723 results on '"Gedikbasi A"'
Search Results
2. Oxidative damage and mitochondrial dysfunction in cystathionine beta-synthase deficiency
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Mehmet Cihan Balci, Asuman Gedikbasi, Sukru Anil Dogan, Sevde Kahraman, Suzin Tatoryan, Sebnem Tekin Neijmann, Meryem Karaca, Fatmahan Atalar, and Gulden Gokcay
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Cystathionine beta synthase deficiency ,Fibroblast growth factor 21 ,Growth differentiation factor 15 ,Mitochondria ,Oxidative stress ,Medicine ,Science - Abstract
Abstract Cystathionine beta-synthase deficiency (CBSD) is the most prevalent inherited disorder of homocysteine metabolism in the transsulphuration pathway. Research have suggested oxidative stress and inflammation as candidate pathogenic mechanisms in CBSD. This study aims to evaluate mitochondrial dysfunction and oxidative stress biomarkers in cystathionine beta-synthase deficiency (CBSD) patients, which may aid in understanding the pathogenesis of CBSD and improving treatment. The study group comprised 23 patients with a diagnosis of CBSD and healthy controls. We analysed serum levels of NAD+ and NADH by fluorometric assay, FGF-21 and GDF-15 by ELISA, mitochondrial DAMPs by real time qRT-PCR, total homocysteine levels in plasma by enzymatic test and compared the results in CBSD group with healthy controls. In patient group, a positive correlation was found between the total homocysteine level and both GDF-15 and NAD+/NADH levels. Furthermore, there was a negative correlation between total homocysteine levels and both total NAD++NADH and NADH levels. The alterations in NAD+, FGF-21, GDF-15 levels, and NAD+/NADH ratio in patients suggest that oxidative damage coexists with mitochondrial dysfunction in CBSD. Assessment of oxidative damage and addition of anti-oxidant therapy together with mitochondrial support may have additional benefits in reducing long-term morbidity in CBSD patients.
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- 2024
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3. Oxidative damage and mitochondrial dysfunction in cystathionine beta-synthase deficiency
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Balci, Mehmet Cihan, Gedikbasi, Asuman, Dogan, Sukru Anil, Kahraman, Sevde, Tatoryan, Suzin, Neijmann, Sebnem Tekin, Karaca, Meryem, Atalar, Fatmahan, and Gokcay, Gulden
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- 2024
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4. Urine soluble TLR4 levels may contribute to predict urinary tract infection in children: the UTILISE Study
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Aksu, Bagdagul, Afonso, Alberto Caldas, Akil, Ipek, Alpay, Harika, Atmis, Bahriye, Aydog, Ozlem, Bayazıt, Aysun Karabay, Bayram, Meral Torun, Bilge, Ilmay, Bulut, Ipek Kaplan, Buyukkaragoz, Bahar, Comak, Elif, Demir, Belde Kasap, Dincel, Nida, Donmez, Osman, Durmus, Mehmet Akif, Dursun, Hasan, Dusunsel, Ruhan, Duzova, Ali, Ertan, Pelin, Gedikbasi, Asuman, Goknar, Nilufer, Guven, Sercin, Hacihamdioglu, Duygu, Jankauskiene, Augustina, Kalyoncu, Mukaddes, Kavukcu, Salih, Kenan, Bahriye Uzun, Kucuk, Nuran, Kural, Bahar, Litwin, Mieczysław, Montini, Giovanni, Morello, William, Obrycki, Lukasz, Omer, Beyhan, Oner, Huseyin Adil, Ozdemir, Ebru Misirli, Ozkayin, Nese, Paripovic, Dusan, Pehlivanoglu, Cemile, Saygili, Seha, Schaefer, Franz, Schaefer, Susanne, Sonmez, Ferah, Tabel, Yilmaz, Tas, Nesrin, Tasdemir, Mehmet, Teixeira, Ana, Tekcan, Demet, Topaloglu, Rezan, Tulpar, Sebahat, Turkkan, Ozde Nisa, Uysal, Berfin, Uysalol, Metin, Vitkevic, Renata, Yavuz, Sevgi, Yel, Sibel, Yildirim, Tarik, Yildirim, Zeynep Yuruk, Yildiz, Nurdan, Yuksel, Selcuk, Yurtseven, Eray, and Yilmaz, Alev
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- 2024
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5. Comparison of salpingectomy and tubal detorsion procedures after experimental ischemia-reperfusion injury in a rat fallopian tube model: biochemical and histopathological evaluation
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Koyan Karadeniz, Gizem Nur, Karadeniz, Ozan, Bulutlar, Eralp, Yilmaz, Bugra, Gedikbasi, Asuman, Arslan, Hilal Serap, Cetin, Berna Aslan, and Polat, İbrahim
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- 2024
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6. Accidental inhalation of mercury vapor in a child
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Sevketoglu Esra, Hatipoglu Sami, Gedikbasi Asuman, and Kilic Azer
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Medicine - Published
- 2011
7. Urinary HSP70 improves diagnostic accuracy for urinary tract infection in children: UTILISE study
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Yilmaz, Alev, Afonso, Alberto Caldas, Akil, Ipek, Aksu, Bagdagul, Alpay, Harika, Atmis, Bahriye, Aydog, Ozlem, Bayazıt, Aysun Karabay, Bayram, Meral Torun, Bilge, Ilmay, Bulut, Ipek Kaplan, Buyukkaragoz, Bahar, Comak, Elif, Demir, Belde Kasap, Dincel, Nida, Donmez, Osman, Durmus, Mehmet Akif, Dursun, Hasan, Dusunsel, Ruhan, Duzova, Ali, Ertan, Pelin, Gedikbasi, Asuman, Goknar, Nilufer, Guven, Sercin, Hacihamdioglu, Duygu, Jankauskiene, Augustina, Kalyoncu, Mukaddes, Kavukcu, Salih, Kenan, Bahriye Uzun, Kucuk, Nuran, Kural, Bahar, Litwin, Mieczysław, Montini, Giovanni, Morello, William, Nayir, Ahmet, Obrycki, Lukasz, Omer, Beyhan, Ozdemir, Ebru Misirli, Ozkayin, Nese, Paripovic, Dusan, Pehlivanoglu, Cemile, Saygili, Seha, Schaefer, Susanne, Sonmez, Ferah, Tabel, Yilmaz, Tas, Nesrin, Tasdemir, Mehmet, Teixeira, Ana, Tekcan, Demet, Tulpar, Sebahat, Turkkan, Ozde Nisa, Uysal, Berfin, Uysalol, Metin, Vaiciuniene, Daiva, Yavuz, Sevgi, Yel, Sibel, Yildirim, Tarik, Yildirim, Zeynep Yuruk, Yildiz, Nurdan, Yuksel, Selcuk, Yurtseven, Eray, Schaefer, Franz, and Topaloglu, Rezan
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- 2023
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8. The relationship between urine heat shock protein 70 and congenital anomalies of the kidney and urinary tract: UTILISE study
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Bagdagul Aksu, Alberto Caldas Afonso, Ipek Akil, Harika Alpay, Bahriye Atmis, Ozlem Aydog, Sevcan Bakkaloglu, Aysun Karabay Bayazıt, Meral Torun Bayram, Ilmay Bilge, Ipek Kaplan Bulut, Ayse Pinar Goksu Cetinkaya, Elif Comak, Belde Kasap Demir, Nida Dincel, Osman Donmez, Mehmet Akif Durmus, Hasan Dursun, Ruhan Dusunsel, Ali Duzova, Pelin Ertan, Asuman Gedikbasi, Nilufer Goknar, Sercin Guven, Duygu Hacihamdioglu, Augustina Jankauskiene, Mukaddes Kalyoncu, Salih Kavukcu, Bahriye Uzun Kenan, Nuran Kucuk, Bahar Kural, Mieczysław Litwin, Giovanni Montini, William Morello, Lukasz Obrycki, Beyhan Omer, Ebru Misirli Ozdemir, Nese Ozkayin, Dusan Paripovic, Cemile Pehlivanoglu, Seha Saygili, Franz Schaefer, Susanne Schaefer, Ferah Sonmez, Yilmaz Tabel, Nesrin Tas, Mehmet Tasdemir, Ana Teixeira, Demet Tekcan, Rezan Topaloglu, Sebahat Tulpar, Ozde Nisa Turkkan, Berfin Uysal, Metin Uysalol, Renata Vitkevic, Sevgi Yavuz, Sibel Yel, Tarik Yildirim, Zeynep Yuruk Yildirim, Nurdan Yildiz, Selcuk Yuksel, Eray Yurtseven, and Alev Yilmaz
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children ,congenital anomalies of the kidney and urinary tract ,CAKUT ,heat shock proteins ,Hsp70 ,UTILISE study ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
BackgroundCongenital anomalies of the kidney and urinary tract (CAKUT) are defined as structural malformations of the kidney and/or urinary tract. Heat shock proteins (HSPs) are expressed in the kidney in response to cellular changes, such as thermal, hemodynamic, osmotic, inflammatory, and mechanical stresses. This study aimed to assess uHSP70 levels during acute urinary tract infections (UTI) and non-infection periods in patients with CAKUT, and to evaluate whether uHSP70 is elevated in CAKUT subtypes.MethodsAmong patients with CAKUT, 89 patients with UTI (CAKUT-A), 111 without UTI (CAKUT-B), and 74 healthy children were included in the study. uHSP70 levels were measured using enzyme-linked immunosorbent assay (ELISA).ResultsuHSP70 level was significantly higher in the CAKUT-A group than in the CAKUT-B and healthy control groups (p < 0.0001). Moreover, the level of uHSP70 was significantly higher in the CAKUT-B group than in the control group (p < 0.0001), but was not different between the CAKUT subtypes (p > 0.05).ConclusionUrine HSP70 can also be used to predict UTI in patients with CAKUT. Moreover, uHSP70 levels were higher in children with CAKUT during the non-infectious period than in healthy controls. This suggests that children with CAKUT are at risk of chronic non-infectious damage.
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- 2024
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9. Mutation identification and prediction for severe cardiomyopathy in Alström syndrome, and review of the literature for cardiomyopathy
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Savas Dedeoglu, Elif Dede, Funda Oztunc, Asuman Gedikbasi, Gozde Yesil, and Reyhan Dedeoglu
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Alström syndrome ,Severe cardiomyopathy ,Genetic mutation ,Medicine - Abstract
Abstract Objective Alström syndrome (ALMS) is a rare autosomal recessive genetic disorder that is caused by homozygous or compound heterozygous mutation in the ALMS1 gene. Dilated cardiomyopathy (DCM) is one of the well-recognized features of the syndrome ranging from sudden-onset infantile DCM to adult-onset cardiomyopathy, sometimes of the restrictive hypertrophic form with a poor prognosis. We aimed to evaluate severe cardiomyopathy in Alström syndrome in infancy and display susceptible specific mutations of the disease, which may be linked to severe DCM. Secondarily we reviewed published mutations in ALMS1 with cardiomyopathies in the literature. Method We represent new mutagenic alleles related to severe cardiomyopathy and cardiac outcome in this patient cohort. We evaluated echocardiographic studies of nine Turkish patients diagnosed with Alström syndrome (between 2014 and 2020, at age two weeks to twenty years). Thus, we examined the cardiac manifestations of a single-centre prospective series of nine children with specific ALMS mutations and multisystem involvement. All patients underwent genetic and biochemical testing, electrocardiograms, and echocardiographic imaging to evaluate systolic strain with speckle tracking. Results Four of the patients died from cardiomyopathy. Three patients (including three of the four fatalities) with the same mutation (c.7911dupC [p.Asn2638Glnfs*24]) had cardiomyopathy with intra-familial variability in the severity of cardiomyopathy. Global longitudinal strain, a measure of systolic contractile function, was abnormal in all patients that can be measured. Conclusion Cardiac function in ALMS patients with infantile cardiomyopathy appears to have different clinical spectrums depending on the mutagenic allele. The c.7911dupC (p. Asn2638Glnfs*24) mutation can be related to severe cardiomyopathy. Parents can be informed and consulted about the progression of severe cardiomyopathy in a child carrying this mutagenic allele.
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- 2022
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10. PROGRESS STUDY : Progression of chronic kidney disease in children and heat shock proteins
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Yildirim, Zeynep Nagehan Yuruk, Akgul, Sebahat Usta, Alpay, Harika, Aksu, Bagdagul, Oguz, Fatma Savran, Kiyak, Aysel, Akinci, Nurver, Yavuz, Sevgi, Ozcelik, Gul, Gedikbasi, Asuman, Gokce, Ibrahim, Ozkayin, Nese, Yildiz, Nurdan, Pehlivanoglu, Cemile, Goknar, Nilufer, Saygili, Seha, Tulpar, Sebahat, Kucuk, Nuran, Bilge, Ilmay, Tasdemir, Mehmet, Agbas, Ayse, Dirican, Ahmet, Emre, Sevinc, Nayir, Ahmet, and Yilmaz, Alev
- Published
- 2021
11. Clinical and bi-genomic DNA findings of patients suspected to have mitochondrial diseases
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Asuman Gedikbasi, Guven Toksoy, Meryem Karaca, Cagri Gulec, Mehmet Cihan Balci, Dilek Gunes, Seda Gunes, Ayca Dilruba Aslanger, Gokcen Unverengil, Birsen Karaman, Seher Basaran, Mubeccel Demirkol, Gulden Fatma Gokcay, and Zehra Oya Uyguner
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mitochondrial diseases ,mtDNA ,bi-genomic sequencing ,exome sequencing ,differential diagnosis ,Genetics ,QH426-470 - Abstract
Background: Mitochondrial diseases are the most common group of inherited metabolic disorders, causing difficulties in definite diagnosis due to clinical and genetic heterogeneity. Clinical components are predominantly associated with pathogenic variants shown in nuclear or mitochondrial genomes that affect vital respiratory chain function. The development of high-throughput sequencing technologies has accelerated the elucidation of the genetic etiology of many genetic diseases that previously remained undiagnosed.Methods: Thirty affected patients from 24 unrelated families with clinical, radiological, biochemical, and histopathological evaluations considered for mitochondrial diseases were investigated. DNA isolated from the peripheral blood samples of probands was sequenced for nuclear exome and mitochondrial DNA (mtDNA) analyses. MtDNA sequencing was also performed from the muscle biopsy material in one patient. For segregation, Sanger sequencing is performed for pathogenic alterations in five other affected family members and healthy parents.Results: Exome sequencing revealed 14 different pathogenic variants in nine genes encoding mitochondrial function peptides (AARS2, EARS2, ECHS1, FBXL4, MICOS13, NDUFAF6, OXCT1, POLG, and TK2) in 12 patients from nine families and four variants in genes encoding important for muscle structure (CAPN3, DYSF, and TCAP) in six patients from four families. Three probands carried pathogenic mtDNA variations in two genes (MT-ATP6 and MT-TL1). Nine variants in five genes are reported for the first time with disease association: (AARS2: c.277C>T/p.(R93*), c.845C>G/p.(S282C); EARS2: c.319C>T/p.(R107C), c.1283delC/p.(P428Lfs*); ECHS1: c.161G>A/p.(R54His); c.202G>A/p.(E68Lys); NDUFAF6: c.479delA/p.(N162Ifs*27); and OXCT1: c.1370C>T/p.(T457I), c.1173-139G>T/p.(?).Conclusion: Bi-genomic DNA sequencing clarified genetic etiology in 67% (16/24) of the families. Diagnostic utility by mtDNA sequencing in 13% (3/24) and exome sequencing in 54% (13/24) of the families prioritized searching for nuclear genome pathologies for the first-tier test. Weakness and muscle wasting observed in 17% (4/24) of the families underlined that limb-girdle muscular dystrophy, similar to mitochondrial myopathy, is an essential point for differential diagnosis. The correct diagnosis is crucial for comprehensive genetic counseling of families. Also, it contributes to making treatment-helpful referrals, such as ensuring early access to medication for patients with mutations in the TK2 gene.
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- 2023
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12. Mutation identification and prediction for severe cardiomyopathy in Alström syndrome, and review of the literature for cardiomyopathy
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Dedeoglu, Savas, Dede, Elif, Oztunc, Funda, Gedikbasi, Asuman, Yesil, Gozde, and Dedeoglu, Reyhan
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- 2022
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13. The Relationship between Nifedipine and Postpartum Blood Loss in Patients with Preterm Labor
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Huseyin Kiyak, Nazli Korkmaz, Sema Suzen Caypinar, Zuat Acar, Alev Atis Aydin, Batuhan Ustun, Zubeyde Aytufan, and Ali Gedikbasi
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nifedipine ,postpartum hemorrhage ,preterm labor ,calcium channel blockers ,Gynecology and obstetrics ,RG1-991 - Abstract
Background: The purpose of the study, to determine whether exposure to nifedipine before delivery is associated with an increased risk of postpartum blood loss in patients with preterm labor. Methods: This was a retrospective study screening a total of 486 patients who were admitted due to preterm labor from 2012 to 2019. Patients who were given nifedipine for tocolysis before delivery were considered as the study group (n: 240), and the patients who gave birth without getting tocolysis were considered as the control group (n: 246). The dose of nifedipine used during the last 24 hours, 72 hours and 1 week before delivery, the total dose of nifedipine given and the duration from the last dose to the delivery were recorded separately. Hemoglobin and hematocrit and platelet values measured before and 6 hours after delivery were recorded and postpartum bleeding amount was calculated. Results: No significant difference is observed in terms of mean difference between pre/postpartum hemoglobin and hematocrit levels between control group and nifedipine group (p > 0.05). But when subgroups that are created according to the time of use of nifedipine before delivery, a positive correlation was observed between difference in hemoglobin and hematocrit levels between prepartum and postpartum and nifedipine dosage for the last 24 hours (r = 0.176, p = 0.006), (r = 0.139, p = 0.030), but not for 72 hours or one week. Conclusions: The use of nifedipine in patients with preterm labor for tocolysis may be associated with increase in postpartum blood loss in the last 24 hours before delivery.
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- 2023
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14. Role of soluble triggering receptor expressed in myeloid cells-1 in distinguishing SIRS, sepsis, and septic shock in the pediatric intensive care unit
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Duramaz, Burcu Bursal, Ankay, Nermin, Yesilbas, Osman, Kihtir, Hasan Serdar, Yozgat, Can Yilmaz, Petmezci, Mey Talip, Gedikbasi, Asuman, and Sevketoglu, Esra
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- 2021
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15. PROGRESS STUDY: Progression of chronic kidney disease in children and heat shock proteins
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Yuruk Yildirim, Zeynep Nagehan, Usta Akgul, Sebahat, Alpay, Harika, Aksu, Bagdagul, Savran Oguz, Fatma, Kiyak, Aysel, Akinci, Nurver, Yavuz, Sevgi, Ozcelik, Gul, Gedikbasi, Asuman, Gokce, Ibrahim, Ozkayin, Nese, Yildiz, Nurdan, Pehlivanoglu, Cemile, Goknar, Nilufer, Saygili, Seha, Tulpar, Sebahat, Kucuk, Nuran, Bilge, Ilmay, Tasdemir, Mehmet, Agbas, Ayse, Dirican, Ahmet, Emre, Sevinc, Nayir, Ahmet, and Yilmaz, Alev
- Published
- 2021
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16. The relationship between urine heat shock protein 70 and congenital anomalies of the kidney and urinary tract: UTILISE study
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Aksu, Bagdagul, primary, Afonso, Alberto Caldas, additional, Akil, Ipek, additional, Alpay, Harika, additional, Atmis, Bahriye, additional, Aydog, Ozlem, additional, Bakkaloglu, Sevcan, additional, Bayazıt, Aysun Karabay, additional, Bayram, Meral Torun, additional, Bilge, Ilmay, additional, Bulut, Ipek Kaplan, additional, Cetinkaya, Ayse Pinar Goksu, additional, Comak, Elif, additional, Demir, Belde Kasap, additional, Dincel, Nida, additional, Donmez, Osman, additional, Durmus, Mehmet Akif, additional, Dursun, Hasan, additional, Dusunsel, Ruhan, additional, Duzova, Ali, additional, Ertan, Pelin, additional, Gedikbasi, Asuman, additional, Goknar, Nilufer, additional, Guven, Sercin, additional, Hacihamdioglu, Duygu, additional, Jankauskiene, Augustina, additional, Kalyoncu, Mukaddes, additional, Kavukcu, Salih, additional, Kenan, Bahriye Uzun, additional, Kucuk, Nuran, additional, Kural, Bahar, additional, Litwin, Mieczysław, additional, Montini, Giovanni, additional, Morello, William, additional, Obrycki, Lukasz, additional, Omer, Beyhan, additional, Misirli Ozdemir, Ebru, additional, Ozkayin, Nese, additional, Paripovic, Dusan, additional, Pehlivanoglu, Cemile, additional, Saygili, Seha, additional, Schaefer, Franz, additional, Schaefer, Susanne, additional, Sonmez, Ferah, additional, Tabel, Yilmaz, additional, Tas, Nesrin, additional, Tasdemir, Mehmet, additional, Teixeira, Ana, additional, Tekcan, Demet, additional, Topaloglu, Rezan, additional, Tulpar, Sebahat, additional, Turkkan, Ozde Nisa, additional, Uysal, Berfin, additional, Uysalol, Metin, additional, Vitkevic, Renata, additional, Yavuz, Sevgi, additional, Yel, Sibel, additional, Yildirim, Tarik, additional, Yildirim, Zeynep Yuruk, additional, Yildiz, Nurdan, additional, Yuksel, Selcuk, additional, Yurtseven, Eray, additional, and Yilmaz, Alev, additional
- Published
- 2024
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17. Serum prolidase activity in patients with cardiac syndrome X
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Gonul Aciksari, Bulent Demir, Turgut Uygun, Asuman Gedikbasi, Orkide Kutlu, Adem Atici, Omer Faruk Baycan, Mehmet Kocak, and Şeref Kul
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cardiac syndrome x ,collagen ,serum prolidase activity. ,Medicine ,Medicine (General) ,R5-920 - Abstract
OBJECTIVE: Although the underlying mechanism is not yet fully understood, Cardiac Syndrome X (CSX) is defined as microvascular dysfunction. Prolidase plays a role in collagen synthesis. Increased serum prolidase activity (SPA) has been shown to correlate with collagen turnover. Augmented collagen turn-over may be associated with vascular fibrosis and microvascular dysfunction. In this study, we assessed whether there was a correlation between CXS and prolidase activity. METHODS: This case-control study included 45 consecutive CSX patients (mean age 50.7+-6.5 years, 27 women) and 40 healthy controls (mean age 51.2+-6.5 years, 25 women). Prolidase activity was determined with the Human Xaa-Pro Dipeptidase/Prolidase enzyme-linked immunosorbent assay kit (Cusabio Biotech Co. Ltd, China). RESULTS: Mean prolidase activity was 898.8+-639.1 mU/mL in the CSX group and 434.1+-289.8 mU/mL in the control group (p
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- 2020
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18. Management of ovulation induction and intrauterine insemination in infertile patients with hypogonadotropic hypogonadism
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Huseyin, Kiyak, Berk, Bulut, Tolga, Karacan, Eser, Ozyurek, Ali, Gedikbasi, and Murat, Api
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- 2019
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19. Assessment of utero‐cervical angle and cervical length as predictors for threatened preterm delivery in singleton pregnancies
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Korkmaz, Nazli, primary, Kiyak, Huseyin, additional, Bolluk, Gokhan, additional, Bafali, Olgu, additional, Ince, Osman, additional, and Gedikbasi, Ali, additional
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- 2023
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20. The Relationship between Nifedipine and Postpartum Blood Loss in Patients with Preterm Labor
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Kiyak, Huseyin, primary, Korkmaz, Nazli, primary, Caypinar, Sema Suzen, primary, Acar, Zuat, primary, Aydin, Alev Atis, primary, Ustun, Batuhan, primary, Aytufan, Zubeyde, primary, and Gedikbasi, Ali, primary
- Published
- 2023
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21. Successful prenatal treatment with continuous chronic maternal hyperoxygenation therapy in hypoplastic left heart in two pregnancies: Case report
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Bolluk, Gokhan, primary, Oztarhan, Aylin, additional, Vural, Cagdas, additional, Oztarhan, Kazim, additional, and Gedikbasi, Ali, additional
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- 2023
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22. Urinary neutrophil gelatinase-associated lipocalin is associated with preeclampsia in a cohort of Turkish women
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Semra Yuksel, Sefik Eser Ozyurek, Deniz Kanber Acar, Cagdas Ozdemir, Sebile Guler, Huseyin Kiyak, and Ali Gedikbasi
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preeclampsia ,neutrophil gelatinase associated lipocalin ,severe preeclampsia ,preeclampsia diagnosis ,Gynecology and obstetrics ,RG1-991 - Abstract
Purpose: We investigated the optimal cut-off level for urinary neutrophil gelatinase-associated lipocalin (NGAL) in preeclamptic patients to confirm the diagnosis. Methods: Urinary NGAL concentrations were measured by specific enzyme-linked immunosorbent assay (ELISA). Results: Patients with preeclampsia had significantly higher urinary NGAL concentrations than controls (mean: 387 ng/ml vs. 188 ng/ml, respectively; P< 0.001). Using a cutoff value 252 ng/ml for urinary NGAL to confirm diagnosis of preeclampsia, sensitivity, and specificity were 92% and 91%, respectively. Conclusion: Urinary NGAL concentrations were significantly elevated in women with preeclampsia versus normotensive controls.
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- 2019
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23. Surgical Site Infections in a Tertiary Referral Obstetric and Gynecologic Clinic Center in Istanbul and Review of the Literature
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Hale Goksever Celik, Engin Celik, Selin Dikmen, Merve Konal, and Ali Gedikbasi
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Surgical site infections, Cesarean delivery, Hysterectomy, Vaginal birth ,Gynecology and obstetrics ,RG1-991 - Abstract
Objective: The present study aimed to define characteristics of the patients who were readmitted with the diagnosis of surgical site infections after gynecologic or obstetric procedures and management of these patients. We also reviewed the literature in this context. Study design: We examined 120 patients with surgical site infections that had been hospitalized and managed medically and/or surgically between April 2014 and April 2015. Characteristics of the patients were recorded and analyzed. Results: The mean age of the patients was 33.4±11.8 years. The patients were readmitted for surgical site infections on the mean of 9.6±5.4 days after the first operation. The most frequent procedures resulted with SSI were cesarean delivery, abdominal hysterectomy and vaginal birth. When patients were compared according to these procedures, there were statistically significant differences regarding age, gravida, parity, preoperative white blood cell count, postoperative white blood cell count and antibiotics usage. Conclusion: Combining evidence-based surgical site infections prevention practices and clinician and patient cooperation will result in reduction in surgical site infections incidence following obstetric and gynecologic procedures. Because of economic burden and threat to the physical and psychological health of the patients, these modifiable risks should be recognized and surgical site infections should be minimized. After surgical site infections occurred, diagnosis and proper management with antibiotics and wound care with debridement and secondary suturing is important.
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- 2018
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24. Urine soluble TLR4 levels may contribute to predict urinary tract infection in children: the UTILISE Study
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Aksu, Bagdagul, primary, Afonso, Alberto Caldas, additional, Akil, Ipek, additional, Alpay, Harika, additional, Atmis, Bahriye, additional, Aydog, Ozlem, additional, Bayazıt, Aysun Karabay, additional, Bayram, Meral Torun, additional, Bilge, Ilmay, additional, Bulut, Ipek Kaplan, additional, Buyukkaragoz, Bahar, additional, Comak, Elif, additional, Demir, Belde Kasap, additional, Dincel, Nida, additional, Donmez, Osman, additional, Durmus, Mehmet Akif, additional, Dursun, Hasan, additional, Dusunsel, Ruhan, additional, Duzova, Ali, additional, Ertan, Pelin, additional, Gedikbasi, Asuman, additional, Goknar, Nilufer, additional, Guven, Sercin, additional, Hacihamdioglu, Duygu, additional, Jankauskiene, Augustina, additional, Kalyoncu, Mukaddes, additional, Kavukcu, Salih, additional, Kenan, Bahriye Uzun, additional, Kucuk, Nuran, additional, Kural, Bahar, additional, Litwin, Mieczysław, additional, Montini, Giovanni, additional, Morello, William, additional, Obrycki, Lukasz, additional, Omer, Beyhan, additional, Oner, Huseyin Adil, additional, Ozdemir, Ebru Misirli, additional, Ozkayin, Nese, additional, Paripovic, Dusan, additional, Pehlivanoglu, Cemile, additional, Saygili, Seha, additional, Schaefer, Franz, additional, Schaefer, Susanne, additional, Sonmez, Ferah, additional, Tabel, Yilmaz, additional, Tas, Nesrin, additional, Tasdemir, Mehmet, additional, Teixeira, Ana, additional, Tekcan, Demet, additional, Topaloglu, Rezan, additional, Tulpar, Sebahat, additional, Turkkan, Ozde Nisa, additional, Uysal, Berfin, additional, Uysalol, Metin, additional, Vitkevic, Renata, additional, Yavuz, Sevgi, additional, Yel, Sibel, additional, Yildirim, Tarik, additional, Yildirim, Zeynep Yuruk, additional, Yildiz, Nurdan, additional, Yuksel, Selcuk, additional, Yurtseven, Eray, additional, and Yilmaz, Alev, additional
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- 2023
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25. Assessment of utero‐cervical angle and cervical length as predictors for threatened preterm delivery in singleton pregnancies.
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Korkmaz, Nazli, Kiyak, Huseyin, Bolluk, Gokhan, Bafali, Olgu, Ince, Osman, and Gedikbasi, Ali
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CERVIX uteri physiology ,RESEARCH ,MATERNAL health services ,ATTITUDES of mothers ,ULTRASONIC imaging ,MULTIVARIATE analysis ,GESTATIONAL age ,PREGNANCY outcomes ,DESCRIPTIVE statistics ,PARITY (Obstetrics) ,DELIVERY (Obstetrics) ,PREDICTION models ,STATISTICAL correlation ,LOGISTIC regression analysis ,PREMATURE labor ,LONGITUDINAL method ,SECONDARY analysis ,EVALUATION - Abstract
Objectives: The aim of this study was to evaluate the relationship between the cervix and the threat of preterm labor in singleton pregnancies between gestational weeks less than 37 and greater than 37 weeks in correlation with utero‐cervical angle (UCA) and cervical length (CL) measurements. Materials and Methods: We conducted a prospective cohort study with UCA and CL measurements in patients with threatened preterm labor (TPL). Primary outcome was differences in UCA and CL measurements in relationship to maternal characteristics and perinatal outcome between groups. Secondary outcome evaluated measurement results and influencing factors for delivery within 7 days, between 1 and 4 weeks and beyond 4 weeks. Results: Overall 152 patients were divided into as study/preterm group (<37 weeks; n = 56) and the control/term group (≥37 weeks; n = 96). Mean gestational age at admission was similar in both groups (30.98 ± 2.83 vs. 30.36 ± 2.63 weeks, p = 0.149) with similar CL (33.9 ± 6.34 vs. 32.02 ± 8.88 mm, p = 0.132), but wider UCA in the preterm group (81.65 ± 16.81° vs. 99.21 ± 22.33°, p < 0.001). Multivariate logistic regression analysis for preterm delivery was significant for nulliparity and UCA measurement. The factor for delivering before 37 gestational weeks within 7 days was the gestational week at admission (p = 0.046). UCA and CL measurements were statistically significant for distinguishing patients for delivery within 7 days and beyond 4 weeks (p = 0.001 for CL and p = 0.0001 for UCA). NPV was found 92.5, 92.2, and 92.3 for UCA >105°, CL ≤30 mm, and Bishop score >3, respectively. Conclusion: Combined measurement of TV UCA and CL represents stronger predictors for sPTB ultrasonographically, demonstrating the uterocervical sub‐segment maturation before the active onset of labor. [ABSTRACT FROM AUTHOR]
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- 2024
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26. The Importance of Decreased Expression Levels of BAT5 and IL21R-AS1 in Circulating Leukocytes of Patients with Acute Myocardial Infarction
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Senturk, Hilal, primary, Karaayvaz, Ekrem Bilal, additional, Oksen, Dogac, additional, Yildiz, Mustafa, additional, Yildiz, Cenk Eray, additional, Gedikbasi, Asuman, additional, and Komurcu-Bayrak, Evrim, additional
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- 2023
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27. The utility of first trimester uterine artery Doppler, placental volume and PAPP-A levels alone and in combination to predict preeclampsia
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Yücel, Burak, Gedikbasi, Ali, Dündar, Oznur, Olgac, Yusuf, Yıldırım, Dogukan, Yıldırım, Gokhan, and Polat, Ibrahim
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- 2016
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28. The Importance of Decreased Expression Levels of BAT5 and IL21R-AS1 in Circulating Leukocytes of Patients with Acute Myocardial Infarction
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Hilal Senturk, Ekrem Bilal Karaayvaz, Dogac Oksen, Mustafa Yildiz, Cenk Eray Yildiz, Asuman Gedikbasi, and Evrim Komurcu-Bayrak
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Background: Long non-coding RNAs (lncRNAs) play important roles in cellular processes and disease pathogenesis. In this study, we aimed to show the relationships and possible effects of the expression level of two lncRNAs in acute myocardial infarction (AMI) in circulating leukocytes. Methods and Results: In this case-control study, the relationship between AMI and expression levels of two candidate lncRNAs, called BAT5 (HLA-B-Associated Transcript 5) and IL21R-AS1 (IL21R antisense RNA 1), in 231 patients who underwent percutaneous coronary interventions were investigated. Expression levels of lncRNAs in leukocytes were measured by quantitative real-time PCR (qRT-PCR). The m6A modification regions and subcellular localizations of these lncRNAs were predicted by in silico analysis. Routine biochemical and immunoassay analyzes were performed on Roche Cobas 8000/e701 integrated automated analyzer with their original kits. Ranked ANCOVA tests were used to compare expression levels of lncRNAs between groups after adjusting for gender and use of cardiovascular drugs. The crude and adjusted expression levels of BAT5 and IL21R-AS1 in leukocytes of AMI patients (n=128) were found to decrease compared to the control cases (n=103) (p6A modification regions of BAT5 and IL21R-AS1 transcripts was determined as 5 and 4, respectively. Conclusion: This study indicates that the decreased expression levels of BAT5 and IL21R-AS1 are associated with the occurrence of acute myocardial infarction in individuals.
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- 2023
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29. The correlation between bone biomarkers, glucosylsphingosine levels, and molecular findings in Gaucher type 1 patients under enzyme therapy
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Melike Ersoy, Duygu Yegül, Hamide Pişkinpaşa, and Asuman Gedikbasi
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Biochemistry (medical) ,Clinical Biochemistry ,Molecular Biology ,Biochemistry - Abstract
Objectives We aimed to determine the relationship of Lyso-Gb1 levels, bone biomarkers, and mutation findings with bone marrow burden (BMB) scores. Methods Lyso-Gb1 and bone biomarkers, and BMB scores of 10 Gaucher type 1 (GD1) patients under enzyme therapy were prospectively evaluated. Results Ten GD1 patients, aged between 4.5 and 40 (mean 23 ± 11 years), were included in the study. Four patients were homozygous for L444P/L444P, and six patients were compound heterozygous for N370S/R415H. We found positive correlations between pain and BMB scores with Lyso-Gb1 levels (r=0.889, p=0.001 and r=0.701, p=0.035, respectively). There were negative correlations between bone mineral density (BMD) of both the lumbar spine and femoral neck between Lyso-Gb1 levels (r=−0.929, p=0.001 and r=−0.893, p=0.007, respectively). Patients with L444P/L444P mutation had higher Lyso-Gb1 levels and BMB, pain scores and lower BMD measurements than patients with N370S/R415H (p=0.01, p=0.02, p=0.03, p=0.04, p=0.04, respectively). Conclusions There was an apparent correlation between, Lyso-Gb1 levels, BMB scores and genotype in evaluating bone involvement in Gaucher patients.
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- 2022
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30. Diagnostic importance of S100A9 and S100A12 in breast cancer
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Gunaldi, Meral, Okuturlar, Yildiz, Gedikbasi, Asuman, Akarsu, Cevher, Karabulut, Mehmet, and Kural, Alev
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- 2015
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31. DNA damage effects of inhalation anesthetics in human bronchoalveolar cells
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Cukurova, Zafer, Cetingok, Halil, Ozturk, Sukru, Gedikbasi, Asuman, Hergunsel, Oya, Ozturk, Derya, Don, Burak, Cefle, Kivanc, Palanduz, Sukru, and Ertem, Devrimsel Harika
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- 2019
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32. Role of soluble triggering receptor expressed in myeloid cells-1 in distinguishing SIRS, sepsis, and septic shock in the pediatric intensive care unit
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Osman Yeşilbaş, Nermin Ankay, Burcu Bursal Duramaz, Hasan Serdar Kıhtır, Mey Talip Petmezci, Can Yilmaz Yozgat, Esra Şevketoğlu, and Asuman Gedikbasi
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Male ,medicine.medical_specialty ,Myeloid ,Adolescent ,Intensive Care Units, Pediatric ,Gastroenterology ,Statistics, Nonparametric ,Procalcitonin ,Diagnosis, Differential ,Sepsis ,Internal medicine ,White blood cell ,medicine ,Humans ,Prospective Studies ,Child ,Pediatric intensive care unit ,Chi-Square Distribution ,Septic shock ,business.industry ,Organ dysfunction ,Infant, Newborn ,Infant ,medicine.disease ,Systemic Inflammatory Response Syndrome ,Triggering Receptor Expressed on Myeloid Cells-1 ,Systemic inflammatory response syndrome ,medicine.anatomical_structure ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Female ,Duramaz B. B. , Ankay N., YEŞİLBAŞ O., Kihtir H. S. , Yozgat C. Y. , Petmezci M. T. , Gedikbasi A., Sevketoglu E., -Role of soluble triggering receptor expressed in myeloid cells-1 in distinguishing SIRS, sepsis, and septic shock in the pediatric intensive care unit-, ARCHIVES DE PEDIATRIE, cilt.28, sa.7, ss.567-572, 2021 ,medicine.symptom ,business - Abstract
Background Research into new markers has been intensified for early diagnosis, prognosis, and differentiation of SIRS, sepsis, and septic shock in recent years. This study aimed to investigate the role of soluble triggering receptor expressed in myeloid cells-1 (sTREM-1) and interleukin (IL)-6 in distinguishing between systemic inflammatory response syndrome (SIRS), sepsis, and septic shock in pediatric intensive care unit (PICU) patients. Methods Between June 2014 and July 2015, 90 consecutive patients who were treated in the PICU were included in this prospective observational study. Patients were divided into four groups: control (n = 23), SIRS (n = 22), sepsis (n = 23), and septic shock (n = 22). All patients were evaluated for white blood cell (WBC), serum C-reactive protein (CRP), procalcitonin (PCT), IL-6, and sTREM-1 levels at 0, 24, and 72 h of admission. The prognostic evaluations were made using the Pediatric Risk of Mortality III (PRISM III) and Pediatric Logistic Organ Dysfunction (PELOD) scores. Patients were evaluated in terms of age, gender, prognosis, pathogen growth in culture, PRISM III and PELOD score, WBC, CRP, PCT, IL-6, and sTREM-1 levels and a comparison was made between groups. Results There was no significant difference between all groups in terms of the 0-, 24-, and 72-h sTREM-1 values (p = 0.761, p = 0.360, and p = 0.822, respectively). CRP and PCT values did not differ between the septic shock, sepsis, and SIRS groups at 0, 24, and 72 h. In the septic shock group, the 0-h IL-6 value was significantly higher than that of the SIRS group (p = 0.025). The 24-h IL-6 value in the septic shock group was significantly higher than the values of the sepsis and SIRS groups (p = 0.048 and p = 0.043, respectively). No significant difference was detected between the septic shock, sepsis, and SIRS groups in terms of IL-6 values at 72 h. Conclusion sTREM-1 is not useful for the diagnosis of infection and for distinguishing between sepsis, septic shock, and SIRS since it does not offer a clear diagnostic value for PICU patients, unlike other reliable markers such as WBC, CRP, and PCT. Elevated IL-6 levels may indicate septic shock in PICU patients. More research on sTREM-1 is needed in this setting.
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- 2021
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33. The Effects of Resistance and Aerobic Exercises on Adiponectin, Insulin Resistance, Lipid Profile and Body Composition in Adolescent Boys with Obesity
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Ferit Kerim Kucukler, Ani Agopyan, Meral Küçük Yetgin, Nurper Özbar, Bilal Biçer, Hasan Birol Cotuk, Fatma Celik Kayapinar, Soner Yetgin, Asuman Gedikbasi, [Belirlenecek], Yetgin, Meral Kcuuk, Agopyan, Ani, Kucukler, Ferit Kerim, Gedikbasi, Asuman, Yetgin, Soner, Kayapinar, Fatma Celik, Ozbar, Nurper, Bicer, Bilal, and Cotuk, Hasan Birol
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medicine.medical_specialty ,insulin ,obesity ,lcsh:Medicine ,CHILDREN ,INFLAMMATORY MARKERS ,Insulin resistance ,LEPTIN ,Internal medicine ,medicine ,Aerobic exercise ,METAANALYSIS ,OUTCOMES ,OVERWEIGHT ,Adiponectin ,medicine.diagnostic_test ,adiponectin ,exercise ,business.industry ,lcsh:R ,[No Keywords] ,medicine.disease ,Obesity ,lipid profile ,Endocrinology ,PHYSICAL-ACTIVITY ,FAT ,Composition (visual arts) ,ADIPOSITY ,SENSITIVITY ,business ,Lipid profile - Abstract
Introduction: This present study aimed to examine the effectsof long-term resistance exercise (REG) and aerobic exercise(AEG) on the adiponectin, insulin resistance, lipid profile andbody composition in adolescent boys with obesity.Methods: Sixteen obese adolescent boys (age: 16.81±0.91 years)who studied at high school in İstanbul voluntarily participatedin the study. The participants were randomly divided into twogroups of (REG; n=8) and (AEG; n=8). The participants followedtheir exercise schedule for six months (3 days/wk, 60 min/day).The serum lipid profile, adiponectin, glucose, insulin resistance(HOMA-IR) levels and body composition of the participantswere evaluated at the beginning and end of the study. AWilcoxon matched-pairs signed-rank test and Mann-WhitneyU test were used for analyses, and the criterion for statisticalsignificance was set at p
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- 2020
34. Predicting previable preterm premature rupture of membranes (pPPROM) before 24 weeks: maternal and fetal/neonatal risk factors for survival
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Rabia Merve Erbiyik, Ali Gedikbasi, Huseyin Kiyak, Semra Yüksel, Gökhan Bolluk, and Aylin Günes
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Fetal Membranes, Premature Rupture ,medicine.medical_specialty ,Placenta ,Resuscitation ,Gestational Age ,Chorioamnionitis ,Pregnancy ,Risk Factors ,medicine ,Birth Weight ,Humans ,Prospective Studies ,Child ,Retrospective Studies ,Respiratory Distress Syndrome, Newborn ,Placental abruption ,business.industry ,Obstetrics ,Infant, Newborn ,Pregnancy Outcome ,Obstetrics and Gynecology ,Gestational age ,Retinopathy of prematurity ,Amniotic Fluid ,medicine.disease ,Female ,business ,Premature rupture of membranes ,Postpartum period ,Neonatal resuscitation - Abstract
We sought to compare maternal and neonatal risk factors in cases with previable premature rupture of membranes (pPPROM, between 14-24 weeks) for optimal counselling. Therefore, 192 pregnancies of 485 cases which met selection criteria and agreed to follow-up were retrospectively analysed. Mean gestational age at pPPROM was 20.45 weeks. Live births occurred in 171 cases, but 67 (39.2%) of them died in the neonatal period (neonatal death group) and 104 cases (60.8%) constituted surviving neonate group. Of the surviving neonates, 37 (33.7%) experienced at least one complication. Most seen maternal complications were chorioamnionitis (24.48%) and placental abruption (8.33%). Although amniotic fluid volume, length of pPPROM period, completing antibiotherapy and CRP values were significant, amniotic fluid volume and length of pPPROM showed also significance for multivariate regression analysis for maternal risk factors. Risk factors for birth were gestational age at pPPROM, gestational age at birth, new-born weight at birth, 1st and 5th minute Apgar scores, umbilical cord pH value and need for neonatal resuscitation. Furthermore, development of respiratory distress syndrome, necrotising enterocolitis, intraventricular haemorrhage and retinopathy of premature were additional risk factors for neonate. Of them, gestational age at birth, new-born weight at birth, respiratory distress syndrome and retinopathy of prematurity were also significant in multivariate regression analysis.Impact StatementWhat is already known on this subject? Management of previable premature rupture of membranes is controversial and there is no definite consensus on the approach. The factor that best predicts neonatal survival is the gestational age at birth (Deutsch et al. 2010).What do the results of this study add? Appropriate counselling for pPPROM cases is important especially during antenatal period (maternal factors) and postpartum period (neonatal factors). Maternal infection risk is increased with an increased latency period of PPROM. As the gestational age at birth increases, the survival rate increases and neonatal complication rates decrease. Other important determinants of neonatal survival and well-being are the presence of oligo-anhydramnios and latency period of previable PPROM to delivery.What are the implications of these findings for clinical practice and/or further research? Counselling the patient with previable PPROM about pregnancy complications and paediatric outcome is challenging because of the small size, different gestational age ranges, and retrospective nature of the multiple studies on this subject. The most important feature of our study was the relatively high number of patients compared to other series. Thus, we can counsel pregnant women with PPROM prior to 24 weeks of gestation about the maternal antenatal factors and neonatal postnatal factors with related outcomes and help make an informed decision regarding termination or conservative follow-up. Nevertheless, there is a need for larger multicentric prospective studies to validate our data and to establish the prognosis of previable PPROM for both mother and foetus.
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- 2021
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35. Clinical and bi-genomic DNA findings of patients suspected to have mitochondrial diseases.
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Gedikbasi, Asuman, Toksoy, Guven, Karaca, Meryem, Gulec, Cagri, Balci, Mehmet Cihan, Gunes, Dilek, Gunes, Seda, Aslanger, Ayca Dilruba, Unverengil, Gokcen, Karaman, Birsen, Basaran, Seher, Demirkol, Mubeccel, Gokcay, Gulden Fatma, and Uyguner, Zehra Oya
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MITOCHONDRIAL DNA ,LIMB-girdle muscular dystrophy ,MITOCHONDRIA ,GENETIC variation ,GENETIC counseling ,DNA - Abstract
Background: Mitochondrial diseases are the most common group of inherited metabolic disorders, causing difficulties in definite diagnosis due to clinical and genetic heterogeneity. Clinical components are predominantly associated with pathogenic variants shown in nuclear or mitochondrial genomes that affect vital respiratory chain function. The development of high-throughput sequencing technologies has accelerated the elucidation of the genetic etiology of many genetic diseases that previously remained undiagnosed. Methods: Thirty affected patients from 24 unrelated families with clinical, radiological, biochemical, and histopathological evaluations considered for mitochondrial diseases were investigated. DNA isolated from the peripheral blood samples of probands was sequenced for nuclear exome and mitochondrial DNA (mtDNA) analyses. MtDNA sequencing was also performed from the muscle biopsy material in one patient. For segregation, Sanger sequencing is performed for pathogenic alterations in five other affected family members and healthy parents. Results: Exome sequencing revealed 14 different pathogenic variants in nine genes encoding mitochondrial function peptides (AARS2, EARS2, ECHS1, FBXL4, MICOS13, NDUFAF6, OXCT1, POLG, and TK2) in 12 patients from nine families and four variants in genes encoding important for muscle structure (CAPN3, DYSF, and TCAP) in six patients from four families. Three probands carried pathogenic mtDNA variations in two genes (MT-ATP6 and MT-TL1). Nine variants in five genes are reported for the first time with disease association: (AARS2: c.277C>T/p.(R93*), c.845C>G/p.(S282C); EARS2: c.319C>T/p.(R107C), c.1283delC/p.(P428Lfs*); ECHS1: c.161G>A/p.(R54His); c.202G>A/p.(E68Lys); NDUFAF6: c.479delA/p.(N162Ifs*27); and OXCT1: c.1370C>T/p.(T457I), c.1173-139G>T/p.(?). Conclusion: Bi-genomic DNA sequencing clarified genetic etiology in 67% (16/24) of the families. Diagnostic utility by mtDNA sequencing in 13% (3/24) and exome sequencing in 54% (13/24) of the families prioritized searching for nuclear genome pathologies for the first-tier test. Weakness and muscle wasting observed in 17% (4/24) of the families underlined that limb-girdle muscular dystrophy, similar to mitochondrial myopathy, is an essential point for differential diagnosis. The correct diagnosis is crucial for comprehensive genetic counseling of families. Also, it contributes to making treatment-helpful referrals, such as ensuring early access to medication for patients with mutations in the TK2 gene. [ABSTRACT FROM AUTHOR]
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- 2023
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36. Urine heat shock protein 70 levels as a marker of urinary tract infection in children
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Yilmaz, Alev, Yildirim, Zeynep Yuruk, Emre, Sevinc, Gedikbasi, Asuman, Yildirim, Tarik, Dirican, Ahmet, and Ucar, Evren Onay
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Urinary tract infections -- Genetic aspects -- Diagnosis -- Research ,Heat shock proteins -- Physiological aspects -- Genetic aspects -- Research ,Biological markers -- Physiological aspects -- Genetic aspects -- Research ,Health - Abstract
Background Heat shock proteins (HSPs) are a multi-family group of proteins which are upregulated by the cell in response to exposure to hazardous (stress) factors, including infectious agents, to prevent changes in protein structure. The aim of our study was to assess whether urine levels of the 70-kDa family of HSPs (HSP70s) increase in children with urinary tract infection (UTI) and to determine the optimal urine (u) HSP70 cut-off level to predict UTI in children. Methods Forty patients with symptomatic UTI (UTI group), 30 healthy children (control group), 21 asymptomatic patients with proven bacterial contamination in their urine culture (contamination group) and 30 patients with fever caused by other infections (non-UTI infection group) were enrolled in the study. Random urine samples were obtained for measurement of HSP70 and creatinine (Cr) from all groups. Urine was collected prior to the treatment of UTI at the time of presentation and after treatment. Urine HSP70 levels were measured by enzyme-linked immunosorbent analysis. A dimercaptosuccinic acid (DMSA) scan was performed at 5-7 days after presentation in UTI group to distinguish patients with acute pyelonephritis from those with cystitis; based on this scan, no patients had acute pyelonephritis. Patients were classified with pyelonephritis in the presence of all of the following signs: axillary fever of [greater than or equal to]39 °C, leukocytosis and positivity for C-reactive protein. Results The mean urine HSP70:Cr ratio (uHSP70/Cr) prior to treatment was significantly higher in the UTI group (449.86 ± 194.33 pg/mg) than in the control, contamination and non-UTI infection groups (39.93 ± 47.61, 32.43 ± 9.09 and 45.14 ± 19.76, respectively; p = 0.0001). Using a cut-off of 158 pg/mg uHSP70/Cr for the prediction of UTI, the sensitivity and specificity of the assay were 100 and 100 %, respectively (area under the time-concentration curve = 1). The uHSP70/Cr was highest in the patients with clinical pyelonephritis (p = 0.001). Mean uHSP70/Cr after treatment decreased to 60.68 ± 51.11 pg/mg in UTI group (p = 0 .0001). Conclusions Our findings suggest that elevated uHSP70/Cr may be a useful biomarker for the prediction of UTI in children, with a high sensitivity and specificity, and that they may help to distinguish UTI from other infections as well as bacterial contamination of the urine., Author(s): Alev Yilmaz[sup.1] , Zeynep Yuruk Yildirim[sup.1] , Sevinc Emre[sup.1] , Asuman Gedikbasi[sup.2] , Tarik Yildirim[sup.3] , Ahmet Dirican[sup.4] , Evren Onay Ucar[sup.5] Author Affiliations: (1) Istanbul Faculty of Medicine, [...]
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- 2016
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37. Investigation of fetal cardiac function using tissue doppler imaging in fetuses compromised by growth restriction
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Ali Gedikbasi, Başak Kaya, Rabia Merve Palalioglu, Halil Ibrahim Erbiyik, and Huseyin Kiyak
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Cardiac function curve ,medicine.medical_specialty ,Doppler imaging ,Ultrasonography, Prenatal ,symbols.namesake ,Fetal Heart ,Growth restriction ,Pregnancy ,Internal medicine ,medicine ,Humans ,Prospective Studies ,Myocardial Performance Index ,Isovolumetric contraction ,Fetus ,Fetal Growth Retardation ,business.industry ,Obstetrics and Gynecology ,Echocardiography, Doppler ,medicine.anatomical_structure ,Ventricle ,cardiovascular system ,symbols ,Cardiology ,Female ,business ,Doppler effect - Abstract
Objectives: The primary aim of this study was to evaluate fetal cardiac systolic and diastolic function using the tissue Doppler technique in pregnancies with complications of fetal growth restriction (FGR) and to examine the relationship between FGR with umbilical artery Doppler parameters and fetal cardiac function in complicated pregnancies. Material and methods: This study included 30 pregnant women with FGR complications and 46 pregnant women without FGR complications. Both groups were at 24–34 gestational weeks. Fetal cardiac examination was performed using pulsed Doppler and tissue Doppler imaging (TDI) in all pregnancies. In the analysis of myocardial tissue by tissue Doppler, the tracing obtained from the junction of the tricuspid valve annulus with the right ventricle was recorded by measuring the duration of the isovolumetric contraction wave (IVC), ejection time (ET), and isovolumetric relaxation time (IVR). Furthermore, we calculated the myocardial performance index (MPI) and then measured and recorded the early diastolic annular rate. Results: Based on the TDI studies, the mean IVC and IVR values were significantly longer and the ET values were significantly shorter in the study group than those in the control group. The study group also had significantly longer MPI measurements. Conclusions: Because TDI is a considerably more sensitive method than cardiac sonographic evaluation using pulsed Doppler, tissue Doppler parameters facilitate the detection of cardiac dysfunction at a relatively early stage. In addition, TDI and myocardial evaluation in fetuses with FGR can be noninvasively performed in clinical practice.
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- 2021
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38. Urinary HSP70 improves diagnostic accuracy for urinary tract infection in children: UTILISE study
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Yilmaz, Alev, primary, Afonso, Alberto Caldas, additional, Akil, Ipek, additional, Aksu, Bagdagul, additional, Alpay, Harika, additional, Atmis, Bahriye, additional, Aydog, Ozlem, additional, Bayazıt, Aysun Karabay, additional, Bayram, Meral Torun, additional, Bilge, Ilmay, additional, Bulut, Ipek Kaplan, additional, Buyukkaragoz, Bahar, additional, Comak, Elif, additional, Demir, Belde Kasap, additional, Dincel, Nida, additional, Donmez, Osman, additional, Durmus, Mehmet Akif, additional, Dursun, Hasan, additional, Dusunsel, Ruhan, additional, Duzova, Ali, additional, Ertan, Pelin, additional, Gedikbasi, Asuman, additional, Goknar, Nilufer, additional, Guven, Sercin, additional, Hacihamdioglu, Duygu, additional, Jankauskiene, Augustina, additional, Kalyoncu, Mukaddes, additional, Kavukcu, Salih, additional, Kenan, Bahriye Uzun, additional, Kucuk, Nuran, additional, Kural, Bahar, additional, Litwin, Mieczysław, additional, Montini, Giovanni, additional, Morello, William, additional, Nayir, Ahmet, additional, Obrycki, Lukasz, additional, Omer, Beyhan, additional, Ozdemir, Ebru Misirli, additional, Ozkayin, Nese, additional, Paripovic, Dusan, additional, Pehlivanoglu, Cemile, additional, Saygili, Seha, additional, Schaefer, Susanne, additional, Sonmez, Ferah, additional, Tabel, Yilmaz, additional, Tas, Nesrin, additional, Tasdemir, Mehmet, additional, Teixeira, Ana, additional, Tekcan, Demet, additional, Tulpar, Sebahat, additional, Turkkan, Ozde Nisa, additional, Uysal, Berfin, additional, Uysalol, Metin, additional, Vaiciuniene, Daiva, additional, Yavuz, Sevgi, additional, Yel, Sibel, additional, Yildirim, Tarik, additional, Yildirim, Zeynep Yuruk, additional, Yildiz, Nurdan, additional, Yuksel, Selcuk, additional, Yurtseven, Eray, additional, Schaefer, Franz, additional, and Topaloglu, Rezan, additional
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- 2022
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39. The Effect of Host miRNAs on Prognosis in COVID-19: miRNA-155 May Promote Severity via Targeting Suppressor of Cytokine Signaling 1 (SOCS1) Gene
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Gedikbasi, Asuman, primary, Adas, Gokhan, additional, Isiksacan, Nilgun, additional, Kart Yasar, Kadriye, additional, Canbolat Unlu, Esra, additional, Yilmaz, Rabia, additional, Hergunsel, Gulsum Oya, additional, and Cukurova, Zafer, additional
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- 2022
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40. The Effect of Host miRNAs on Prognosis in COVID-19: miRNA-155 May Promote Severity via Targeting Suppressor of Cytokine Signaling 1 (
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Asuman, Gedikbasi, Gokhan, Adas, Nilgun, Isiksacan, Kadriye, Kart Yasar, Esra, Canbolat Unlu, Rabia, Yilmaz, Gulsum Oya, Hergunsel, and Zafer, Cukurova
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MicroRNAs ,Suppressor of Cytokine Signaling 1 Protein ,SARS-CoV-2 ,COVID-19 ,Cytokines ,Humans ,Prognosis - Abstract
The epigenetic features contribute to variations in host susceptibility to SARS-CoV-2 infection and severity of symptoms. This study aimed to evaluate the relationship between the relative expression of microRNAs (miRNAs) and the severity of the disease in COVID-19 patients. The miRNA profiles were monitored during the different stages of the disease course using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). The expression levels of the selected 11 miRNAs were measured in the blood samples collected from 73 patients (moderate
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- 2022
41. Twin Pregnancies Complicated by a Single Malformed Fetus: Chorionicity, Outcome and Management
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Gedikbasi, Ali, Akyol, Alpaslan, Yildirim, Gokhan, Ekiz, Ali, Gul, Ahmet, and Ceylan, Yavuz
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- 2010
42. Screening occult anal sphincter injuries in primigravid women after vaginal delivery with transperineal use of vaginal probe: a prospective, randomized controlled trial
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Ozyurt, Sezin, Aksoy, Huseyin, Gedikbasi, Ali, Yildirim, Gokhan, Aksoy, Ulku, Acmaz, Gokhan, and Ark, Cemal
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- 2015
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43. Treatment of twin reversed arterial perfusion sequence with alcohol ablation or bipolar cord coagulation
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Corbacioglu, Aytul, Gul, Ahmet, Bakirci, Isil T., Gedikbasi, Ali, and Yildirim, Gokhan
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- 2012
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44. Mutation identification and prediction for severe cardiomyopathy in Alström syndrome, and review of the literature for cardiomyopathy
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Dedeoglu, Savas, primary, Dede, Elif, additional, Oztunc, Funda, additional, Gedikbasi, Asuman, additional, Yesil, Gozde, additional, and Dedeoglu, Reyhan, additional
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- 2022
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45. Serum prolidase activity in patients with cardiac syndrome X
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Mehmet Kocak, Bülent Demir, Seref Kul, Gonul Aciksari, Adem Atici, Asuman Gedikbasi, Turgut Uygun, Omer Faruk Baycan, and Orkide Kutlu
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collagen ,Dipeptidase ,medicine.medical_specialty ,Vascular fibrosis ,serum prolidase activity ,lcsh:Medicine ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Cardiac syndrome X ,medicine ,In patient ,Endothelial dysfunction ,lcsh:R5-920 ,biology ,business.industry ,cardiac syndrome x ,lcsh:R ,Mean age ,medicine.disease ,Pathophysiology ,biology.protein ,Original Article ,business ,lcsh:Medicine (General) ,030217 neurology & neurosurgery ,Oxidative stress - Abstract
OBJECTIVE: Although the underlying mechanism is not yet fully understood, Cardiac Syndrome X (CSX) is defined as microvascular dysfunction. Prolidase plays a role in collagen synthesis. Increased serum prolidase activity (SPA) has been shown to correlate with collagen turnover. Augmented collagen turn-over may be associated with vascular fibrosis and microvascular dysfunction. In this study, we assessed whether there was a correlation between CXS and prolidase activity. METHODS: This case-control study included 45 consecutive CSX patients (mean age 50.7+-6.5 years, 27 women) and 40 healthy controls (mean age 51.2+-6.5 years, 25 women). Prolidase activity was determined with the Human Xaa-Pro Dipeptidase/Prolidase enzyme-linked immunosorbent assay kit (Cusabio Biotech Co. Ltd, China). RESULTS: Mean prolidase activity was 898.8+-639.1 mU/mL in the CSX group and 434.1+-289.8 mU/mL in the control group (p
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- 2020
46. Does fetal MR alter the management of pregnancy in the diagnosis of isolated corpus callosum agenesis?
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Alper Gezdirici, Ali Gedikbasi, Salim Sezer, Mustafa Behram, Züat Acar, Zeynep Gedik Özköse, and Gaye Kahveci
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Fetus ,medicine.medical_specialty ,Pregnancy ,Obstetrics ,Corpus Callosum Agenesis ,business.industry ,Gynecology and obstetrics ,General Medicine ,medicine.disease ,Pediatrics ,RJ1-570 ,parasitic diseases ,cardiovascular system ,RG1-991 ,medicine ,business - Abstract
Objective To determine if fetal MR alters the management of pregnancy and family decisions in the isolated corpus callosum agenesis (CCA) cases or not. Methods Fetal MR was carried out in the cases diagnosed with CCA in the Perinatology Unit of our hospital between 2013 and 2019 after they were differentiated as complex and isolated CCA cases. The impact of MR results on the family decisions and their approaches towards termination were assessed. Results A total of 109 out 139 cases were evaluated as isolated CCA. While 93 (85.32%) of them were diagnosed with the complete CCA, 16 (14.68%) cases were diagnosed with the partial CCA. When the period after 2017 during which fetal MR was recommended to all patients was reviewed, it was seen that 7 (23.3%) of 30 cases who underwent fetal MR and 2 (20%) of 10 cases who did not undergo fetal MR terminated their pregnancies. There was no statistical difference between two groups in terms of the decisions of the patients for gestational termination who did and did not undergo fetal MR. Conclusion Fetal MR imaging in the isolated CCA does not change the decisions of the families for the gestational termination. In terms of the termination decision, week of gestation and socio-cultural factors may have more impacts.
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- 2020
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47. Endocan as a predictor of increased cardiovascular risk during the menopausal transition period
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Hüseyin Cengiz, Ismail Alay, Levent Yaşar, Asuman Gedikbasi, Şükrü Yıldız, Aysun Fendal Tunca, Emine Öztürk, and Cihan Kaya
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medicine.medical_specialty ,Positive correlation ,Carotid Intima-Media Thickness ,Gastroenterology ,Cohort Studies ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Internal medicine ,Humans ,Medicine ,cardiovascular diseases ,Endothelial dysfunction ,030219 obstetrics & reproductive medicine ,Postmenopausal women ,business.industry ,Obstetrics and Gynecology ,General Medicine ,Middle Aged ,medicine.disease ,Neoplasm Proteins ,Menopause ,Cross-Sectional Studies ,Blood pressure ,Premenopause ,Cardiovascular Diseases ,030220 oncology & carcinogenesis ,Cohort ,cardiovascular system ,Biomarker (medicine) ,Female ,Proteoglycans ,business ,Body mass index - Abstract
Our aim was to investigate the serum endocan levels and carotid artery intima-media thickness (CIMT) measurements of pre- and postmenopausal patients to clarify the relationship between the menopausal transition and endothelial injury. This cross-sectional study was conducted on women who were premenopausal and postmenopausal between January 2019 and June 2019. The patients were divided into two groups according to premenopausal (n = 32) and postmenopausal (n = 32) status. Serum endocan levels were assessed by enzyme-linked immunosorbent assay (ELISA). CIMT ultrasonographic measurements were determined. Hormonal and biochemical parameters were measured. The validated Menopause Rating Scale (MRS) questionnaire was used on all women. Serum endocan levels were significantly higher in the postmenopausal group than in the premenopausal group (222.90 ± 121.00 ng/L and 146.62 ± 41.88 ng/L, p = 0.033, respectively). The mean CIMT was significantly higher in the postmenopausal group than in the premenopausal cohort (0.70 ± 0.14 mm and 0.58 ± 0.11 mm, p
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- 2020
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48. Urinary HSP70 improves diagnostic accuracy for urinary tract infection in children: UTILISE study
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Alev Yilmaz, Alberto Caldas Afonso, Ipek Akil, Bagdagul Aksu, Harika Alpay, Bahriye Atmis, Ozlem Aydog, Aysun Karabay Bayazıt, Meral Torun Bayram, Ilmay Bilge, Ipek Kaplan Bulut, Bahar Buyukkaragoz, Elif Comak, Belde Kasap Demir, Nida Dincel, Osman Donmez, Mehmet Akif Durmus, Hasan Dursun, Ruhan Dusunsel, Ali Duzova, Pelin Ertan, Asuman Gedikbasi, Nilufer Goknar, Sercin Guven, Duygu Hacihamdioglu, Augustina Jankauskiene, Mukaddes Kalyoncu, Salih Kavukcu, Bahriye Uzun Kenan, Nuran Kucuk, Bahar Kural, Mieczysław Litwin, Giovanni Montini, William Morello, Ahmet Nayir, Lukasz Obrycki, Beyhan Omer, Ebru Misirli Ozdemir, Nese Ozkayin, Dusan Paripovic, Cemile Pehlivanoglu, Seha Saygili, Susanne Schaefer, Ferah Sonmez, Yilmaz Tabel, Nesrin Tas, Mehmet Tasdemir, Ana Teixeira, Demet Tekcan, Sebahat Tulpar, Ozde Nisa Turkkan, Berfin Uysal, Metin Uysalol, Daiva Vaiciuniene, Sevgi Yavuz, Sibel Yel, Tarik Yildirim, Zeynep Yuruk Yildirim, Nurdan Yildiz, Selcuk Yuksel, Eray Yurtseven, Franz Schaefer, and Rezan Topaloglu
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Urinary tract infection ,Heat shock proteins ,Nephrology ,Heat-Shock-Protein-70 ,UTI ,Pediatrics, Perinatology and Child Health ,Fluid ,Children ,Heat-Shock Proteins ,HSP70 - Abstract
Background The accuracy of conventional urinalysis in diagnosing urinary tract infection (UTI) in children is limited, leading to unnecessary antibiotic exposure in a large fraction of patients. Urinary heat shock protein 70 (uHSP70) is a novel marker of acute urinary tract inflammation. We explored the added value of uHSP70 in discriminating UTI from other infections and conditions confused with UTI. Methods A total of 802 children from 37 pediatric centers in seven countries participated in the study. Patients diagnosed with UTI (n = 191), non-UTI infections (n = 178), contaminated urine samples (n = 50), asymptomatic bacteriuria (n = 26), and healthy controls (n = 75) were enrolled. Urine and serum levels of HSP70 were measured at presentation in all patients and after resolution of the infection in patients with confirmed UTI. Results Urinary (u)HSP70 was selectively elevated in children with UTI as compared to all other conditions (p < 0.0001). uHSP70 predicted UTI with 89% sensitivity and 82% specificity (AUC = 0.934). Among the 265 patients with suspected UTI, the uHSP70 > 48 ng/mL criterion identified the 172 children with subsequently confirmed UTI with 90% sensitivity and 82% specificity (AUC = 0.862), exceeding the individual diagnostic accuracy of leukocyturia, nitrite, and leukocyte esterase positivity. uHSP70 had completely normalized by the end of antibiotic therapy in the UTI patients. Serum HSP70 was not predictive. Conclusions Urine HSP70 is a novel non-invasive marker of UTI that improves the diagnostic accuracy of conventional urinalysis. We estimate that rapid urine HSP70 screening could spare empiric antibiotic administration in up to 80% of children with suspected UTI., Scientific Research Projects Coordination Unit of Istanbul University; European Society for Pediatric Nephrology (ESPN); Society for Children's Kidney Health; Istanbul Faculty of Medicine Foundation, UTILISE study was supported by Scientific Research Projects Coordination Unit of Istanbul University, by the European Society for Pediatric Nephrology (ESPN), by the Society for Children's Kidney Health, and by Istanbul Faculty of Medicine Foundation.
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- 2022
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49. Evaluation of Glycogen Storage Patients: Report of Twelve Novel Variants and New Clinical Findings in a Turkish Population
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Melike Ersoy, Bulent Uyanik, Asuman Gedikbasi, and UYANIK, BÜLENT
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Male ,novel variants ,Turkey ,Infant, Newborn ,Infant ,Genomics ,QH426-470 ,Glycogen Storage Disease ,United States ,Article ,glycogen storage disease ,Child, Preschool ,Mutation ,genotype–phenotype ,Genetics ,Humans ,Female ,new clinic findings ,Child ,Genetic Association Studies ,Glycogen ,Genetics (clinical) ,Retrospective Studies - Abstract
Glycogen storage diseases (GSDs) are clinically and genetically heterogeneous disorders that disturb glycogen synthesis or utilization. Although it is one of the oldest inherited metabolic disorders, new genetic methods and long-time patient follow-ups provide us with unique insight into the genotype–phenotype correlations. The aim of this study was to share the phenotypic features and molecular diagnostic results that include new pathogenic variants in our GSD cases. Twenty-six GSD patients were evaluated retrospectively. Demographic data, initial laboratory and imaging features, and current findings of the patients were recorded. Molecular analysis results were classified as novel or previously defined variants. Novel variants were analyzed with pathogenicity prediction tools according to American College of Medical Genetics and Genomics (ACGM) criteria. Twelve novel and rare variants in six different genes were associated with the disease. Hearing impairment in two patients with GSD I, early peripheral neuropathy after liver transplantation in one patient with GSD IV, epilepsy and neuromotor retardation in three patients with GSD IXA were determined. We characterized a heterogeneous group of all diagnosed GSDs over a 5-year period in our institution, and identified novel variants and new clinical findings. It is still difficult to establish a genotype–phenotype correlation in GSDs.
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- 2021
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50. Serum Adiponectin Levels in High School Girls with Polycystic Ovary Syndrome and Hyperandrogenism
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Yasar, L., Ekin, M., Gedikbasi, A., Erturk, A.D., Savan, K., Ozdemir, A., and Temur, M.
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- 2011
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