144 results on '"Geibel S"'
Search Results
2. Investigating electromagnetically induced transparency spectral lineshape distortion due to non-uniform fields in Rydberg-atom electrometry
- Author
-
Rotunno, AP, Holloway, CL, Prajapati, N, Berweger, S, Artusio-Glimpse, AB, Brown, R, Simons, M, Robinson, AK, Kayim, BN, Viray, MA, Jones, JF, Sawyer, BC, Wyllie, R, Walker, T, Ziolkowski, RW, Jefferts, SR, Geibel, S, Wheeler, J, Imhof, E, Rotunno, AP, Holloway, CL, Prajapati, N, Berweger, S, Artusio-Glimpse, AB, Brown, R, Simons, M, Robinson, AK, Kayim, BN, Viray, MA, Jones, JF, Sawyer, BC, Wyllie, R, Walker, T, Ziolkowski, RW, Jefferts, SR, Geibel, S, Wheeler, J, and Imhof, E
- Abstract
We investigate the effects of spatially non-uniform radio-frequency electric (E) field amplitudes on the spectral line shapes of electromagnetically induced transparency (EIT) signals in Rydberg atomic systems used in electrometry (i.e., the metrology of E-field strengths). Spatially non-uniform fields distort the EIT spectra from that of an ideal case, and understanding this distortion is important in the development of Rydberg atom-based sensors, as these distortions can limit accuracy and sensitivity. To characterize this distortion, we present a model that approximates the atom vapor as multi-layered media and then uses Beer’s law to combine the absorption through its many discrete thin segments. We present a set of expected line distortions caused by various RF electric-field distributions found in practice. This provides an intuitive diagnostic tool for experiments. We compare this model to measured experimental atomic spectra in both two-photon and three-photon excitation schemes in the presence of non-uniform radio-frequency fields. We show that we can accurately model and reproduce the EIT lineshape distortion observed in these experimental data.
- Published
- 2023
3. ATPase domain D3 of the EssC coupling protein from S. aureus USA300
- Author
-
Mietrach, N.A., primary and Geibel, S., additional
- Published
- 2020
- Full Text
- View/download PDF
4. Structure of protomer 2 of the ESX-3 core complex
- Author
-
Famelis, N., primary, Rivera-Calzada, A., additional, Llorca, O., additional, and Geibel, S., additional
- Published
- 2019
- Full Text
- View/download PDF
5. Structure of the ESX-3 core complex
- Author
-
Famelis, N., primary, Rivera-Calzada, A., additional, Llorca, O., additional, and Geibel, S., additional
- Published
- 2019
- Full Text
- View/download PDF
6. Structure of EccB3 dimer from the ESX-3 core complex
- Author
-
Famelis, N., primary, Rivera-Calzada, A., additional, Llorca, O., additional, and Geibel, S., additional
- Published
- 2019
- Full Text
- View/download PDF
7. Structure of protomer 1 of the ESX-3 core complex
- Author
-
Famelis, N., primary, Rivera-Calzada, A., additional, Llorca, O., additional, and Geibel, S., additional
- Published
- 2019
- Full Text
- View/download PDF
8. People Living with HIV Resilience Scale
- Author
-
Gottert, A., primary, Friedland, B., additional, Geibel, S., additional, Nyblade, L., additional, Baral, S. D., additional, Kentutsi, S., additional, Mallouris, C., additional, Sprague, L., additional, Hows, J., additional, Anam, F., additional, Amanyeiwe, U., additional, and Pulerwitz, J., additional
- Published
- 2019
- Full Text
- View/download PDF
9. Structural and biophysical investigation of the interaction of a mutant Grb2 SH2 domain (W121G) with its cognate phosphopeptide
- Author
-
Papaioannou, D., Geibel, S., Kunze, M.B.A., Kay, C.W.M., and Waksman, Gabriel
- Subjects
biological phenomena, cell phenomena, and immunity ,bcs - Abstract
The adaptor protein Grb2 is a key element of mitogenetically important signaling pathways. With its SH2 domain it binds to upstream targets while its SH3 domains bind to downstream proteins thereby relaying signals from the cell membranes to the nucleus. The Grb2 SH2 domain binds to its targets by recognizing a phosphotyrosine (pY) in a pYxNx peptide motif, requiring an Asn at the +2 position C-terminal to the pY with the residue either side of this Asn being hydrophobic. Structural analysis of the Grb2 SH2 domain in complex with its cognate peptide has shown that the peptide adopts a unique β-turn conformation, unlike the extended conformation that phosphopeptides adopt when bound to other SH2 domains. TrpEF1 (W121) is believed to force the peptide into this unusual conformation conferring this unique specificity to the Grb2 SH2 domain. Using X-ray crystallography, electron paramagnetic resonance (EPR) spectroscopy, and isothermal titration calorimetry (ITC), we describe here a series of experiments that explore the role of TrpEF1 in determining the specificity of the Grb2 SH2 domain. Our results demonstrate that the ligand does not adopt a pre-organized structure before binding to the SH2 domain, rather it is the interaction between the two that imposes the hairpin loop to the peptide. Furthermore, we find that the peptide adopts a similar structure when bound to both the wild-type Grb2 SH2 domain and a TrpEF1Gly mutant. This suggests that TrpEF1 is not the determining factor for the conformation of the phosphopeptide.
- Published
- 2016
10. Same-sex sexual behavior of men in Kenya: Implications for HIV prevention, programs, and policy
- Author
-
Geibel, S.
- Subjects
male sex workers ,surveys ,HIV prevention ,Africa ,virus diseases ,men who have sex with men ,condoms ,PhD Summary - Abstract
Unprotected anal sex has long been recognized as a risk factor for HIV transmission among men who have sex with men (MSM). In Africa, however, general denial of MSM existence and associated stigma discouraged research. To address this gap in the literature, partners conducted the first behavioral surveys of MSM in Kenya. The first study was to assess HIV risk among MSM in Nairobi, and the second study a pre-post intervention study of male sex workers in Mombasa. The 2004 behavioral survey of 500 men in Mombasa revealed that MSM were having multiple sexual partners and failed to access appropriate prevention counseling and care at Kenya clinics. A 2006 capture-recapture enumeration in Mombasa estimated that over 700 male sex workers were active, after which a pre-intervention baseline survey of 425 male sex workers was conducted. Awareness of unprotected anal sex as an HIV risk behavior and consistent condom use with clients was low, and use of oil-based lubricants high. Based on this information, peer educators were trained in HIV prevention, basic counseling skills, and distribution of condoms and lubricants. To assess impact of the interventions, a follow-up survey of 442 male sex workers was implemented in 2008. Exposure to peer educators was significantly associated with increased consistent condom use, improved HIV knowledge, and increased use of water-based lubricants. These results have provided needed information to the Government of Kenya and have informed HIV prevention interventions.
- Published
- 2012
11. Crystal Structure Analysis of a mutant Grb2 SH2 domain (W121G) with a pYVNV peptide
- Author
-
Papaioannou, D., primary, Geibel, S., additional, Kunze, M., additional, Kay, C., additional, and Waksman, G., additional
- Published
- 2016
- Full Text
- View/download PDF
12. Involving young people in the care and support of people living with HIV and AIDS in Zambia
- Author
-
Esu-Williams, E, Schenk, K, Motsepe, J, Geibel, S, and Zulu, A
- Published
- 2004
13. Crystal structure of the FimD usher traversed by the pilus tip complex assembly composed of FimC:FimF:FimG:FimH
- Author
-
Geibel, S., primary and Waksman, G., additional
- Published
- 2013
- Full Text
- View/download PDF
14. Crystal structure of the usher:chaperone:adhesin subunit complex – insights into pilus assembly mechanism
- Author
-
Phan, G., primary, Remaut, H., additional, Allen, W., additional, Geibel, S., additional, Lebedev, A., additional, Henderson, N., additional, Thanassi, D., additional, and Waksman, G., additional
- Published
- 2011
- Full Text
- View/download PDF
15. Crystal structure of the FimD usher bound to its cognate FimC:FimH substrate
- Author
-
Phan, G., primary, Remaut, H., additional, Lebedev, A., additional, Geibel, S., additional, and Waksman, G., additional
- Published
- 2011
- Full Text
- View/download PDF
16. Conformational dynamics of Na+/K+- and H+/K+-ATPase probed by voltage clamp fluorometry.
- Author
-
Geibel, S., Zimmermann, D.K., Zifarelli, G., Becker, A.E., Koenderink, J.B., Hu, Y.K., Kaplan, J., Friedrich, T., Bamberg, E., Geibel, S., Zimmermann, D.K., Zifarelli, G., Becker, A.E., Koenderink, J.B., Hu, Y.K., Kaplan, J., Friedrich, T., and Bamberg, E.
- Abstract
Item does not contain fulltext, We used the method of site-directed fluorescence labeling in combination with voltage-clamp fluorometry for time-resolved recording of localized conformational transitions of the Na(+)/K(+)- and H(+)/K(+)-ATPase. Therefore, single cysteine mutations were introduced into the extracellular TM5-TM6 loop of the sheep Na(+)/K(+)-ATPase alpha(1)-subunit devoid of other extracellular cysteines. Upon expression in Xenopus oocytes and covalent attachment of tetramethylrhodamine-maleimide (TMRM) as a reporter fluorophore, Cys-mutant N790C showed large fluorescence changes of up to 5% in response to extracellular K(+) that were completely abolished by ouabain. When voltage jumps were applied under Na(+)/Na(+)-exchange conditions, we observed fluorescence changes that paralleled the transient currents originating from the E(1)P<-->E(2)P transition. These fluorescence changes were also completely inhibited by ouabain, as were the voltage jump-induced transient currents. Transient fluorescence changes could also be measured as a function of increasing K(+) concentrations, that is, under turnover conditions. As a result, the distribution between E(1) and E(2) states can be determined at any time and membrane potential. Very similar fluorescence signals were obtained for rat gastric H(+)/K(+)-ATPase upon expression in oocytes, when a single cysteine was introduced at a position homologous to N790 in Na(+)/K(+)-ATPase for attachment of the fluorophore. As to the high sequence similarity among P-type ATPases within the TM5 helix and the TM5-TM6 loop region, our results enable new means of kinetic investigation for these pumps under physiological conditions in living cells.
- Published
- 2003
17. Electrophysiological analysis of the mutated Na,K-ATPase cation binding pocket.
- Author
-
Koenderink, J.B., Geibel, S., Grabsch, E., Pont, J.J.H.H.M. de, Bamberg, E., Friedrich, T., Koenderink, J.B., Geibel, S., Grabsch, E., Pont, J.J.H.H.M. de, Bamberg, E., and Friedrich, T.
- Abstract
Contains fulltext : 142631.pdf (Publisher’s version ) (Open Access), Na,K-ATPase mediates net electrogenic transport by extruding three Na+ ions and importing two K+ ions across the plasma membrane during each reaction cycle. We mutated putative cation coordinating amino acids in transmembrane hairpin M5-M6 of rat Na,K-ATPase: Asp776 (Gln, Asp, Ala), Glu779 (Asp, Gln, Ala), Asp804 (Glu, Asn, Ala), and Asp808 (Glu, Asn, Ala). Electrogenic cation transport properties of these 12 mutants were analyzed in two-electrode voltage-clamp experiments on Xenopus laevis oocytes by measuring the voltage dependence of K+-stimulated stationary currents and pre-steady-state currents under electrogenic Na+/Na+ exchange conditions. Whereas mutants D804N, D804A, and D808A hardly showed any Na+/K+ pump currents, the other constructs could be classified according to the [K+] and voltage dependence of their stationary currents; mutants N776A and E779Q behaved similarly to the wild-type enzyme. Mutants E779D, E779A, D808E, and D808N had in common a decreased apparent affinity for extracellular K+. Mutants N776Q, N776D, and D804E showed large deviations from the wild-type behavior; the currents generated by mutant N776D showed weaker voltage dependence, and the current-voltage curves of mutants N776Q and D804E exhibited a negative slope. The apparent rate constants determined from transient Na+/Na+ exchange currents are rather voltage-independent and at potentials above -60 mV faster than the wild type. Thus, the characteristic voltage-dependent increase of the rate constants at hyperpolarizing potentials is almost absent in these mutants. Accordingly, dislocating the carboxamide or carboxyl group of Asn776 and Asp804, respectively, decreases the extracellular Na+ affinity.
- Published
- 2003
18. Two-electrode voltage-clamp analysis of Na,K-ATPase asparagine 776 mutants.
- Author
-
Koenderink, J.B., Geibel, S., Grabsch, E., Pont, J.J.H.H.M. de, Bamberg, E., Friedrich, T., Koenderink, J.B., Geibel, S., Grabsch, E., Pont, J.J.H.H.M. de, Bamberg, E., and Friedrich, T.
- Abstract
Item does not contain fulltext, Steady-state and pre-steady-state currents of Asn(776) mutants of Na,K-ATPase are presented. The stationary current generated by N776Q strongly depends on the membrane potential, but has a negative slope, opposite to that of the wild-type enzyme. The apparent rate constant of the reaction sequence E(1)P(Na(+)) <--> E(2)P + Na(+) of this mutant is rather independent of the membrane potential and is at resting and depolarizing membrane potential higher than that of the wild-type enzyme. Thus, the voltage-dependent increase of the rate coefficient of the wild type that is associated with extracellular Na(+) rebinding is almost absent in the N776Q mutant. These findings indicate that dislocating the carboxamide group of Asn(776) decreases the affinity of sodium at its extracellular binding site.
- Published
- 2003
19. Crystal structure of the catalytic domain of primase Repb' in complex with initiator DNA
- Author
-
Geibel, S., primary, Banchenko, S., additional, Engel, M., additional, Lanka, E., additional, and Saenger, W., additional
- Published
- 2009
- Full Text
- View/download PDF
20. Crystal structure of primase RepB'
- Author
-
Geibel, S., primary, Banchenko, S., additional, Engel, M., additional, Lanka, E., additional, and Saenger, W., additional
- Published
- 2009
- Full Text
- View/download PDF
21. Sexual risk behaviour and HAART: a comparative study of HIV-infected persons on HAART and on preventive therapy in Kenya
- Author
-
Sarna, A, primary, Luchters, S M F, additional, Geibel, S, additional, Kaai, S, additional, Munyao, P, additional, Shikely, K S, additional, Mandaliya, K, additional, van Dam, J, additional, and Temmerman, M, additional
- Published
- 2008
- Full Text
- View/download PDF
22. Engaging Women Who Are Depressed and Economically Disadvantaged in Mental Health Treatment
- Author
-
Grote, N. K., primary, Zuckoff, A., additional, Swartz, H., additional, Bledsoe, S. E., additional, and Geibel, S., additional
- Published
- 2007
- Full Text
- View/download PDF
23. ‘We are no longer called club members but caregivers’: Involving youth in HIV and AIDS caregiving in rural Zambia
- Author
-
Esu-Williams, E., primary, Schenk, K. D., additional, Geibel, S., additional, Motsepe, J., additional, Zulu, A., additional, Bweupe, P., additional, and Weiss, E., additional
- Published
- 2006
- Full Text
- View/download PDF
24. Guerra civil não-declarada? Um recorte do status da violência urbana em uma capital no Brasil
- Author
-
Ana Celia D C B Romeo, Pedro Lins Palmeira Cardoso, Geovaldo Barreto Correia-Jr, Maria Eduarda Alonso Joaquim-de-Carvalho, Felipe Miranda Santos, Danielle Freitas Serafim, Geibel Santos dos Reis-Junior, and André Gusmão Cunha
- Subjects
Violência ,Traumatismos ,Ferimentos e Lesões ,Conflitos Armados ,Surgery ,RD1-811 - Abstract
RESUMO Objetivo: a violência civil é responsável por 2,5% da mortalidade mundial, matou mais pessoas no século XXI do que o somatório de todas as guerras deste período. Este estudo descreve as vítimas de violência admitidas em um hospital de referência em trauma em Salvador - Bahia, Brasil e analisa o impacto dos diferentes tipos de violência interpessoal. Métodos: foram incluídos vítimas de violência interpessoal admitidas entre julho de 2015 e julho de 2017. 1296 pacientes (média de idade foi 30,3 anos, 90% do sexo masculino) foram divididos em três grupos de acordo com o mecanismo de violência interpessoal: espancamento, ferimentos por projétil de arma de fogo (FPAF), ferimentos por arma branca (FAB). Os grupos foram comparados de acordo com as seguintes variáveis: idade, sexo, mecanismo de trauma, Revised Trauma Score (RTS) na admissão, necessidade de internamento em unidade de tratamento intensivo (UTI), tempo de internamento, necessidade de transfusão de hemocomponentes e morte. Resultados: FPAF foram o principal mecanismo de injúria (59%), seguido por agressão (24%) e FAB (17%). As vítimas de FPAF apresentaram a menor média de RTS na admissão, maior necessidade de uso de hemocomponentes e de internamento em UTI. Vítimas de espancamento tiveram a maior média de duração de internação hospitalar (11,6±19,6 dias). Os FPAF causaram 77,4% das mortes. Conclusão: vítimas de FPAF são mais críticas, requerendo maior tempo de tratamento em UTI, mais hemocomponentes e maior mortalidade comparativamente às vítimas de FAB e espancamento.
- Published
- 2020
- Full Text
- View/download PDF
25. The impact of peer outreach on HIV knowledge and prevention behaviours of male sex workers in Mombasa, Kenya.
- Author
-
Geibel S, King'ola N, Temmerman M, and Luchters S
- Published
- 2012
26. HIV vulnerability of men who have sex with men in developing countries: Horizons studies, 2001 -- 2008.
- Author
-
Geibel S, Tun W, Tapsoba P, and Kellerman S
- Abstract
While male-to-male sexual behavior has been recognized as a primary risk factor for human immunodeficiency virus (HIV), research targeting men who have sex with men (MSM) in less-developed countries has been limited due to high levels of stigma and discrimination. In response, the Population Council's Horizons Program began implementing research activities in Africa and South America beginning in 2001, with the objectives of gathering information on MSM sexual risk behaviors, evaluating HIV-prevention programs, and informing HIV policy makers. The results of this nearly decade-long program are presented in this article as a summary of the Horizons MSM studies in Africa (Senegal and Kenya) and Latin America (Brazil and Paraguay), and include research methodologies, study findings, and interventions evaluated. We also discuss future directions and approaches for HIV research among MSM in developing countries. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
27. Sexual behavior of HIV-positive adults not accessing HIV treatment in Mombasa, Kenya: Defining their prevention needs
- Author
-
Sarna Avina, Luchters Stanley, Pickett Melissa, Chersich Matthew, Okal Jerry, Geibel Scott, Kingola Nzioki, and Temmerman Marleen
- Subjects
PLHIV ,Prevention of sexual transmission of HIV ,Sexual behavior ,Unsafe sex ,Africa ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Background HIV spread continues at high rates from infected persons to their sexual partners. In 2009, an estimated 2.6 million new infections occurred globally. People living with HIV (PLHIV) receiving treatment are in contact with health workers and therefore exposed to prevention messages. By contrast, PLHIV not receiving ART often fall outside the ambit of prevention programs. There is little information on their sexual risk behaviors. This study in Mombasa Kenya therefore explored sexual behaviors of PLHIV not receiving any HIV treatment. Results Using modified targeted snowball sampling, 698 PLHIV were recruited through community health workers and HIV-positive peer counsellors. Of the 59.2% sexually-active PLHIV, 24.5% reported multiple sexual partners. Of all sexual partners, 10.2% were HIV negative, while 74.5% were of unknown HIV status. Overall, unprotected sex occurred in 52% of sexual partnerships; notably with 32% of HIV-negative partners and 54% of partners of unknown HIV status in the last 6 months. Multivariate analysis, controlling for intra-client clustering, showed non-disclosure of HIV status (AOR: 2.38, 95%CI: 1.47-3.84, p < 0.001); experiencing moderate levels of perceived stigma (AOR: 2.94, 95%CI: 1.50-5.75, p = 0.002); and believing condoms reduce sexual pleasure (AOR: 2.81, 95%CI: 1.60-4.91, p < 0.001) were independently associated with unsafe sex. Unsafe sex was also higher in those using contraceptive methods other than condoms (AOR: 5.47, 95%CI: 2.57-11.65, p < 0.001); or no method (AOR: 3.99, 95%CI: 2.06-7.75, p < 0.001), compared to condom users. Conclusions High-risk sexual behaviors are common among PLHIV not accessing treatment services, raising the risk of HIV transmission to discordant partners. This population can be identified and reached in the community. Prevention programs need to urgently bring this population into the ambit of prevention and care services. Moreover, beginning HIV treatment earlier might assist in bringing this group into contact with providers and HIV prevention services, and in reducing risk behaviors.
- Published
- 2012
- Full Text
- View/download PDF
28. Use of AUDIT, and measures of drinking frequency and patterns to detect associations between alcohol and sexual behaviour in male sex workers in Kenya
- Author
-
Temmerman Marleen, King'ola Nzioki, Lango Daniel, Syengo Masila, Geibel Scott, Luchters Stanley, and Chersich Matthew F
- Subjects
alcohol ,sexual behaviour ,Kenya ,indicators ,men who have sex with men ,sex worker ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Previous research has linked alcohol use with an increased number of sexual partners, inconsistent condom use and a raised incidence of sexually transmitted infections (STIs). However, alcohol measures have been poorly standardised, with many ill-suited to eliciting, with adequate precision, the relationship between alcohol use and sexual risk behaviour. This study investigates which alcohol indicator - single-item measures of frequency and patterns of drinking ( > = 6 drinks on 1 occasion), or the Alcohol Use Disorders Identification Test (AUDIT) - can detect associations between alcohol use and unsafe sexual behaviour among male sex workers. Methods A cross-sectional survey in 2008 recruited male sex workers who sell sex to men from 65 venues in Mombasa district, Kenya, similar to a 2006 survey. Information was collected on socio-demographics, substance use, sexual behaviour, violence and STI symptoms. Multivariate models examined associations between the three measures of alcohol use and condom use, sexual violence, and penile or anal discharge. Results The 442 participants reported a median 2 clients/week (IQR = 1-3), with half using condoms consistently in the last 30 days. Of the approximately 70% of men who drink alcohol, half (50.5%) drink two or more times a week. Binge drinking was common (38.9%). As defined by AUDIT, 35% of participants who drink had hazardous drinking, 15% harmful drinking and 21% alcohol dependence. Compared with abstinence, alcohol dependence was associated with inconsistent condom use (AOR = 2.5, 95%CI = 1.3-4.6), penile or anal discharge (AOR = 1.9, 95%CI = 1.0-3.8), and two-fold higher odds of sexual violence (AOR = 2.0, 95%CI = 0.9-4.9). Frequent drinking was associated with inconsistent condom use (AOR = 1.8, 95%CI = 1.1-3.0) and partner number, while binge drinking was only linked with inconsistent condom use (AOR = 1.6, 95%CI = 1.0-2.5). Conclusions Male sex workers have high levels of hazardous and harmful drinking, and require alcohol-reduction interventions. Compared with indicators of drinking frequency or pattern, the AUDIT measure has stronger associations with inconsistent condom use, STI symptoms and sexual violence. Increased use of the AUDIT tool in future studies may assist in delineating with greater precision the explanatory mechanisms which link alcohol use, drinking contexts, sexual behaviours and HIV transmission.
- Published
- 2011
- Full Text
- View/download PDF
29. P01-39 Mitochondrial toxicity screening to support the R&D crop protection pipeline.
- Author
-
Hilmi, C., Raschke, M., Lempereur, V., Geibel, S., Marheineke, D., and Tilmant, K.
- Subjects
- *
PLANT protection , *MITOCHONDRIA - Published
- 2024
- Full Text
- View/download PDF
30. Night admission is an independent risk factor for mortality in trauma patients - a systemic error approach
- Author
-
LEONARDO DE SOUZA BARBOSA, GEIBEL SANTOS REIS DOS JÚNIOR, RICARDO ZANTIEFF TOPOLSKI CHAVES, DAVI JORGE FONTOURA SOLLA, LEONARDO FERNANDES CANEDO, and ANDRÉ GUSMÃO CUNHA
- Subjects
Wounds and Injuries ,Mortality ,Patient Admission ,Time Factors ,Emergencies ,Surgery ,RD1-811 - Abstract
ABSTRACTObjective:to assess the impact of the shift inlet trauma patients, who underwent surgery, in-hospital mortality.Methods:a retrospective observational cohort study from November 2011 to March 2012, with data collected through electronic medical records. The following variables were statistically analyzed: age, gender, city of origin, marital status, admission to the risk classification (based on the Manchester Protocol), degree of contamination, time / admission round, admission day and hospital outcome.Results:during the study period, 563 patients injured victims underwent surgery, with a mean age of 35.5 years (± 20.7), 422 (75%) were male, with 276 (49.9%) received in the night shift and 205 (36.4%) on weekends. Patients admitted at night and on weekends had higher mortality [19 (6.9%) vs. 6 (2.2%), p=0.014, and 11 (5.4%) vs. 14 (3.9%), p=0.014, respectively]. In the multivariate analysis, independent predictors of mortality were the night admission (OR 3.15), the red risk classification (OR 4.87), and age (OR 1.17).Conclusion:the admission of night shift and weekend patients was associated with more severe and presented higher mortality rate. Admission to the night shift was an independent factor of surgical mortality in trauma patients, along with the red risk classification and age.
- Full Text
- View/download PDF
31. Superior target genes and pathways for RNAi-mediated pest control revealed by genome-wide analysis in the beetle Tribolium castaneum.
- Author
-
Buer B, Dönitz J, Milner M, Mehlhorn S, Hinners C, Siemanowski-Hrach J, Ulrich JK, Großmann D, Cedden D, Nauen R, Geibel S, and Bucher G
- Abstract
Background: An increasing human population, the emergence of resistances against pesticides and their potential impact on the environment call for the development of new eco-friendly pest control strategies. RNA interference (RNAi)-based pesticides have emerged as a new option with the first products entering the market. Essentially, double-stranded RNAs targeting essential genes of pests are either expressed in the plants or sprayed on their surface. Upon feeding, pests mount an RNAi response and die. However, it has remained unclear whether RNAi-based insecticides should target the same pathways as classic pesticides or whether the different mode-of-action would favor other processes. Moreover, there is no consensus on the best genes to be targeted., Results: We performed a genome-wide screen in the red flour beetle to identify 905 RNAi target genes. Based on a validation screen and clustering, we identified the 192 most effective target genes in that species. The transfer to oral application in other beetle pests revealed a list of 34 superior target genes, which are an excellent starting point for application in other pests. Gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) analyses of our genome-wide dataset revealed that genes with high efficacy belonged mainly to basic cellular processes such as gene expression and protein homeostasis - processes not targeted by classic insecticides., Conclusion: Our work revealed the best target genes and target processes for RNAi-based pest control and we propose a procedure to transfer our short list of superior target genes to other pests. © 2024 The Author(s). Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry., (© 2024 The Author(s). Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.)
- Published
- 2024
- Full Text
- View/download PDF
32. The novel herbicide icafolin-methyl is a plant-specific inhibitor of tubulin polymerization.
- Author
-
Haaf KB, Peters O, Laber B, Lange G, Gatzweiler E, Geibel S, Passon D, Endler A, Lange S, Kahlau S, Eroschenko T, Waldraff P, and Lümmen P
- Abstract
Background: Without controlling weeds, it is estimated that about one third of global crop yields would be lost. Herbicides remain the most effective solution for weed control, but they face multiple challenges, such as the emergence and growth of resistant weed populations. Consequently, there is an urgent need for either herbicides with new modes of action or at least novel chemistries within established modes of action, with outstanding efficacy but without showing cross-resistance to the herbicides present in the prospective markets., Results: Icafolin-methyl is a novel herbicide with a unique biological profile. It is hydrolyzed in planta to the carboxylic acid icafolin. After post-emergence application icafolin-methyl and icafolin both show high efficacy against the most relevant competitive weeds in cold and warm season cropping systems at low application rates, including resistant black-grass and rye-grass biotypes. Biochemical and genetic evidence is provided that icafolin-methyl and icafolin inhibit plant tubulin polymerization probably by binding to ß-tubulins., Conclusion: Icafolin-methyl is a novel non-selective herbicide with an established mode of action, but with a superior potency and spectrum, specifically after foliar application. This makes icafolin-methyl fundamentally different from existing tubulin polymerization inhibiting herbicides. It complements the farmers weed control toolbox, particularly with respect to resistance management. © 2024 Society of Chemical Industry., (© 2024 Society of Chemical Industry.)
- Published
- 2024
- Full Text
- View/download PDF
33. Cell Painting unravels insecticidal modes of action on Spodoptera frugiperda insect cells.
- Author
-
Hecker FA, Leggio B, König T, Kim V, Osterland M, Gnutt D, Niehaus K, and Geibel S
- Subjects
- Animals, Sf9 Cells, Spodoptera drug effects, Spodoptera cytology, Insecticides pharmacology, Insecticides toxicity
- Abstract
The "Cell Painting" technology utilizes multiplexed fluorescent staining of various cell organelles, to produce high-content microscopy images of cells for multidimensional phenotype assessment. The phenotypic profiles extracted from those images can be analyzed upon perturbations with biologically active molecules to annotate the mode of action or biological activity by comparison with reference profiles of already known mechanisms of action, ultimately enabling the determination of on-target and off-target effects. This approach is already described in various human cell cultures, the most commonly used being the U2OS cell line, yet allows broad applications in additional areas of chemical-biological research. Here we describe for the first time the application and adaptation of Cell Painting to an insect cell line, the Sf9 cells from Spodoptera frugiperda. By adjusting image acquisition and analysis models, specific phenotypic profiles were obtained in a dose-dependent manner for 20 reference compounds, including representatives for the most relevant insecticidal modes of action categories (nerve & muscle, respiration and growth & development). Through a dimensionality-reduction method, both calculations of phenotypic half maximal inhibition concentration (IC
50 ) values as well as similarity analysis of the obtained profiles by hierarchical clustering were performed. By Cell Painting effects on the phenotype could be obtained at higher sensitivity than in other assay formats, such as cytotoxicity assessments. More importantly, these analyses provide insight into mechanistic determinants of biological activity. Compounds with similar modes of action showed a high degree of proximity in a hierarchical clustering analysis while being distinct from actives with an unrelated mode of action. In essence, we provide strong evidence on the impact of Cell Painting mechanistic understanding of insecticides with regards to determinants of efficacy and safety utilizing an insect cell model system., (Copyright © 2024. Published by Elsevier Inc.)- Published
- 2024
- Full Text
- View/download PDF
34. A novel target-site mutation (H146Q) outside the ubiquinone binding site of succinate dehydrogenase confers high levels of resistance to cyflumetofen and pyflubumide in Tetranychus urticae.
- Author
-
İnak E, De Rouck S, Demirci B, Dermauw W, Geibel S, and Van Leeuwen T
- Subjects
- Animals, Succinate Dehydrogenase genetics, Succinate Dehydrogenase metabolism, Succinate Dehydrogenase antagonists & inhibitors, Mutation, Binding Sites, Ubiquinone analogs & derivatives, Drug Resistance genetics, Insect Proteins genetics, Insect Proteins metabolism, Female, Propionates pharmacology, Tetranychidae genetics, Tetranychidae drug effects, Acaricides pharmacology
- Abstract
Mitochondrial electron transfer inhibitors at complex II (METI-II), also referred to as succinate dehydrogenase inhibitors (SDHI), represent a recently developed class of acaricides encompassing cyflumetofen, cyenopyrafen, pyflubumide and cyetpyrafen. Despite their novelty, resistance has already developed in the target pest, Tetranychus urticae. In this study a new mutation, H146Q in a highly conserved region of subunit B of complex II, was identified in a T. urticae population resistant to all METI-IIs. In contrast to previously described mutations, H146Q is located outside the ubiquinone binding site of complex II. Marker-assisted backcrossing of this mutation in a susceptible genetic background validated its association with resistance to cyflumetofen and pyflubumide, but not cyenopyrafen or cyetpyrafen. Biochemical assays and the construction of inhibition curves with isolated mitochondria corroborated this selectivity. In addition, phenotypic effects of H146Q, together with the previously described H258L, were further examined via CRISPR/Cas9 gene editing. Although both mutations were successfully introduced into a susceptible T. urticae population, the H146Q gene editing event was only recovered in individuals already harboring the I260V mutation, known to confer resistance towards cyflumetofen. The combination of H146Q + I260V conferred high resistance levels to all METI-II acaricides with LC
50 values over 5000 mg a.i./L for cyflumetofen and pyflubumide. Similarly, the introduction of H258L via gene editing resulted in high resistance levels to all tested acaricides, with extreme LC50 values (>5000 mg a.i./L) for cyenopyrafen and cyetpyrafen, but lower resistance levels for pyflubumide and cyflumetofen. Together, these findings indicate that different mutations result in a different cross-resistance spectrum, probably also reflecting subtle differences in the binding mode of complex II acaricides., Competing Interests: Declaration of competing interest The authors declare that they have no competing interests., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
35. 'I take the drugs… to make the sickness to move out of me': key populations' and service provider perspectives about facilitators and barriers to ART adherence and retention in care in Nigeria.
- Author
-
Dirisu O, Eluwa GIE, Callens S, Adams E, Akinwunmi A, Geibel S, and Iyortim I
- Abstract
Background: Adherence to antiretroviral therapy (ART) has individual and public health benefits and is critical to improving life expectancy, achieving viral suppression, and reducing the risk of HIV transmission. This qualitative study explored the experience of receiving care as well as perceived facilitators and barriers of treatment initiation, retention in ART care, and adherence to treatment., Methods: In-depth interviews were conducted among 28 men who have sex with men (MSM) and female sex workers (FSWs) receiving ART services in Lagos and Benue states. Key informant interviews were also conducted among 16 service providers engaged in counselling, clinical care, and ART treatment for MSM and FSWs. The Social Ecology Model guided the exploration of perceived barriers and facilitators of treatment initiation, retention in ART care and adherence to treatment. Qualitative data analysis was managed using NVIVO 11 software and themes were analysed using thematic analysis., Results: We found that the key barriers to ART adherence were low motivation to comply with medication regimen, work commitments, socioeconomic factors, stigma, negative provider attitude and distance to health facilities. Facilitators of adherence identified include the desire to live a productive life, strong family support and participation in support group programs. Comprehensive adherence counselling, support group programs and an effective follow-up system were factors identified by service providers as key to facilitating adherence., Conclusion: To be effective, ART programs must address the unique challenges key populations face in accessing treatment and achieving optimal adherence regarding establishing a strong support system and follow-up. Community level interventions that support a stigma-free environment are critical to sustaining engagement in care., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
36. Characterisation of lepidopteran geranylgeranyl diphosphate synthase as a putative pesticide target.
- Author
-
Katsavou E, Sarafoglou C, Balabanidou V, Skoufa E, Nauen R, Linka M, Geibel S, Denecke S, and Vontas J
- Subjects
- Humans, Animals, Bees genetics, Farnesyltranstransferase genetics, Farnesyltranstransferase metabolism, Phylogeny, Zoledronic Acid, Pesticides
- Abstract
Geranylgeranyl pyrophosphate (diphosphate) synthase (GGPPS) plays an important role in various physiological processes in insects, such as isoprenoid biosynthesis and protein prenylation. Here, we functionally characterised the GGPPS from the major agricultural lepidopteran pests Spodoptera frugiperda and Helicoverpa armigera. Partial disruption of GGPPS by CRISPR in S. frugiperda decreased embryo hatching rate and larval survival, suggesting that this gene is essential. Functional expression in vitro of Helicoverpa armigera GGPPS in Escherichia coli revealed a catalytically active enzyme. Next, we developed and optimised an enzyme assay to screen for potential inhibitors, such as the zoledronate and the minodronate, which showed a dose-dependent inhibition. Phylogenetic analysis of GGPPS across insects showed that GGPPS is highly conserved but also revealed several residues likely to be involved in substrate binding, which were substantially different in bee pollinator and human GGPPS. Considering the essentiality of GGPPS and its putative binding residue variability qualifies a GGPPS as a novel pesticide target. The developed assay may contribute to the identification of novel insecticide leads., (© 2023 The Royal Entomological Society.)
- Published
- 2024
- Full Text
- View/download PDF
37. Indomethacin and 20-hydroxyecdysone influence protein expression in a Spodoptera frugiperda nervous system cell line.
- Author
-
Wang Y, Buer B, Goodman CL, Kang D, Reall T, Dohn S, Ringbauer J Jr, Li Y, Geibel S, and Stanley D
- Subjects
- Humans, Animals, Spodoptera metabolism, Insecta metabolism, Cell Line, Hormones, Nervous System metabolism, Insect Proteins metabolism, Ecdysterone pharmacology, Ecdysterone metabolism, Indomethacin
- Abstract
Insecticide mode of action studies provide insights into how new insecticidal actives function and contribute to assessing safety to humans and nontarget organisms. Insect cell lines that express potential target sites can serve as valuable tools in this effort. In this paper, we report on the influence of two signaling molecules on protein expression in a nervous system cell line established from Spodoptera frugiperda (Bayer/BCIRL-SfNS2-0714-TR). We selected this line because we established it in our laboratory and we are experienced in using it. Cells were exposed to the insect developmental hormone (1 µg/mL 20-hydroxyecdysone, 20E) and/or a cyclooxygenase (COX) inhibitor (25 μM indomethacin, INDO; inhibits prostaglandin [PG] biosynthesis) for 24 h (Day 2), 72 h (Day 4), or 120 h (Day 6). We selected a PG biosynthesis inhibitor because PGs act in many aspects of insect biology, such as embryonic development, immunity, and protein phosphorylation. We selected the developmental hormone, 20E, because it also acts in fundamental aspects of insect biology. We identified specific proteins via in silico analysis. Changes in protein expression levels were determined using liquid chromatography-mass spectrometry (MS) + MS-MS. The largest number of changes in protein expression occurred on Day 2. The combination of 20E plus INDO led to 222 differentially expressed proteins, which documents the deep significance of PGs and 20E in insect biology. 20E and, separately, INDO led to changes in 30 proteins each (p value < 0.01; >2X or <0.5X-fold changes). We recorded changes in the expression of 9 or 12 proteins (20E), 10 or 6 proteins (INDO), and 21 or 20 proteins (20E + INDO) on D4 and D6, respectively. While the cell line was established from neuronal tissue, the differentially expressed proteins act in a variety of fundamental cell processes. In this paper, we moved beyond a list of proteins by providing detailed, Gene Ontology term analyses and enrichment, which offers an in-depth understanding of the influence of these treatments on the SfNS2 cells. Because proteins are active components of cell physiology in their roles as enzymes, receptors, elements of signaling transduction pathways, and cellular structures, changes in their expression levels under the influence of signaling molecules provide insights into their function in insect cell physiology., (© 2024 Wiley Periodicals LLC.)
- Published
- 2024
- Full Text
- View/download PDF
38. "I Have to Do It in Secrecy": Provider Perspectives on HIV Service Delivery and Quality of Care for Key Populations in Zambia.
- Author
-
Mulenga DM, Rosen JG, Banda L, Musheke M, Mbizvo MT, Raymond HF, Keating R, Witola H, Phiri L, Geibel S, Tun W, and Pilgrim N
- Subjects
- Humans, Zambia, Confidentiality, Quality of Health Care, Disclosure, HIV Infections prevention & control
- Abstract
Abstract: Key populations (KPs) experience suboptimal outcomes along the HIV care and prevention continua, but there is limited study of the challenges service providers encounter delivering HIV services to KPs, particularly in settings like Zambia, where provision of these services remains legally ambiguous. Seventy-seven providers completed in-depth interviews exploring constraints to HIV service delivery for KPs and recommendations for improving access and care quality. Thematic analysis identified salient challenges and opportunities to service delivery and quality of care for KPs, spanning interpersonal, institutional, and structural domains. Limited provider training in KP-specific needs was perceived to influence KP disclosure patterns in clinical settings, impeding service quality. The criminalization of KP sexual and drug use behaviors, coupled with perceived institutional and legal ambiguities to providing HIV services to KPs, cultivated unwelcoming service delivery environments for KPs. Findings elucidate opportunities for improving HIV service delivery/quality, from decentralized care to expanded legal protections for KPs and service providers., (Copyright © 2023 Association of Nurses in AIDS Care.)
- Published
- 2024
- Full Text
- View/download PDF
39. The complex II resistance mutation H258Y in succinate dehydrogenase subunit B causes fitness penalties associated with mitochondrial respiratory deficiency.
- Author
-
Njiru C, Saalwaechter C, Mavridis K, Vontas J, Geibel S, Wybouw N, and Van Leeuwen T
- Abstract
Background: The acaricides cyflumetofen, cyenopyrafen and pyflubumide inhibit the mitochondrial electron transport chain at complex II [succinate dehydrogenase (SDH) complex]. A target site mutation H258Y was recently discovered in a resistant strain of the spider mite pest Tetranychus urticae. H258Y causes strong cross-resistance between cyenopyrafen and pyflubumide, but not cyflumetofen. In fungal pests, fitness costs associated with substitutions at the corresponding H258 position that confer resistance to fungicidal SDH inhibitors have not been uncovered. Here, we used H258 and Y258 near-isogenic lines of T. urticae to quantify potential pleiotropic fitness effects on mite physiology., Results: The H258Y mutation was not associated with consistent significant changes of single generation life history traits and fertility life table parameters. In contrast, proportional Sanger sequencing and droplet digital polymerase chain reaction showed that the frequency of the resistant Y258 allele decreased when replicated 50:50 Y258:H258 experimentally evolving populations were maintained in an acaricide-free environment for approximately 12 generations. Using in vitro assays with mitochondrial extracts from resistant (Y258) and susceptible (H258) lines, we identified a significantly reduced SDH activity (48% lower activity) and a slightly enhanced combined complex I and III activity (18% higher activity) in the Y258 lines., Conclusion: Our findings suggest that the H258Y mutation is associated with a high fitness cost in the spider mite T. urticae. Importantly, while it is the most common approach, it is clear that only comparing life history traits and life table fecundity does not allow to reliably estimate fitness costs of target site mutations in natural pest populations. © 2023 Society of Chemical Industry., (© 2023 Society of Chemical Industry.)
- Published
- 2023
- Full Text
- View/download PDF
40. Author Correction: Mode of action of fluopyram in plant-parasitic nematodes.
- Author
-
Schleker ASS, Rist M, Matera C, Damijonaitis A, Collienne U, Matsuoka K, Habash SS, Twelker K, Gutbrod O, Saalwächter C, Windau M, Matthiesen S, Stefanovska T, Scharwey M, Marx MT, Geibel S, and Grundler FMW
- Published
- 2023
- Full Text
- View/download PDF
41. Mycobacterial type VII secretion systems.
- Author
-
Famelis N, Geibel S, and van Tol D
- Subjects
- Bacterial Proteins metabolism, Cell Membrane metabolism, Bacterial Secretion Systems metabolism, Type VII Secretion Systems chemistry, Type VII Secretion Systems metabolism, Mycobacterium tuberculosis chemistry
- Abstract
Mycobacteria, such as the pathogen M. tuberculosis , utilize up to five paralogous type VII secretion systems to transport proteins across their cell envelope. Since these proteins associate in pairs that depend on each other for transport to a different extent, the secretion pathway to the bacterial surface remained challenging to address. Structural characterization of the inner-membrane embedded secretion machineries along with recent advances on the substrates' co-dependencies for transport allow for the first time more detailed and testable models for secretion., (© 2023 Walter de Gruyter GmbH, Berlin/Boston.)
- Published
- 2023
- Full Text
- View/download PDF
42. Cell penetrating peptides are versatile tools for enhancing multimodal uptake into cells from pest insects.
- Author
-
Darif N, Vogelsang K, Vorgia E, Schneider D, Deligianni E, Geibel S, Vontas J, and Denecke S
- Subjects
- Animals, Biological Transport, Cell Membrane, Drug Delivery Systems, Insecta, Cell-Penetrating Peptides chemistry, Cell-Penetrating Peptides metabolism
- Abstract
Cell penetrating peptides (CPPs) are small peptides defined by their ability to deliver molecular cargo into cells. While the subject of frequent investigation for pharmaceutical drug delivery, little consideration has been given to the possibility of CPPs for use as insecticides or insecticide enhancers. Here, we characterize the entry of four fluorescently tagged CPPs into two insect cell lines and dissected midgut tissues in terms of both total quantity and mode of penetration. Fluorescent microscopy showed that substantial amounts of CPPs penetrate the plasma membrane via endosomal uptake in ovarian (Sf9) and midgut derived (AW1) lepidopteran cells and that this process was sensitive to selected endocytosis inhibitors. Differences in the quantity of uptake was observed between CPPs, and further differences were found in the ability CPP-1838 to efficiently penetrate membranes through passive diffusion. These findings were extended to primary midgut derived cells and dissected tissues suggesting that CPPs show a preference for goblet cells and that CPP-1838 shows far higher rates of penetration. CPP-1838 thus shows extraordinary abilities to penetrate cells efficiency in both a diffusional and endocytotic manner. From these results more sophisticated delivery methods based on the utilization of CPPs can be developed., (Copyright © 2022. Published by Elsevier Inc.)
- Published
- 2023
- Full Text
- View/download PDF
43. Activity, selection response and molecular mode of action of the isoxazoline afoxolaner in Tetranychus urticae.
- Author
-
Mermans C, Dermauw W, Geibel S, and Van Leeuwen T
- Subjects
- Animals, Dogs
- Abstract
Background: Afoxolaner is a novel representative of the isoxazolines, a class of ectoparasiticides which has been commercialized for the control of tick and flea infestations in dogs. In this study, the biological efficacy of afoxolaner against the two-spotted spider mite Tetranychus urticae was evaluated. Furthermore, as isoxazolines are known inhibitors of γ-aminobutyric acid-gated chloride channels (GABACls), the molecular mode of action of afoxolaner on T. urticae GABACls (TuRdls) was studied using functional expression in Xenopus oocytes followed by two-electrode voltage-clamp (TEVC) electrophysiology, and results were compared with inhibition by fluralaner, fipronil and endosulfan. To examine the influence of known GABACl resistance mutations, H301A, I305T and A350T substitutions in TuRdl1 and a S301A substitution in TuRdl2 were introduced., Results: Bioasassays revealed excellent efficacy of afoxolaner against all developmental stages and no cross-resistance was found in a panel of strains resistant to most currently used acaricides. Laboratory selection over a period of 3 years did not result in resistance. TEVC revealed clear antagonistic activity of afoxolaner and fluralaner for all homomeric TuRdl1/2/3 channels. The introduction of single, double or triple mutations to TuRdl1 and TuRdl2 did not lower channel sensitivity. By contrast, both endosulfan and fipronil had minimal antagonistic activities against TuRdl1/2/3, and channels carrying single mutations, whereas the sensitivity of double and triple TuRdl1 mutants was significantly increased., Conclusions: Our results demonstrate that afoxolaner is a potent antagonist of GABACls of T. urticae and has a powerful mode of action to control spider mites. © 2022 Society of Chemical Industry., (© 2022 Society of Chemical Industry.)
- Published
- 2023
- Full Text
- View/download PDF
44. Functional characterization of putative ecdysone transporters in lepidopteran pests.
- Author
-
Samantsidis GR, Fotiadou M, Tzavellas S, Geibel S, Nauen R, Swevers L, Denecke S, and Vontas J
- Subjects
- Animals, Ecdysone metabolism, Phylogeny, Larva, Spodoptera genetics, Spodoptera metabolism, Insecta metabolism, Moths, Organic Anion Transporters genetics
- Abstract
The insect steroid hormone ecdysone plays a critical role in insect development. Several recent studies have shown that ecdysone enters cells through Organic Anion Transporting Polypeptides (OATPs) in insects such as flies and mosquitoes. However, the conservation of this mechanism across other arthropods and the role of this transporter in canonical ecdysone pathways are less well studied. Herein we functionally characterized the putative ecdysone importer (EcI) from two major agricultural moth pests: Helicoverpa armigera (cotton bollworm) and Spodoptera frugiperda (fall armyworm). Phylogenetic analysis of OATP transporters across the superphylum Ecdysozoa revealed that EcI likely appeared only at the root of the arthropod lineage. Partial disruption of EcI in S. frugiperda decreased embryo hatching rate and larval survival, suggesting that this gene is essential for development in vivo. Depletion and re-expression of EcI in the lepidoptera cell line RP-HzGUT-AW1(MG) demonstrated this protein's ability to control ecdysone mediated signaling in gene regulation, its role in ecdysone mediated cell death, and its sensitivity to rifampicin, a well-known organic anion transporter inhibitor. Overall, this work sheds light on ecdysone uptake mechanisms across insect species and broadens our knowledge of the physiological roles of OATPs in the transportation of endogenous substrates., Competing Interests: Declaration of competing interest The authors declare no competing interests., (Copyright © 2022. Published by Elsevier Ltd.)
- Published
- 2022
- Full Text
- View/download PDF
45. Long-term survey and characterization of cyflumetofen resistance in Tetranychus urticae populations from Turkey.
- Author
-
İnak E, Alpkent YN, Saalwaechter C, Albayrak T, İnak A, Dermauw W, Geibel S, and Van Leeuwen T
- Subjects
- Animals, Turkey, Propionates toxicity, Tetranychidae genetics, Acaricides pharmacology
- Abstract
The two-spotted spider mite, Tetranychus urticae Koch (Acari: Tetranychidae) is the most economically important mite pest in agricultural areas and chemical acaricides are widely used to control T. urticae populations. Cyflumetofen is a recently introduced acaricide that inhibits the mitochondrial electron transport chain at complex II (succinate dehydrogenase, SDH), which represents the most recently developed mode of action for mite control worldwide. In the present study, started upon the launch of cyflumetofen in Turkey, a five-year survey was performed to monitor cyflumetofen susceptibility in 28 T. urticae populations collected from agricultural fields across the country. The first resistance case that might cause control failure in practical field conditions was uncovered in 2019, three years after the registration of cyflumetofen. In addition, an extremely resistant population (1722-fold resistance) was also detected towards the end of 2019. Cyflumetofen resistance did not decrease in the laboratory after relaxation of selection pressure for over one year in field-collected populations, suggesting the absence of a fitness cost associated with resistance in these populations. Next to phenotypic resistance, metabolic and physiological mechanisms underlying the decreased susceptibility were also investigated. Synergism assays showed the involvement of P450 monooxygenases in cyflumetofen resistance. Downregulation of carboxylesterases as resistance mechanism, is underpinned by the fact that pre-treatment with esterase inhibitor DEF decreased cyflumetofen toxicity in field-collected strains. Furthermore, a novel H258L substitution in the subunit B of complex II was uncovered in a field population. In silico modeling of the new mutation suggested that the mutation might indeed influence toxicity to complex II inhibitors cyenopyrafen and pyflubumide, but most likely not cyflumetofen. However, further studies are needed to uncover the exact role of this mutation in resistance to this new class of complex II inhibitors., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
46. Mode of action of fluopyram in plant-parasitic nematodes.
- Author
-
Schleker ASS, Rist M, Matera C, Damijonaitis A, Collienne U, Matsuoka K, Habash SS, Twelker K, Gutbrod O, Saalwächter C, Windau M, Matthiesen S, Stefanovska T, Scharwey M, Marx MT, Geibel S, and Grundler FMW
- Subjects
- Amino Acids pharmacology, Animals, Benzamides pharmacology, Mammals, Pyridines, Caenorhabditis elegans, Tylenchoidea
- Abstract
Plant-parasitic nematodes (PPN) are responsible for severe yield losses in crop production. Management is challenging as effective and safe means are rare. Recently, it has been discovered that the succinate dehydrogenase (SDH) inhibitor fluopyram is highly effective against PPN while accompanying an excellent safety profile. Here we show that fluopyram is a potent inhibitor of SDH in nematodes but not in mammals, insects and earthworm, explaining the selectivity on molecular level. As a consequence of SDH inhibition, fluopyram impairs ATP generation and causes paralysis in PPN and Caenorhabditis elegans. Interestingly, efficacy differences of fluopyram amongst PPN species can be observed. Permanent exposure to micromolar to nanomolar amounts of fluopyram prevents Meloidogyne spp. and Heterodera schachtii infection and their development at the root. Preincubation of Meloidogyne incognita J2 with fluopyram followed by a recovery period effectively reduces gall formation. However, the same procedure does not inhibit H. schachtii infection and development. Sequence comparison of sites relevant for ligand binding identified amino acid differences in SDHC which likely mediate selectivity, coincidently revealing a unique amino acid difference within SDHC conserved among Heterodera spp. Docking and C. elegans mutant studies suggest that this minute difference mediates altered sensitivity of H. schachtii towards fluopyram., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
47. QTL mapping suggests that both cytochrome P450-mediated detoxification and target-site resistance are involved in fenbutatin oxide resistance in Tetranychus urticae.
- Author
-
De Beer B, Villacis-Perez E, Khalighi M, Saalwaechter C, Vandenhole M, Jonckheere W, Ismaeil I, Geibel S, Van Leeuwen T, and Dermauw W
- Subjects
- Adenosine Triphosphate pharmacology, Animals, Cytochrome P-450 Enzyme System genetics, Organotin Compounds, Acaricides pharmacology, Tetranychidae genetics
- Abstract
The organotin acaricide fenbutatin oxide (FBO) - an inhibitor of mitochondrial ATP-synthase - has been one of the most extensively used acaricides for the control of spider mites, and is still in use today. Resistance against FBO has evolved in many regions around the world but only few studies have investigated the molecular and genetic mechanisms of resistance to organotin acaricides. Here, we found that FBO resistance is polygenic in two genetically distant, highly resistant strains of the spider mite Tetranychus urticae, MAR-AB and MR-VL. To identify the loci underlying FBO resistance, two independent bulked segregant analysis (BSA) based QTL mapping experiments, BSA MAR-AB and BSA MR-VL, were performed. Two QTLs on chromosome 1 were associated with FBO resistance in each mapping experiment. At the second QTL of BSA MAR-AB, several cytochrome P450 monooxygenase (CYP) genes were located, including CYP392E4, CYP392E6 and CYP392E11, the latter being overexpressed in MAR-AB. Synergism tests further implied a role for CYPs in FBO resistance. Subunit c of mitochondrial ATP-synthase was located near the first QTL of both mapping experiments and harbored a unique V89A mutation enriched in the resistant parents and selected BSA populations. Marker-assisted introgression into a susceptible strain demonstrated a moderate but significant effect of the V89A mutation on toxicity of organotin acaricides. The impact of the mutation on organotin inhibition of ATP synthase was also functionally confirmed by ATPase assays on mitochondrial preparations. To conclude, our findings suggest that FBO resistance in the spider mite T. urticae is a complex interplay between CYP-mediated detoxification and target-site resistance., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
48. Characterization of a novel pesticide transporter and P-glycoprotein orthologues in Drosophila melanogaster .
- Author
-
Denecke S, Bảo Lương HN, Koidou V, Kalogeridi M, Socratous R, Howe S, Vogelsang K, Nauen R, Batterham P, Geibel S, and Vontas J
- Subjects
- ATP Binding Cassette Transporter, Subfamily B pharmacology, ATP Binding Cassette Transporter, Subfamily B, Member 1 genetics, ATP Binding Cassette Transporter, Subfamily B, Member 1 pharmacology, ATP-Binding Cassette Transporters, Animals, Animals, Genetically Modified, Drosophila melanogaster, Insecticide Resistance genetics, Mammals, Mosquito Vectors, Anopheles, Insecticides toxicity, Malaria, Pesticides toxicity
- Abstract
Pesticides remain one of the most effective ways of controlling agricultural and public health insects, but much is still unknown regarding how these compounds reach their targets. Specifically, the role of ABC transporters in pesticide absorption and excretion is poorly understood, especially compared to the detailed knowledge about mammalian systems. Here, we present a comprehensive characterization of pesticide transporters in the model insect Drosophila melanogaster . An RNAi screen was performed, which knocked down individual ABCs in specific epithelial tissues and examined the subsequent changes in sensitivity to the pesticides spinosad and fipronil. This implicated a novel ABC drug transporter, CG4562, in spinosad transport, but also highlighted the P-glycoprotein orthologue Mdr65 as the most impactful ABC in terms of chemoprotection. Further characterization of the P-glycoprotein family was performed via transgenic overexpression and immunolocalization, finding that Mdr49 and Mdr50 play enigmatic roles in pesticide toxicology perhaps determined by their different subcellular localizations within the midgut. Lastly, transgenic Drosophila lines expressing P-glycoprotein from the major malaria vector Anopheles gambiae were used to establish a system for in vivo characterization of this transporter in non-model insects. This study provides the basis for establishing Drosophila as a model for toxicology research on drug transporters.
- Published
- 2022
- Full Text
- View/download PDF
49. A H258Y mutation in subunit B of the succinate dehydrogenase complex of the spider mite Tetranychus urticae confers resistance to cyenopyrafen and pyflubumide, but likely reinforces cyflumetofen binding and toxicity.
- Author
-
Njiru C, Saalwaechter C, Gutbrod O, Geibel S, Wybouw N, and Van Leeuwen T
- Subjects
- Acrylonitrile analogs & derivatives, Animals, Mutation, Propionates, Pyrazoles, Succinate Dehydrogenase genetics, Succinate Dehydrogenase metabolism, Acaricides metabolism, Acaricides pharmacology, Tetranychidae genetics, Tetranychidae metabolism
- Abstract
Succinate dehydrogenase (SDH) inhibitors such as cyflumetofen, cyenopyrafen and pyflubumide, are selective acaricides that control plant-feeding spider mite pests. Resistance development to SDH inhibitors has been investigated in a limited number of populations of the spider mite Tetranychus urticae and is associated with cytochrome P450 based detoxification and target-site mutations such as I260 T/V in subunit B and S56L in subunit C of SDH. Here, we report the discovery of a H258Y substitution in subunit B of SDH in a highly pyflubumide resistant population of T. urticae. As this highly conserved residue corresponds to one of the ubiquinone binding residues in fungi and bacteria, we hypothesized that H258Y could have a strong impact on SDH inhibitors toxicity. Marker assisted introgression and toxicity bioassays revealed that H258Y caused high cross resistance between cyenopyrafen and pyflubumide, but increased cyflumetofen toxicity. Resistance associated with H258Y was determined as dominant for cyenopyrafen, but recessive for pyflubumide. In vitro SDH assays with extracted H258 mitochondria showed that cyenopyrafen and the active metabolites of pyflubumide and cyflumetofen, interacted strongly with complex II. However, a clear shift in IC50s was observed for cyenopyrafen and the metabolite of pyflubumide when Y258 mitochondria were investigated. In contrast, the mutation slightly increased affinity of the cyflumetofen metabolite, likely explaining its increased toxicity for the mite lines carrying the substitution. Homology modeling and ligand docking further revealed that, although the three acaricides share a common binding motif in the Q-site of SDH, H258Y eliminated an important hydrogen bond required for cyenopyrafen and pyflubumide binding. In addition, the hydrogen bond between cyenopyrafen and Y117 in subunit D was also lost upon mutation. In contrast, cyflumetofen affinity was enhanced due to an additional hydrogen bond to W215 and hydrophobic interactions with the introduced Y258 in subunit B. Altogether, our findings not only highlight the importance of the highly conserved histidine residue in the binding of SDH inhibitors, but also reveal that a resistance mutation can provide both positive and negative cross-resistance within the same acaricide mode of action group., (Copyright © 2022. Published by Elsevier Ltd.)
- Published
- 2022
- Full Text
- View/download PDF
50. Identification of Helicoverpa armigera promoters for biotechnological applications.
- Author
-
Samantsidis GR, Denecke S, Swevers L, Skavdis G, Geibel S, and Vontas J
- Subjects
- Animals, Biotechnology, Gene Knockout Techniques, Promoter Regions, Genetic, Moths genetics, Moths metabolism, RNA Polymerase II genetics, RNA Polymerase II metabolism
- Abstract
Helicoverpa armigera and Helicoverpa zea are highly polyphagous major agricultural pests with a global distribution. Their control is based on insecticides, however, new, effective, and environmentally friendly control tools are required to be developed and validated. In an effort to facilitate the development of advanced biotechnological tools in these species that will take advantage of new powerful molecular biology techniques like CRISPR/Cas9, we used available transcriptomic data and literature resources, in order to identify RNA polymerase II and III promoters active in RP-HzGUT-AW1(MG), a midgut derived cell line from Helicoverpa zea. Following functional analysis in insect cell lines, four RNA polymerase II promoters from the genes HaLabial, HaTsp-2A, HaPtx-I and HaCaudal were found to exhibit high transcriptional activity in vitro. The HaTsp-2A promoter did not exhibit any activity in the non-midgut derived cell lines Sf-9 and Hi-5 despite high sequence conservation among Lepidoptera, suggesting that it may function in a gut specific manner. Furthermore, considering the utility of RNA polymerase III U6 promoters in methodologies such as RNAi and CRISPR/Cas9, we identified and evaluated four different U6 promoters of H. armigera. In vitro experiments based on luciferase and GFP reporter assays, as well as in vivo experiments targeting an essential gene of Helicoverpa, indicate that these U6 promoters are functional and can be used to experimentally silence or knockout target genes through the expression of shRNAs and sgRNAs respectively. Taking our findings together, we provide a set of promoters useful for the genetic manipulation of Helicoverpa species, that can be used in various applications in the context of agricultural biotechnology., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.