131 results on '"Gerke T"'
Search Results
2. IRONMAN: A Novel International Registry of Men With Advanced Prostate Cancer.
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Mucci, LA, Vinson, J, Gold, T, Gerke, T, Filipenko, J, Green, RM, Anderson, SG, Badal, S, Bjartell, A, Chi, KN, Davis, ID, Enting, D, Fay, AP, Lazarus, J, Mateo, J, McDermott, R, Odedina, FT, Olmos, D, Omlin, A, Popoola, AA, Ragin, C, Roberts, R, Russnes, KM, Waihenya, C, Stopsack, KH, Hyslop, T, Villanti, P, Kantoff, PW, George, DJ, IRONMAN Global Team, Mucci, LA, Vinson, J, Gold, T, Gerke, T, Filipenko, J, Green, RM, Anderson, SG, Badal, S, Bjartell, A, Chi, KN, Davis, ID, Enting, D, Fay, AP, Lazarus, J, Mateo, J, McDermott, R, Odedina, FT, Olmos, D, Omlin, A, Popoola, AA, Ragin, C, Roberts, R, Russnes, KM, Waihenya, C, Stopsack, KH, Hyslop, T, Villanti, P, Kantoff, PW, George, DJ, and IRONMAN Global Team
- Abstract
PURPOSE: To describe a newly established international registry recruiting diverse patients with advanced prostate cancer across academic and community practices to address unmet needs in this population. PATIENTS AND METHODS: Initiated in 2017, IRONMAN (International Registry for Men with Advanced Prostate Cancer) is a prospective cohort of patients with advanced prostate cancer. The study will enroll 5,000 patients with metastatic hormone-sensitive prostate cancer (mHSPC) or castration-resistant prostate cancer (CRPC), recruited from Australia, the Bahamas, Barbados, Brazil, Canada, Ireland, Jamaica, Kenya, Nigeria, Norway, South Africa, Spain, Sweden, Switzerland, the United Kingdom, and the United States. The study is collecting datatypes to study variation in care and treatment of advanced prostate cancer across countries and across academic, community-based, and government practices with a focus on clinical outcomes, patient-reported outcomes, epidemiologic data, biologic subtypes, and clinician questionnaires. RESULTS: Through July 2022, 2,682 eligible patients were enrolled in 11 of 12 active countries. Sixty-six percent of patients have mHSPC, and 34% have CRPC. On the basis of self-report, 11% of patients are Black and 9% are Hispanic. Five Veterans Affairs Medical Centers are enrolling patients. Globally, 23% of patients report being veterans of military service. CONCLUSION: To our knowledge, this is the first international cohort of people newly diagnosed with advanced prostate cancer designed to describe variations in patient management, experiences, and outcomes. IRONMAN aims to identify optimal treatment sequences to improve survival, understand patient-reported outcomes, and explore novel biomarkers to understand treatment resistance mechanisms. Insights from IRONMAN will inform and guide future clinical management of people with mHSPC and CRPC. This cohort study will provide real-world evidence to facilitate a better understanding of the survivorshi
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- 2022
3. Changes in bacterial composition of biofilm in a metropolitan drinking water distribution system
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Revetta, R. P., Gomez-Alvarez, V., Gerke, T. L., Santo Domingo, J. W., and Ashbolt, N. J.
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- 2016
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4. Statistical framework for studying the spatial architecture of the tumor immune microenvironment
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Gerke T, Nguyen J, Lauren C. Peres, Joellen M. Schildkraut, Segura Cm, Chris Wilson, Brooke L. Fridley, Thapa R, and Creed J
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Spatial contextual awareness ,Immune system ,Complete spatial randomness ,Tissue microarray ,Epidemiology of cancer ,medicine ,Cytotoxic T cell ,Multiplex ,Computational biology ,Biology ,Ovarian cancer ,medicine.disease - Abstract
New technologies, such as multiplex immunofluorescence microscopy (mIF), are being developed and used for the assessment and visualization of the tumor immune microenvironment (TIME). These assays produce not only an estimate of the abundance of immune cells in the TIME, but also their spatial locations; however, there are currently few approaches to analyze the spatial context of the TIME. Thus, we have developed a framework for the spatial analysis of the TIME using Ripley’s K, coupled with a permutation-based framework to estimate and measure the departure from complete spatial randomness (CSR) as a measure of the interactions between immune cells. This approach was then applied to ovarian cancer using mIF collected on intra-tumoral regions of interest (ROIs) and tissue microarrays (TMAs) from 158 high-grade serous ovarian carcinoma patients in the African American Cancer Epidemiology Study (AACES) (94 subjects on TMAs resulting in 259 tissue cores; 91 subjects with 254 ROIs). Cox proportional hazard models were constructed to determine the association of abundance and spatial clustering of tumor-infiltrating lymphocytes, cytotoxic T-cells, and regulatory T-cells, and overall survival. We found that EOC patients with high abundance and low spatial clustering of tumor-infiltrating lymphocytes and cytotoxic T-cells in their tumors had the best overall survival. In contrast, patients with low levels of regulatory T-cells but with a high level of spatial clustering (compare to those with a low level of spatial clustering) had better survival. These findings underscore the prognostic importance of evaluating not only immune cell abundance but also the spatial contexture of the immune cells in the TIME. In conclusion, the application of this spatial analysis framework to the study of the TIME could lead to the identification of immune content and spatial architecture that could aid in the determination of patients that are likely to respond to immunotherapies.
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- 2021
5. KLK3 SNP-SNP interactions for prediction of prostate cancer aggressiveness.
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Pandha H., Berglund A.E., Chen A., French-Kwawu J., Harris D., Pow-Sang J., Yamoah K., Cleveland J.L., Awasthi S., Rounbehler R.J., Gerke T., Dhillon J., Eeles R., Teixeira M.R., Cannon-Albright L., Brenner H., Kaneva R., Fang Z., Srinivasan S., Clements J., Batra J., Park J.Y., Lin H.-Y., Huang P.-Y., Cheng C.-H., Tung H.-Y., Kote-Jarai Z., Muir K., Schleutker J., Pashayan N., Neal D.E., Nielsen S.F., Nordestgaard B.G., Gronberg H., Wiklund F., Giles G.G., Haiman C.A., Travis R.C., Stanford J.L., Kibel A.S., Cybulski C., Khaw K.-T., Maier C., Thibodeau S.N., Pandha H., Berglund A.E., Chen A., French-Kwawu J., Harris D., Pow-Sang J., Yamoah K., Cleveland J.L., Awasthi S., Rounbehler R.J., Gerke T., Dhillon J., Eeles R., Teixeira M.R., Cannon-Albright L., Brenner H., Kaneva R., Fang Z., Srinivasan S., Clements J., Batra J., Park J.Y., Lin H.-Y., Huang P.-Y., Cheng C.-H., Tung H.-Y., Kote-Jarai Z., Muir K., Schleutker J., Pashayan N., Neal D.E., Nielsen S.F., Nordestgaard B.G., Gronberg H., Wiklund F., Giles G.G., Haiman C.A., Travis R.C., Stanford J.L., Kibel A.S., Cybulski C., Khaw K.-T., Maier C., and Thibodeau S.N.
- Abstract
Risk classification for prostate cancer (PCa) aggressiveness and underlying mechanisms remain inadequate. Interactions between single nucleotide polymorphisms (SNPs) may provide a solution to fill these gaps. To identify SNP-SNP interactions in the four pathways (the angiogenesis-, mitochondria-, miRNA-, and androgen metabolism-related pathways) associated with PCa aggressiveness, we tested 8587 SNPs for 20,729 cases from the PCa consortium. We identified 3 KLK3 SNPs, and 1083 (P<3.5x10-9) and 3145 (P<1x10-5) SNP-SNP interaction pairs significantly associated with PCa aggressiveness. These SNP pairs associated with PCa aggressiveness were more significant than each of their constituent SNP individual effects. The majority (98.6%) of the 3145 pairs involved KLK3. The 3 most common gene-gene interactions were KLK3-COL4A1:COL4A2, KLK3-CDH13, and KLK3-TGFBR3. Predictions from the SNP interaction-based polygenic risk score based on 24 SNP pairs are promising. The prevalence of PCa aggressiveness was 49.8%, 21.9%, and 7.0% for the PCa cases from our cohort with the top 1%, middle 50%, and bottom 1% risk profiles. Potential biological functions of the identified KLK3 SNP-SNP interactions were supported by gene expression and protein-protein interaction results. Our findings suggest KLK3 SNP interactions may play an important role in PCa aggressiveness.
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- 2021
6. KLK3 SNP-SNP interactions for prediction of prostate cancer aggressiveness
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Lin, H-Y, Huang, P-Y, Cheng, C-H, Tung, H-Y, Fang, Z, Berglund, AE, Chen, A, French-Kwawu, J, Harris, D, Pow-Sang, J, Yamoah, K, Cleveland, JL, Awasthi, S, Rounbehler, RJ, Gerke, T, Dhillon, J, Eeles, R, Kote-Jarai, Z, Muir, K, Schleutker, J, Pashayan, N, Neal, DE, Nielsen, SF, Nordestgaard, BG, Gronberg, H, Wiklund, F, Giles, GG, Haiman, CA, Travis, RC, Stanford, JL, Kibel, AS, Cybulski, C, Khaw, K-T, Maier, C, Thibodeau, SN, Teixeira, MR, Cannon-Albright, L, Brenner, H, Kaneva, R, Pandha, H, Srinivasan, S, Clements, J, Batra, J, Park, JY, Lin, H-Y, Huang, P-Y, Cheng, C-H, Tung, H-Y, Fang, Z, Berglund, AE, Chen, A, French-Kwawu, J, Harris, D, Pow-Sang, J, Yamoah, K, Cleveland, JL, Awasthi, S, Rounbehler, RJ, Gerke, T, Dhillon, J, Eeles, R, Kote-Jarai, Z, Muir, K, Schleutker, J, Pashayan, N, Neal, DE, Nielsen, SF, Nordestgaard, BG, Gronberg, H, Wiklund, F, Giles, GG, Haiman, CA, Travis, RC, Stanford, JL, Kibel, AS, Cybulski, C, Khaw, K-T, Maier, C, Thibodeau, SN, Teixeira, MR, Cannon-Albright, L, Brenner, H, Kaneva, R, Pandha, H, Srinivasan, S, Clements, J, Batra, J, and Park, JY
- Abstract
Risk classification for prostate cancer (PCa) aggressiveness and underlying mechanisms remain inadequate. Interactions between single nucleotide polymorphisms (SNPs) may provide a solution to fill these gaps. To identify SNP-SNP interactions in the four pathways (the angiogenesis-, mitochondria-, miRNA-, and androgen metabolism-related pathways) associated with PCa aggressiveness, we tested 8587 SNPs for 20,729 cases from the PCa consortium. We identified 3 KLK3 SNPs, and 1083 (P < 3.5 × 10-9) and 3145 (P < 1 × 10-5) SNP-SNP interaction pairs significantly associated with PCa aggressiveness. These SNP pairs associated with PCa aggressiveness were more significant than each of their constituent SNP individual effects. The majority (98.6%) of the 3145 pairs involved KLK3. The 3 most common gene-gene interactions were KLK3-COL4A1:COL4A2, KLK3-CDH13, and KLK3-TGFBR3. Predictions from the SNP interaction-based polygenic risk score based on 24 SNP pairs are promising. The prevalence of PCa aggressiveness was 49.8%, 21.9%, and 7.0% for the PCa cases from our cohort with the top 1%, middle 50%, and bottom 1% risk profiles. Potential biological functions of the identified KLK3 SNP-SNP interactions were supported by gene expression and protein-protein interaction results. Our findings suggest KLK3 SNP interactions may play an important role in PCa aggressiveness.
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- 2021
7. PCN21 AFRICAN AMERICAN MEN WITH LOW RISK PROSTATE CANCER IN MIDLIFE ARE ASSOCIATED WITH HIGHER RISK OF GLEASON UPGRADING
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Awasthi, S., primary, Mahal, B., additional, Creed, J., additional, Williams, V., additional, Fink, A.K., additional, Zgibor, J., additional, Pow-Sang, J., additional, Park, J., additional, Gerke, T., additional, and Yamoah, K., additional
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- 2020
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8. Sulfur chemistry, biofilm, and the (in)direct attack mechanism — a critical evaluation of bacterial leaching
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Sand, W., Gerke, T., Hallmann, R., and Schippers, A.
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- 1995
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9. Peer Review #1 of "Radiation dose-response (a Bayesian model) in the radiotherapy of the localized prostatic adenocarcinoma: the reliability of PSA slope changes as a response surrogate endpoint (v0.1)"
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Gerke, T, additional
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- 2019
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10. Prostate-specific antigen (PSA) levels in men 60 to 70 years of age predict aggressive prostate cancer in the PLCO cancer screening trial: Implications for risk-stratified screening
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Berger, A., primary, Aden-Buie, G., additional, Kibel, A.S., additional, Mucci, L.A., additional, Penney, K., additional, Wilson, K., additional, Gerke, T., additional, and Preston, M., additional
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- 2019
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11. A polymorphism in the promoter of the FRAS1 gene is associated with metastatic prostate cancer
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Sweeney, C.J., primary, Geybels, M., additional, Coseo-Markt, S., additional, Wang, V., additional, Penney, K., additional, Gerke, T., additional, Pomerantz, M.M., additional, Lee, G-S.M., additional, Nitsch, D., additional, Huttenhower, C., additional, and Mucci, L., additional
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- 2017
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12. Do more granular Gleason categorizations lead to better prognostic accuracy over time?
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Fankhauser, C., primary, Wilson, K., additional, Rider, J., additional, Penney, K., additional, Peisch, S., additional, Fiorentino, M., additional, Kantoff, P., additional, Moch, H., additional, Mucci, L., additional, and Gerke, T., additional
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- 2017
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13. 1126 - Prostate-specific antigen (PSA) levels in men 60 to 70 years of age predict aggressive prostate cancer in the PLCO cancer screening trial: Implications for risk-stratified screening
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Berger, A., Aden-Buie, G., Kibel, A.S., Mucci, L.A., Penney, K., Wilson, K., Gerke, T., and Preston, M.
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- 2019
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14. Prostate cancer (PCa) risk variants and risk of fatal PCa in the national cancer institute breast and prostate cancer cohort consortium
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Shui, IM, Lindström, S, Kibel, AS, Berndt, SI, Campa, D, Gerke, T, Penney, KL, Albanes, D, Berg, C, Bueno-De-Mesquita, HB, Chanock, S, Crawford, ED, Diver, WR, Gapstur, SM, Gaziano, JM, Giles, GG, Henderson, B, Hoover, R, Johansson, M, Le Marchand, L, Ma, J, Navarro, C, Overvad, K, Schumacher, FR, Severi, G, Siddiq, A, Stampfer, M, Stevens, VL, Travis, RC, Trichopoulos, D, Vineis, P, Mucci, LA, Yeager, M, Giovannucci, E, and Kraft, P
- Subjects
Male ,Oncology ,medicine.medical_specialty ,Genotype ,Genetic epidemiology ,Prostate cancer ,Prostate cancer mortality ,Risk single nucleotide polymorphisms ,Urology ,urologic and male genital diseases ,Polymorphism, Single Nucleotide ,Risk Assessment ,White People ,Article ,Internal medicine ,Epidemiology of cancer ,Biomarkers, Tumor ,medicine ,Humans ,Registries ,Alleles ,Aged ,Proportional Hazards Models ,Proportional hazards model ,business.industry ,Australia ,Case-control study ,Prostatic Neoplasms ,Middle Aged ,medicine.disease ,United States ,Europe ,Case-Control Studies ,Cohort ,Risk assessment ,business - Abstract
Background Screening and diagnosis of prostate cancer (PCa) is hampered by an inability to predict who has the potential to develop fatal disease and who has indolent cancer. Studies have identified multiple genetic risk loci for PCa incidence, but it is unknown whether they could be used as biomarkers for PCa-specific mortality (PCSM). Objective To examine the association of 47 established PCa risk single-nucleotide polymorphisms (SNPs) with PCSM. Design, setting, and participants We included 10 487 men who had PCa and 11 024 controls, with a median follow-up of 8.3 yr, during which 1053 PCa deaths occurred. Outcome measurements and statistical analysis The main outcome was PCSM. The risk allele was defined as the allele associated with an increased risk for PCa in the literature. We used Cox proportional hazards regression to calculate the hazard ratios of each SNP with time to progression to PCSM after diagnosis. We also used logistic regression to calculate odds ratios for each risk SNP, comparing fatal PCa cases to controls. Results and limitations Among the cases, we found that 8 of the 47 SNPs were significantly associated (p < 0.05) with time to PCSM. The risk allele of rs11672691 (intergenic) was associated with an increased risk for PCSM, while 7 SNPs had risk alleles inversely associated (rs13385191 [C2orf43], rs17021918 [PDLIM5], rs10486567 [JAZF1], rs6465657 [LMTK2], rs7127900 (intergenic), rs2735839 [KLK3], rs10993994 [MSMB], rs13385191 [C2orf43]). In the case-control analysis, 22 SNPs were associated (p < 0.05) with the risk of fatal PCa, but most did not differentiate between fatal and nonfatal PCa. Rs11672691 and rs10993994 were associated with both fatal and nonfatal PCa, while rs6465657, rs7127900, rs2735839, and rs13385191 were associated with nonfatal PCa only. Conclusions Eight established risk loci were associated with progression to PCSM after diagnosis. Twenty-two SNPs were associated with fatal PCa incidence, but most did not differentiate between fatal and nonfatal PCa. The relatively small magnitudes of the associations do not translate well into risk prediction, but these findings merit further follow-up, because they may yield important clues about the complex biology of fatal PCa. Patient summary In this report, we assessed whether established PCa risk variants could predict PCSM. We found eight risk variants associated with PCSM: One predicted an increased risk of PCSM, while seven were associated with decreased risk. Larger studies that focus on fatal PCa are needed to identify more markers that could aid prediction. © 2013 European Association of Urology.
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- 2014
15. Spatially Shaped Laser Scribing of Thin Film Photovoltaic Solar Cells Using Flexible Pulsewidth Nanosecond and Picosecond Master Oscillator Fiber Power Amplifier Systems
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Baird, B. and Gerke, T.
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THIN FILM SOLAR CELLS ,CdTe, CIS and Related Ternary and Quaternary Thin Film Solar Cells - Abstract
28th European Photovoltaic Solar Energy Conference and Exhibition; 2467-2469, Innovation in laser processing methods and laser processing system architectures are required to help drive improvements in thin film photovoltaic (PV) device efficiencies and contribute to reductions of device manufacturing costs [1,2]. Laser scribes produced by conventional Gaussian beam laser processing using nanosecond lasers of thin film a-Si and CdTe devices often display sidewall non-uniformities, cracking, residual debris, and heat affected zones. These undesirable effects often adversely impact device efficiencies, device yield, and ultimately device manufacturing costs. Recent work has demonstrated that employment of picosecond lasers and shaped beam techniques can provide improved scribe quality [3, 4. 5]. In this work, we evaluate two shaped beam techniques for P1, P2 and P3 laser scribing of thin film a-Si and CdTe photovoltaic devices using 1064 nm and 532 nm flexible pulsewidth nanosecond and picosecond master oscillator fiber power amplifier (MOFPA) laser systems. Improvements in the spatial uniformity of the laser scribing process offer an attractive approach to meeting the industry’s demands for more robust, efficient, and cost effective thin film photovoltaic laser processing methods.
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- 2013
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16. Racial Disparities in Prostate Cancer Mortality Rates Partially Explained By Differences in Dietary and Lifestyle Factors.
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Sodipo, M. O., Rencsok, E., Russo, R. G., Peisch, S. F., Gerke, T., Giovannucci, E. L., Stopsack, K. H., and Mucci, L. A.
- Abstract
Introduction: Black individuals have 2.1 times higher prostate cancer mortality rates than White individuals in the United States. Several dietary and lifestyle factors may influence the risk of lethal prostate cancer. This study evaluated to what extent differences in the prevalence of these modifiable risk factors by race could explain racial disparities in prostate cancer mortality. Methods: We compared the prevalence of seven potentially modifiable risk factors for lethal prostate cancer among Black and White individuals, using the National Health and Nutrition Examination Study at two time points (1988-1994; 2017-2018). Relative risks for lethal prostate cancer were estimated in the Health Professionals Follow-up Study. We calculated the population attributable fraction (PAF) for each factor by self-identified race, defined as the reduction in mortality that would be achieved if the population had been entirely unexposed, compared with the current exposure pattern. We also calculated the difference in the PAF between Black and White individuals, assuming causality of risk factors and no multiplicative effect measure modification by race. Results: Based on data from NHANES III (1988-1994), the largest prevalence differences between Black and White individuals were for vitamin D deficiency, current smoking, and coffee, respectively. Elimination of these risk factors among Black individuals could have led to a larger reduction in lethal prostate cancer in comparison to eliminating these same risk factors among White individuals. Given the prevalence of these risk factors in 2017-2018, current interventions on vitamin D deficiency, current smoking, and coffee could influence future PAF differences for lethal prostate cancer mortality among Black individuals compared to White individuals. Conclusions: Differences in the prevalence of some modifiable lifestyle and dietary factors are potentially responsible for a portion of the racial disparity in prostate cancer mortality. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Pulsewidth Dependence of Laser Scribing of Transparent Conductive Oxides in the Picosecond Regime
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Baird, B. and Gerke, T.
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Thin Film Solar Cells ,CdTe, CIS and Related Ternary and Quaternary Thin Film Solar Cells - Abstract
27th European Photovoltaic Solar Energy Conference and Exhibition; 2356-2358, Continuous improvement and innovation in laser processing methods and laser architectures are needed to further improve device efficiencies and reduce overall device manufacturing costs. In particular, P1 and P3 laser scribes of transparent conductive oxide layers, such as F:SnO2 or Al:ZnO (AZO) employed in thin film solar cell devices conventionally have been processed by Q-switched diode-pumped solid state lasers (DPSS) operating in the nanosecond regime. The principal wavelength employed for F:SnO2 scribing has been in the near infrared at or near 1064 nm while AZO has also been widely scribed at harmonic wavelengths, including in the near ultraviolet at or near 355 nm. Scribes produced with these laser systems often display undesirable sidewall non-uniformities, heat affected zones, film lift off, cracking, and excessive residual debris. Further, Q-switched DPSS laser architectures face scaling challenges as improvements in beam positioning technology demand laser performance at pulse repetition frequencies substantially higher than 200 KHz in order to keep pace with improvements in beam positioning speed and overall system throughput requirements. In addition, the lifetime and reliability of Q-switched ultraviolet DPSS lasers are well-known to be negatively impacted by the high photon energy in comparison to comparable pulse energy infrared laser systems. Recently, substantial work has been performed to investigate the effectiveness of sub-nanonsecond lasers on key laser scribing processes, including P1 molybdenum and P2 and P3 CdTe and a-Si scribes. In this work, we extend these investigations to evaluate the pulsewidth dependence of TCO laser scribe process performance and quality produced by 1064 nm master oscillator fiber power amplifier (MOFPA) laser systems in the picosecond regime.
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- 2012
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18. P2 and P3 Spatially Shaped Laser Scribing of CdTe and a-Si Thin Film Solar Cells Using a 532 nm Picosecond MOFPA
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Baird, B., Gerke, T., and Wieland, K.
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Thin Film Solar Cells ,Amorphous and Microcrystalline Silicon Solar Cells - Abstract
26th European Photovoltaic Solar Energy Conference and Exhibition; 2471-2474, Improved P2 and P3 scribing of thin film a-Si and CdTe solar cells are demonstrated using a 532 nm picosecond fiber laser with a square flat-top shaped beam profile at the work surface. The shaped beam profile optimizes the application of the available pulse energy and results in significantly faster scribe rates than achievable with Gaussian profiles. The uniform application of the fluence also improves scribe quality. The sidewalls are extremely straight and sharp and the absorber material is completely and uniformly removed from the underlying TCO with no damage to the TCO itself. Defects like cracking of the substrate or absorber edges, or peeling of the metal contacts are eliminated by the sharp profile edges of the flat-top beam and single pulse material removal.
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- 2011
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19. Molecular differences in transition zone and peripheral zone prostate tumors
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Sinnott, J. A., primary, Rider, J. R., additional, Carlsson, J., additional, Gerke, T., additional, Tyekucheva, S., additional, Penney, K. L., additional, Sesso, H. D., additional, Loda, M., additional, Fall, K., additional, Stampfer, M. J., additional, Mucci, L. A., additional, Pawitan, Y., additional, Andersson, S.-O., additional, and Andren, O., additional
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- 2015
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20. 821P - A polymorphism in the promoter of the FRAS1 gene is associated with metastatic prostate cancer
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Sweeney, C.J., Geybels, M., Coseo-Markt, S., Wang, V., Penney, K., Gerke, T., Pomerantz, M.M., Lee, G-S.M., Nitsch, D., Huttenhower, C., and Mucci, L.
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- 2017
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21. 'Wissensraum Architektur'– A Constructivist Model of Learning for Architectural Education at Anhalt University of Applied Sciences
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Pinkau, S. and Gerke, T.
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The study of architecture is by nature highly interdisciplinary. Design, structure, technology, ecology and economics must all be considered in the process of planning and building. Therefore it is important to encourage an integrated approach in terms of education and to create a interdisciplinary network of learning contents. Wissensraum Architektur is a contribution to this idea. Wissensraum Architektur is an internet-based system for teaching and learning at the Department of Architecture and Civil Engineering at Anhalt University of Applied Sciences in Dessau. The basis of Wissensraum is a pool of media elements and multimedia based components to which authors from different fields contribute. The authoring system allows instructors to create, by simple means, digital learning modules. Due to the modular structure, modular elements and sequences in varying relations and by different authors can be reused and restructured. A knowledge map visualizes relationships among the different learning content. In this way, a virtual campus in Dessau is created step by step. The didactical concept of Wissensraum supports Constructivist models of learning. Users can use the database for research and can create their own way of learning concerning particular themes. The availability via Internet makes it possible to work from any location at any time.
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- 2007
22. 881 - Do more granular Gleason categorizations lead to better prognostic accuracy over time?
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Fankhauser, C., Wilson, K., Rider, J., Penney, K., Peisch, S., Fiorentino, M., Kantoff, P., Moch, H., Mucci, L., and Gerke, T.
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- 2017
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23. Can Dynamic Bubble Templating Play a Role in Corrosion Product Morphology?
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NAVAL RESEARCH LAB STENNIS DETACHMENT STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Gerke, T L, Scheckel, Kirk G, Ray, Richard I, Little, Brenda J, NAVAL RESEARCH LAB STENNIS DETACHMENT STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Gerke, T L, Scheckel, Kirk G, Ray, Richard I, and Little, Brenda J
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Dynamic templating as a result of cathodic hydrogen gas production is suggested as a possible mechanism for the formation of tube-like corrosion products on an unlined cast iron pipe in a drinking water distribution system. Mounds of corrosion product, with protruding tubes and freestanding tubes, were observed within a single 30 cm section of piping. Internal morphologies for all shapes were texturally complex although mineralogically simple, composed of two iron oxide/oxyhydroxides minerals: alpha-FeOOH (goethite) and Fe304 (magnetite). Static templating by either microorganisms or minerals was rejected as a possible mechanism for tube formation in this study.
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- 2012
24. The Anatomy of Tubercles on Steel
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NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Ray, R. I., Lee, J. S., Little, B. J., Gerke, T. L., NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Ray, R. I., Lee, J. S., Little, B. J., and Gerke, T. L.
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The chemistry, mineralogy and microbiology of tubercles on cast iron and carbon steel were investigated. Tubercles, from diverse fresh water environments and of varying ages, consistently had an outer crust of goethite and lepidocrocite and an inner shell of magnetite. Core regions differed in structure, composition and chemistry. The presence of tubercles on carbon steel and cast iron cannot be used to conclude localized corrosion directly under the tubercles or a role for bacteria in their formation., Published in Nace International Corrosion Conference & Expo, paper no. 11217 p1-11, 2011.
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- 2011
25. Tubercles and Localized Corrosion on Carbon Steel
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NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Little, B. J., Ray, R. I., Lee, J. S., Gerke, T. L., NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Little, B. J., Ray, R. I., Lee, J. S., and Gerke, T. L.
- Abstract
The chemistry, mineralogy and microbiology of tubercles on cast iron and carbon steel were investigated. Tubercles, from diverse fresh water environments and of varying ages, consistently had an outer crust of goethite and lepidocrocite and an inner shell of magnetite. Core regions differed in structure, composition and chemistry. The presence of tubercles on carbon steel and cast iron cannot be used to conclude localized corrosion directly under the tubercles or a role for bacteria in their formation., Sponsored in part by USACE, Detroit District.
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- 2011
26. The Anatomy of Tubercles: A Corrosion Study in a Fresh Water Estury
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NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Ray, Richard I., Lee, Jason S., Little, Brenda J., Gerke, T. L., NAVAL RESEARCH LAB STENNIS SPACE CENTER MS OCEANOGRAPHY DIV, Ray, Richard I., Lee, Jason S., Little, Brenda J., and Gerke, T. L.
- Abstract
The structure and mineralogy of corrosion products formed on carbon steel coupons exposed in Duluth Superior Harbor (DSH. USA), were investigated and compared with corrosion products on similar substrata from other locations. Corrosion products in DSH form within a few months each year and are removed by ice scour and reform. The corrosion products formed in DSH are tubercles with an outer surface, an inner shell of magnetite, and a core of iron(lll) oxyhydroxides. goethite. and lepidocrocite. in association with stalks produced by bacteria. In general, the tubercles formed in DSH are similar in morphology and mineralogy to corrosion products described for carbon steel and cast iron exposed to treated waters in decades-old drinking water and cooling water systems DSH tubercles are unique in several structural details DSH tubercles increase areal coverage of the substratum by consolidation of tubercles. Furthermore, the core material extends into the pit and is an exact replica of the pit profile., Published in Materials and Corrosion, v61 n12 p993-999, 2010. Work no. 73-9576-10-0254
- Published
- 2010
27. The anatomy of tubercles: A corrosion study in a fresh water estuary
- Author
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Ray, R. I., primary, Lee, J. S., additional, Little, B. J., additional, and Gerke, T. L., additional
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- 2010
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28. Imaging of the power distribution of a circular oversized waveguide with a Josephson cantilever at 762 GHz
- Author
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Brendel, C, primary, Stewing, F, additional, Gerke, T, additional, and Schilling, M, additional
- Published
- 2009
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29. Development of a Power Net simulation tool using SABER®
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Boulos, A M, primary, Pickering, S R, additional, Gerke, T, additional, and Burnham, K J, additional
- Published
- 2007
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30. Spectral and temporal speckle field measurements of a random medium
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Webster, M. A., primary, Gerke, T. D., additional, Weiner, A. M., additional, and Webb, K. J., additional
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- 2004
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31. Random and ensemble optical fields from scattering media using frequency-resolved interferometer measurements
- Author
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Gerke, T. D., primary, Webster, M. A., additional, Weiner, A. M., additional, and Webb, K J., additional
- Published
- 2004
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32. Butyrate Inhibits NF-κB Activation in Lamina Propria Macrophages of Patients with Ulcerative Colitis
- Author
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Lührs, H., primary, Gerke, T., additional, Müller, J. G., additional, Melcher, R., additional, Schauber, J., additional, Boxberger, F., additional, Scheppach, W., additional, and Menzel, T., additional
- Published
- 2002
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- View/download PDF
33. An XML- and log-based infrastructure for evaluating and teaching spatio-temporal indexing schemes.
- Author
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Becker, L., Gerke, T., Hinrichs, K., Hausmann, T.S.N., and Vahrenhold, J.
- Published
- 2004
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34. Can Dynamic Bubble Templating Play a Role in Corrosion Product Morphology?
- Author
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Gerke, T. L., Scheckel, K. G., Ray, R. I., and Little, B. J.
- Subjects
HYDROGEN ,DRINKING water ,WATER distribution ,IRON pipe ,AQUATIC microbiology - Abstract
Dynamic templating as a result of cathodic hydrogen gas production is suggested as a possible mechanism for the formation of tube-like corrosion products on an unlined cast iron pipe in a drinking water distribution system. Mounds of corrosion product, with protruding tubes and freestanding tubes, were observed within a single 30 cm section of piping. Internal morphologies for all shapes were texturally complex although mineralogically simple, composed of two iron oxide/oxyhydroxides minerals: α-FeOOH (goethite) and Fe
4 O4 (magnetite). Static templating by either microorganisms or minerals was rejected as a possible mechanism for tube formation in this study. [ABSTRACT FROM AUTHOR]- Published
- 2012
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35. Butyrate inhibits interleukin-1-mediated nuclear factor-kappa B activation in human epithelial cells.
- Author
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Lũhrs, Hardi, Gerke, Tobias, Boxberger, Frank, Backhaus, Kerstin, Melcher, Ralf, Scheppach, Wolfgang, Menzel, Thomas, Lührs, H, Gerke, T, Boxberger, F, Backhaus, K, Melcher, R, Scheppach, W, and Menzel, T
- Subjects
BUTYRIC acid ,CELLS ,CHROMOSOME abnormalities ,COMPARATIVE studies ,IMMUNOHISTOCHEMISTRY ,INTERLEUKIN-1 ,RESEARCH methodology ,MEDICAL cooperation ,PHOSPHORYLATION ,RESEARCH ,DNA-binding proteins ,EVALUATION research - Abstract
Nuclear factor-kappa B (NF-kappaB) is a critical transcription factor for the inducible expression of multiple genes involved in inflammation. NF-kappaB is sequestered in the cytoplasm by inhibitory IkappaB proteins. Extracellular stimuli, notably interleukin-1beta (IL-1beta) and tumor necrosis factor alpha (TNF-alpha) activate NF-kappaB nuclear translocation via IkappaB phosphorylation and degradation. Since previous reports suggest that the short chain fatty acid butyrate has antiinflammatory properties, the effects of butyrate on NF-kappaB nuclear translocation in human epithelial cells (HeLa229) were tested. In cells pretreated with butyrate, a time- and dose-dependent inhibition of IL-1beta-mediated NF-kappaB nuclear translocation was observed. However, IkappaB alpha phosphorylation and degradation occurred rapidly in both butyrate pretreated and nonpretreated cells, respectively. These data indicate that inhibition of IL-1beta-induced NF-kappaB activation by butyrate does not require an intact IkappaB alpha protein. [ABSTRACT FROM AUTHOR]
- Published
- 2001
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36. Mode of occurrence, treatment, and monitoring significance of tetravalent lead
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Schock, M. R., Kirk Scheckel, Desantis, M., and Gerke, T.
37. Iron drinking water pipe corrosion products: Concentrators of toxic metals
- Author
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Gerke, T. L., James Maynard, Luxton, T. P., Scheckel, K. G., and Little, B. J.
38. ChemInform Abstract: POLYACETYLENIC COMPOUNDS. 266. NEW C17 ACETYLENIC COMPOUNDS FROM SOLIDAGO SPATHULATA DC
- Author
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BOHLMANN, F., primary, GERKE, T., additional, KING, R. M., additional, and ROBINSON, H., additional
- Published
- 1983
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39. ChemInform Abstract: NEW SESQUITERPENE LACTONES AND ROSANE DERIVATIVES FROM TRICHOGONIA SPECIES
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BOHLMANN, F., primary, ZDERO, C., additional, JAKUPOVIC, J., additional, GERKE, T., additional, WALLMEYER, M., additional, KING, R. M., additional, and ROBINSON, H., additional
- Published
- 1984
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40. Chiral substituierte Schwefelfluoride
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Kr�gerke, T., primary and Seppelt, K., additional
- Published
- 1984
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41. ChemInform Abstract: POLYACETYLENIC COMPOUNDS. 269. NEW N‐ISOBUTYLAMIDES FROM HELIOPSIS SPECIES
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BOHLMANN, F., primary, GERKE, T., additional, AHMED, M., additional, KING, R. M., additional, and ROBINSON, H., additional
- Published
- 1983
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42. IRONMAN: A Novel International Registry of Men With Advanced Prostate Cancer
- Author
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Mucci, Lorelei A., Jacob Vinson, Theresa Gold, Travis Gerke, Julie Filipenko, Green, Rebecca M., Anderson, Simon G., Simone Badal, Anders Bjartell, Chi, Kim N., Davis, Ian D., Deborah Enting, Fay, André P., John Lazarus, Joaquin Mateo, Ray McDermott, Odedina, Folakemi T., David Olmos, Aurelius Omlin, Ademola Popoola, Camille Ragin, Robin Roberts, Russnes, Kjell M., Charles Waihenya, Stopsack, Konrad H., Terry Hyslop, Paul Villanti, Kantoff, Philip W., George, Daniel J., Institut Català de la Salut, [Mucci LA] Harvard T.H. Chan School of Public Health, Boston, USA. [Vinson J, Gold T, Gerke T, Filipenko J, Green RM] Prostate Cancer Clinical Trials Consortium, New York, USA. [Mateo J] Vall d’Hebron Institute of Oncology (VHIO), Barcelona, Spain, and Vall d'Hebron Barcelona Hospital Campus
- Subjects
Male ,técnicas de investigación::métodos epidemiológicos::recopilación de datos::sistema de registros [TÉCNICAS Y EQUIPOS ANALÍTICOS, DIAGNÓSTICOS Y TERAPÉUTICOS] ,Cancer Research ,Otros calificadores::Otros calificadores::/farmacoterapia [Otros calificadores] ,Pròstata - Càncer - Tractament ,Other subheadings::Other subheadings::/drug therapy [Other subheadings] ,Neoplasms::Neoplasms by Site::Urogenital Neoplasms::Genital Neoplasms, Male::Prostatic Neoplasms::Prostatic Neoplasms, Castration-Resistant [DISEASES] ,Investigative Techniques::Epidemiologic Methods::Data Collection::Registries [ANALYTICAL, DIAGNOSTIC AND THERAPEUTIC TECHNIQUES, AND EQUIPMENT] ,Cohort Studies ,Registres mèdics ,Prostatic Neoplasms, Castration-Resistant ,Oncology ,Spain ,neoplasias::neoplasias por localización::neoplasias urogenitales::neoplasias de los genitales masculinos::neoplasias de la próstata::neoplasias prostáticas resistentes a la castración [ENFERMEDADES] ,Humans ,Prospective Studies ,Registries - Abstract
PURPOSE To describe a newly established international registry recruiting diverse patients with advanced prostate cancer across academic and community practices to address unmet needs in this population. PATIENTS AND METHODS Initiated in 2017, IRONMAN (International Registry for Men with Advanced Prostate Cancer) is a prospective cohort of patients with advanced prostate cancer. The study will enroll 5,000 patients with metastatic hormone-sensitive prostate cancer (mHSPC) or castration-resistant prostate cancer (CRPC), recruited from Australia, the Bahamas, Barbados, Brazil, Canada, Ireland, Jamaica, Kenya, Nigeria, Norway, South Africa, Spain, Sweden, Switzerland, the United Kingdom, and the United States. The study is collecting datatypes to study variation in care and treatment of advanced prostate cancer across countries and across academic, community-based, and government practices with a focus on clinical outcomes, patient-reported outcomes, epidemiologic data, biologic subtypes, and clinician questionnaires. RESULTS Through July 2022, 2,682 eligible patients were enrolled in 11 of 12 active countries. Sixty-six percent of patients have mHSPC, and 34% have CRPC. On the basis of self-report, 11% of patients are Black and 9% are Hispanic. Five Veterans Affairs Medical Centers are enrolling patients. Globally, 23% of patients report being veterans of military service. CONCLUSION To our knowledge, this is the first international cohort of people newly diagnosed with advanced prostate cancer designed to describe variations in patient management, experiences, and outcomes. IRONMAN aims to identify optimal treatment sequences to improve survival, understand patient-reported outcomes, and explore novel biomarkers to understand treatment resistance mechanisms. Insights from IRONMAN will inform and guide future clinical management of people with mHSPC and CRPC. This cohort study will provide real-world evidence to facilitate a better understanding of the survivorship of people with advanced prostate cancer.
- Published
- 2022
43. Tumor protein expression of the DNA repair gene BRCA1 and lethal prostate cancer
- Author
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Lorelei A. Mucci, Andreas Pettersson, Travis Gerke, Stephen P. Finn, Konrad H. Stopsack, Meir J. Stampfer, Massimo Loda, Michelangelo Fiorentino, Ericka M. Ebot, Dipanjan Chowdhury, Philip W. Kantoff, Piotr Zareba, Richard Flavin, Stopsack K.H., Gerke T., Zareba P., Pettersson A., Chowdhury D., Ebot E.M., Flavin R., Finn S., Kantoff P.W., Stampfer M.J., Loda M., Fiorentino M., and Mucci L.A.
- Subjects
0301 basic medicine ,Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,DNA Repair ,Aneuploidy ,Neoplasms, Bone Tissue ,Disease ,Metastasis ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Internal medicine ,Biomarkers, Tumor ,Medicine ,Humans ,Neoplasm Metastasis ,Prospective cohort study ,Cancer Biomarkers and Molecular Epidemiology ,Aged ,Tissue microarray ,business.industry ,BRCA1 Protein ,Hazard ratio ,Prostatic Neoplasms ,General Medicine ,Middle Aged ,medicine.disease ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,immunohistochemistry aneuploidy brca1 protein brca1 gene ki-67 antigen neoplasm metastasis diagnosis neoplasms metastatic prostate cancer prostate cancer gleason grading system for prostatic cancer dna repair gene ,030220 oncology & carcinogenesis ,Mutation ,Disease Progression ,Immunohistochemistry ,Neoplasm Grading ,business ,Follow-Up Studies - Abstract
DNA repair genes are commonly altered in metastatic prostate cancer, but BRCA1 mutations are rare. Preliminary studies suggest that higher tumor expression of the BRCA1 protein may be associated with worse prognosis. We undertook a prospective study among men with prostate cancer in the Health Professionals Follow-up Study and evaluated BRCA1 via immunohistochemical staining on tissue microarrays. BRCA1 was expressed in 60 of 589 tumors. Prevalence of BRCA1 positivity was 43% in the 14 men with metastases at diagnosis compared with 9% in non-metastatic tumors [difference, 33 percentage points; 95% confidence interval (CI), 7–59]. BRCA1-positive tumors had 2.16-fold higher Ki-67 proliferative indices (95% CI, 1.18–3.95), higher tumor aneuploidy as predicted from whole-transcriptome profiling, and higher Gleason scores. Among the 575 patients with non-metastatic disease at diagnosis, we evaluated the association between BRCA1 expression and development of lethal disease (metastasis or cancer-specific death, 69 events) during long-term follow-up (median, 18.3 years). A potential weak association of BRCA1 positivity with lethal disease (hazard ratio, 1.61; 95% CI, 0.82–3.15) was attenuated when adjusting for age, Gleason score and clinical stage (hazard ratio, 1.11; 95% CI, 0.54–2.29). In summary, BRCA1 protein expression is a feature of more proliferative and more aneuploid prostate tumors and is more common in metastatic disease. While not well suited as a prognostic biomarker in primary prostate cancer, BRCA1 protein expression may be most relevant in advanced disease.
- Published
- 2020
44. Stress-Related Signaling Pathways in Lethal and Nonlethal Prostate Cancer
- Author
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Kathryn M. Wilson, Mats Lambe, Lorelei A. Mucci, Edward Giovannucci, Massimo Loda, Michelangelo Fiorentino, Svitlana Tyekucheva, Travis Gerke, Donghao Lu, Fang Fang, Christopher Sweeney, Unnur Valdimarsdóttir, Howard D. Sesso, Jennifer A. Sinnott, Katja Fall, Lu, D, Sinnott, Ja, Valdimarsdóttir, U, Fang, F, Gerke, T, Tyekucheva, S, Fiorentino, Michelangelo, Lambe, M, Sesso, Hd, Sweeney, Cj, Wilson, Km, Giovannucci, El, Loda, M, Mucci, La, and Fall, K.
- Subjects
Male ,0301 basic medicine ,Serotonin ,Cancer Research ,medicine.medical_specialty ,Angiogenesis ,Perineural invasion ,Adrenergic ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Stress, Physiological ,Prostate ,Internal medicine ,Biomarkers, Tumor ,medicine ,Humans ,Glucocorticoids ,Aged ,Neoplasm Staging ,Neovascularization, Pathologic ,business.industry ,Prostatic Neoplasms ,Cancer ,Middle Aged ,medicine.disease ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,Endocrinology ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Neoplasm Grading ,Signal transduction ,business ,Prostate cancer, lethality ,Glucocorticoid ,Follow-Up Studies ,Signal Transduction ,medicine.drug - Abstract
Purpose: Recent data suggest that neuroendocrine signaling may influence progression in some cancers. We aimed to determine whether genes within the five major stress-related signaling pathways are differentially expressed in tumor tissue when comparing prostate cancer patients with lethal and nonlethal disease. Experimental Design: We measured mRNA expression of 51 selected genes involved in predetermined stress-related signaling pathways (adrenergic, glucocorticoid, dopaminergic, serotoninergic, and muscarinic systems) in tumor tissue and normal prostate tissue collected from prostate cancer patients in the Physicians' Health Study (n = 150; n = 82 with normal) and the Health Professionals Follow-Up Study (n = 254; n = 120 with normal). We assessed differences in pathway expression in relation to prostate cancer lethality as the primary outcome and to biomarkers as secondary outcomes. Results: Differential mRNA expression of genes within the adrenergic (P = 0.001), glucocorticoid (P < 0.0001), serotoninergic (P = 0.0019), and muscarinic (P = 0.0045) pathways in tumor tissue was associated with the risk of lethality. The adrenergic pathway was also statistically significant (P = 0.001) when comparing against differential expression of genes not involved in the pathways. In adjacent normal prostate tissue, none of the pathways was clearly differentially expressed between lethal and nonlethal prostate cancer. The glucocorticoid and adrenergic pathways were associated with cell proliferation, while the glucocorticoid pathway was additionally associated with angiogenesis and perineural invasion. Conclusions: Our study suggests that stress-related signaling pathways, particularly the adrenergic and glucocorticoid, may be dysregulated in the tumors of men whose prostate cancer proves to be lethal, and motivates further investigation of these pathways in functional studies. Clin Cancer Res; 22(3); 765–72. ©2015 AACR.
- Published
- 2016
45. Tumor expression of adiponectin receptor 2 and lethal prostate cancer
- Author
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Stephen P. Finn, Edward Giovannucci, Travis Gerke, Jennifer A. Sinnott, Massimo Loda, Lorelei A. Mucci, Michelangelo Fiorentino, Kristina M. Jordahl, Rachel S. Kelly, Jennifer R. Rider, Rider JR, Fiorentino M, Kelly R, Gerke T, Jordahl K, Sinnott JA, Giovannucci EL, Loda M, Mucci LA, Finn S, and Transdisciplinary Prostate Cancer Partnership (ToPCaP).
- Subjects
PCA3 ,Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Apoptosis ,Original Manuscript ,Adiponectin receptor 2 prostate cancer ,Prostate cancer ,Internal medicine ,Biomarkers, Tumor ,Medicine ,Humans ,Obesity ,Prospective Studies ,Prospective cohort study ,Aged ,Cell Proliferation ,Aged, 80 and over ,Adiponectin receptor 2 ,Adiponectin ,Neovascularization, Pathologic ,business.industry ,Hazard ratio ,Prostatic Neoplasms ,General Medicine ,Middle Aged ,Prostate-Specific Antigen ,medicine.disease ,Fatty Acid Synthase, Type I ,Prostate-specific antigen ,Ki-67 Antigen ,Quartile ,Disease Progression ,Receptors, Adiponectin ,business - Abstract
To investigate the role of adiponectin receptor 2 (AdipoR2) in aggressive prostate cancer we used immunohistochemistry to characterize AdipoR2 protein expression in tumor tissue for 866 men with prostate cancer from the Physicians' Health Study and the Health Professionals Follow-up Study. AdipoR2 tumor expression was not associated with measures of obesity, pathological tumor stage or prostate-specific antigen (PSA) at diagnosis. However, AdipoR2 expression was positively associated with proliferation as measured by Ki-67 expression quartiles (P-trend < 0.0001), with expression of fatty acid synthase (P-trend = 0.001), and with two measures of angiogenesis (P-trend < 0.1). An inverse association was observed with apoptosis as assessed by the TUNEL assay (P-trend = 0.006). Using Cox proportional hazards regression and controlling for age at diagnosis, Gleason score, year of diagnosis category, cohort and baseline BMI, we identified a statistically significant trend for the association between quartile of AdipoR2 expression and lethal prostate cancer (P-trend = 0.02). The hazard ratio for lethal prostate cancer for the two highest quartiles, as compared to the two lowest quartiles, of AdipoR2 expression was 1.9 (95% confidence interval [CI]: 1.2-3.0). Results were similar when additionally controlling for categories of PSA at diagnosis and Ki-67 expression quartiles. These results strengthen the evidence for the role of AdipoR2 in prostate cancer progression.
- Published
- 2015
46. Measuring PI3K Activation: Clinicopathologic, Immunohistochemical, and RNA Expression Analysis in Prostate Cancer
- Author
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Lorelei A. Mucci, Philip W. Kantoff, Meir J. Stampfer, Stephen P. Finn, Michelangelo Fiorentino, Travis Gerke, Neil E. Martin, Massimo Loda, Ove Andrén, Jennifer A. Sinnott, Jan-Erik Johansson, Swen-Olof Andersson, Giuseppe Fedele, Edward C. Stack, Martin, Ne, Gerke, T, Sinnott, Ja, Stack, Ec, Andrén, O, Andersson, So, Johansson, Je, Fiorentino, Michelangelo, Finn, S, Fedele, G, Stampfer, M, Kantoff, Pw, Mucci, La, and Loda, M.
- Subjects
Male ,Cancer Research ,Article ,Cohort Studies ,Prostate cancer ,Phosphatidylinositol 3-Kinases ,Medicine ,Humans ,RNA, Neoplasm ,Molecular Biology ,PI3K/AKT/mTOR pathway ,Aged ,Prostate cancer, PI3K activation ,business.industry ,RNA ,Cancer ,Prostatic Neoplasms ,medicine.disease ,Immunohistochemistry ,Enzyme Activation ,Rna expression ,Oncology ,Cancer research ,Biomarker (medicine) ,Signal transduction ,business ,Signal Transduction - Abstract
Assessing the extent of PI3K pathway activity in cancer is vital to predicting sensitivity to PI3K-targeting drugs, but the best biomarker of PI3K pathway activity in archival tumor specimens is unclear. Here, PI3K pathway activation was assessed, in clinical tissue from 1,021 men with prostate cancers, using multiple pathway nodes that include PTEN, phosphorylated AKT (pAKT), phosphorylated ribosomal protein S6 (pS6), and stathmin. Based on these markers, a 9-point score of PI3K activation was created using the combined intensity of the 4-markers and analyzed its association with proliferation (Ki67), apoptosis (TUNEL), and androgen receptor (AR) status, as well as pathologic features and cancer-specific outcomes. In addition, the PI3K activation score was compared with mRNA expression profiling data for a large subset of men. Interestingly, those tumors with higher PI3K activation scores also had higher Gleason grade (P = 0.006), increased AR (r = 0.37; P < 0.001) and Ki67 (r = 0.24; P < 0.001), and decreased TUNEL (r = −0.12; P = 0.003). Although the PI3K activation score was not associated with an increased risk of lethal outcome, a significant interaction between lethal outcome, Gleason and high PI3K score (P = 0.03) was observed. Finally, enrichment of PI3K-specific pathways was found in the mRNA expression patterns differentiating the low and high PI3K activation scores; thus, the 4-marker IHC score of PI3K pathway activity correlates with features of PI3K activation. Implications: The relationship of this activation score to sensitivity to anti-PI3K agents remains to be tested but may provide more precision guidance when selecting patients for these therapies. Mol Cancer Res; 13(10); 1431–40. ©2015 AACR.
- Published
- 2015
47. Abiraterone, Olaparib, or Abiraterone + Olaparib in First-Line Metastatic Castration-Resistant Prostate Cancer with DNA Repair Defects (BRCAAway).
- Author
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Hussain M, Kocherginsky M, Agarwal N, Adra N, Zhang J, Paller CJ, Picus J, Reichert ZR, Szmulewitz RZ, Tagawa ST, Kuzel TM, Bazzi LA, Daignault-Newton S, Whang YE, Dreicer R, Stephenson RD, Rettig MB, Shevrin D, Gerke T, Chinnaiyan AM, and Antonarakis ES
- Subjects
- Humans, Male, Aged, Middle Aged, BRCA2 Protein genetics, BRCA1 Protein genetics, Ataxia Telangiectasia Mutated Proteins genetics, DNA Repair, Aged, 80 and over, Mutation, Biomarkers, Tumor genetics, Neoplasm Metastasis, Phthalazines administration & dosage, Phthalazines adverse effects, Phthalazines therapeutic use, Prostatic Neoplasms, Castration-Resistant drug therapy, Prostatic Neoplasms, Castration-Resistant genetics, Prostatic Neoplasms, Castration-Resistant pathology, Prostatic Neoplasms, Castration-Resistant mortality, Piperazines administration & dosage, Piperazines therapeutic use, Piperazines adverse effects, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Antineoplastic Combined Chemotherapy Protocols adverse effects, Androstenes administration & dosage, Androstenes therapeutic use, Androstenes adverse effects, Poly(ADP-ribose) Polymerase Inhibitors therapeutic use, Poly(ADP-ribose) Polymerase Inhibitors administration & dosage, Poly(ADP-ribose) Polymerase Inhibitors adverse effects
- Abstract
Purpose: Deleterious germline/somatic homologous recombination repair mutations (HRRm) are present in ∼25% of patients with metastatic castration-resistant prostate cancer (mCRPC). Preclinically, poly(ADP-ribose) polymerase (PARP) inhibition demonstrated synergism with androgen receptor pathway (ARP)-targeted therapy. This trial evaluated the efficacy of ARP inhibitor versus PARP inhibitor versus their combination as first-line therapy in patients with mCRPC with HRRms., Patients and Methods: BRCAAway is a biomarker preselected, randomized, phase 2 trial. Patients with BRCA1/2 and/or ATM alterations were randomized 1:1:1 to Arm1: abiraterone (1,000 mg)/prednisone (5 mg BID) (Abi/pred), Arm2: olaparib (300 mg BID) (Ola), or Arm3: abiraterone/prednisone + olaparib (Abi/pred + Ola). Single-agent arms could cross over at progression. Exploratory Arm4 patients with other HRRms received olaparib alone. The primary endpoint was progression-free survival (PFS), and secondary endpoints were objective response, PSA response, and safety., Results: Sixty-one of 165 eligible patients had BRCA1/2 or ATM mutations: median age: 67 (IQR, 62-73) years. Mutations: BRCA1 n = 3, BRCA2 n = 46, ATM n = 11, and multiple n = 1; 33 germline and 28 somatic mutations. Median PFS [95% confidence interval (CI)]: Abi/pred, 8.6 months (m; 2.9, 17), Ola, 14 m (8.4, 20), and Abi/pred + Ola, 39 m [22, not reached (NR)]. There were no G4/5 adverse events; 8/19 patients on Abi/pred treatment crossed over to Ola, and 8/21 vice versa. Median PFS (95% CI) from crossover: Ola-after-Abi/pred, 8.3 m (5.5, 15) and Abi/pred-after-Ola, 7.2 m (2.8, NR). Median PFS (95% CI) from randomization: Ola-after-Abi/pred, 16 m (7.8, 25) and Abi/pred-after-Ola, 16 m (11, NR). Seventeen of 165 patients with other HRRms received olaparib: median PFS (95% CI): 5.5 m (2, 11)., Conclusions: In patients with mCRPC with BRCA1/2 or ATM HRRm, Abi/pred + Ola was well tolerated and demonstrated longer PFS versus either agent alone or sequentially., (©2024 American Association for Cancer Research.)
- Published
- 2024
- Full Text
- View/download PDF
48. Marital Status, Living Arrangement, and Survival among Individuals with Advanced Prostate Cancer in the International Registry for Men with Advanced Prostate Cancer.
- Author
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Chen N, McGrath CB, Ericsson CI, Vaselkiv JB, Rencsok EM, Stopsack KH, Guard HE, Autio KA, Rathkopf DE, Enting D, Bitting RL, Mateo J, Githiaka CW, Chi KN, Cheng HH, Davis ID, Anderson SG, Badal SAM, Bjartell A, Russnes KM, Heath EI, Pomerantz MM, Henegan JC, Hyslop T, Esteban E, Omlin A, McDermott R, Fay AP, Popoola AA, Ragin C, Nowak J, Gerke T, Kantoff PW, George DJ, Penney KL, and Mucci LA
- Subjects
- Male, Humans, Aged, Marital Status, Registries, Europe, Social Support, Prostatic Neoplasms, Castration-Resistant
- Abstract
Background: Studies have shown improved survival among individuals with cancer with higher levels of social support. Few studies have investigated social support and overall survival (OS) in individuals with advanced prostate cancer in an international cohort. We investigated the associations of marital status and living arrangements with OS among individuals with advanced prostate cancer in the International Registry for Men with Advanced Prostate Cancer (IRONMAN)., Methods: IRONMAN is enrolling participants diagnosed with advanced prostate cancer (metastatic hormone-sensitive prostate cancer, mHSPC; castration-resistant prostate cancer, CRPC) from 16 countries. Participants in this analysis were recruited between July 2017 and January 2023. Adjusting for demographics and tumor characteristics, the associations were estimated using Cox regression and stratified by disease state (mHSPC, CRPC), age (<70, ≥70 years), and continent of enrollment (North America, Europe, Other)., Results: We included 2,119 participants with advanced prostate cancer, of whom 427 died during up to 5 years of follow-up (median 6 months). Two-thirds had mHSPC. Most were married/in a civil partnership (79%) and 6% were widowed. Very few married participants were living alone (1%), while most unmarried participants were living alone (70%). Married participants had better OS than unmarried participants [adjusted HR: 1.44; 95% confidence interval (CI): 1.02-2.02]. Widowed participants had the worst survival compared with married individuals (adjusted HR: 1.89; 95% CI: 1.22-2.94)., Conclusions: Among those with advanced prostate cancer, unmarried and widowed participants had worse OS compared with married participants., Impact: This research highlighted the importance of social support in OS within this vulnerable population., (©2024 American Association for Cancer Research.)
- Published
- 2024
- Full Text
- View/download PDF
49. Pain and Its Association with Survival for Black and White Individuals with Advanced Prostate Cancer in the United States.
- Author
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Rencsok EM, Slopen N, McManus HD, Autio KA, Morgans AK, McSwain L, Barata P, Cheng HH, Dreicer R, Gerke T, Green R, Heath EI, Howard LE, McKay RR, Nowak J, Pileggi S, Pomerantz MM, Rathkopf DE, Tagawa ST, Whang YE, Ragin C, Odedina FT, Kantoff PW, Vinson J, Villanti P, Haneuse S, Mucci LA, and George DJ
- Subjects
- Humans, Male, Black or African American, Prospective Studies, Quality of Life, United States epidemiology, White, Survival Rate, Prostatic Neoplasms complications, Cancer Pain
- Abstract
Bone pain is a well-known quality-of-life detriment for individuals with prostate cancer and is associated with survival. This study expands previous work into racial differences in multiple patient-reported dimensions of pain and the association between baseline and longitudinal pain and mortality. This is a prospective cohort study of individuals with newly diagnosed advanced prostate cancer enrolled in the International Registry for Men with Advanced Prostate Cancer (IRONMAN) from 2017 to 2023 at U.S. sites. Differences in four pain scores at study enrollment by race were investigated. Cox proportional hazards models and joint longitudinal survival models were fit for each of the scale scores to estimate HRs and 95% confidence intervals (CI) for the association with all-cause mortality. The cohort included 879 individuals (20% self-identifying as Black) enrolled at 38 U.S. sites. Black participants had worse pain at baseline compared with White participants, most notably a higher average pain rating (mean 3.1 vs. 2.2 on a 10-point scale). For each pain scale, higher pain was associated with higher mortality after adjusting for measures of disease burden, particularly for severe bone pain compared with no pain (HR, 2.47; 95% CI: 1.44-4.22). The association between pain and all-cause mortality was stronger for participants with castration-resistant prostate cancer compared with those with metastatic hormone-sensitive prostate cancer and was similar among Black and White participants. Overall, Black participants reported worse pain than White participants, and more severe pain was associated with higher mortality independent of clinical covariates for all pain scales., Significance: Black participants with advanced prostate cancer reported worse pain than White participants, and more pain was associated with worse survival. More holistic clinical assessments of pain in this population are needed to determine the factors upon which to intervene to improve quality of life and survivorship, particularly for Black individuals., (© 2024 The Authors; Published by the American Association for Cancer Research.)
- Published
- 2024
- Full Text
- View/download PDF
50. A harmonized resource of integrated prostate cancer clinical, -omic, and signature features.
- Author
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Laajala TD, Sreekanth V, Soupir AC, Creed JH, Halkola AS, Calboli FCF, Singaravelu K, Orman MV, Colin-Leitzinger C, Gerke T, Fridley BL, Tyekucheva S, and Costello JC
- Subjects
- Humans, Male, Gene Expression Profiling, Genomics, Reproducibility of Results, Transcriptome, Datasets as Topic, Meta-Analysis as Topic, Prostatic Neoplasms genetics, Prostatic Neoplasms pathology
- Abstract
Genomic and transcriptomic data have been generated across a wide range of prostate cancer (PCa) study cohorts. These data can be used to better characterize the molecular features associated with clinical outcomes and to test hypotheses across multiple, independent patient cohorts. In addition, derived features, such as estimates of cell composition, risk scores, and androgen receptor (AR) scores, can be used to develop novel hypotheses leveraging existing multi-omic datasets. The full potential of such data is yet to be realized as independent datasets exist in different repositories, have been processed using different pipelines, and derived and clinical features are often not provided or not standardized. Here, we present the curatedPCaData R package, a harmonized data resource representing >2900 primary tumor, >200 normal tissue, and >500 metastatic PCa samples across 19 datasets processed using standardized pipelines with updated gene annotations. We show that meta-analysis across harmonized studies has great potential for robust and clinically meaningful insights. curatedPCaData is an open and accessible community resource with code made available for reproducibility., (© 2023. The Author(s).)
- Published
- 2023
- Full Text
- View/download PDF
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