Search

BackgroundSoybean cyst nematodes (SCN) as animal parasites of plants are not usually interested in killing the host but are rather focused on completing their life cycle to increase population, resulting in substantial yield losses. Remarkably, some agricultural soils after long-term crop monoculture show a significant decline in SCN densities and suppress disease in a sustainable and viable manner. However, relatively little is known about the microbes and mechanisms operating against SCN in such disease-suppressive soils.ResultsGreenhouse experiments showed that suppressive soils (S) collected from two provinces of China and transplantation soils (CS, created by mixing 10% S with 90% conducive soils) suppressed SCN. However, SCN suppressiveness was partially lost or completely abolished when S soils were treated with heat (80 °C) and formalin. Bacterial community analysis revealed that the specific suppression in S and CS was mainly associated with the bacterial phylum Bacteroidetes, specifically due to the enrichment of Chitinophaga spp. and Dyadobacter sp., in the cysts. SCN cysts colonized by Chitinophaga spp. showed dramatically reduced egg hatching, with unrecognizable internal body organization of juveniles inside the eggshell due to chitinase activity. Whereas, Dyadobacter sp. cells attached to the surface coat of J2s increased soybean resistance against SCN by triggering the expression of defence-associated genes. The disease-suppressive potential of these bacteria was validated by inoculating them into conducive soil. The Dyadobacter strain alone or in combination with Chitinophaga strains significantly decreased egg densities after one growing cycle of soybeans. In contrast, Chitinophaga strains alone required more than one growing cycle to significantly reduce SCN egg hatching and population density.ConclusionThis study revealed how soybean monoculture for decades induced microbiota homeostasis, leading to the formation of SCN-suppressive soil. The high relative abundance of antagonistic bacteria in the cyst suppressed the SCN population both directly and indirectly. Because uncontrolled proliferation will likely lead to quick demise due to host population collapse, obligate parasites like SCN may have evolved to modulate virulence/proliferation to balance these conflicting needs. Video Abstract.

SUMMARY Cultivar Williams 82 has served as the reference genome for the soybean research community since 2008, but is known to have areas of genomic heterogeneity among different sub‐lines. This work provides an updated assembly (version Wm82.a6) derived from a specific sub‐line known as Wm82‐ISU‐01 (seeds available under USDA accession PI 704477). The genome was assembled using Pacific BioSciences HiFi reads and integrated into chromosomes using HiC. The 20 soybean chromosomes assembled into a genome of 1.01Gb, consisting of 36 contigs. The genome annotation identified 48 387 gene models, named in accordance with previous assembly versions Wm82.a2 and Wm82.a4. Comparisons of Wm82.a6 with other near‐gapless assemblies of Williams 82 reveal large regions of genomic heterogeneity, including regions of differential introgression from the cultivar Kingwa within approximately 30 Mb and 25 Mb segments on chromosomes 03 and 07, respectively. Additionally, our analysis revealed a previously unknown large (>20 Mb) heterogeneous region in the pericentromeric region of chromosome 12, where Wm82.a6 matches the ‘Williams’ haplotype while the other two near‐gapless assemblies do not match the haplotype of either parent of Williams 82. In addition to the Wm82.a6 assembly, we also assembled the genome of ‘Fiskeby III,’ a rich resource for abiotic stress resistance genes. A genome comparison of Wm82.a6 with Fiskeby III revealed the nucleotide and structural polymorphisms between the two genomes within a QTL region for iron deficiency chlorosis resistance. The Wm82.a6 and Fiskeby III genomes described here will enhance comparative and functional genomics capacities and applications in the soybean community. [ABSTRACT FROM AUTHOR]

The productivity of the soybean crop (Glycine max) can be limited by several factors, including diseases. In the integrated management of diseases, one of the strategies used is chemical control. The aim of this experiment was to evaluate the influence of spray nozzle types on the chemical control of fungal diseases in soybean plants. The experimental design was randomised blocks, with six treatments and four replications. The treatments consisted of control (without fungicide application on soybean plants) and application of fungicides with different spray nozzles: hollow cone jet, double flat jet, extended range flat jet, wide angle flat jet and air induction flat jet. The sprayer used was the backpack pressurised by carbon dioxide CO2. The experiment was installed in the Campos Gerais region (Paraná, Brazil); during three cropping seasons. The evaluated variables were incidence and severity, spray quality (covered area, droplet density, and relative amplitude) and yield components. It was concluded that the chemical control of fungal diseases in soybean plants reduced the proliferation of pathogens and losses in crop yield. There were significant changes in spraying quality in all analysed variables. There were no differences among the spray nozzle types regarding the analysis of incidence, severity and soybean yield components. [ABSTRACT FROM AUTHOR]

Soil salinization is one of the major factors limiting agricultural production. Utilizing beneficial microorganisms like Piriformospora indica (P. indica) to enhance plant tolerance to abiotic stresses is a highly effective method, but the influence of P. indica on the growth of soybean in natural saline-alkaline soil remains unclear. Therefore, we investigated the effects of non-inoculation, P. indica inoculation, and fertilization on the growth, antioxidant defense, osmotic adjustment, and photosynthetic gas exchange parameters of soybean under two different levels of saline-alkaline stress in non-sterilized natural salinealkaline soil. The study found that: 1) P. indica inoculation significantly promoted soybean growth, increasing plant height, root length, and biomass. Under mildly saline-alkaline stress, the increases were 11.5%, 16.0%, and 14.8%, respectively, compared to non-inoculated treatment. Under higher stress, P. indica inoculation achieved the same level of biomass increase as fertilization, while fertilization only significantly improved stem diameter. 2) Under saline-alkaline stress, P. indica inoculation significantly increased antioxidant enzyme activities and reduced malondialdehyde (MDA) content. Under mildly stress, MDA content was reduced by 47.1% and 43.3% compared to non-inoculated and fertilized treatments, respectively. Under moderate stress, the MDA content in the inoculated group was reduced by 29.9% and 36.6% compared to noninoculated and fertilized treatments, respectively. Fertilization only had a positive effect on peroxidase (POD) activity. 3) P. indica inoculation induced plants to produce more osmotic adjustment substances. Under mildly stress, proline, soluble sugars, and soluble proteins were increased by 345.7%, 104.4%, and 6.9%, respectively, compared to non-inoculated treatment. Under higher stress, the increases were 75.4%, 179.7%, and 12.6%, respectively. Fertilization had no significant positive effect on proline content. 4) With increasing stress, soybean photosynthetic capacity in the P. indica-inoculated treatment was significantly higher than in the non-inoculated treatment, with net photosynthetic rate increased by 14.8% and 37.0% under different stress levels. These results indicate that P. indica can enhance soybean's adaptive ability to saline-alkaline stress by regulating ROS scavenging capacity, osmotic adjustment substance content, and photosynthetic capacity, thereby promoting plant growth. This suggests that P. indica has great potential in improving soybean productivity in natural saline-alkaline soils. [ABSTRACT FROM AUTHOR]

Brazil is the world's largest producer and exporter of soybean and studies show that production will continue to grow in the coming years. However, this increase is considered a major challenge due to the serious damage and losses caused by nematodes. The use of resistant materials presents a sustainable alternative for suppressing them. Therefore, the objective was to evaluate the reaction of soybean genotypes to populations of Meloidogyne incognita and M. javanica. Two experiments were carried out for each species, on different dates, under greenhouse conditions, in a randomized block design with ten and twenty-two treatments, respectively, and four replicates. Plants were inoculated ten days after planting with a suspension of 2500 eggs and second-stage juveniles of M. incognita and M. javanica. Evaluations took place sixty days after inoculation (DAI), determining plant height, stem diameter, Spad index, leaf area index, reproduction factor and reproduction factor reduction. For the species M. incognita all genotypes were susceptible. The UFUL 592 and UFUL 298 genotypes had greater vegetative development and the UFUL 526 genotype behaved as a good host for the nematode. For M. javanica, the UFUL 172 and UFUL 592 genotypes showed good performance in terms of growth parameters, as well as nematological ones. In general, the UFUL 592 genotype performed well in the four trials. [ABSTRACT FROM AUTHOR]

AbstractLiming is essential for enhancing economic viability and increasing crop production in acidic soil in tropical and subtropical regions. However, continuous limestone application has been associated with cationic micronutrient deficiency, including zinc (Zn). In an experiment under greenhouse conditions using three soils of different textural classes (Typic Alfisol, Typic Oxisol, and Typic Entisol), we evaluated the growth of soybean after fertilization with limestone and Zn. We applied dolomitic limestone at two rates (equivalent to 0 and 5.0 Mg ha−1) and Zn at four rates (0, 5, 10, and 20 mg kg−1), each with four replicates. These three soil types exhibited distinct nutrient availability. Liming significantly altered soil chemical attributes, particularly causing considerable reduction in Zn availability in Typic Alfisol. Furthermore, liming led to a reduction in Zn concentration in soybean leaves and grains in all the three soil types. Grain yield (GY) increased in the presence of liming, and yield was further enhanced with increasing Zn concentrations. Positive effect was also seen on photosynthetic rate (A), stomatal conductance (gs), and leaf N, Ca, and Zn concentrations, except on P concentration. Even with adequate nutrient concentrations and limestone application, sandy soils had a lower GY. [ABSTRACT FROM AUTHOR]

Most soybean producers in the Cerrado biome use the direct seeding system, making it essential to cultivate cash or cover crops in the off-season, to promote soil protection, as well as increase organic matter, which is directly related to improvements in the chemical and physical characteristics of these soils. In this sense, this work was conducted in Jataí, state of Goias, Brazil, to evaluate the physical-chemical attributes of the soil and the performance of soybeans cultivated in different crop succession systems cultivated for 6 years in the region of Jataí, GO. The experimental design was randomized blocks with four plots and four replications; the crops that followed soybeans were arranged as follows: T1—corn (Zea mays); T2—pearl millet (Pennisetum glaucum); T3—Urochloa ruziziensis; and T4—corn + Urochloa ruziziensis. Soybean yield components and grain yield were evaluated in two harvests (2020/2021 and 2021/2022). Deformed and undisturbed soil samples were collected in 2022 to assess soil fertility and for physical analysis. The data were subjected to analysis of variance (F test) and the means were compared using the Tukey test at 5% probability. The soybean–millet succession system stood out for the chemical and physical attributes of the soil: calcium, magnesium, base saturation, hydrogen + aluminum, and total porosity. The crop succession system did not affect yield for the two years analyzed, but the accumulated grain yields were higher in the crop succession soybean/corn intercropped. The results highlight the importance of using cover crops in improving the physical and chemical qualities of the soil in the long term. However, in the Cerrado, there is a predominance of the soybean/corn succession system motivated by financial issues to the detriment of the qualitative aspects of the soil, in which the introduction of Urochloa ruziziensis in intercropping with corn would improve the chemical attributes of the soil and have a long-term impact on the accumulated grain production. [ABSTRACT FROM AUTHOR]

Arsenic (As) contamination of agricultural soils poses a serious threat to crop productivity and food safety. Zinc oxide nanoparticles (ZnONPs) have emerged as a potential amendment for mitigating the adverse effects of As stress in plants. Soybean crop is mostly grown on marginalized land and is known for high accumulation of As in roots than others tissue. Therefore, this study aimed to elucidate the underlying mechanisms of ZnONPs in ameliorating arsenic toxicity in soybean. Our results demonstrated that ZnOB significantly improved the growth performance of soybean plants exposed to arsenic. This improvement was accompanied by a decrease (55%) in As accumulation and an increase in photosynthetic efficiency. ZnOB also modulated hormonal balance, with a significant increase in auxin (149%), abscisic acid (118%), gibberellin (160%) and jasmonic acid content (92%) under As(V) stress assuring that ZnONPs may enhance root growth and development by regulating hormonal signaling. We then conducted a transcriptomic analysis to understand further the molecular mechanisms underlying the NPs-induced As(V) tolerance. This analysis identified genes differentially expressed in response to ZnONPs supplementation, including those involved in auxin, abscisic acid, gibberellin, and jasmonic acid biosynthesis and signaling pathways. Weighted gene co-expression network analysis identified 37 potential hub genes encoding stress responders, transporters, and signal transducers across six modules potentially facilitated the efflux of arsenic from cells, reducing its toxicity. Our study provides valuable insights into the molecular mechanisms associated with metalloid tolerance in soybean and offers new avenues for improving As tolerance in contaminated soils. [ABSTRACT FROM AUTHOR]

The objective of this study was to determine the best method to establish optimal timing of fungicide applications on corn (Zea mays), soybean (Glycine max), and bean plants (Phaseolus vulgaris), by comparing results based on the calendar versus agrometeorological data. The experimental design was arranged in randomised blocks with three treatments and eight repetitions. Treatments consisted of control (without application of fungicides), application of fungicides based on the calendar (after establishing the need for chemical control, sprays occurring at intervals of 15 days), or by indication of the AgroDetecta™ programme (based on agrometeorological data). The variables evaluated were: disease incidence and severity, area under the disease progress curve (AUDPC), income components, and economic return. Among the integrated disease management tools investigated, it was concluded that chemical control improves crop health and yield for corn, soybean, and bean plants, especially when timing of treatment application is based on the calendar. The programme AgroDetecta™ showed promise as a decision-making tool for the best timing to spray, but requires adjustments for commercial use. [ABSTRACT FROM AUTHOR]

Foxtail millet is an important characteristic grain crop in northern China. However, weeds compete seriously with foxtail millet and have long been a biological factor that has plagued foxtail millet production. Rotation requires determining the species and sequence of crops, and reasonable rotation has many benefits for agriculture, including reducing the damage by weeds. In order to clarify the combination effects of foxtail millet–soybean rotation sequence and herbicide on weed control and crop yield, fixed-position experiments were designed in three growing seasons. Foxtail millet and soybean were planted following the sequence below in successive years (FFF, foxtail millet–wheat–foxtail millet–wheat–foxtail millet; SFF: soybean–wheat–foxtail millet–wheat–foxtail millet; SSF, soybean–wheat–soybean–wheat–foxtail millet; SSS, soybean–wheat–soybean–wheat–soybean), and weed density, biodiversity, weed seedbank, and crop yield were examined and analyzed. The results showed that the average weed density of SFF and SSF was reduced by 61.7% and 66.3% compared with FFF in the three years and by 16.5% and 26.6% compared with SSS, separately. Foxtail millet–soybean rotation (SFF and SSF) increased the species richness and the Margalef species richness index of the weed community and reduced the Simpson index compared with the continuous foxtail millet and the continuous soybean cropping (FFF and SSS). The weed seedbank of SFF and SSF was 45.7% and 55.8% smaller than that of FFF and increased by 92.7% and 56.7% compared with SSS, respectively. The weed density in the FFF treatment was significantly correlated with the 0–5 cm grass seedbank size, while there was no significant correlation in the other three treatments. Benefiting from the lower weed damage intensity, the yield of foxtail millet in SFF and SSF increased by 54.05% and 221.81% compared with FFF, respectively. The research results revealed that both SFF and SSF can effectively reduce the damage of weeds and help improve biodiversity. SSF has a higher weed control effect and higher foxtail millet yield than SFF. This study contributes to the understanding of crop–weed interactions in foxtail millet–soybean rotation and can be applied to areas with similar environments. [ABSTRACT FROM AUTHOR]

Drought stress is a major limiting factor for soybean (Glycine max (L.) Merr.) growth and yield in arid and semiarid regions. This study investigates the N content in different organs and the yield impact of two droughttolerant soybean cultivars, Hei Nong44 and Hei Nong65, under varying drought intensities and re-watering at different growth stages. The results indicate that the effect of drought stress on N content varies with growth stage and organ. During the seedling and flowering stages, the ammoniacal N content in leaves and petioles of both cultivars generally decreased, with a reduction of 16.04%-21.95% during seedling stage and 6.46%-23.52% during flowering stage under severe drought (S), while it increased in stems. The nitrate N content in leaves peaked under moderate drought during the seedling stage and under severe drought during the flowering stage, increasing by 20.00% and 16.21%, 15.71% and 55.56% for 'Hei Nong44' and 'Hei Nong65', respectively, while it decreased in stems. During the pod-filling stage, ammoniacal N content increased in leaves and stems, with an increase of 20.99%-60.13% under S, while it showed a rising-then-falling trend in pods. Nitrate N content had the highest increase in leaves and stems, rising by 67.02%-69.31% under S, while it decreased in petioles with increasing drought severity. After re-watering, both cultivars showed some recovery in N content. Yield reduction was more significant during the flowering and pod-filling stages, decreasing by 17.45%-32.66% and 21.47%-35.63%, respectively. [ABSTRACT FROM AUTHOR]

Climatic conditions cause variation in the availability and nutritional quality of forages; therefore, the use of corn (Zea mays L.) silage has been proposed. However, this crop has a low protein concentration, so the combination with legumes can improve this characteristic. The objective of this study was to evaluate the nutritive value of silage in different proportions of soybean (Glycine max (L.) Merr.) and corn forage grown in a subtropical region. In Tamaulipas, Mexico, six treatments were evaluated: Soybean 100% (S100), corn 100% (C100), and soybean-corn proportions (80%-20%: S80C20; 60%-40%: S60C40; 40%-60%: S40C60, and 20%-80%: S20C80). The variables that were evaluated were: Density, pH, crude protein (CP), neutral detergent fiber (NDF), acid detergent fiber (ADF), lignin, non-fibrous carbohydrates (NFC), starch, crude fat, net energy for lactation (NEL), net energy for weight gain (NEG), and metabolizable energy (ME) and mineral content. Data were analyzed as a completely randomized design with three replicates per treatment. Treatment S100 showed the highest values (p < 0.05) in CP, ADF, crude fat, NEL, and NEG. The C100 had the highest values (p < 0.05) in starch and NFC, and the lowest pH value (p < 0.05). Meanwhile, the S40C60, S60C40, S20C80 combinations showed the highest values (p < 0.05) of TDN, ENL, and ENG. In the case of the combinations, the one with the best values was S40C60. In this regard, the mean values were: CP 143 g kg-1; NEL 1.43 Mcal kg-1; and pH 3.9. According to these values, it is classified as a silage of good nutritional quality, and we recommend its use in subtropical climates. [ABSTRACT FROM AUTHOR]

This study carried out early selection of soybean progenies that are productive and resilient to environmental conditions. The experiment took place at the Genetic Breeding Program of UNIJUI (University of the Northwest of the State of Rio Grande do Sul), located in Ijuí - RS, Brazil. The experiment used augmented blocks design with interim checks. The regular treatments correspond to 24 soybean F2 populations and the common treatments were 18 commercial checks, arranged in four replications. At full physiological maturity, in each experimental unit, five plants were randomly collected to obtain seed weight per plant (SWP, g). The Jinks and Pooni methodology was used to calculate the probability of extracting superior lineages from the evaluated populations. The best control and promising cultivars to compose the parent bank are BMX FORÇA RR, FUNDACEP 66 RR and TMG 7062 IPRO. Jinks and Pooni's methodology identified populations IRC001, IRC002, IRC017, IRC019, IRC028, IRC030, IRC032, IRC033, IRC035, IRC036, IRC039 and IRC040 as having high potential for extraction of superior lineages. [ABSTRACT FROM AUTHOR]

Cold and excess moisture pose a serious threat to soybean production especially during seed germination in short-season environments. In this study, the effects of low temperature and excess moisture stress on seed germination were investigated in 187 soybean accessions originating from 18 countries. The experiment used a combination of three temperature conditions (i.e., 20 °C/14 °C, 14 °C/10 °C, and 10 °C/10 °C day/night) and two moisture levels (i.e., normal and excess). The seed germinability traits measured included germination rate (GR), germination index, germination time, germination uniformity, and coefficient of velocity of germination. Overall, GR was lowest in the 20 °C/14 °C + excess moisture and germination time was longest in the 10 °C/10 °C + excess moisture. When compared with 20 °C/14 °C + normal moisture treatment, GR at 10 °C/10 °C + excess moisture decreased by 38%; germination time increased by 20 days; seed viability decreased by 83%; germination uniformity decreased by 70%; germination speed decreased by 73%. Differences in GR, germination index, and germination velocity under different treatments were affected by temperature, moisture, and their interaction. Variation in germination time uniformity was determined by temperature, with no significant effects of moisture conditions and the interaction of temperature and moisture. It was shown that the temperature–excess moisture interaction led to a sharp decrease in seed germination. Two genotypes including PI 603147 and PI 507702 were identified with a GR over 90% at 10 °C/10 °C + excess moisture. This study generated new knowledge and data to further the understanding of genetic resistance to cold and excess moisture stress in soybean. [ABSTRACT FROM AUTHOR]

Protein hydrolysates are plant biostimulants containing amino acids, oligopeptides, and peptides in their composition. When supplied to plants, protein hydrolysates (HPs) have been identified to improve nitrogen metabolism, enhance the activity of antioxidant enzymes, boost plant defense response to stresses, and positively impact the quantity and quality of products. Soybean is a crucial global commodity, with nitrogen being the primary nutrient for crop development as it directly affects productivity. This study aimed to evaluate the effect of an HP-based biostimulant on the N metabolism in nodulated soybean plants and their productivity. A greenhouse experiment was conducted to test two modes of application of the 0.20% HP-based biostimulant. Soybean plants, growing in pots, were treated with 0.20% HP either via seed treatment or foliar application (at growth stages V3 and V5). Activities of enzymes and compounds related to N metabolism, gene expression, and productivity components were analyzed. It was observed that the mode of application did not significantly influence the results. The application of HPs increased the concentration of nitrate, amino acids, and ureides in soybean leaves. It also positively altered the expression of genes such as nitrate reductase, urease, and asparagine. Additionally, it enhanced productivity, resulting in plants with a greater number and weight of pods and grains. Therefore, it is possible to consider HPs as a stimulator for increasing soybean productivity, even under non-stressing conditions. [ABSTRACT FROM AUTHOR]

Plant-derived biosurfactants are widely used due to their emulsifying and surface-active properties and can be applied in various products. The aim of this present study was to develop a mouthwash using chitosan hydrochloride and saponins extracted from the plants Chenopodium quinoa and Glycine max. After extraction of the biosurfactants using the Soxhlet method, they were characterized with the aid of infrared spectroscopy and subjected to determination of critical micelle concentration, which was found to be 4.0 and 3.5 g/L for C. quinoa and G. max, respectively. The stability of the emulsions was investigated in the presence of different oils and at different values of temperature, pH, and salinity, which showed an emulsification index greater than 40% under all conditions analyzed. After obtaining the mouthwash formulation, tests of foaming capacity, pH, and genotoxicity were performed in cells of onion (Allium cepa) roots. No presence of micronuclei was found in the roots exposed to the formulation, which indicates that there was no aggression to the cells. The results of antimicrobial susceptibility tests revealed bacteriostatic/bactericidal activity as well as antibiofilm activity of formulations against the microorganisms tested. In conclusion, the biosurfactants present in extracts from C. quinoa and G. max were found to be stable, non-toxic molecules with antimicrobial activity, with potential to replace toxic emulsifying agents commonly used in commercial products. [ABSTRACT FROM AUTHOR]

Soybean cultivation in tropical regions relies on symbioses with nitrogen-fixing Bradyrhizobium and plant growth-promoting bacteria (PGPBs), reducing environmental impacts of N fertilizers and pesticides. We evaluate the effects of soybean inoculation with different bacterial consortia combined with PGPBs or microbial secondary metabolites (MSMs) on rhizosoil chemistry, plant physiology, plant nutrition, grain yield, and rhizosphere microbial functions under field conditions over three growing seasons with four treatments: standard inoculation of Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens consortium (SI); SI plus foliar spraying with Bacillus subtilis (SI + Bs); SI plus foliar spraying with Azospirillum brasilense (SI + Az); and SI plus seed application of MSMs enriched in lipo-chitooligosaccharides extracted from B. diazoefficiens and Rhizobium tropici (SI + MSM). Rhizosphere microbial composition, diversity, and function was assessed by metagenomics. The relationships between rhizosoil chemistry, plant nutrition, grain yield, and the abundance of microbial taxa and functions were determined by generalized joint attribute modeling. The bacterial consortia had the most significant impact on rhizosphere soil fertility, which in turn affected the bacterial community, plant physiology, nutrient availability, and production. Cluster analysis identified microbial groups and functions correlated with shifts in rhizosoil chemistry and plant nutrition. Bacterial consortia positively modulated specific genera and functional pathways involved in biosynthesis of plant secondary metabolites, amino acids, lipopolysaccharides, photosynthesis, bacterial secretion systems, and sulfur metabolism. The effects of the bacterial consortia on the soybean holobiont, particularly the rhizomicrobiome and rhizosoil fertility, highlight the importance of selecting appropriate consortia for desired outcomes. These findings have implications for microbial-based agricultural practices that enhance crop productivity, quality, and sustainability. [ABSTRACT FROM AUTHOR]

The objective of this study was to evaluate the straw to decrease the bulk density of sandy clay loam and clay soils and to determine the effect of this on the development of soybean and maize plants. The soils were compacted using Proctor test with different amounts of crushed straw on the soil surface corresponding to 0, 3, 6, 9 and 12 t ha−1. After this, the soils in pots were compacted with same levels of straw on its surface using the maximum bulk density each soil. Then, soybean and maize were sown and after 42 days, biometric characteristics and physiological parameters were evaluated. The results showed that the maximum bulk density and critical soil moisture for the sandy clay loam soil were 1.51 t m−3 and 0.15 kg kg−1, respectively, while those for the clay soil were 1.54 t m−3 and 0.19 kg kg−1. The straw reduced soil compaction for the two soils, resulting in lower soil bulk density with 9 and 8 t ha−1 of straw on the surface of sandy clay loam and clay soils, respectively. When evaluated the plant, the amounts 6 to 9 t ha−1 of straw promoted better initial development of soybean and maize plants. Thus, this study suggests that a minimum of 6 and 8 t ha−1 of straw be used on the surface of sandy clay loam and clay soils, respectively were efficient in promoting physical soil improvements and better plant development. [ABSTRACT FROM AUTHOR]

SUMMARY: Recombination is the primary mechanism underlying genetic improvement in populations and allows plant breeders to create new allelic combinations for agronomic improvement. Soybean [Glycine max (L.) Merr.] has gone through multiple genetic bottlenecks that have significantly affected its genetic diversity, linkage disequilibrium, and altered allele frequencies. To investigate the impact of genetic bottlenecks on recombination hotspots in soybeans, historical recombination was studied in three soybean populations. The populations were wild soybean [Glycine soja (Sieb. and Zucc.)], landraces, and North American elite soybean cultivars that have been genotyped with the SoySNP50K BeadChip. While each population after a genetic bottleneck had an increased average haplotype block size, they did not have a significant difference in the number of hotspots between each population. Instead, the increase in observed haplotype block size is likely due to an elimination of individuals that contained historical recombination at hotspots which decreased the observed rate of recombination for the hotspot after each genetic bottleneck. Conversely, heterochromatic DNA which has an increased haplotype block size compared to euchromatic DNA had a significantly different number of hotspots but not a significant difference in the average hotspot recombination rate. Previously identified genomic motifs associated with hotspots were also associated with hotspots found in the historical populations suggesting a common mechanism. This characterization of historical recombination hotspots in soybeans provides further insights into the effect genetic bottlenecks and selection have on recombination hotspots. Significance Statement: This manuscript provides a first look into soybean recombination hotspots across three diverse soybean populations. The populations used consist of a wild soybean population, landrace population, and North American elite soybean population. Through comparing the characteristics of the hotspots between the populations, this work provides insights into how selection and the genetic bottlenecks of domestication, introduction, and modern plant breeding have affected recombination hotspots and haplotype block structure in soybeans. [ABSTRACT FROM AUTHOR]

The response of Hypoxia Inducible Gene Domain (HIGD) proteins to hypoxia plays a crucial role in plant development. However, the research on this gene family in soybean has been lacking. In this study, we aimed to identify and comprehensively analyze soybean HIGD genes using the Glycine max genome database. As a result, six GmHIGD genes were successfully identified, and their phylogeny, gene structures, and putative conserved motifs were analyzed in comparison to Arabidopsis and rice. Collinearity analysis indicated that the HIGD gene family in soybean has expanded to some extent when compared to Arabidopsis. Additionally, the cis-elements in the promoter regions of GmHIGD and the transcription factors potentially binding to these regions were identified. All GmHIGD genes showed specific responsiveness to submergence and hypoxic stresses. Expression profiling through quantitative real-time PCR revealed that these genes were significantly induced by PEG treatment in root tissue. Coexpressed genes of GmHIGD were primarily associated with oxidoreductase and dioxygenase activities, as well as peroxisome function. Notably, one of GmHIGD genes, GmHIGD3 was found to be predominantly localized in mitochondria, and its overexpression in Arabidopsis led to a significantly reduction in catalase activity compared to wild-type plants. These results bring new insights into the functional role of GmHIGD in terms of subcellular localization and the regulation of oxidoreductase activity. [ABSTRACT FROM AUTHOR]

For soybean, novel single dominant Resistance to Phytophthora sojae (Rps) genes are sought to manage Phytophthora root and stem rot. In this study, resistance to P. sojae was mapped individually in four recombinant inbred line (RIL) populations derived from crosses of the susceptible cultivar Williams with PI 407985, PI 408029, PI 408097, and PI424477 previously identified as putative novel sources of disease resistance. Each population was screened for resistance with five to seven isolates of P. sojae separately over multiple F7-F10 generations. Additionally, three of the populations were screened with inoculum from the combination of three P. sojae isolates (PPR), which comprised virulence to 14 Rps genes. Over 2,300 single-nucleotide polymorphism markers were used to construct genetic maps in each population to identify chromosomal regions associated with resistance to P. sojae. Resistance segregated as one or two genes to the individual isolates and one gene toward PPR in each population and mapped to chromosomes 3, 13, or 18 in one or more of the four RIL populations. Resistance to five isolates mapped to the same chromosome 3 region are as follows: OH7 (PI 424477 and PI408029), OH12168, OH7/8, PPR (PI 407985), and 1.S.1.1 (PI408029). The resistance regions on chromosome 13 also overlapped for OH1, OH25, OH-MIA (PI424477), PPR (PI 424477, PI 407985, and PI 408097), PPR and OH0217 (PI 408097), and OH4 (PI 408029), but were distinct for each population suggesting multiple genes confer resistance. Two regions were identified on chromosome 18 but all appear to map to known loci; notably, resistance to the combined inoculum (PPR) did not map at this locus. However, there are putative new alleles in three of four populations, three on chromosome 3 and two on chromosome 13 based on mapping location but also known virulence in the isolate used. This characterization of all the Rps genes segregating in these populations to these isolates will be informative for breeding, but the combined inoculum was able to map a novel loci. Furthermore, within each of these P. sojae isolates, there was virulence to more than the described Rps genes, and the effectiveness of the novel genes requires testing in larger populations. [ABSTRACT FROM AUTHOR]

Powdery mildew, caused by Erysiphe diffusa, is an emerging pathogen in Australian soybean crops. Since its initial detection in 2012, the disease has been observed every season in soybean paddocks throughout Australia. It is not known how E. diffusa survives between soybean cropping seasons in the Australian environment. This study identified the native Glycine species, G. tabacina, as an alternate host for E. diffusa in Australia. G. tabacina specimens naturally infected with powdery mildew were collected and the pathogen was identified based on morphological characters and nrDNA ITS and MCM7 sequences. Cross‐inoculation experiments demonstrated that the E. diffusa isolates infecting G. tabacina in the field were pathogenic to soybean. This study is the first to report E. diffusa on G. tabacina in Australia. As a perennial native often found in the vicinity of the annual soybean crops, G. tabacina can easily serve as an alternate host for E. diffusa and could be an example of a host range expansion in this powdery mildew species. Weed control in soybean crops, with special attention to the removal of the native Glycine species, may be an option for powdery mildew management for Australian soybean growers. [ABSTRACT FROM AUTHOR]

Soybean, Glycine max (L.) Merr. (Fabaceae), is one of the most important crops worldwide, but caterpillars of various species (Lepidoptera) may greatly reduce its annual yield. Nowadays, the main method of controlling these pest species is based on the use of broad‐spectrum insecticides, which are harmful to human health and increase environmental contamination. Therefore, other sustainable methods of control, such as biological control, are in increasing demand. The present study aimed to identify the egg parasitoid species that attack lepidopterans defoliating soybeans in South America's subtropical regions, as well as evaluate their effectiveness at various stages of soybean development. The research was conducted in a commercial soybean field (80 ha) located in Tucumán, Argentina, which was surrounded by wild vegetation as a way to promote biological control. Every week, throughout three consecutive soybean seasons, 20 soybean plants were randomly selected and brought to the laboratory in search of lepidopteran eggs. Over the course of the three crop seasons, the soybean plants were attacked by Anticarsia gemmatalis Hübner (Erebidae), Rachiplusia nu (Guenée), and Chrysodeixis includens (Walker) (both Noctuidae). Six egg parasitoid species were identified, but only three of them were frequently found during the current study. Trichogramma pretiosum Riley (Hymenoptera: Trichogrammatidae) was the most predominant species attacking all lepidopteran pests across all soybean phenological stages. Encarsia porteri (Mercet) (Hymenoptera: Aphelinidae) preferred to attack R. nu eggs, whereas Telenomus cyamophylax Polaszek (Hymenoptera: Scelionidae) parasitized only A. gemmatalis and R. nu eggs. Despite the use of insecticides in the soybean field, the parasitism rates recorded were high. This suggests that using conservation tactics such as native vegetation patches and surrounding alternative crops may result in higher rates of natural control. [ABSTRACT FROM AUTHOR]

Brazil, the world's largest soybean producer, owes its success to the cultivation of glyphosate-resistant (GR) cultivars. However, the soybean yields lag behind those obtained in areas managed for high productivity. Glyphosate-induced hormesis holds promise for increasing crop yields, but the potential evolution of resistance in certain weed species poses a challenge to foliar applications under field conditions. This study assessed the effects of a hormesis-inducing glyphosate dose [90 g acid equivalent (ae) ha−1] on the agronomic characteristics and yield of four GR soybean cultivars. The evaluation was conducted in field settings across various Brazilian locations, considering foliar, seed, and seed + foliar treatments. The results showed variations in dry mass, root nodules, nutrient composition, plant height, pods, and yield, primarily influenced by environmental conditions, soil quality, and, ultimately, the interaction between GR cultivars and treatments. Total dry mass consistently increased with glyphosate, with seed and seed + foliar treatments showing the most substantial increases (7–21%). All three treatments increased nodulation by up to 36% across locations and cultivars, with seed + foliar treatment causing notable increases in nodule dry mass (up to 56%), followed by seed treatment (41%). Nutrient composition, especially for N, P, Br, and Fe, displayed location-dependent variations. Plant height varied among locations and cultivars, with minimal differences between treatments. Glyphosate treatments increased pod numbers (10 to 35%) and yields (11 to 42%) of soybean in seed and seed + foliar treatments. The findings highlight the potential of glyphosate hormesis as a viable tool for improving yields of GR soybean cultivars at the field level. However, the extent of benefits depends on the agronomic conditions of location, choice of cultivars, and herbicide application method. [ABSTRACT FROM AUTHOR]

Drought is a persistent and devastating obstacle to crop production, affecting both humanity and livestock. The application of selenium (Se) effectively mitigates various types of abiotic stresses and enhances crop yield under unfavorable conditions. However, our understanding of how nano-Se (nSe) alleviates drought stress (DS) in soybeans is still limited. To address this gap, our study focused on assessing the effectiveness of foliar nSe application during the reproductive stage of soybeans. Three concentrations of nSe were applied to plants grown in pots filled with clay loam soil, simulating DS conditions. Our findings reveal that nSe spraying significantly promoted the accumulation of above-ground dry biomass and enhanced relative water content (RWC) and photosynthetic pigment over alone-DS treatment. Furthermore, nSe application boosted the activity and contents of protective enzymes and osmolytes, resulting in a dose-dependent reduction in electrolyte leakage (EL), reactive oxygen species (ROS) accumulation, and malondialdehyde (MDA) content. Additionally, nSe improved stomatal characteristics and mesophyll cell ultrastructure, further mitigating the adverse effects of drought stress. These findings suggest the potential of nSe as an effective strategy to enhance soybean tolerance and potentially improve crop yields under drought conditions. [ABSTRACT FROM AUTHOR]

Mutagenic effectiveness and efficiency are the most important factors determining the success of mutation breeding, a coherent tool for quickly enhancing diversity in crops. This study was carried out at Lovely Professional University's agricultural research farm in Punjab, India, during the year 2023. The experimental design followed a randomized complete block design (RCBD) with three replications. The experiment aimed to assess the effect of three chemical mutagens, sodium azide (SA), ethyl methyl sulphonates (EMSs), and methyl methane sulfonate (MMS), at three different concentrations (0.2%, 0.4%, and 0.6%), in SL958 and SL744 soybean varieties to select the mutant exhibiting the highest yield. The data were collected and analysed using a two-way ANOVA test through SPSS software (version 22), and the means were separated using Duncan's multiple range test (DMRT) at the 5% level of significance. Between the two varieties, the highest seed germination percentage (76.0% seedlings/plot) was recorded in SL958 (0.4% SA), while the lowest (30.33% seedlings/plot) was observed in 0.6% MMS as compared to the control (53% and 76% in SL744 and SL958 at 10 days after sowing, respectively). Several weeks after sowing, the average plant height was observed to be higher (37.84 ± 1.32 cm) in SL958 (0.4% SA) and lower (20.58 ± 0.30 cm) in SL744 (0.6% SA), as compared to the controls (SL958: 26.09 ± 0.62 cm and SL744: 27.48 ± 0.74 cm). The average leaf count was the highest (234.33 ± 3.09 tetrafoliate leaves/plant) in SL958 (0.4% SA) while it was the lowest (87 leaves/plant) in 0.6% MMS as compared to the control (SL744 180.00 ± 1.63 and SL958 160.73 ± 1.05). The highest total leaf areas recorded in the SL958 and SL744 M1plants were 3625.8 ± 1.43 cm2 and 2311.03 ± 3.65 cm2, respectively. Seeds of the SL958 variety treated with 0.4% SA resulted in the development of tetrafoliate leaves with a broad leaf base and the maximum yield (277.55 ± 1.37 pods/plant) compared to the narrow pentafoliate leaves obtained through the treatment with EMS. Meanwhile, in the SL744 variety, the same treatment led to tetrafoliate leaves with a comparatively lower yield of 206.54 ± 23.47 pods/plant as compared to the control (SL744 164.33 ± 8.58 and SL958 229.86 ± 0.96). The highest protein content (47.04 ± 0.87% TSP) was recorded in the SL958 (0.4% SA) M2 seeds followed by a content of 46.14 ± 0.64% TSP in the SL744 (0.4% SA) M2 seeds, whereas the lowest content (38.13 ± 0.81% TSP) was found in SL958 (0.6% MMS). Similar observations were recorded for the lipid and fibre content. The 0.4% SA treatment in SL958 proved to be efficient in generating the highest leaf area (tetrafoliate leaves) and a reasonable yield of M1 (the first generation after mutation) plants. [ABSTRACT FROM AUTHOR]

Anthracnose is one of the most devastating diseases affecting soybean (Glycine max L. Merril) in India and is incited by the Colletotrichum truncatum species complex. In this study, 33 isolates of Colletotrichum spp. isolates were collected from major soybean‐growing states of India. The cultural, morphological and molecular characteristics (Internal Transcribed Spacer rDNA region) of all isolates were demonstrated. Twelve simple sequence repeat (SSR) markers were selected to amplify the genomic DNA of all isolates, to assess the genetic diversity. On the basis of morpho‐cultural and molecular characterization of three different Colletotrichum species, C. truncatum, C. cliviicola and C. cholorophyti were identified. Representative Colletotrichum isolates (Ct‐Pant, Ct‐Gur and Ct‐Gag) from each species group were found pathogenic to susceptible soybean variety (PS 1092) and fulfilled Koch's postulates. The SSR genotyping of 33 isolates revealed that all examined SSR markers exhibited a high degree of polymorphism, as indicated by the mean values of 0.51 for polymorphic information content, 1.97 for marker index and 1.99 for resolving power. For each primer, the average number of alleles per locus was 3.58. The results of Jaccard similarity coefficient‐based UPGMA (Un‐weighted Pair‐Group Method with Arithmetic Mean) cluster analysis and principal component analysis showed that isolates of the same species were clustered together, but no clear‐cut grouping was obtained on the basis of geographical distribution. Thus, it can be inferred from the study that C. truncatum accessions obtained from various geographical locations of India exhibit substantial genetic variation and a significant level of relatedness. [ABSTRACT FROM AUTHOR]

Soybean is frequently affected by pathogenic fungi, which are usually managed by chemicals. Foliar sprays with biological agents have been introduced as new allies to reduce plant diseases. This study verified foliar sprays of Bacillus subtilis‐based product applied for three consecutive cropping seasons associated or not with chemical fungicides to control Asian rust (Phakopsora pachyrhizi) and the effect of B. subtilis‐produced metabolites against pathogenic fungi and on soybean growth. Field treatments were as follows: (i) Foliar application of B. subtilis‐based product, followed by chemical sprays; (ii) chemical management alone; (iii) B. subtilis‐based product alone, and (iv) control treatment with water sprays. In the three years, B. subtilis‐based product alone or followed by chemicals reduced at least 75% the Asian rust severity, similar to chemical management. Moreover, soybean grain yield increased when B. subtilis‐based product was followed by chemicals. Cell‐free filtrates and volatile organic compounds (VOCs) from B. subtilis isolate or from the formulated bioproduct were tested against fungi pathogens Fusarium cf. incarnatum/equiseti and Macrophomina phaseolina. All filtrates and VOCs emission reduced more than 40% the mycelial growth of both fungi. Also, the filtrates stimulated the soybean growth at a rate similar to the bioproduct, indicating the potential of the B. subtilis compounds to control fungi pathogens and promote plant growth. Therefore, the B. subtilis‐based product showed a satisfactory protection and yield increment for soybean and B. subtilis‐produced metabolites antagonized pathogenic fungi and stimulated the soybean plant growth. [ABSTRACT FROM AUTHOR]

Phosphorus (P) is a key element for energy transfer, and biosynthesis of nucleic acids and cell membranes. The objective of this study was to investigate and quantify P utilization by different grain—maize (Zea mays L.) and soybean (Glycine max L.)—and forage-cover crop brachiaria (Brachiaria ruziziensis) plant species in a low fertility highly weathered Oxisol. Two rates of P (25 and 50 mg kg−1) were applied by water-soluble P fertilizer (triple superphosphate) to each of 12 crop cycles, together with a control (no P added). Measurements included plant biomass production and P uptake for each cycle, and analysis of soil P fractions (including labile and non-labile) and enzymes activities (acid phosphatase and β-glucosidase) were done at the beginning of the experiment and after 3, 6, and 12 cycles. Total biomass production and P uptake/removal were significantly higher for brachiaria than maize and soybean, which was reflected in the P use efficiency (PUE), being higher for brachiaria (57%), compared with maize (26%) and soybean (21%). The higher PUE by brachiaria was partly attributed to higher levels of acid phosphatase and β-glucosidase activities which indicated enhanced biological activity and P cycling under brachiaria. Data from the control treatment clearly demonstrated that all three plant species mobilized stable/occluded fractions of P throughout the experiment, however, brachiaria could produce more using less P. The findings of this study indicated the inclusion of brachiaria in crop rotations as a forage or cover crop/green manure may enhance overall P use efficiency. [ABSTRACT FROM AUTHOR]

Besides replacing the mineral fertilization, the biological nitrogen fixation promoted by bacteria from genus Bradyrhizobium provides enough nitrogen to enable high yields in the soybean crop. The objective of this study was to compare the standard inoculation of a product containing Bradyrhizobium spp., either applied alone or associated to Azospirillum brasilense, to the preinoculation by seed treatment in the plant nodulation and productivity of soybean crop grains. The trial was implanted in november, 2020 in four locations (Mandaguaçu/PR, Marialva/PR, Paranavaí/PR, and Itaquiraí/MS) with different edaphoclimatic features. The design with randomized blocks was used, with seven treatments and five repetitions. The evaluated variables were number and dry mass of nodules in the beginning of flowering, dry biomass of the aerial portion, N content and total N in the aerial portion and grains, and grain yield. The results obtained in the four tests enabled to conclude that the inoculation with Bradyrhizobium spp. + Azospirillum brasilense by seed treatment of leaf spraying with Azospirillum showed to be technically feasible in the soybean crop. [ABSTRACT FROM AUTHOR]

Soybean is scientifically known as Glycine max. It belongs to the Fabaceae family. It consists of a lot of bioactive phytochemicals like saponin, phenolic acid, flavonoid, sphingolipids and phytosterols. It also owns excellent immune‐active effects in the physiological system. Soy and its phytochemicals have been found to have pharmacological properties that include anticancer, antioxidant, anti‐hypercholesterolaemic, anti‐diabetic, oestrogenic, anti‐hyperlipidaemic, anti‐inflammatory, anti‐obesity, anti‐hypertensive, anti‐mutagenic, immunomodulatory, anti‐osteoporotic, antiviral, hepatoprotective, antimicrobial, goitrogenic anti‐skin ageing, wound healing, neuroprotective and anti‐photoageing activities. Present study has been designed to set standard pharmacognostical extraction method, complexation of compounds, qualitative evaluation through phytochemical screening, identification by TLC, physicochemical properties, solubility profile, total phenolic, flavonoid content as well as analytical evaluation or characterisation like UV and FT‐IR of methanolic extract of G. max. The final observations like physicochemical properties such as total ash value, LOD and pH were recorded. Phytochemical screenings show the presence of flavonoid, alkaloid, saponin, carbohydrate, tannins, protein, gums and mucilage, fixed oils and fats. The results were found significant. Further in silico studies proved creatinine and euparin to be potent wound healing agents. [ABSTRACT FROM AUTHOR]

Increasing soybean productivity can be achieved by treating seeds with biostimulants. To this end, an investigation was conducted into the potential of a formulation prepared with clove es-sential oil (CEO) diluted in soybean oil for seed treatment. Soybean seeds were treated with CEO concentrations between 0.5 to 3.0 mL/L, and subjected to germination, vigor, and sanity analyses. The CEO at 1.6 mL/L exhibited favorable outcomes regarding germination, root length, and re-duced fungal infection. In this way, a two-crop field experiment evaluated soybean seeds treated with CEO at 1.6 mL/L. Soybean seeds treated with CEO in the field in 2021/2022 were not different from the controls. However, in 2019/2020, there was a higher percentage of emergence, nodulation, and production of 749 kg/ha more than in the industrial treatment. These results highlight the potential use of CEO as a biostimulant. [ABSTRACT FROM AUTHOR]

High rates of limestone have been increasingly utilized in newly converted areas for grain production in agricultural frontier regions to expedite the short-term correction of soil fertility, leading to compensatory yields. However, there is a lack of information about different doses of lime and gypsum for soils in the Cerrado of Matopiba, especially in the state of Piauí, Brazil. The aim of this study was to evaluate the effects of doses of lime and gypsum in newly converted areas for soybean production in the Cerrado of Southwest Piauí. The study was carried out in the 2019/2020 and 2020/2021 crop years, on yellow Oxisol soil, in a randomized block design and treatments following a 5 × 4 factorial: five lime rates (0, 5, 10, 15, and 20 t ha−1) and four gypsum rates (0, 1, 2 and 4 t ha−1), with four replicates. The standard lime and gypsum rates were 5 t ha−1 and 1 t ha−1, respectively. Soil fertility attributes (0.0–0.2, 0.2–0.4, and 0.4–0.6 m), nutritional status of plants, and soybean yield were measured. The increases in grain yield using a lime rate of 10 t ha−1 were 18% and 12% in the 2019/2020 and 2020/2021 crop years, respectively. High lime rates provide a reduction in the concentrations of P, K, and cationic micronutrients in soil, thereby reducing leaf contents of macro- and micronutrients in soybean plants. Concentrations of Ca, Mg, and S in subsurface layers were raised to proper levels, similar to those recommended for topsoil (0.0–0.2 m). The use of gypsum and lime in newly converted areas for soybean cultivation provides quick improvement in soil chemical conditions and reduction in acidity components. The application of 10 t ha−1 of lime improved the soil chemical environment in the Matopiba region the short time available for chemical reactions to occur, allowing soybean cultivation in newly converted areas of Cerrado into agriculture. [ABSTRACT FROM AUTHOR]

Hybrid breeding for increased vigour has been used for over a century to boost agricultural outputs without requiring higher inputs. While this approach has led to some of the most substantial gains in crop productivity, breeding barriers have fundamentally limited soybean (Glycine max) from reaping the benefits of hybrid vigour. Soybean flowers self-pollinate prior to opening and thus are not readily amenable to outcrossing. In this study, we demonstrate that the barnase/barstar male sterility/rescue system can be used in soybean to produce hybrid seeds. By expressing the cytotoxic ribonuclease, barnase, under a tapetum-specific promoter in soybean anthers, we are able to completely block pollen maturation, creating male sterile plants. We show that fertility can be rescued in the F1 generation of these barnase-expressing lines when they are crossed with pollen from plants that express the barnase inhibitor, barstar. Importantly, we found that the successful rescue of male fertility is dependent on the relative dosage of barnase and barstar. When barnase and barstar were expressed under the same tapetum-specific promoter, the F1 offspring remained male sterile. When we expressed barstar under a relatively stronger promoter than barnase, we were able to achieve a successful rescue of male fertility in the F1 generation. This work demonstrates the successful implementation of a biotechnology approach to produce fertile hybrid offspring in soybean.

Abstract Soybean cultivation in tropical regions relies on symbioses with nitrogen-fixing Bradyrhizobium and plant growth-promoting bacteria (PGPBs), reducing environmental impacts of N fertilizers and pesticides. We evaluate the effects of soybean inoculation with different bacterial consortia combined with PGPBs or microbial secondary metabolites (MSMs) on rhizosoil chemistry, plant physiology, plant nutrition, grain yield, and rhizosphere microbial functions under field conditions over three growing seasons with four treatments: standard inoculation of Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens consortium (SI); SI plus foliar spraying with Bacillus subtilis (SI + Bs); SI plus foliar spraying with Azospirillum brasilense (SI + Az); and SI plus seed application of MSMs enriched in lipo-chitooligosaccharides extracted from B. diazoefficiens and Rhizobium tropici (SI + MSM). Rhizosphere microbial composition, diversity, and function was assessed by metagenomics. The relationships between rhizosoil chemistry, plant nutrition, grain yield, and the abundance of microbial taxa and functions were determined by generalized joint attribute modeling. The bacterial consortia had the most significant impact on rhizosphere soil fertility, which in turn affected the bacterial community, plant physiology, nutrient availability, and production. Cluster analysis identified microbial groups and functions correlated with shifts in rhizosoil chemistry and plant nutrition. Bacterial consortia positively modulated specific genera and functional pathways involved in biosynthesis of plant secondary metabolites, amino acids, lipopolysaccharides, photosynthesis, bacterial secretion systems, and sulfur metabolism. The effects of the bacterial consortia on the soybean holobiont, particularly the rhizomicrobiome and rhizosoil fertility, highlight the importance of selecting appropriate consortia for desired outcomes. These findings have implications for microbial-based agricultural practices that enhance crop productivity, quality, and sustainability. Graphical Abstract

From 2016 to 2021, nematode surveys in Florida strawberry fields revealed several species of foliar nematodes (Aphelenchoides spp.). Aphelenchoides besseyi sensu stricto was detected only in 2016 and 2017 on photosynthetic strawberry leaves/buds, but other not well characterized populations of Aphelenchoides sp. were found on declining/dessicated leaves. Morphological analyses showed that these samples of Aphelenchoides sp. consisted of A. bicaudatus, a species detected in Florida for the first time, and A. rutgersi, a species previously reported in Florida from the citrus rhizosphere. These two species differed from A. besseyi in the shape of their tail terminus: bifurcate in A. bicaudatus; mucronate with a ventral thin mucro in A. rutgersi; and stellate in A. besseyi. One population each of these species was used for morphological and molecular analyses after being reared on Monilinia fructicola. Body and tail length differences were observed among Florida A. bicaudatus and other populations from the Far East and South Africa. Phylogenetic analyses of the rRNA gene sequences showed that Florida A. bicaudatus grouped with those of species from South Korea, Taiwan, and the Netherlands and several other populations listed as Aphelenchoides sp. from Brazil, Costa Rica, and Japan, which were considered as representatives of A. bicaudatus in this study. Similarly, sequences of Florida A. rutgersi grouped with those from environmental samples in Japan and North Carolina, which were listed as Aphelenchoides sp. and were considered as representatives of A. rutgersi in this study. Photosynthetic strawberry leaf samples were free from both A. bicaudatus and A. rutgersi, indicating that these two species did not damage strawberry. They were associated with desiccated leaves and/or propagative stolons, usually infected by fungi, confirming that they are mycetophagous under field conditions in this study. Results of soybean leaf inoculation on moist filter paper containing A. bicaudatus specimens showed that this species could become phytophagous under artificial conditions. Nematodes penetrated the leaf epidermis and migrated into the mesophyll causing leaf tissue discoloration/necrosis, which remained localized within the infested area. Soybean leaf damage was almost negligible, and no nematode reproduction was observed in the inoculated soybean areas.

Soybean diseases induced by Cercospora spp. exhibit a global prevalence worldwide. Cercospora kikuchii causes both Cercospora leaf blight (CLB) and purple seed stain (PSS), whereas Cercospora sojina is a causal agent of frogeye leaf spot (FLS). Eighteen Cercospora isolates originating from soybean plants exhibiting CLB, PSS, and FLS symptoms were obtained from continental Russia, the Crimea Peninsula, and South America. The identification was based on the Consolidated Species Concept and involved multi-locus phylogenetic analysis, assessment of cercosporin production capacity, and pathogenicity testing. Ten isolates were identified as C. sojina; the eight remaining ones were categorized into seven distinct species. Two isolates of C. kikuchii were obtained from South America, along with a single isolate each of Cercospora cf. sigesbeckiae and Cercospora sp. Q from the Russian Far East and South America, respectively. Three isolates from the Russian Far East were identified as Cercospora cf. alchemillicola and Cercospora celosiae. A single isolate formed a distinct monophyletic clade that did not include ex-type or representative Cercospora strains and is, therefore, considered a candidate for a new Cercospora species. Cercosporin production in vitro is not a stable and reliable feature for species identification; it could vary and depends on factors such as the nutrient medium composition and the specific lighting conditions during the culturing process. In Russia, multiple Cercospora species are associated with PSS: at least C. cf. alchemillicola, C. cf. sigesbeckiae, and C. celosiae, which are new records for Russia. Cercospora kikuchii and Cercospora sp. Q emerge as causal agents of PSS in South America. PSS and CLB symptoms evident on soybeans are intricate features; thus, they can no longer be definitively regarded as unequivocal signs for the presence of C. kikuchii. [ABSTRACT FROM AUTHOR]

The complex of phytophagous stink bugs is responsible for considerable reductions in the yield potential of soybean crops. Insecticides are usually used for the management of these pests; however, the egg parasitoid Telenomus podisi Ashmead (Hymenoptera: Scelionidae) has become a promising alternative due to its mass production and commercialization in Brazil. This study evaluated the efficacy of inoculative releases of T. podisi prior to the crop critical period of stink bug attack. The experiments were carried out in the field during the 2019/20 and 2020/21 crop years, using a drone for parasitoid releases. The combined analysis of both crop years showed the potential replacement of chemical control with biological control with T. podisi in the initial applications. This change did not significantly affect crop yield, thousand-seed weight (TSW), and seed physiological quality assessed in germination and tetrazolium tests. In addition, the treatment with the first application performed with the parasitoid release, followed by two applications of synthetic insecticides (applied fortnightly), showed no significant differences in the number of stink bugs captured in a vertical beating cloth when compared to the farmer’s pattern (three insecticide applications). Moreover, abundance of generalist predators was higher in the control (without application) and in the treatment constituted by two T. podisi releases. Thus, inoculative releases of T. podisi prior to the critical crop period constitute a promising management alternative for the stink bug complex in soybean crops, contributing to the stability and sustainability of the production system. [ABSTRACT FROM AUTHOR]

Soil compaction between crop rows can increase a machine’s performance by reducing rolling resistance and fuel demand. Controlled Traffic Farm (CTF) stands out among modern techniques for increasing agricultural sustainability because the machines continuously travel along the same path in the field, reducing plant crush and compacting the soil in the traffic line. This study evaluated fuel consumption and CO2 emissions at different CTF intensities in different soil management strategies for soybean crop. The experimental design involved randomized blocks in a split-plot scheme with four replications. The plots constituted the three types of soil management: conventional tillage, no-tillage with straw millet cover, and no-tillage with brachiária straw cover. The subplots constituted for agricultural tractors were passed over in traffic lines (2, 4, and 8 times). We evaluated agricultural tractor fuel consumption, CO2 emissions, and soybean productivity. The straw cover and tractor-pass significantly affected the fuel consumption and greenhouse gas emissions of the soybean cultivation. Fuel consumption and CO2 emissions were reduced due to the machine-pass increase, regardless of soil management. Thus, a CTF reduces rolling resistance and increases crop environmental efficiency. Bare-soil areas increased by 20.8% and 27.9% with respect to fuel consumption, compared to straw-cover systems. Brachiária straw and millet reduce CO2 emissions per hectare by 20% and 28% compared to bare soil. Lower traffic intensities (two passes) showed (13.72%) higher soybean yields (of 4.04 Mg ha−1). Investigating these effects in other types of soil and mechanized operations then becomes essential.

Plants produce diverse flavonoids for defense and stress resistance, most of which have health benefits and are widely used as food additives and medicines. Methylation of the free hydroxyl groups of flavonoids, catalyzed by S-adenosyl-l-methionine-dependent O-methyltransferases (OMTs), significantly affects their physicochemical properties and bioactivities. Soybeans (Glycine max) contain a rich pool of O-methylated flavonoids. However, the OMTs responsible for flavonoid methylation in G. max remain largely unknown. We screened the G. max genome and obtained 22 putative OMT-encoding genes that share a broad spectrum of amino acid identities (25–96%); among them, 19 OMTs were successfully cloned and heterologously expressed in Escherichia coli. We used the flavonoids containing the free 3, 5, 7, 8, 3′, 4′ hydroxyl group, such as flavones (luteolin and 7, 8-dihydroxyflavone), flavonols (kaempferol and quercetin), flavanones (naringenin and eriodictyol), isoflavonoids (daidzein and glycetein), and caffeic acid as substrates, and 15 OMTs were proven to catalyze at least one substrate. The methylation activities of these GmOMTs covered the 3, 7, 8, 3′, 4′- hydroxyl of flavonoids and 7, 4′- hydroxyl of isoflavonoids. The systematic characterization of G. max flavonoid OMTs provides insights into the biosynthesis of methylated flavonoids in soybeans and OMT bioparts for the production of methylated flavonoids via synthetic biology.

Abstract Background Drought can result in yield losses, the application of plant growth regulators is an effective measure to improve drought resistance and yield. The objective of the study was to explore the application potential of mepiquat chloride (MC) in regulating soybean yield and drought resistance. Methods In this study, a three-year field experiment was designed and combined with drought experiments to measure the yield of popularized varieties during 2021–2022 and drought-resistant and drought-sensitive varieties were selected, and planted in the field in 2023. Results MC increased the yield of HN84 and HN87 for two consecutive years from 2021 to 2022 and improved their physiological characteristics under field conditions. Under M200 treatment, the yield of HN84 increased by 6.93% and 9.46%, and HN87 increased by 11.11% and 15.72%. Different concentrations of MC have different effects on soybeans. The maximum increase of SOD, POD and proline in HN84 under M400 treatment reached 71.92%, 63.26% and 71.54%, respectively; the maximum increase of SOD, POD and proline in HN87 under M200 treatment reached 21.96%, 93.49% and 40.45%, respectively. In 2023, the foliar application of MC improved the physiological characteristics of HN44 and HN65 under drought-stress conditions. On the eighth day of drought treatment, compared to the drought treatment, the leaf and root dry weight of HN44 under M100 treatment increased by 17.91% and 32.76%, respectively; the dry weight of leaves and roots of HN65 increased by 20.74% and 29.29% under M200 treatment, respectively. MC also reduced malondialdehyde (MDA) content, decreased antioxidant enzyme activity and proline content. In addition, different concentrations of MC increased the chlorophyll fluorescence parameters (Fs, Fv/Fm, YII, and SPAD). In the field, the plant height of the two varieties decreased significantly, the yield increased, the number of two-grain and three-grain pods increased, and the stem length at the bottom and middle decreased with MC induction. Conclusions The application of 100–200 mg/L MC effectively improved drought resistance and increased yield. This study provided support for the rational application of MC in soybean production.

ABSTRACTIt is well known that the growth of legumes is greatly affected not only by fertilizer nitrogen but also by fixed nitrogen by symbiosis with rhizobia. We have reported that a polymorphism in SEN1, which is essential for nitrogen fixation in Lotus japonicus, could be used to enhance nitrogen fixation and plant growth. In this study, we examined whether the same strategy could be applied to Glycine max. Sequencing of orthologs of the LjSEN1 gene in 38 soybean cultivars revealed that the polymorphism occurred at Glyma.08g076300. We defined the standard sequence that most of the cultivars retained as Peking type SEN1, and the mutated sequence found in Enrei as Enrei type SEN1. To investigate the effect of genotype differences, we generated near-isogenic lines by crossing Enrei with Fukuyutaka, which has Peking type SEN1, and analyzed their characteristics. The results showed that Enrei type enhanced nitrogen fixation activity and promoted plant growth. Since soybean SEN1 has been reported to be a homolog of vacuolar iron transporter-like protein, we investigated the iron content in the nodules. In the result, the iron content in the nodules of Enrei type was significantly higher than that of Peking type. Iron is known to be present in the active center of nitrogenase, and the high iron content may have contributed to the increased nitrogen fixation activity. These results suggest that Enrei type SEN1 is a nitrogen fixation enhancing gene and that introduction of Enrei type SEN1 may reduce nitrogen fertilizer application and increase yield.

Abstract Background Genetically modified (GM) crop plants with transgenic expression of Bacillus thuringiensis (Bt) pesticidal proteins are used to manage feeding damage by pest insects. The durability of this technology is threatened by the selection for resistance in pest populations. The molecular mechanism(s) involved in insect physiological response or evolution of resistance to Bt is not fully understood. Results To investigate the response of a susceptible target insect to Bt, the soybean pod borer, Leguminivora glycinivorella (Lepidoptera: Tortricidae), was exposed to soybean, Glycine max, expressing Cry1Ac pesticidal protein or the non-transgenic parental cultivar. Assessment of larval changes in gene expression was facilitated by a third-generation sequenced and scaffolded chromosome-level assembly of the L. glycinivorella genome (657.4 Mb; 27 autosomes + Z chromosome), and subsequent structural annotation of 18,197 RefSeq gene models encoding 23,735 putative mRNA transcripts. Exposure of L. glycinivorella larvae to transgenic Cry1Ac G. max resulted in prediction of significant differential gene expression for 204 gene models (64 up- and 140 down-regulated) and differential splicing among isoforms for 10 genes compared to unexposed cohorts. Differentially expressed genes (DEGs) included putative peritrophic membrane constituents, orthologs of Bt receptor-encoding genes previously linked or associated with Bt resistance, and those involved in stress responses. Putative functional Gene Ontology (GO) annotations assigned to DEGs were significantly enriched for 36 categories at GO level 2, respectively. Most significantly enriched cellular component (CC), biological process (BP), and molecular function (MF) categories corresponded to vacuolar and microbody, transport and metabolic processes, and binding and reductase activities. The DEGs in enriched GO categories were biased for those that were down-regulated (≥ 0.783), with only MF categories GTPase and iron binding activities were bias for up-regulation genes. Conclusions This study provides insights into pathways and processes involved larval response to Bt intoxication, which may inform future unbiased investigations into mechanisms of resistance that show no evidence of alteration in midgut receptors.

Interaction between transcription factors (TFs) and motifs is essential for gene regulation and the subsequent phenotype formation. Soybean (Glycine max) JAGGEED 1 (GmJAG1) is a key TF that controls leaf shape, seed number and flower size. To understand the GmJAG1 binding motifs, in this study, we performed the GmJAG1 DNA affinity purification sequencing (DAP-seq) experiment, which is a powerful tool for the de novo motif prediction method. Two new significant GmJAG1 binding motifs were predicted and the EMSA experiments further verified the ability of GmJAG1 bound to these motifs. The potential binding sites in the downstream gene promoter were identified through motif scanning and a potential regulatory network mediated by GmJAG1 was constructed. These results served as important genomic resources for further understanding the regulatory mechanism of GmJAG1. [ABSTRACT FROM AUTHOR]

Soybean production is significantly impacted by Phytophthora root rot (PRR), which is caused by Phytophthora sojae. The nucleotide-binding leucine-rich repeat (NLR) gene family plays a crucial role in plant disease resistance. However, current understanding of the function of soybean NLR genes in resistance to PRR is limited. To address this knowledge gap, transgenic soybean plants overexpressing the NLR gene (Glyma.18g283200) were generated to elucidate the molecular mechanism of resistance. Here, transcript changes and metabolic differences were investigated at three time points (12, 24, and 36 h) after P. sojae infection in hypocotyls of two soybean lines, Dongnong 50 (susceptible line, WT) and Glyma.18g283200 overexpression line (resistant line, OE). Based on the changes in differentially expressed genes (DEGs) in response to P. sojae infection in different lines and at different time points, it was speculated that HOPZ-ACTIVATED RESISTANCE 1 (ZAR1), valine, leucine, and isoleucine degradation, and phytohormone signaling may be involved in the defense response of soybean to P. sojae at the transcriptome level by GO term and KEGG pathway enrichment analysis. Differentially accumulated metabolites (DAMs) analysis revealed that a total of 223 and 210 differential metabolites were identified in the positive ion (POS) and negative ion (NEG) modes, respectively. An integrated pathway-level analysis of transcriptomics (obtained by RNA-seq) and metabolomics data revealed that isoflavone biosynthesis was associated with disease resistance. This work provides valuable insights that can be used in breeding programs aiming to enhance soybean resistance against PRR. [ABSTRACT FROM AUTHOR]

Soil compaction between crop rows can increase a machine's performance by reducing rolling resistance and fuel demand. Controlled Traffic Farm (CTF) stands out among modern techniques for increasing agricultural sustainability because the machines continuously travel along the same path in the field, reducing plant crush and compacting the soil in the traffic line. This study evaluated fuel consumption and CO2 emissions at different CTF intensities in different soil management strategies for soybean crop. The experimental design involved randomized blocks in a split-plot scheme with four replications. The plots constituted the three types of soil management: conventional tillage, no-tillage with straw millet cover, and no-tillage with brachiária straw cover. The subplots constituted for agricultural tractors were passed over in traffic lines (2, 4, and 8 times). We evaluated agricultural tractor fuel consumption, CO2 emissions, and soybean productivity. The straw cover and tractor-pass significantly affected the fuel consumption and greenhouse gas emissions of the soybean cultivation. Fuel consumption and CO2 emissions were reduced due to the machine-pass increase, regardless of soil management. Thus, a CTF reduces rolling resistance and increases crop environmental efficiency. Bare-soil areas increased by 20.8% and 27.9% with respect to fuel consumption, compared to straw-cover systems. Brachiária straw and millet reduce CO2 emissions per hectare by 20% and 28% compared to bare soil. Lower traffic intensities (two passes) showed (13.72%) higher soybean yields (of 4.04 Mg ha−1). Investigating these effects in other types of soil and mechanized operations then becomes essential. [ABSTRACT FROM AUTHOR]

Background: Seed sorting by seed size has been increasingly given importance in Türkiye but little is known about the impacts of seed size of soybean on germination and seedling growth, in regions suffering from salinity problems. Methods: The seeds classified as small (6-7 mm for Ataem, 4-6 mm for Kocatürk, 4-7 mm for Batem Erensoy and 4-5 mm for Göksoy) and large (>8 mm for Ataem and Batem Erensoy, >7 mm for Kocatürk and >6 mm for Göksoy. Seeds were exposed to 0, 10 and 20 dS m-1 of NaCl. Germination percentage, mean germination time and seedling growth parameters were investigated and compared. Result: Investigations revealed that, regardless of variety small seeds had a high content of chlorophyll pigments and slow and late mean germination time under NaCl stress. Emergence percentage differentiated in relation to seed size large seeds with 90.67% and small seeds with 73.67%. In conclusion, the large seeds produced significantly vigorous germination and seedling growth related to their high nutrient reserves and containing less chlorophyll pigmentation in their seeds. Therefore, care should be taken to select larger seeds, under saline conditions (10 dS m-1). [ABSTRACT FROM AUTHOR]

Soybean [Glycine max (L.) Merr.] is one of the most important and oldest crops. Due to its ability to form symbiotic interactions with nitrogen-fixing bacteria, it is a valuable source of nitrogen for agriculture and proteins for humans and livestock. In Europe, for instance, in Poland, the soybean cultivation area is still not large but is gradually increasing due to climate change. The lack of indigenous soybean microsymbionts in Polish soils forces the application of commercial strains to establish effective symbioses. Fast and reliable identification methods are needed to study the persistence, competitiveness, and dispersal of bradyrhizobia introduced as inocula. Our study aimed to apply real-time PCR coupled with high-resolution melting curve (HRM) analysis to detect and differentiate bacterial strains occupying soybean nodules. HRM-PCR was performed on crude extracts from nodules using primers specific for recA, a highly conserved nonsymbiotic gene. By comparing them with the reference strains, we were able to identify and assign Bradyrhiobium strains that had been introduced into field locations in Poland. In conclusion, HRM analysis was proven to be a fast and accurate method for identifying soybean microsymbionts and might be successfully used for identifying other legume-nodulating bacteria. [ABSTRACT FROM AUTHOR]

A positive relationship between protein concentration and yield has been documented in different combinations of genotype and environment, often under potential conditions. However, the ecophysiological bases underlying this positive relationship under heat stress (HS) and drought stress (DS) during seed filling are still lacking. Our objective was to evaluate the relationship between seed protein content and concentration with yield in field experiments exposed to HS, DS and HS × DS interaction during the seed filling. Two field experiments were conducted and assimilates accumulation, remobilization and redistribution patterns were analysed in high and low seed protein soybean genotypes. The crop was exposed to four treatments: control (ambient temperature and soil water content near field capacity), HS (episodes above 32°C, 6 h d−1) during 15 days, DS (soil water content ≤25% of field capacity) during the whole seed filling and HS × DS. Significant and positive relationships between seed protein content and concentration with yield were observed across treatments and genotypes. Under DS and HS × DS, assimilates available during the seed filling decreased, and assimilates remobilization and partition to seeds were limited, responses significantly associated with seed protein content and concentration, and yield reductions. Furthermore, we demonstrated here that the high leaf N content at the beginning of seed filling, the short early reproductive phase duration, the high source to sink ratio and the high dry matter stem remobilization capacity, as well as the low seed number and high seed weight are intrinsic characteristics of the high protein genotype that could be associated with its high seed protein content and concentration and yield under stressful conditions. This knowledge is key to develop soybean management strategies to improve seed protein level and yield under contrasting productive scenarios. [ABSTRACT FROM AUTHOR]

(-)-Epicatechin (EC), a primary form of flavan-3ol and a building block of proanthocyanidins, has health benefits as it is a potent antioxidant. So far, no quantitative trait loci (QTLs) associated with EC have yet been identified in soybean. In this study, QTLs for EC and hilum color were identified in recombinant inbred lines (RILs) derived from the varieties Jinpung and IT109098 using high-resolution single nucleotide polymorphism linkage mapping. This revealed two major QTLs for EC content, qEC06 and qEC08. qEC06 spanned the Tawny (T) locus encoding flavonoid 3′-hydroxylase. qEC08, located near the Inhibitor (I) locus on Chr08, was also a major QTL for hilum color; however, allelic stacking of qEC08 and I revealed no relationship between I and EC content. RILs with IT109098 alleles at both qEC06 and qEC08 had higher EC content than other lines. These results will enable the production of soybean varieties with high EC content via marker-assisted selection. [ABSTRACT FROM AUTHOR]