143 results on '"Gehrke CW"'
Search Results
2. Characterization of a unique enzyme complex composed of S-adenosyl-L- methionine-tRNA-methyltransferase and aminoacyl-tRNA synthetase activities
- Author
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Agris, PF, Setzer, D, and Gehrke, CW
- Published
- 1977
3. In vitro binding of iron with the cation-exchange resin sodium polystyrene sulfonate.
- Author
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O'Connor TA, Gruner BA, Gehrke JC, Watling SM, and Gehrke CW
- Subjects
- Cation Exchange Resins pharmacology, Ferrous Compounds metabolism, Humans, In Vitro Techniques, Iron poisoning, Polystyrenes pharmacology, Reactive Oxygen Species metabolism, Resins, Synthetic metabolism, Cation Exchange Resins metabolism, Iron metabolism, Polystyrenes metabolism
- Abstract
Study Objective: To investigate the ability of the cation exchange resin sodium polystyrene sulfonate to bind iron from ferrous sulfate solutions, along with the effects of pH on binding., Methods: We performed a series of in vitro experiments in which various concentrations of iron and sodium polystyrene sulfonate were combined and free ferrous iron was measured with the use of a colorimetric assay., Results: Sodium polystyrene sulfonate bound iron from ferrous sulfate solutions at pH 2 and pH 7. Slightly less binding of free ferrous iron was demonstrated in experiments performed at pH 7 than in those performed at pH 2. At pH 2, 98% of iron was bound, at pH 7, 95% of iron was bound., Conclusion: Sodium polystyrene sulfonate may be a useful therapy in acute iron poisoning once safety and efficacy are determined with the use of in vivo models.
- Published
- 1996
- Full Text
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4. In-vivo binding of lithium using the cation exchange resin sodium polystyrene sulfonate.
- Author
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Gehrke JC, Watling SM, Gehrke CW, and Zumwalt R
- Subjects
- Adult, Antidepressive Agents blood, Antidepressive Agents pharmacokinetics, Binding, Competitive, Drug Monitoring, Humans, Intestinal Absorption, Lithium Carbonate blood, Lithium Carbonate pharmacokinetics, Male, Metabolic Clearance Rate, Pilot Projects, Poisoning drug therapy, Time Factors, Antidepressive Agents poisoning, Cation Exchange Resins therapeutic use, Lithium Carbonate poisoning, Polystyrenes therapeutic use, Resins, Synthetic therapeutic use
- Abstract
The purpose of this study was to determine if the exchange resin sodium polystyrene sulfonate increases the clearance of lithium in a healthy volunteer. A single healthy volunteer received 900 mg lithium for each of three study phases. A sodium polystyrene sulfonate dose of either 0, 20, or 40 grams was administered one half hour after each lithium dose to assess the effect on lithium clearance. Multiple blood samples were obtained for serum lithium concentrations over a 36- to 48-hour time period. Pharmacokinetic parameter estimates were calculated and compared. Sodium polystyrene sulfonate was found to increase the clearance of lithium in a single volunteer. Sodium polystyrene sulfonate may be useful in the treatment of lithium intoxication by increasing the clearance of lithium.
- Published
- 1996
- Full Text
- View/download PDF
5. In vitro binding of lithium using the cation exchange resin sodium polystyrene sulfonate.
- Author
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Watling SM, Gehrke JC, Gehrke CW, Zumwalt R, and Pribble J
- Subjects
- Binding Sites, Charcoal pharmacokinetics, Humans, Hydrogen-Ion Concentration, Lithium poisoning, Poisoning drug therapy, Potassium pharmacokinetics, Lithium pharmacokinetics, Polystyrenes pharmacokinetics
- Abstract
Sodium polystyrene sulfonate, a cation exchange resin, should be useful in the treatment of lithium overdosage. This in vitro study was conducted to assess the ability of sodium polystyrene sulfonate to bind lithium, effects of pH on binding, binding efficacy in comparison to charcoal, and affinity for lithium versus potassium. Stock solutions of lithium were added to fixed amounts of sodium polystyrene sulfonate and charcoal. Lithium and potassium concentrations in supernatant were measured by flame photometry. Increasing concentrations of sodium polystyrene sulfonate bound more lithium. Changes in pH had little effect on lithium binding. Lithium is bound to sodium polystyrene sulfonate more readily than to charcoal. Potassium is preferentially bound to sodium polystyrene sulfonate over lithium. Sodium polystyrene sulfonate may provide a useful therapeutic modality in the treatment of lithium overdosage.
- Published
- 1995
- Full Text
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6. High-performance liquid chromatographic analysis of glycoamines in serum.
- Author
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Kuo KC, Gehrke JC, Allen WC, Holsbeke M, Li Z, Glinsky GV, Zumwalt RW, and Gehrke CW
- Subjects
- Biomarkers, Tumor, Chromatography, High Pressure Liquid, Humans, Neoplasms blood, Osteosarcoma blood, Reference Values, Spectrophotometry, Ultraviolet, Ultrafiltration, Glucosamine blood
- Abstract
This report describes the development of an HPLC-UV method for studies of glycoamines and glycoamine-like compounds in normal human serum and osteosarcoma patients serum as potential biological markers of cancer. The glycoamines, a newly recognized class of endogenous, low-molecular-mass biopolymers, are conjugates of amino acids and sugar units, containing 5 to 29 amino acid and 1 to 17 sugar units. After ultrafiltration of serum samples, reversed-phase HPLC separation with diode-array detection was used to obtain standard profiles of serum ultrafiltrates below M(r) 10,000 in healthy subjects. These highly reproducible profiles utilized two-dimensional peak identification and were used to develop a statistical profile of the major glycoamine peaks in normal serum. This newly developed analytical method was subsequently used to address a key question: whether or not there is a single tumor-specific glycoamine or a family of tumor-specific glycoamines in cancer patient serum. Preliminary results suggest that this method can separate and detect glycoamines and glycoamine-like compounds in various types of cancer patients serum with a high degree of reproducibility on the basis of comparative two-dimensional identification of natural compounds and a panel of synthetic glycoamine analogs. Moreover, the method is useful for following the relative changes in the amount of a given glycoamine over an extended clinical time course. Initial results suggest that a glycoamine or glycoamine-like compound, GA-4.63, may have clinical utility in human osteosarcoma studies.
- Published
- 1994
- Full Text
- View/download PDF
7. Undiscriminating codon reading with adenosine in the wobble position.
- Author
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Borén T, Elias P, Samuelsson T, Claesson C, Barciszewska M, Gehrke CW, Kuo KC, and Lustig F
- Subjects
- Base Sequence, Capsid genetics, Cell Line, Chromatography, Cloning, Molecular, Escherichia coli, Molecular Sequence Data, Mutagenesis, Site-Directed, Mycoplasma mycoides genetics, Adenosine genetics, Capsid Proteins, Codon, Protein Biosynthesis, RNA, Transfer, Gly genetics, RNA-Binding Proteins
- Abstract
To investigate the reading properties of adenosine in the wobble position we have used site-directed mutagenesis of the Escherichia coli glycine tRNA1(CCC) gene to substitute the nucleotide A in the wobble position of the corresponding tRNA. The effect of this change on the ability of the tRNA to discriminate between the nucleotides in the third position of the glycine codons has been investigated. We have compared the ability of the mutant glycine tRNA1(UCC) and glycine tRNA1(ACC) as well as the mycoplasma glycine tRNA(UCC) to read the glycine codons. The results showed that glycine tRNA1(ACC) unlike glycine tRNA1(UCC) did not fully discriminate between the glycine codons. These experiments were carried out using a new in vitro protein synthesizing system that allows us to monitor the reading of all four glycine codons. In the present paper we give a detailed description of this new in vitro system.
- Published
- 1993
- Full Text
- View/download PDF
8. Large-scale methylation patterns in the nuclear genomes of plants.
- Author
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Matassi G, Melis R, Kuo KC, Macaya G, Gehrke CW, and Bernardi G
- Subjects
- 5-Methylcytosine, Cell Nucleus, Cytosine analogs & derivatives, Cytosine metabolism, Genome, Methylation, DNA metabolism, Plants genetics
- Abstract
Methylation was investigated in compositional fractions of nuclear DNA preparations (50-100 kb in size) from five plants (onion, maize, rye, pea and tobacco), and was found to increase from GC-poor to GC-rich fractions. This methylation gradient showed different patterns in different plants and appears, therefore, to represent a novel, characteristic genome feature which concerns the noncoding, intergenic sequences that make up the bulk of the plant genomes investigated and mainly consist of repetitive sequences. The structural and functional implications of these results are discussed.
- Published
- 1992
- Full Text
- View/download PDF
9. Modified nucleosides in human serum.
- Author
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Mitchell EP, Evans L, Schultz P, Madsen R, Yarbro JW, Gehrke CW, and Kuo K
- Subjects
- Adult, Aged, Carcinoma blood, Chromatography, High Pressure Liquid, Female, Humans, Leukemia, Myelomonocytic, Acute blood, Lung Neoplasms blood, Male, Methylation, Middle Aged, Reference Values, Nucleosides blood
- Abstract
Methylated purines and pyrimidines derived from the degradation of transfer ribonucleic acid have been shown to be excreted in abnormal amounts in the urine of patients with cancer. Recent technology developed by Gehrke and Kuo has allowed the separation and quantification of modified nucleosides in serum using reversed-phase high-performance liquid chromatography with diode-array measurement. Serum levels of ten modified nucleosides were measured in 37 normal healthy adults to establish normal values and to correlate activity with age and sex. In addition, serum levels of patients with several malignancies were measured to determine activity in these diseases. Levels of modified nucleosides in normal individuals were consistently reproducible and showed no significant variation among males versus females or with age. Patients with malignant diseases showed consistent elevations and these were highest in patients with more advanced disease. The evidence of no significant differences in the mean levels of modified nucleosides in serum with age or sex in normal adults and elevations in patients with malignancies demonstrate the potential value of modified nucleosides as cancer biomarkers.
- Published
- 1992
- Full Text
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10. Reference intervals for eight modified nucleosides in serum in a healthy population from Italy and the United States.
- Author
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Pane F, Oriani G, Kuo KC, Gehrke CW, Salvatore F, and Sacchetti L
- Subjects
- Adult, Aged, Chromatography, High Pressure Liquid methods, Female, Humans, Italy, Male, Middle Aged, Reference Values, United States, Biomarkers, Tumor blood, Nucleosides blood
- Abstract
We used a recently devised HPLC method to quantify eight modified nucleosides, an emerging group of tumor markers, in human serum and then calculated their reference intervals in a healthy population from Italy and the United States. We used the statistical procedure of element analysis, which reveals the effects of chosen variables (in this case, nationality, sex, and age) on an analyte (here, modified nucleosides). Using element analysis, we calculated the exact weight of each variable on the reference values. We found that nationality has the greatest effect on the serum concentrations of all the modified nucleosides apart from pseudouridine, whereas sex significantly influences only the concentrations of 4-pyridone-3-carboxamide-N1-ribofuranoside, 1-methylinosine and N2,N2-dimethylguanosine; age affects only N2,N2-dimethylguanosine. Thus, the reference intervals of all the nucleosides except pseudouridine were calculated separately for Italians and Americans, and the reference values for 4-pyridone-3-carboxamide-N1-ribofuranoside, 1-methylinosine, and N2,N2-dimethylguanosine were calculated separately for men and women. Our data form the baseline for study of variations in serum concentrations of modified nucleosides in various pathophysiological conditions.
- Published
- 1992
11. O-ribosyl-phosphate purine as a constant modified nucleotide located at position 64 in cytoplasmic initiator tRNAs(Met) of yeasts.
- Author
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Glasser AL, Desgres J, Heitzler J, Gehrke CW, and Keith G
- Subjects
- Chromatography, High Pressure Liquid, Guanosine Monophosphate chemistry, Guanosine Monophosphate isolation & purification, Mass Spectrometry, Oxidation-Reduction, Periodic Acid metabolism, RNA, Transfer, Met genetics, Spectrophotometry, Ultraviolet, Candida genetics, Guanosine Monophosphate analogs & derivatives, RNA, Fungal chemistry, RNA, Transfer, Met chemistry, Schizosaccharomyces genetics
- Abstract
The unknown modified nucleotide G*, isolated from both Schizosaccharomyces pombe and Torulopsis utilis initiator tRNAs(Met), has been identified as an O-ribosyl-(1"----2')-guanosine-5"-phosphate, called Gr(p), by means of HPLC, UV-absorption, mass spectrometry and periodate oxidation procedures. By comparison with the previously published structure of Ar(p) isolated from Saccharomyces cerevisiae initiator tRNA(Met), the (1"----2')-glycosidic bond in Gr(p) has been postulated to have a beta-spatial conformation. The modified nucleotide Gr(p) is located at position 64 in the tRNA(Met) molecules, i.e. at the same position as Ar(p). Since we have also characterized Gr(p) in Candida albicans initiator tRNA(Met), the phosphoribosylation of purine 64 can be considered as a constant nucleotide modification in the cytoplasmic initiator tRNAs(Met) of all yeast species so far sequenced. Precise evidence for the presence of Gr(p) in initiator tRNAs(Met) of several plants is also reported.
- Published
- 1991
- Full Text
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12. Identification and structural characterization of O-beta-ribosyl-(1"----2')-adenosine-5"-phosphate in yeast methionine initiator tRNA.
- Author
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Keith G, Glasser AL, Desgrès J, Kuo KC, and Gehrke CW
- Subjects
- Adenosine Monophosphate analysis, Adenosine Monophosphate isolation & purification, Chromatography, High Pressure Liquid methods, Indicators and Reagents, Oxidation-Reduction, Adenosine Monophosphate analogs & derivatives, RNA, Transfer, Met chemistry, Saccharomyces cerevisiae genetics
- Abstract
We report in this paper on the complete structure determination of the modified nucleotide A*, now called Ar(p), that was previously identified in yeast methionine initiator tRNA as an isomeric form of O-ribosyl-adenosine bearing an additional phosphoryl-monoester group on its ribose2 moiety. By using the chemical procedure of periodate oxidation and subsequent beta-elimination with cyclohexylamine on mono- and dinucleotides containing Ar(p), we characterized the location of the phosphate group on the C-5" of the ribose2 moiety, and the linkage between the two riboses as a (1"----2')-glycosidic bond. Since the structural difference between phosphatase treated Ar(p) and authentic O-alpha-ribosyl-(1"----2')-adenosine from poly(ADP-Ribose) was previously assigned to an isomeric difference in the ribose2-ribose1 linkage, the (1"----2')-glycosidic bond of Ar(p) was deduced to have a beta-spatial configuration. Thus, final chemical structure for Ar(p) at the position 64 in yeast initiator tRNA(Met) has been established as O-beta-ribosyl-(1"----2')-adenosine-5"-phosphate. This nucleotide is linked by a 3',5'-phosphodiester bond to G at the position 65.
- Published
- 1990
- Full Text
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13. Eukaryotic tRNAs(Pro): primary structure of the anticodon loop; presence of 5-carbamoylmethyluridine or inosine as the first nucleoside of the anticodon.
- Author
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Keith G, Desgrès J, Pochart P, Heyman T, Kuo KC, and Gehrke CW
- Subjects
- Animals, Base Sequence, Cattle, Chickens, Chromatography, Molecular Sequence Data, Molecular Structure, Nucleic Acid Conformation, RNA, Fungal genetics, Spectrophotometry, Ultraviolet, Uridine analysis, Yeasts genetics, Anticodon analysis, Inosine analysis, RNA, Transfer analysis, RNA, Transfer, Amino Acid-Specific genetics, RNA, Transfer, Pro genetics, Uridine analogs & derivatives
- Abstract
The modified nucleoside U*, located in the first position of the anticodon of yeast, chicken liver and bovine liver tRNA(Pro) (anticodon U*GG), has been determined by means of TLC, HPLC, ultraviolet spectrum and gas chromatography-mass spectrometry. The structure was established as 5-carbamoylmethyluridine (ncm5U). In addition, we report on the primary structures of the above-mentioned tRNAs as well as those which have the IGG anticodon. In yeast, the two tRNA(Pro) (anticodons U*GG and IGG) differ by eight nucleotides, whereas in chicken and in bovine liver, both anticodons are carried by the same 'body tRNA' with one posttranscriptional exception at position 32, where pseudouridine is associated with ncm5U (position 34) in tRNA(Pro) (U*GG) and 2'-O-methylpseudouridine is associated with inosine (position 34) in tRNA(Pro) (IGG).
- Published
- 1990
- Full Text
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14. 5-[[(carboxymethyl)amino]methyl]uridine is found in the anticodon of yeast mitochondrial tRNAs recognizing two-codon families ending in a purine.
- Author
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Martin RP, Sibler AP, Gehrke CW, Kuo K, Edmonds CG, McCloskey JA, and Dirheimer G
- Subjects
- Chromatography, High Pressure Liquid, Mass Spectrometry methods, Mitochondria physiology, Molecular Structure, Purines, Saccharomyces cerevisiae ultrastructure, Spectrophotometry, Ultraviolet, Uridine genetics, Uridine isolation & purification, Anticodon genetics, RNA, Transfer genetics, RNA, Transfer, Amino Acid-Specific genetics, RNA, Transfer, Leu genetics, RNA, Transfer, Trp genetics, Uridine analogs & derivatives
- Abstract
The modified nucleoside (U*) present in the wobble position of Saccharomyces cerevisiae mitochondrial tRNA(Leu) and tRNA(Trp) was isolated by thin-layer chromatography and HPLC. Its chromatographic, UV spectral, and mass spectrometric properties were shown to be identical with those of 5- [[(carboxymethyl)amino]methyl]uridine (cmnm5U). This nucleoside found in yeast mitochondrial tRNAs reading two-codon families ending in a purine permits the selective recognition of A and G in the third codon position.
- Published
- 1990
- Full Text
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15. Polyamines--an improved automated ion-exchange method.
- Author
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Gehrke CW, Kuo KC, and Ellis RL
- Subjects
- Animals, Buffers, Cation Exchange Resins, Chromatography, Ion Exchange methods, Computers, Culture Media analysis, Humans, Hydrolysis, Muscles analysis, Neoplasms urine, Polyamines urine, Swine, Tissue Extracts analysis, Polyamines analysis
- Published
- 1977
- Full Text
- View/download PDF
16. Multiple biologic markers in the monitoring of treatment for patients with small cell carcinoma of the lung: the use of serial levels of plasma CEA and serum carbohydrates.
- Author
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Woo KB, Waalkes P, Abeloff MD, Ettinger DS, McNitt KL, and Gehrke CW
- Subjects
- Carcinoma, Small Cell drug therapy, Humans, Lung Neoplasms drug therapy, Neoplasm Recurrence, Local, Regression Analysis, Carbohydrates blood, Carcinoembryonic Antigen analysis, Carcinoma, Small Cell blood, Lung Neoplasms blood
- Abstract
The monitoring utility of serial patterns of a single marker (carcinoembryonic antigen) level and multiple marker (three carbohydrates-fucose, mannose and galactose) levels in patients with small cell carcinoma of the lung was investigated using a quantitative approach. A serial multiple regression (SMR) model was formulated to assess the disease response following the first to the tenth course of therapy and resulted in the multiple correlations ranging from 0.183 (NS)-0.706 (P less than 0.005) for CEA, and 0.502 (P less than 0.250)-0.760 (P less than 0.025) for three carbohydrates, respectively. The appraisal of these markers utilizing the SMR model points out that: (1) the serial levels of CEA greater than 5.0 ng/ml are significantly correlated with the disease course whereas the serial levels less than 5.0 ng/ml reflect the trend of variation in the disease course, but with less accuracy; and (2) the levels of three carbohydrates, any one elevated before and during therapy, are significantly correlated with the disease course.
- Published
- 1981
- Full Text
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17. Urinary polyamines for evaluating the course of disease for patients with small cell carcinoma of the lung.
- Author
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Woo KB, Waalkes TP, Abeloff MD, Lenhard RE Jr, Gehrke CW, and Kuo KC
- Subjects
- Carcinoma, Small Cell therapy, Carcinoma, Small Cell urine, Creatinine urine, Humans, Lung Neoplasms therapy, Lung Neoplasms urine, Neoplasm Metastasis, Putrescine urine, Regression Analysis, Spermidine urine, Spermine urine, Time Factors, Carcinoma, Small Cell pathology, Lung Neoplasms pathology, Polyamines urine
- Abstract
Clinical correlates with urinary excretion of polyamines were evaluated for 29 newly diagnosed and 35 previously treated patients with small cell carcinoma of the lung (SCC). The frequencies of pretreatment abnormalities were 12 (41%) for putrescine, 18 (62%) for spermidine, and 20 (69%) for spermine. In assessing disease parameters, the combined use of the abnormalities of spermidine and spermine as a discriminant was more effective than that of all three polyamines; it correlated significantly with extent of limited and extensive disease (P less than 0.001), and also resulted in significant separation of survival curves, the median survival of 11 months for both elevated compared to 19 months for neither or only one elevated (P = 0.062). No significant difference was seen in the abnormalities between no metastasis and one metastasis, whereas the frequencies of the abnormalities was highly increased in two or more metastases. The distribution of polyamines determined at regular treatment intervals showed distinctively more elevated patterns in progressive disease than in stable disease or partial and complete responses (P less than 0.01). In order to evaluate therapeutic effects on the relationship between polyamine excretion and tumor regression, correlations between urinary putrescine and spermidine were determined. The values of the ratio of spermidine to putrescine were significantly smaller in responders than in nonresponders (P less than 0.01); and these may be related to smaller tumor mass and higher tumor proliferative activity in responders, and larger tumor mass and lower tumor proliferative activity in nonresponders.
- Published
- 1983
- Full Text
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18. Pattern of undermethylation of the major satellite DNA of mouse sperm.
- Author
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Feinstein SI, Racaniello VR, Ehrlich M, Gehrke CW, Miller DA, and Miller OJ
- Subjects
- 5-Methylcytosine, Animals, Base Sequence, Chromatography, High Pressure Liquid methods, Cytosine analysis, DNA Restriction Enzymes, Deoxyribonucleosides analysis, Hydrolysis, Male, Methylation, Mice, Organ Specificity, Cytosine analogs & derivatives, DNA, Satellite isolation & purification, Spermatozoa analysis
- Abstract
Enzymatic hydrolysis and base analysis by high performance liquid chromatography showed that mouse satellite DNA had 30-50% less 5-methylcytosine in sperm than in somatic tissue (1.59 mols % vs 2.40-3.11 mols %). Maxam-Gilbert sequencing and analysis of the intensity of the cytosine bands indicated that the level of methylation of the eight CpGs of the consensus sequence in sperm satellite DNA ranged from 0 to about 50%, considerably lower than the levels reported in somatic tissues. The Mn1I site containing one of these CpGs was cut much more extensively in satellite DNA from sperm than from liver, confirming the undermethylation of this site in sperm DNA.
- Published
- 1985
- Full Text
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19. Biological markers in breast carcinoma--clinical correlations with pseudouridine, N2,N2-dimethylguanosine, and 1-methylinosine.
- Author
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Tormey DC, Waalkes TP, and Gehrke CW
- Subjects
- Antineoplastic Agents administration & dosage, Breast Neoplasms drug therapy, Drug Therapy, Combination, Female, Guanosine urine, Humans, Inosine urine, Lymphatic Metastasis, Breast Neoplasms urine, Guanosine analogs & derivatives, Inosine analogs & derivatives, Neoplasm Metastasis diagnosis, Pseudouridine urine, Uridine analogs & derivatives
- Abstract
Urinary levels of the minor nucleosides, pseudouridine (psi),N2, N2-dimethylguanosine (m22G), and 1-methylinosine (m1I), were investigated in patients with breast carcinoma. Elevated levels of psi were observed in 27/131 (20.6%) patients with metastatic disease, 1/14 (7.1%) preoperative patients, and 1/28 (3.6%) postoperative N+ patients. Elevated levels of m22G and M1I were observed, respectively, in 46/131 (35.1%) and 274131 (20.6%) patients with metastatic disease, 3/14 (21.4%) and 3/14 preoperative patients, and 6/28 (21.4%) and 2/28 (7.1%) postoperative N+ patients. There was no correlation between nucleoside levels and involvement of specific organ sites with metastatic disease, nor with chemotherapy response rate or time to treatment failure. During the treatment of metastatic disease there was a tendency for elevated pretherapy psi levels to decrease with attainment of a response and, if the levels subsequently rose to be associated with treatment failure. However, increasing levels of m22G and 71I occurred with both response and disease progression. These results suggest that routine measurement of the level of the urinary nucleosides would be of limited value for following the disease course in patients with breast cancer.
- Published
- 1980
- Full Text
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20. High turnover rate of transfer RNA in tumor tissue.
- Author
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Borek E, Baliga BS, Gehrke CW, Kuo CW, Belman S, Troll W, and Waalkes TP
- Subjects
- Aminoisobutyric Acids metabolism, Aminoisobutyric Acids urine, Animals, DNA, Neoplasm metabolism, Female, Half-Life, Humans, Neoplasms, Experimental metabolism, Neoplasms, Experimental urine, Rats, Rats, Inbred F344, Urinary Bladder Neoplasms urine, RNA, Neoplasm metabolism, RNA, Transfer metabolism, Urinary Bladder Neoplasms metabolism
- Abstract
Cancer patients and tumor-bearing animals excrete high levels of modified purines and pyrimidines some of which, e.g., N2,N2-dimethylguanosine, can originate only from transfer RNA (tRNA). Until recently, it could not be ascertained whether the high level of excretion of such compounds is due to cell death or specific tRNA turnover. However, an approach to this problem became feasible, with beta-aminoisobutyric acid as a probe. This compound is a terminal degradation product of thymine which is present in both DNA and tRNA. Since the pathway of synthesis of thymine is different in the two macromolecules, it and its end product, beta-aminoisobutyric acid can be differentially labeled with [14C]formate and [3H3]methylmethionine as precursors. Therefore the ratio of the two labels in the excreted beta-aminoisobutyric acid is a measure of the macromolecular origin of the degradation product. We have found from such analysis that tRNA's are not homogeneous in their turnover rate. There is a subpopulation that turns over much faster than the rest. The turnover rate of a subpopulation of tRNA's in tumor tissue exceeds the turnover rate of tRNA's in normal tissue. Such rapid degradation of tRNA's must be the source of the massive excretion of modified nucleosides by cancer patients which can be 10-fold higher than in normal subjects.
- Published
- 1977
21. DNA methylation in thermophilic bacteria: N4-methylcytosine, 5-methylcytosine, and N6-methyladenine.
- Author
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Ehrlich M, Gama-Sosa MA, Carreira LH, Ljungdahl LG, Kuo KC, and Gehrke CW
- Subjects
- 5-Methylcytosine, Adenine physiology, Cytosine physiology, Nucleic Acid Denaturation, Adenine analogs & derivatives, Bacteria genetics, Cytosine analogs & derivatives, DNA, Bacterial genetics, Methylation
- Abstract
While determining the minor and major base composition of the DNA from 17 types of thermophilic bacteria by high performance liquid chromatography (HPLC) of enzymatic digests, we have discovered a novel base, N4-methylcytosine (m4C). Its structure was proven by comparison of the DNA-derived nucleoside to the analogous authentic compound by HPLC, UV spectroscopy, and mass spectroscopy. Eight of the bacterial DNAs contained m4C. Only two contained the common minor base, 5-methylcytosine (m5C), and neither of these was from an extreme thermophile. The other prevalent modified base of bacterial DNA, N6-methyladenine (m6A), was found in nine of the DNAs. Restriction analysis revealed that four of the DNAs had dam-type (Gm6ATC) methylation patterns. Due to the propensity of m5C residues to be deaminated by heat to thymine residues and to inefficient repair of the resulting mismatched base pairs, thermophiles with optimal growth temperatures of greater than or equal to 60 degrees C generally may avoid having m5C in their genomes. Instead, some of them have deamination-resistant m4C residues.
- Published
- 1985
- Full Text
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22. Quantitative analysis of cystine, methionine, lysine, and nine other amino acids by a single oxidation--4 hour hydrolysis method.
- Author
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Gehrke CW, Rexroad PR, Schisla RM, Absheer JS, and Zumwalt RW
- Subjects
- Animal Feed analysis, Cystine analysis, Hydrolysis, Lysine analysis, Methionine analysis, Oxidation-Reduction, Plants analysis, Amino Acids analysis
- Abstract
The sulfur-containing amino acids cystine and methionine play important roles in animal, especially avian, nutrition. Because these sulfur-containing amino acids are destroyed to varying extents by 6N HCl hydrolysis, oxidation and hydrolysis of cystine to cysteic acid and methionine to methionine sulfone have been widely used for determination of cystine and methionine. Lysine is considered the next limiting amino acid after the sulfur amino acids in poultry nutrition; therefore, determination of the amino acid content of rations focuses first on these 3 amino acids. The objective of this investigation was to establish whether lysine and other amino acids could be accurately determined in proteinaceous materials which had undergone performic acid oxidation. To perform this evaluation, lysine was determined in a variety of protein-containing materials both with and without performic acid oxidation. Performic acid oxidation followed by 6N HCl hydrolysis at 145 degrees C for 4 h allows accurate measurement of 3 amino acids especially important to poultry nutrition, cystine, methionine, and lysine, in a single preoxidized hydrolysate; this method can be extended to another 9 protein amino acids.
- Published
- 1987
23. DNA methylation is not increased in mouse-human somatic cell hybrids.
- Author
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Feinstein SI, Miller DA, Ehrlich M, Gehrke CW, Eden LB, and Miller OJ
- Subjects
- Animals, Base Composition, Cell Fusion, Cell Line, Chromatography, High Pressure Liquid, Chromosomes, Human analysis, DNA analysis, Fibroblasts, Humans, Lymphocytes, Methylation, Mice, DNA metabolism, Hybrid Cells metabolism
- Abstract
The level of DNA methylation in three mouse-human cell lines that retained different human chromosomes and in the parental mouse and human lines has been determined by high-pressure liquid chromatography (HPLC). The level of methylation is similar in the hybrid and parental cells, indicating that interspecific somatic cell hybridization followed by preferential chromosome segregation can occur without an increase in overall DNA methylation.
- Published
- 1985
- Full Text
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24. Biologic markers in breast carcinoma. IV. Serum fucose-protein ratio. Comparisons with carcinoembryonic antigen and human chorionic gonadotrophin.
- Author
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Waalkes TP, Gehrke CW, Tormey DC, Woo KB, Kuo KC, Synder J, and Hansen H
- Subjects
- Female, Humans, Neoplasm Metastasis blood, Recurrence, Remission, Spontaneous, Breast Neoplasms blood, Carcinoembryonic Antigen analysis, Chorionic Gonadotropin blood, Fucose blood, Neoplasm Proteins blood
- Abstract
Serum fucose-protein ratio was evaluated as a potential biologic marker for patients with metastatic breast cancer. By analysis of the same blood samples, comparisons were made with carcinoembryonic antigen (CEA) and human chorionic gonadotrophin (hCG). For 150 patients with metastatic breast cancer, 85% had a value for serum-fucose protein ratio above the normal range in comparison to 75% for CEA and 40% for hCG. Serum fucose-protein ratio was exclusively increased in 12% of the patients, CEA in 4% and hCG in 2%. Both serum-fucose protein ratio and CEA were elevated in 39% of the patients, and together, either in combination of alone, were increased in 93% of the patients. Raised values for serum fucose-protein ratio as well as for CEA decreased with change in disease status from pretreatment to response for patients with measurable disease parameters and increased correspondingly with overt disease progression. Preliminary data indicate both serum fuxose-protein ratio and CEA frequently become elevated when patients progress from a disease free interval after surgery to recurrence.
- Published
- 1978
- Full Text
- View/download PDF
25. Biological markers and small cell carcinoma of the lung: a clinical evaluation of urinary ribonucleosides.
- Author
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Waalkes TP, Abeloff MD, Ettinger DS, Woo KB, Gehrke CW, Kuo KC, and Borek E
- Subjects
- Antineoplastic Agents therapeutic use, Carcinoma, Small Cell therapy, Carcinoma, Small Cell urine, Clinical Laboratory Techniques, Drug Therapy, Combination, Female, Follow-Up Studies, Humans, Lung Neoplasms therapy, Lung Neoplasms urine, Male, Carcinoma, Small Cell diagnosis, Lung Neoplasms diagnosis, Ribonucleosides urine
- Abstract
Five minor base ribonucleosides, primarily degradation products of transfer ribonucleic acid (tRNA), were evaluated as potential biological markers for patients with small cell carcinoma of the lung. The urinary concentration for pseudouridine, 1-methyladenosine, 1-methylinosine, N2-methylguanosine, and N2,N2-dimethylguanosine was determined by means of reversed-phase high performance liquid chromatography and quantitatively expressed as a function of creatinine excretion. Comparisons were made with carcinoembryonic antigen (CEA) plasma levels. The total frequency of elevated values for the five nucleosides in pretreatment urine samples was directly related to stage of disease with 24/60 (40%) determinations increased in 12 patients with limited disease and 69/85 (81%) in 17 patients with extensive disease. For these same patients, CEA levels were elevated respectively in 2/11 (18%) of the former and 9/17 (53%) of the latter group. The frequency and degree of elevation of the nucleoside/creatinine ratios in pretreatment samples from patients with extensive disease was correlated directly with increasing number of metastatic sites. Of the five nucleosides, the mean number elevated was two for limited disease, 3-4 for extensive disease with one metastatic site, 4 for two or three, and 5 for four or more sites of metastases. Based on a summation of pretreatment nucleoside/creatinine ratios, a discriminant for survival was derived giving curves separating patients (P = 0.086) similar to the discriminant based on stage of disease. Although discordant results were noted, an overall correlation of 75% agreement with clinical assessment was estimated in response categories when monitoring changes associated with therapy.
- Published
- 1982
- Full Text
- View/download PDF
26. Search for amino acids in Apollo returned lunar soil.
- Author
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Gehrke CW, Zumwalt RW, Kuo K, Ponnamperuma C, and Shimoyama A
- Subjects
- Amino Acids analysis, Extraterrestrial Environment
- Abstract
The lunar samples from Apollo flights 11 through 17 provided the students of chemical evolution with an opportunity of examining extraterrestrial materials for evidence of early prebiological chemistry in the solar system. Our search was directed to water-extractable compounds with emphasis on amino acids. Gas chromatography, ion-exchange chromatography and gas chromatography combined with mass spectrometry were used for the analysis. It is our conclusion that amino acids are not present in the lunar regolith above the background levels of our investigations.
- Published
- 1975
- Full Text
- View/download PDF
27. Nucleoside excretion in breast cancer: comparison with other biochemical tumour-index-substances.
- Author
-
Coombes RC, Powles TJ, Gehrke CW, Waalkes TP, and Neville AM
- Subjects
- Aminoisobutyric Acids urine, Female, Guanosine analogs & derivatives, Guanosine urine, Humans, Inosine analogs & derivatives, Inosine urine, Pseudouridine urine, Breast Neoplasms urine, Nucleosides urine
- Abstract
[We have measured four urinary nucleosides (dimethylguanosine, 1-methylinosine, pseudouridine and beta-aminoisobutyric acid)in patients with benign breast disease and patients with early and advanced breast cancer in order to assess their value as tumour-index-substances. We compared the results with other biochemical indices of breast cancer and sought and correlations between these indices. The results indicate that few abnormalities occurred in patients without overt metastases and these did not predict early relapse. In those with metastatic disease, dimethylguanosine excretion was most frequently elevated. Correlations were observed between some of the nucleosides and lysozyme and alpha1-antirypsin.
- Published
- 1979
28. Complete mass spectra of N-trifluoroacetyl-n-butyl esters of amino acids.
- Author
-
Leimer KR, Rice RH, and Gehrke CW
- Subjects
- Amino Acids, Diamino analysis, Amino Acids, Dicarboxylic analysis, Amino Acids, Sulfur analysis, Arginine analysis, Hydroxyproline analysis, Mass Spectrometry, Proline analysis, Pyrrolidonecarboxylic Acid analysis, Trifluoroacetic Acid, Amino Acids analysis
- Published
- 1977
- Full Text
- View/download PDF
29. High-performance liquid chromatographic analysis of biogenic amines in biological materials as o-phthalaldehyde derivatives.
- Author
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Davis TP, Gehrke CW, Gehrke CW Jr, Cunningham TD, Kuo KC, Gerhardt KO, Johnson HD, and Williams CH
- Subjects
- Animals, Biogenic Amines analysis, Biogenic Amines urine, Brain Chemistry, Cattle, Chromatography, High Pressure Liquid methods, Dopamine blood, Histamine blood, Norepinephrine blood, Normetanephrine blood, Octopamine blood, Rats, Serotonin blood, Tyramine blood, o-Phthalaldehyde, Biogenic Amines blood
- Abstract
A remarkably sensitive, simple and selective reversed-phase high-performance liquid chromatographic (HPLC) method has been developed, allowing, for the first time, the direct measurement of histamine, norepinephrine, octopamine, normetanephrine, dopamine, serotonin and tyramine in a single sample of plasma (2 ml), tissue (0.2 g), or urine. The biogenic amines were modified by pre-column derivatization with o-phthalaldehyde which stabilizes the molecules, aids in extraction, and improves HPLC detection at the nanogram level. To minimize losses during the sampling procedure a careful collection procedure was designed. We developed a simple sample cleanup in which the samples were thawed, neutralized with KOH, immediately derivatized, extracted into ethyl acetate (EtOAc) and then chromatographed by HPLC. The derivatives were stable in EtOAc for more then 24 h. Interfering amino acids were removed from the EtOAc by partitioning twice with Na2HPO4 buffer (pH 10.0). Complete separation was achieved in ca. 60--90 min on a muBondapak phenyl column using a stepwise gradient of acetonitrile and/or methanol-phosphate buffer (pH 5.1). A variable wavelength fluorometer with a 5-microliter flow-cell was used (excitation 340 nm; emission 480 nm). Linearity ranged from 200 pg to 50 ng onto the column. Precision (R.S.D.) for retention times was 1% and for derivatization and injection 2.5%. Recoveries of the seven biogenic amines from plasma spiked with 25 ng/ml averaged 70%, with a relative standard deviation of 6%. Separation studies were also done using a muBondapak C18 column. The effects of various eluents are presented. Gas-liquid chromatography was also investigated but lacked the sensitivity achieved by HPLC. The HPLC method is used routinely for the determination of biogenic amines in plasma from pigs with malignant hyperthemia and thermally stressed bovine. Significant differences in levels of biogenic amines were noted between stressed and non-stressed animals. Data on rat brain tissue samples were compared with the trihydroxyindole method and canine heart tissue was analyzed for ventricular norepinephrine and dopamine. Application of the method to urine from normal persons and a patient with a brain tumor has been demonstrated.
- Published
- 1979
- Full Text
- View/download PDF
30. DNA cytosine methylation and heat-induced deamination.
- Author
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Ehrlich M, Norris KF, Wang RY, Kuo KC, and Gehrke CW
- Subjects
- 5-Methylcytosine, Cytosine metabolism, DNA, Bacterial metabolism, Deamination, Escherichia coli genetics, Hot Temperature, Humans, Kinetics, Methylation, Thymine metabolism, Uracil metabolism, Cytosine analogs & derivatives, DNA, Single-Stranded metabolism
- Abstract
The heat-induced conversion of 5-methylcytosine (m5C) residues to thymine residues and of cytosine to uracil residues in single-stranded DNA was studied. The calculated rates for deamination at 37 degrees C and pH 7.4 were approximately 9.5 X 10(-10) and 2.1 X 10(-10) sec-1, respectively. N4-Methyldeoxycytidine, which is in the DNA of certain thermophilic bacteria, was more heat-resistant than was deoxycytidine and much more than was 5-methyldeoxycytidine. Thermophilic bacteria which contain N4-methylcytosine rather than m5C in their genomes may thereby largely avoid heat-induced mutation due to deamination, which is incurred by the many organisms that contain m5C in their DNA.
- Published
- 1986
- Full Text
- View/download PDF
31. Chromatography of nucleosides.
- Author
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Gehrke CW, Kuo KC, and Zumwalt RW
- Subjects
- Humans, Hydrogen-Ion Concentration, Methanol, Ribonucleotides urine, Temperature, Chromatography, High Pressure Liquid methods, Nucleosides urine
- Published
- 1980
- Full Text
- View/download PDF
32. The value of sequential marker estimations following mastectomy for breast cancer.
- Author
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Coombes RC, Powles TJ, Ford HT, Gazet JC, Gehrke CW, Keyser JW, Mitchell PE, Patel S, Stimson WH, Abbott M, Worwood M, and Neville AM
- Subjects
- Alkaline Phosphatase blood, Breast Neoplasms metabolism, Carcinoembryonic Antigen metabolism, Humans, Hydroxyproline urine, Postoperative Complications diagnosis, Time Factors, gamma-Glutamyltransferase blood, Breast Neoplasms surgery, Mastectomy, Neoplasm Metastasis diagnosis
- Published
- 1980
33. Beta-aminoaciduria in patients with Burkitt's lymphoma.
- Author
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Waalkes TP, Gehrke CW, Lakings DB, Zumwalt RW, Kuo KC, Jacobs SA, and Borek E
- Subjects
- Alanine urine, Amino Acids urine, Child, Child, Preschool, Humans, Aminoisobutyric Acids urine, Burkitt Lymphoma urine, Renal Aminoacidurias urine
- Abstract
The massive amounts of beta-aminoisobutyric acid (beta-AIBA) in the urine of Burkitt's lymphoma patients were measured along with other alpha-amino acids and beta-alanine present in normal and decreased levels. The ratios of the amount of beta-AIBA to beta-alanine, in mumoles/kg urine collected in 24 hours, were elevated for all patients. The degree of elevation of beta-AIBA excretion and the ratio of the two beta-amino acids appeared to be related to the amount of tumor mass present. These analyses may have possible value in monitoring patients with Burkitt's lymphoma during their disease course.
- Published
- 1976
- Full Text
- View/download PDF
34. Letter: Biochemical markers in Burkitt's lymphoma.
- Author
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Jacobs SA, Lakings DB, Gehrke CW, Anderson T, Ziegler JL, Waalkes TP, and Gehrke CW
- Subjects
- Aminoisobutyric Acids urine, Burkitt Lymphoma blood, Humans, L-Lactate Dehydrogenase blood, Nucleosides urine, Polyamines urine, Recurrence, Remission, Spontaneous, Burkitt Lymphoma urine
- Published
- 1976
- Full Text
- View/download PDF
35. Analysis of amino acids by gas chromatography as the N-trifluoroacetyl n-butyl esters.
- Author
-
Gehrke CW, Kuo KC, Kaiser FE, and Zumwalt RW
- Subjects
- Acylation, Animal Feed analysis, Animals, Cattle, Chromatography, Gas, Cysteine analysis, Esters, Hydrocarbons, Fluorinated analysis, Hydrolysis, Indicators and Reagents, Meat analysis, Methionine analysis, Plants analysis, Protein Hydrolysates analysis, Amino Acids analysis
- Abstract
This presentation describes amino acid analysis with the gas chromatographic method and experimental conditions using the N-trifluoroacetyl n-butyl ester derivatives; the study we describe here was undertaken to compare gas chromatographic (GC) and ion-exchange chromatographic (IEC) analyses of amino acids in hydrolysates of 9 diverse sample types to gain insight into effects of these 2 chromatographic methods of analysis on variation in amino acid results. Our study showed that values for samples prepared by 2 separate laboratories using the same procedure were generally in good agreement when all of the hydrolysates were analyzed by a single laboratory using a single method of analysis. To compare results from gas chromatography with those from ion-exchange chromatography analyses were performed by 2 different laboratories on the same hydrolysates and on different hydrolysates prepared by the same method by both laboratories. The data demonstrate that GC and IEC can be expected to yield essentially identical results when applied to the same hydrolysate. Agreement is so close that interlaboratory differences in hydrolysate preparation of the same sample contribute as much to variation in amino acid results as does the method of analysis, a fact which should be noted in planning collaborative studies.
- Published
- 1987
36. Immunocytoma effect upon circadian variation in murine urinary excretion of beta-aminoisobutyric acid, beta-alanine, phenylalanine and tyrosine.
- Author
-
Halberg F, Gehrke CW, Kuo K, Nelson WL, Sothern RB, Cadotte LM, Haus E, and Scheving LE
- Subjects
- Aminobutyrates urine, Animals, Diet, Light, Neoplasms, Experimental urine, Phenylalanine urine, Rats, Rats, Inbred Strains, Tyrosine urine, beta-Alanine urine, Amino Acids urine, Circadian Rhythm, Lymphoma urine
- Abstract
Under the conditions of disynchronization by the manipulation of both the alternation of light and darkness and the availability and unavailability of food, circadian rhythms characterize the excretion of several amino acids by inbred LOU rats bearing an immunocytoma. Large amplitude rhythms can be demonstrated for urinary beta-aminoisobutyric acid, beta-alanine, phenylalanine and tyrosine. Under the same conditions of disynchronization, control animals excrete the same compounds also with a marked circadian variation but at an invariably lower average rate. These excretory rhythms, along with those demonstrated earlier for polyamines and light-chains, are of interest as potential markers for the chronotherapy of cancer.
- Published
- 1978
37. Fatty acid profile and cholesterol in skeletal muscle of trained and untrained men.
- Author
-
Thomas TR, Londeree BR, Gerhardt KO, and Gehrke CW
- Subjects
- Adult, Aged, Fatty Acids, Unsaturated metabolism, Humans, Leg, Cholesterol metabolism, Fatty Acids metabolism, Membrane Lipids metabolism, Muscles metabolism, Physical Fitness
- Abstract
To compare the fatty acid distribution and cholesterol composition in trained and untrained isolated skeletal muscle membranes, a needle biopsy was performed on the vastus lateralis of the 10 distance runners and 10 sedentary men. The muscle sample was homogenized and centrifuged at 100,000 X g; the resulting pellet was analyzed by gas-liquid chromatography for individual fatty acids and cholesterol. The percentage of palmitic acid was significantly lower in the trained muscle tissue. Samples from the distance runners also tended to have a more frequent appearance of linolenic and eicosatrienoic acids, longer fatty acid hydrocarbon chains, and lower cholesterol concentration. It was concluded that trained muscles have an increased membrane fluidity which could beneficially affect the activity of membrane-bound enzymes and active transport. Longer chain length in the membrane lipids may be a means of producing an inner membrane cohesiveness in muscles of trained individuals.
- Published
- 1977
- Full Text
- View/download PDF
38. The nucleotide sequence of a major glutamine tRNA from rat liver.
- Author
-
Yang JA, Tai LW, Agris PF, Gehrke CW, and Wong TW
- Subjects
- Animals, Base Sequence, Nucleic Acid Conformation, Oligoribonucleotides analysis, RNA, Transfer, Amino Acyl isolation & purification, Rats, Rats, Inbred BUF, Ribonuclease T1, Liver metabolism, RNA, Transfer, Amino Acyl genetics
- Abstract
A major glutamine tRNA from rat liver was purified. Post-labeling techniques showed its nucleotide sequence to be: pG-G-U-U-C-C-A-U-m(1)G-G-U-G-psi-A-A-D-Gm-G-D-D-A-G-C-A-C-U-C-U-G-G-A-Cm-U-C-U-G-A-A-psi-C-C-A-G-C-G-A-U-m(5)C-m(5)C-G-A-G-psi-psi-C-A-m(1)A-A-U-C-U-C-G-G-U-G-G-A-A-C-C-U-C-C-A(OH).Images
- Published
- 1983
- Full Text
- View/download PDF
39. Gas-liquid chromatography of nucleosides. Effect of silylating reagents and solvents.
- Author
-
Gehrke CW and Patel AB
- Subjects
- Chromatography, Gas, Indicators and Reagents, Methods, Solvents, Trimethylsilyl Compounds, Nucleosides analysis
- Abstract
The aims of this investigation were to study the completeness of silylation of nucleosides with three different reagents, bis(trimethylsilyl)trifluoroacetamide (BSTFA), bis(trimethylsilyl)acetamide (BSA) and trimethylsilylimidazole (TMSI), and to investigate the effect of different solvents (acetonitrile, pyridine, dimethylformamide, chloroform, methylene chloride, hexane, benzene, and toluene) on quantitation of derivatization. Closed-tube silylations of the nucleosides were performed with BSTFA, BSA, and TMSI, and for the most complete silylation, the optimal time, temperature, and molar excess of reagent were: for BSTFA, 150 degrees-15 min and 225 molar excess; for TMSI, 60 degrees-3 h and 1000 molar excess; and for BSA, 120 degrees-2 h and 250 molar excess. Also, silylations of seven major and minor nucleosides were carried out using a 1000 molar excess of BSTFA, BSA, and TMSI at 25 degrees with 5 min sonication, and at optimal silylation conditions as described above for the three reagents. The silylating strengths were determined by the increase in RWR (= weight response of nucleoside/weight response of pyrene) values, and are summarized for the amino group containing nucleosides silylated at room temperature as BSTFA greater than TMSI greater than BSA, and for silylation under optimal conditions as BSTFA greater than BSA greater than TMSI. The efficiency of silylation for the hydroxyl group-containing nucleosides silylated at room temperature was BSTFA greater than TMSI greater than BSA, and for silylation under optimal conditions BSTFA greater than TMSI = BSA...
- Published
- 1977
- Full Text
- View/download PDF
40. Automated determination of urea and ammoniacal nitrogen (NPN) in animal feeds.
- Author
-
Wall LL and Gehrke CW
- Subjects
- Autoanalysis methods, Dietary Proteins analysis, Urease, Ammonia analysis, Animal Feed analysis, Nitrogen analysis, Urea analysis
- Abstract
A minor modification in the automated analytical system of the official AOAC semiautomated method for determining crude proteins results in an automated method for determining urea and ammoniacal nitrogen in animal feeds and their ingredients. Urease enzyme which has high activity, yields a clear solution in water, has low ammonia impurity, and is inexpensive is used in the automated method. Weights from 1 to 2.5 g feed sample are dissolved in water, and sample solutions are analyzed at the rate of 40 samples/h. Five AAFCO feed check samples were analyzed repeatedly by the automated method, and results were compared with the grand averages from the check sample reports. The official AOAC manual urease method was used by AAFCO participants. Average recovery of urea and ammoniacal nitrogen was 100.6% by the automated method relative to the AAFCO reported averages. The range of recoveries as 98.5-102.7%. The non-protein nitrogen (NPN) concentrations, expressed as protein equivalent, ranged from 3.40 to 63.04% protein on these samples. The average relative standard deviation for the automated analyses was 0.77%, compared with 1.54% for the manual method. This method is an important adjunct to laboratories using or considering use of the semiautomated method for crude protein and needing further information on NPN.
- Published
- 1981
41. Biologic markers in breast carcinoma: clinical correlations with urinary polyamines.
- Author
-
Tormey DC, Waalkes TP, Kuo KC, and Gehrke CW
- Subjects
- Breast Neoplasms secondary, Cadaverine urine, Female, Humans, Polyamines pharmacology, Prognosis, Putrescine urine, Spermidine urine, Spermine urine, Breast Neoplasms urine, Polyamines urine
- Abstract
Urinary polyamine levels were evaluated in patients with breast carcinoma. The individual levels of putrescine, spermidine, spermine, and cadaverine, and the product/precursor levels of putrescine, spermidine, and spermine were analyzed. Elevations of one or more individual polyamines or of the ratios were found in 50% of patients with metastatic disease, 38.5% of preoperative patients, and 35.7% of 5--24 week postoperative N + patients. Sequential sampling of patients with metastatic disease suggested that changes in elevated polyamine levels tend to reflect the clinical course of the disease, especially for the association of treatment failure with rising elevated values. The presence of one or more elevated parameters prior to treatment of metastatic disease tended to be associated with a higher response rate (85.7 vs. 68.4%) than all normal levels. Five of nine patients who recurred postoperatively had preceding postoperative polyamine elevations. In addition, there was a trend for a shorter disease-free time among patients with one of more elevated polyamine parameters between 5--24 weeks postoperatively than among patients with normal parameters. These data suggest that measurement of urinary polyamine levels, including calculation of the product/precursor levels, may be a useful clinical adjunct in the management of patients with breast carcinoma.
- Published
- 1980
- Full Text
- View/download PDF
42. Polyamines in some tarantula venoms.
- Author
-
Cabbiness SG, Gehrke CW, Kuo KC, Chan TK, Hall JE, Hudiburg SA, and Odell GV
- Subjects
- Cadaverine analysis, Putrescine analysis, Spermidine analysis, Spermine analysis, Arthropod Venoms analysis, Polyamines analysis, Spider Venoms analysis
- Published
- 1980
- Full Text
- View/download PDF
43. Gas-liquid chromatography of nucleosides. Derivatization and chromatography.
- Author
-
Gehrke CW and Patel AB
- Subjects
- Adenosine analysis, Chromatography, Liquid, Cytidine analysis, Deoxyribonucleosides analysis, Fluoroacetates, Guanosine analysis, Inosine analysis, Methods, Ribonucleosides analysis, Thymidine analysis, Trimethylsilyl Compounds analysis, Uridine analysis, Chromatography, Gas, Nucleosides analysis
- Abstract
The aims of this investigation were to establish the optimum reaction conditions for silylation of nucleotides with bis(trimethylsilyl)trifluoroacetamide (BSTFA) and to investigate the chromatographic properties of the following nucleosides: adenosine, guanosine, cytidine, thymine, inosine, xanthosine, and uridine. Closed tube silylations were performed with a 1000 molar excess of BSTFA at 25, 75, 120, 150, and 175 degrees for 15, 30, 60, 120 and 240 min. The optimal time and temperature for derivatization were found to be 150 degrees and 15 min. Using these reaction conditions, samples were then silylated with 50, 100, 200, 500, and 1000 molar excess of BSTFA; a molar excess of 225 was best. The stability of the nucleoside derivatives on standing at room temperature for 1-7 days was investigated. Quantitative gas-liquid chromatography of trimethylsilyl (TMS) nucleosides can be performed if samples are analyzed within 48 h, after which time the relative weight response for the nucleosides decreased somewhat. Chromatographic column studies were made using various liquid phases and supports. With methylsiloxanes as the liquid phase, Supelcoport as support was found to be superior. Resolution of TMS guanosine from TMS cytidine was attempted at different column lengths using 3% (w/w) SE-30 on Supelcoport, different loadings (%, w/w) of SE-30 on Supelcoport, and different polarity liquid phases, 4% (w/w) OV-11 or 3% (w/w) OV-17 or 4% (w/w) Dexsil-300 on Supelcoport. A complete separation of the six ribonucleosides including guanosine and cytidine was obtained with 1 m x 4 mm I.D. glass columns of 4% (w/w) OV-11 and 3% (w/w) OV-17 on 100-120 mesh Supelcoport. It was observed that with 2'-deoxycytidine, one obtains the TMS cytosine peak (retention temperature 150 degrees) plus another peak with a retention temperature of 120 degrees, under all derivatization conditions with BSTFA and bis(trimethylsilyl)-acetamide. Similar formation of bases from other 2'-deoxyribonucleosides occurred when the molar excess of BSTFA was greater than 500. The minimal detectable amounts obtained for all the nucleosides ranged from 5 to 10 ng injected with a signal-to-noise ratio of 3. The relative standard deviations for all nucleosides and deoxynucleosides ranged from 1.2 to 4.8% on different methylsiloxanes on Supelcoport columns.
- Published
- 1976
- Full Text
- View/download PDF
44. The urinary excretion of nucleosides of ribonucleic acid by patients with advanced cancer.
- Author
-
Waalkes TP, Gehrke CW, Zumwalt RW, Chang SY, Lakings DB, Tormey DC, Ahmann DL, and Moertel CG
- Subjects
- Chromatography, Gas methods, Guanosine urine, Humans, Inosine urine, Neoplasms enzymology, Neoplasms metabolism, RNA, Transfer metabolism, tRNA Methyltransferases metabolism, Guanosine analogs & derivatives, Inosine analogs & derivatives, Neoplasms urine, Pseudouridine urine, RNA metabolism, Uridine analogs & derivatives
- Abstract
By means of a sensitive and specific method utilizing gas-liquid chromatography, the excretion levels for three nucleosides, degradation minor base products of ribonucleic acid, primarily transfer ribonucleic acid, were determined in 24-hour urine specimens from over 200 patients with solid tumor malignancies. These nucleosides were N2,N2-dimethylguanosine, l-methylinosine, and pseudouridine. When compared to normal control values, elevated levels of these compounds were found for patients in each of several tumor types studied. Increases in pseudouridine excretion suggest increased tumor transfer ribonucleic acid turnover; in addition, for the methylated nucleosides, higher than normal values may reflect enhanced transfer ribonucleic acid methylase activity of the neoplastic cells.
- Published
- 1975
- Full Text
- View/download PDF
45. Urinary excretion of polyamines by patients with advanced malignancy.
- Author
-
Waalkes TP, Gehrke CW, Tormey DC, Zumwalt RW, Hueser JN, Kuo KC, Lakings DB, Ahmann DL, and Moertel CG
- Subjects
- Adult, Cadaverine urine, Child, Chromatography, Ion Exchange, Female, Humans, Male, Neoplasm Metastasis, Putrescine urine, Sex Factors, Spermidine urine, Spermine urine, Neoplasms urine, Polyamines urine
- Abstract
Levels of putrescrine, spermidine, and spermine in urine were determined by means of a sensitive ion-exchange chromatographic method in patients with advanced solid tumor malignancies, in patients with diseases other than cancer, and in normal control subjects. Elevation above 2 SDS of the normal mean were found in varying number of patients in each tumor category. For those malignancies studied that involved more than 20 patients, the greatest incidences of increased excretion were 66% for spermine in patients with colon carcinoma and 50% for putrescine and spermidine in patients with bronchogenic carcinoma. The highest levels and greatest frequency of elevated polyamine levels were found in patients with Burkitt's lymphoma, and changes in clinical tumor status associated with treatment appeared to correlate well with polyamine levels in this disease. Abnormal amounts of polyamines were also excreted by some patients with diseases other than cancer, indicating that increased polyamine excretion is not restricted or specific to the neoplastic state. It was also found that the levels of polyamines were apparently not affected by the intake of meat or the diet eaten, and remained in a rather narrow excretion range for any one individual at different time intervals. This study was carried out as part of a program to determine and evaluate biologic materials present in body fluids that may be used to follow and evaluate response or progression of neoplastic disease in patients during treatment regimens. The results suggest that abnormal urinary polyamine levels may be characteristic of neoplastic growth for some patients with malignant disease. Further studies are necessary to determine if these compounds may be helpful in assessing disease status for patients with such solid tumor malignancies as colon and bronchogenic carcinoma although their potential as useful "biologic markers" appears less promising than originally anticipated.
- Published
- 1975
46. tRNA breakdown products as markers for cancer.
- Author
-
Speer J, Gehrke CW, Kuo KC, Waalkes TP, and Borek E
- Subjects
- Aminoisobutyric Acids urine, Creatinine urine, Female, Humans, Male, Neoplasms diagnosis, Neoplasms urine, RNA, Neoplasm urine, RNA, Transfer urine
- Abstract
Seven breakdown products of tRNA were quantitated by high pressure liquid chromatography in urine and were related to the creatinine content. In the urine of 26 of 27 patients with 13 different malignancies, there was an elevation of one or more of these "markers." The levels of excretion vary approximately with the stage of the disease.
- Published
- 1979
- Full Text
- View/download PDF
47. Gas-liquid chromatography of fecal neutral steriods.
- Author
-
Gerhardt KO, Gehrke CW, Rogers IT, Flynn MA, and Hentges DJ
- Subjects
- Cholestanol analysis, Cholestanones analysis, Cholesterol analysis, Colonic Neoplasms, Dietary Proteins metabolism, Humans, Male, Sitosterols analysis, Stigmasterol analysis, Cholestanes analysis, Chromatography, Gas methods, Feces analysis
- Abstract
A method is described for the analysis of fecal neutral steriods with a dual-column gas-liquid chromatography (GLC) system. After saponification of the fecal slurry, the neutral steroids were extracted with hexane. The GLC separation of the compounds and quantitation were achieved by simultaneous injection of the derivatized and derivatized aliquots of the extract onto dual colmuns under identical conditions. The neutral steroids of interest were than identified by matching the retention times with those of known standards, and identification was confirmed by use of an interfaced GLC high-resolution mass spectrometry system. The detection limit was 0.003 mg of steroid/g of fecal slurry. The pricision of the method is illustrated by a relative standard diviation of 2-10% and a recovery of neutral steroids from 73-96%. The method was applied to the determination of fecal neutral steroids in a "High protein diet in colon cancer study". A considerably larger level of coprostanone than of coprostanol was observed. Data on neutral steroids in fecal samples from subjects on different diets are the subject of a separate publication.
- Published
- 1977
- Full Text
- View/download PDF
48. Fatty acid pattern and cholesterol in skeletal muscle of men aged 22 to 73.
- Author
-
Thomas TR, Londeree BR, Gerhardt KO, and Gehrke CW
- Subjects
- Adult, Aged, Biopsy, Needle, Fatty Acids, Unsaturated analysis, Humans, Male, Membrane Lipids analysis, Middle Aged, Aging, Cholesterol analysis, Fatty Acids analysis, Muscles analysis
- Abstract
In order to examine the relationship between fatty acid distribution of skeletal muscle membranes and age, a needle biopsy was performed on the vastus lateralis muscle of 20 healthy, non-obese males, ranging in age from 22 to 73 years. The muscle sample was homogenized, centrifuged at 100,000 x g, and the resulting pellet was saponified and acidified. The fatty acids and cholesterol were removed by a single hexane extraction and analyzed by gas--liquid chromatography with flame ionization detection. All subjects regardless of age had no consistent differences in the fatty acid profiles and cholesterol composition in the tissue. Correlation coefficients indicated no significant relationship between the age of the individual and any of the analyzed lipids. The results of this study indicated that aging may not be reflected by gross changes in the composition of structural lipids in the cell.
- Published
- 1978
- Full Text
- View/download PDF
49. Plasma levels of norepinephrine and epinephrine during malignant hyperthermia in susceptible pigs.
- Author
-
Williams CH, Dozier SE, Buzello W, Gehrke CW, Wong JK, and Gerhardt KO
- Subjects
- Animals, Chromatography, High Pressure Liquid, Disease Susceptibility, Swine, Tachycardia blood, Time Factors, Epinephrine blood, Malignant Hyperthermia blood, Norepinephrine blood
- Abstract
Malignant hyperthermia (MH) is a genetic disease of man, swine, dogs, cats, and horses. The syndrome is normally triggered by inhalational anesthetics or the administration of depolarizing muscle relaxants such as succinylcholine or various environmental stress factors. We have used the MH-susceptible pig as an animal model to study the hormonal changes developing during this highly lethal syndrome. High-performance liquid chromatography with electrochemical detection was used for the quantitation of the plasma levels of norepinephrine and epinephrine during MH. This research presents evidence that the rapid release of massive quantities of norepinephrine (up to 108 ng/ml) into the blood stream occurs simultaneously with the initiation of tachycardia which is the herald signal of the onset of MH. Norepinephrine levels exceed epinephrine by a 4:1 ratio early in the syndrome. Even pigs with MH which do not develop the muscle rigor phase have high levels of circulating norepinephrine. Tachycardia, pulmonary hypertension, increased venous oxygen desaturation, and increasing core temperature develop as the syndrome progresses.
- Published
- 1985
- Full Text
- View/download PDF
50. Heat- and alkali-induced deamination of 5-methylcytosine and cytosine residues in DNA.
- Author
-
Wang RY, Kuo KC, Gehrke CW, Huang LH, and Ehrlich M
- Subjects
- 5-Methylcytosine, Deamination, Mutation, Cytosine analogs & derivatives, Hot Temperature, Hydrogen-Ion Concentration
- Abstract
5-methylcytosine residues in DNA underwent deamination at high temperatures. Furthermore, their rate of deamination at neutral or alkaline pH was greater than that of cytosine residues in DNA. As sources of [14C]-5-methylcytosine-containing DNA, we used bacteriophage XP-12 DNA, in which 5-methylcytosine residues completely replace C residues, and calf thymus DNA experimentally substituted with [14C] 5-methylcytosine residues. Upon incubation at 95 degrees C in a physiological buffer or at 60 degrees C in 1 M NaOH, the respective rates of deamination of 5-methylcytosine residues were about 3- and 1.5-times those on cytosine residues. Under the same conditions, the free 5-methyldeoxycytidine was converted to thymidine more rapidly than deoxycytidine was converted to deoxyuridine. The reactions at physiological pH and elevated temperature suggest that deamination of 5-methylcytosine residues may yield a significant portion of spontaneous mutations in vivo, especially in view of the lack of thymine-specific mismatch repair systems with specificity and efficiency comparable to that of uracil excision repair systems.
- Published
- 1982
- Full Text
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