1. A Tandem of SH3-like Domains Participates in RNA Binding in KIN17, a Human Protein Activated in Response to Genotoxics
- Author
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Joël Couprie, Sophie Zinn-Justin, Enrico A. Stura, Ghislaine Pinon-Lataillade, M. Schiltz, Muriel Gondry, Albane le Maire, Jaime F. Angulo, Mireille Moutiez, Département d'Ingenierie et d'Etudes des Protéines (DIEP), Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Ecole Polytechnique Fédérale de Lausanne (EPFL), Institut des Sciences du Vivant Frédéric JOLIOT (JOLIOT), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Service d'Ingénierie Moléculaire pour la Santé (ex SIMOPRO) (SIMoS), Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), and CEA, DSV, DRR, Service de Génomique Fonctionnelle
- Subjects
RNA-binding protein ,Biology ,DNA-binding protein ,src Homology Domains ,Structural Biology ,Humans ,SH3-like fold ,Binding site ,Nuclear protein ,Molecular Biology ,Gene ,Regulation of gene expression ,Binding Sites ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,KIN17 protein ,Lysine ,Nuclear Proteins ,RNA-Binding Proteins ,RNA ,Tungsten Compounds ,RNA binding ,Cell biology ,DNA-Binding Proteins ,Gene Expression Regulation ,Biochemistry ,tungstate ,TAF4 ,X-ray structure ,Mutagens - Abstract
International audience; The human KIN17 protein is an essential nuclear protein conserved from yeast to human and expressed ubiquitously in mammals. Suppression of Rts2, the yeast equivalent of gene KIN17, renders the cells unviable, and silencing the human KIN17 gene slows cell growth dramatically. Moreover, the human gene KIN17 is up-regulated following exposure to ionizing radiations and UV light, depending on the integrity of the human global genome repair machinery. Its ectopic over-expression blocks S-phase progression by inhibiting DNA synthesis. The C-terminal region of human KIN17 is crucial for this anti-proliferation effect. Its high-resolution structure, presented here, reveals a tandem of SH3-like subdomains. This domain binds to ribonucleotide homopolymers with the same preferences as the whole protein. Analysis of its structure complexed with tungstate shows structural variability within the domain. The interaction with tungstate is mediated by several lysine residues located within a positively charged groove at the interface between the two subdomains. This groovecould be the site of interaction with RNA, since mutagenesis of two of these highly conserved lysine residue weakens RNA binding
- Published
- 2006
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