, Moles, Angela T., additional, Monk, Julia D., additional, Moore, Christopher M., additional, Morales-Morales, Paula A., additional, Moyers, Brook T., additional, Muñoz-Rojas, Miriam, additional, Munshi-South, Jason, additional, Murphy, Shannon M., additional, Murúa, Maureen M., additional, Neila, Melisa, additional, Nikolaidis, Ourania, additional, Njunjić, Iva, additional, Nosko, Peter, additional, Núñez-Farfán, Juan, additional, Ohgushi, Takayuki, additional, Olsen, Kenneth M., additional, Opedal, Øystein H., additional, Ornelas, Cristina, additional, Parachnowitsch, Amy L., additional, Paratore, Aaron S., additional, Parody-Merino, Angela M., additional, Paule, Juraj, additional, Paulo, Octávio S., additional, Pena, João Carlos, additional, Pfeiffer, Vera W., additional, Pinho, Pedro, additional, Piot, Anthony, additional, Porth, Ilga M., additional, Poulos, Nicholas, additional, Puentes, Adriana, additional, Qu, Jiao, additional, Quintero-Vallejo, Estela, additional, Raciti, Steve M., additional, Raeymaekers, Joost A. M., additional, Raveala, Krista M., additional, Rennison, Diana J., additional, Ribeiro, Milton C., additional, Richardson, Jonathan L., additional, Rivas-Torres, Gonzalo, additional, Rivera, Benjamin J., additional, Roddy, Adam B., additional, Rodriguez-Muñoz, Erika, additional, Román, José Raúl, additional, Rossi, Laura S., additional, Rowntree, Jennifer K., additional, Ryan, Travis J., additional, Salinas, Santiago, additional, Sanders, Nathan J., additional, Santiago-Rosario, Luis Y., additional, Savage, Amy M., additional, Scheepens, J.F., additional, Schilthuizen, Menno, additional, Schneider, Adam C., additional, Scholier, Tiffany, additional, Scott, Jared L., additional, Shaheed, Summer A., additional, Shefferson, Richard P., additional, Shepard, Caralee A., additional, Shykoff, Jacqui A., additional, Silveira, Georgianna, additional, Smith, Alexis D., additional, Solis-Gabriel, Lizet, additional, Soro, Antonella, additional, Spellman, Katie V., additional, Whitney, Kaitlin Stack, additional, Starke-Ottich, Indra, additional, Stephan, Jörg G., additional, Stephens, Jessica D., additional, Szulc, Justyna, additional, Szulkin, Marta, additional, Tack, Ayco J. M., additional, Tamburrino, Ítalo, additional, Tate, Tayler D., additional, Tergemina, Emmanuel, additional, Theodorou, Panagiotis, additional, Thompson, Ken A., additional, Threlfall, Caragh G., additional, Tinghitella, Robin M., additional, Toledo-Chelala, Lilibeth, additional, Tong, Xin, additional, Uroy, Léa, additional, Utsumi, Shunsuke, additional, Vandegehuchte, Martijn L., additional, VanWallendael, Acer, additional, Vidal, Paula M., additional, Wadgymar, Susana M., additional, Wang, Ai-Ying, additional, Wang, Nian, additional, Warbrick, Montana L., additional, Whitney, Kenneth D., additional, Wiesmeier, Miriam, additional, Wiles, J. Tristian, additional, Wu, Jianqiang, additional, Xirocostas, Zoe A., additional, Yan, Zhaogui, additional, Yao, Jiahe, additional, Yoder, Jeremy B., additional, Yoshida, Owen, additional, Zhang, Jingxiong, additional, Zhao, Zhigang, additional, Ziter, Carly D., additional, Zuellig, Matthew P., additional, Zufall, Rebecca A., additional, Zurita, Juan E., additional, Zytynska, Sharon E., additional, and Johnson, Marc T. J., additional

Published
2022
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50. Additional file 1 of Copper and nanostructured anatase rutile and carbon coatings induce adaptive antibiotic resistance

Author

Wasa, Alibe, Aitken, Jack, Jun, Hyunwoo, Bishop, Catherine, Krumdieck, Susan, Godsoe, William, and Heinemann, Jack A.

Abstract

Additional file 1: Fig. S1.Response of E. coli to various concentrations of (A) Tetracycline (C)Chloramphenicol (E) Ciprofloxacin after surviving exposure to stainless steeland NsARC in the dark and (B) Tetracycline (D) Chloramphenicol (F)Ciprofloxacin after surviving exposure to stainless steel and NsARC undervisible light. Table S1 Bonferronicontrasts (light) for E.coli survivors challenged with kanamycin. Table S2 Bonferroni contrasts (Dark) for E. coli survivors challenged with kanamycin. Table S3 Bonferroni contrasts for E. coli survivors challenged with tetracycline. Table S4 Bonferroni contrasts for E. coli survivors challenged with chloramphenicol. Table S5 Bonferronicontrasts for E. colisurvivors challenged with ciprofloxacin. Figure. S2 Response of S. aureus tovarious concentrations of (A) kanamycin (C) vancomycin (E) erythromycin (G)oxacillin (I)tetracycline (K) fusidic acid after surviving exposure tostainless steel and NsARC in the dark and (B) kanamycin (D) vancomycin (F)erythromycin (H) oxacillin (J) tetracycline (L) fusidic acid after survivingexposure to stainless steel and NsARC under visible light. TableS6 Bonferroni contrasts (Dark) for S. aureussurvivors challenged with kanamycin. Table S7 Bonferronicontrasts (light) for S. aureussurvivors challenged with kanamycin. Table S8 Bonferronicontrasts for S. aureussurvivors challenged with vancomycin. Table S9 Bonferronicontrasts S. aureussurvivors challenged with erythromycin. TableS10 Bonferroni contrasts for S. aureussurvivors challenged with oxacillin. Table S11 Bonferronicontrasts for S. aureussurvivors challenged with tetracycline. TableS12 Bonferroni contrasts for S. aureussurvivor challenged with fusidic acid. TableS13 Tukey’s contrasts for E. coli expressing PtolC-mScarletunderuv light. Table S14 Tukey’s contrasts for E. coli expressingPtolC-mScarlet Under high intensityvisible light. Table S15 Tukey’s contrasts for E. coli expressing PtolC-mScarletunderAmbient light. Table S16 Tukey’s contrasts for E. coli expressing PtolC-mScarletinthe dark. Table S17 Tukey’s contrasts for E. coli expressing PsoxS-mScarletunderuv light. Table S18 Tukey’s contrasts for E. coli expressing PsoxS-mScarletunderhigh intensity visible light. Table S19 Tukey’s contrasts for E. coli expressingPsoxS-mScarlet under Ambient light. TableS20 Tukey’s contrasts for E. coli expressing PsoxS-mScarletinthe dark. Table S21: The minimumconcentration (MIC) of each antibiotic in µg/ml necessary to reducethe EOP of each test organism by at least 1000-fold. NT=not tested.

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2022
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