42 results on '"Geddes T"'
Search Results
2. Seamless histories and the politics of bias in art museums.
- Author
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Geddes, T.
- Published
- 1990
3. The incidence and outcome of brain metastases after liver resection for colorectal cancer metastases
- Author
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Byrne, B. E., Geddes, T., Welsh, F. K. S., John, T. G., Chandrakumaran, K., and Rees, M.
- Published
- 2012
- Full Text
- View/download PDF
4. The existence of a local 5-hydroxytryptaminergic system in peripheral arteries
- Author
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Ni, W, Geddes, T J, Priestley, J R C, Szasz, T, Kuhn, D M, and Watts, S W
- Published
- 2008
- Full Text
- View/download PDF
5. Foreign Body In The Appendix
- Author
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Geddes, T. G., Fernandez, B., and Duffy, B. L.
- Published
- 1972
6. Early Decompression following Cervical Spinal Cord Injury: Examining the Process of Care from Accident Scene to Surgery.
- Author
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Battistuzzo, CR, Armstrong, A, Clark, J, Worley, L, Sharwood, L, Lin, P, Rooke, G, Skeers, P, Nolan, S, Geraghty, T, Nunn, A, Brown, DJ, Hill, S, Alexander, J, Millard, M, Cox, SF, Rao, S, Watts, A, Goods, L, Allison, GT, Agostinello, J, Cameron, PA, Mosley, I, Liew, SM, Geddes, T, Middleton, J, Buchanan, J, Rosenfeld, JV, Bernard, S, Atresh, S, Patel, A, Schouten, R, Freeman, BJC, Dunlop, SA, Batchelor, PE, Battistuzzo, CR, Armstrong, A, Clark, J, Worley, L, Sharwood, L, Lin, P, Rooke, G, Skeers, P, Nolan, S, Geraghty, T, Nunn, A, Brown, DJ, Hill, S, Alexander, J, Millard, M, Cox, SF, Rao, S, Watts, A, Goods, L, Allison, GT, Agostinello, J, Cameron, PA, Mosley, I, Liew, SM, Geddes, T, Middleton, J, Buchanan, J, Rosenfeld, JV, Bernard, S, Atresh, S, Patel, A, Schouten, R, Freeman, BJC, Dunlop, SA, and Batchelor, PE
- Abstract
Early decompression may improve neurological outcome after spinal cord injury (SCI), but is often difficult to achieve because of logistical issues. The aims of this study were to 1) determine the time to decompression in cases of isolated cervical SCI in Australia and New Zealand and 2) determine where substantial delays occur as patients move from the accident scene to surgery. Data were extracted from medical records of patients aged 15-70 years with C3-T1 traumatic SCI between 2010 and 2013. A total of 192 patients were included. The median time from accident scene to decompression was 21 h, with the fastest times associated with closed reduction (6 h). A significant decrease in the time to decompression occurred from 2010 (31 h) to 2013 (19 h, p = 0.008). Patients undergoing direct surgical hospital admission had a significantly lower time to decompression, compared with patients undergoing pre-surgical hospital admission (12 h vs. 26 h, p < 0.0001). Medical stabilization and radiological investigation appeared not to influence the timing of surgery. The time taken to organize the operating theater following surgical hospital admission was a further factor delaying decompression (12.5 h). There was a relationship between the timing of decompression and the proportion of patients demonstrating substantial recovery (2-3 American Spinal Injury Association Impairment Scale grades). In conclusion, the time of cervical spine decompression markedly improved over the study period. Neurological recovery appeared to be promoted by rapid decompression. Direct surgical hospital admission, rapid organization of theater, and where possible, use of closed reduction, are likely to be effective strategies to reduce the time to decompression.
- Published
- 2016
7. Early decompression following cervical spinal cord injury: examining the process of care from accident scene to surgery
- Author
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Battistuzzo, C., Armstrong, A., Clark, J., Worley, L., Sharwood, L., Lin, P., Rooke, G., Skeers, P., Nolan, S., Geragthy, T., Nunn, A., Brown, D., Hill, S., Alexander, J., Millard, M., Cox, S., Rao, S., Watts, A., Goods, L., Allison, Garry, Laurenson, J., Cameron, P., Mosley, I., Liew, S., Geddes, T., Middleton, J., Buchanan, J., Rosenfeld, J., Bernard, S., Atresh, S., Patel, A., Schouten, R., Freeman, B., Dunlop, S., Batchelor, P., Battistuzzo, C., Armstrong, A., Clark, J., Worley, L., Sharwood, L., Lin, P., Rooke, G., Skeers, P., Nolan, S., Geragthy, T., Nunn, A., Brown, D., Hill, S., Alexander, J., Millard, M., Cox, S., Rao, S., Watts, A., Goods, L., Allison, Garry, Laurenson, J., Cameron, P., Mosley, I., Liew, S., Geddes, T., Middleton, J., Buchanan, J., Rosenfeld, J., Bernard, S., Atresh, S., Patel, A., Schouten, R., Freeman, B., Dunlop, S., and Batchelor, P.
- Abstract
Early decompression may improve neurological outcome after spinal cord injury (SCI), but is often difficult to achieve because of logistical issues. The aims of this study were to determine (1) the time to decompression in cases of isolated cervical SCI in Australia and New Zealand and (2) where substantial delays occur as patients move from the accident scene to surgery. Data were extracted from medical records of patients aged 15-70 years with C3-T1 traumatic SCI between 2010 and 2013. A total of 192 patients were included. The median time from accident scene to decompression was 21h, with the fastest times associated with closed reduction (6h). A significant decrease in the time to decompression occurred from 2010 (31h) to 2013 (19h, p = 0.008). Patients undergoing direct surgical hospital admission had a significantly lower time to decompression compared to patients undergoing pre-surgical hospital admission (12h vs. 26h, p < 0.0001)). Medical stabilisation and radiological investigation appeared not to influence the timing of surgery. The time taken to organise theatre following surgical hospital admission was a further factor delaying decompression (12.5h). There was a relationship between the timing of decompression and the proportion of patients demonstrating substantial recovery (2-3 AIS grades). In conclusion, the time of cervical spine decompression markedly improved over the study period. Neurological recovery appeared to be promoted by rapid decompression. Direct surgical hospital admission, rapid organisation of theatre and where possible use of closed reduction, are likely to be effective strategies to reduce the time to decompression.
- Published
- 2015
8. Gene Expression Patterns in Pancreatic Neuroendocrine Tumors Suggest Resistance to Radiation Therapy
- Author
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Stone, B.M., primary, Baschnagel, A.M., additional, Thibodeau, B., additional, Fortier, L.E., additional, Geddes, T., additional, Pruetz, B.L., additional, Ketelsen, B.E., additional, Jury, R.P., additional, and Wilson, G.D., additional
- Published
- 2014
- Full Text
- View/download PDF
9. University First Year Advisors: A network approach for first year student transition and retention. A Practice Report
- Author
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Box, G., Callan, N., Geddes, T, Kemp, H.M., Wojcieszek, J.M., Box, G., Callan, N., Geddes, T, Kemp, H.M., and Wojcieszek, J.M.
- Abstract
Focussing expressly on student support and retention, improving the first year experience has been addressed by Murdoch University through the implementation of a School discipline-specific network of professional First Year Advisors (FYAs). FYA initiatives, both broad-based and varied, have been developed in alignment with the changing needs of students as identified throughout the semesters. A combination of outreach telephone campaigns and face-to-face student support enables FYAs to conduct a "just in time" approach to positively increase student engagement, and ultimately, retention. With a bespoke database, FYAs and academic staff have been able to streamline the process of reporting students in need of support, and gather data relating to student retention. The FYA program is yet to be formally evaluated although initial feedback and student consultation is promising. This paper outlines the program's development, current initiatives and expected outcomes.
- Published
- 2012
10. Pasture growth and quality on Southland and Otago dairy farms
- Author
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Dalley, D.E., primary and Geddes, T., additional
- Published
- 2012
- Full Text
- View/download PDF
11. PP 47 Prediction of non-responders to chemoradiation in HPV-positive head and neck cancers by gene expression profiling
- Author
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Wilson, G., primary, Thibodeau, B., additional, Geddes, T., additional, Ahmed, S., additional, Pruetz, B., additional, Chen, P., additional, and Akerval, J., additional
- Published
- 2011
- Full Text
- View/download PDF
12. Gene expression profiling predicts nonresponders to chemoradiation in HPV16-positive head and neck squamous cell carcinoma.
- Author
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Thibodeau, B. J., primary, Geddes, T. J., additional, Ahmed, S., additional, Pruetz, B. L., additional, Chen, P. Y., additional, Wilson, G. D., additional, and Akervall, J. A., additional
- Published
- 2011
- Full Text
- View/download PDF
13. The migration of fragments of glass from the pockets to the surfaces of clothing
- Author
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O'Sullivan, S., primary, Geddes, T., additional, and Lovelock, T.J., additional
- Published
- 2011
- Full Text
- View/download PDF
14. Isolation and Characterization of Stem Cells in Head and Neck Cancer
- Author
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Wilson, G.D., primary, Galoforo, S., additional, Marples, B., additional, Geddes, T., additional, Thibodeau, B., additional, Park, S., additional, and Akervall, J., additional
- Published
- 2010
- Full Text
- View/download PDF
15. Improving the Working Environment and Drilling Economics Through Better Understanding of Oil-Based Drilling Fluid Chemistry
- Author
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James, R. W., primary, Schei, T., additional, Navestad, P., additional, Geddes, T. A., additional, Nelson, M. G., additional, and Webster, D., additional
- Published
- 2000
- Full Text
- View/download PDF
16. Improving the Working Environment and Drilling Economics through Better Understanding of Oil Based Drilling Fluid Chemistry
- Author
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James, R., additional, Navestad, P., additional, Schei, T., additional, Geddes, T., additional, Nelson, G., additional, and Webster, D., additional
- Published
- 1999
- Full Text
- View/download PDF
17. Transcriptional suppression of cellular gene expression by c-Myc
- Author
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Yang, B S, primary, Geddes, T J, additional, Pogulis, R J, additional, de Crombrugghe, B, additional, and Freytag, S O, additional
- Published
- 1991
- Full Text
- View/download PDF
18. Report and discussion on “Leadership in management—the elusive element”.
- Author
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Smith, Brian P., Kirk, K.M., Muirhead, D.C., Lovell, M.J., Nickols, Ian, Geddes, T., Grief, C.M., Lee, A.W., Murray, Rea, G.W., Darvall, R.C.B., Russell, Robin, Robinson, W., Goodman, Landon, O'Kelly, S.V., Brice, J.M., Casson, J., Brosan, G.S., and Hancock, E.W.
- Published
- 1969
- Full Text
- View/download PDF
19. Peroxynitrite inactivates tryptophan hydroxylase via sulfhydryl oxidation. Coincident nitration of enzyme tyrosyl residues has minimal impact on catalytic activity.
- Author
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Kuhn, D M and Geddes, T J
- Abstract
Tryptophan hydroxylase, the initial and rate-limiting enzyme in serotonin biosynthesis, is inactivated by peroxynitrite in a concentration-dependent manner. This effect is prevented by molecules that react directly with peroxynitrite such as dithiothreitol, cysteine, glutathione, methionine, tryptophan, and uric acid but not by scavengers of superoxide (superoxide dismutase), hydroxyl radical (Me(2)SO, mannitol), and hydrogen peroxide (catalase). Assuming simple competition kinetics between peroxynitrite scavengers and the enzyme, a second-order rate constant of 3.4 x 10(4) M(-1) s(-1) at 25 degrees C and pH 7.4 was estimated. The peroxynitrite-induced loss of enzyme activity was accompanied by a concentration-dependent oxidation of protein sulfhydryl groups. Peroxynitrite-modified tryptophan hydroxylase was resistant to reduction by arsenite, borohydride, and dithiothreitol, suggesting that sulfhydryls were oxidized beyond sulfenic acid. Peroxynitrite also caused the nitration of tyrosyl residues in tryptophan hydroxylase, with a maximal modification of 3.8 tyrosines/monomer. Sodium bicarbonate protected tryptophan hydroxylase from peroxynitrite-induced inactivation and lessened the extent of sulfhydryl oxidation while causing a 2-fold increase in tyrosine nitration. Tetranitromethane, which oxidizes sulfhydryls at pH 6 or 8, but which nitrates tyrosyl residues at pH 8 only, inhibited tryptophan hydroxylase equally at either pH. Acetylation of tyrosyl residues with N-acetylimidazole did not alter tryptophan hydroxylase activity. These data suggest that peroxynitrite inactivates tryptophan hydroxylase via sulfhydryl oxidation. Modification of tyrosyl residues by peroxynitrite plays a relatively minor role in the inhibition of tryptophan hydroxylase catalytic activity.
- Published
- 1999
20. Acute malaria in newborn infants.
- Author
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Geddes, T G, primary
- Published
- 1970
- Full Text
- View/download PDF
21. Murine collagen intron-binding factor 1 (CIBF-1) is the same protein as transcription factor Oct-1
- Author
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Pogulis, R. J., Geddes, T. J., and Freytag, S. O.
- Published
- 1995
- Full Text
- View/download PDF
22. Preoperative comprehensive geriatric assessment and multidisciplinary team input in older people undergoing elective orthopaedic surgery: A feasibility trial.
- Author
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Mearns A, Siu ATY, Birdling M, Geddes T, and Kenealy H
- Subjects
- Humans, Aged, Male, Female, Retrospective Studies, Aged, 80 and over, New Zealand, Age Factors, Frailty diagnosis, Polypharmacy, Predictive Value of Tests, Patient Compliance, Frail Elderly, Feasibility Studies, Geriatric Assessment, Patient Care Team, Elective Surgical Procedures, Orthopedic Procedures, Preoperative Care methods
- Abstract
Objective: To determine the feasibility of preoperative comprehensive geriatric assessment (CGA) and multidisciplinary team (MDT) input for older people undergoing elective orthopaedic surgery in a tertiary New Zealand setting., Methods: This single-centre retrospective study included elective orthopaedic patients older than 65 years (and Māori/Pasifika aged greater than 55 years) with hyperpolypharmacy, frailty, neurocognitive disorders and poor functional status. Patients attended a preoperative clinic where they had a geriatrician-led CGA along with MDT input. The feasibility of this preoperative model was assessed using outcomes of acceptability, accessibility and adherence. A qualitative description of patient demographics along with clinic assessment and interventions further describes this pilot experience., Results: Sixty patients met inclusion criteria. This group were vulnerable older people (median age 77 years), with a high incidence of hyperpolypharmacy (85%), frailty (80%) and neurocognitive disorders (30%). Acceptability was high (97%), along with CGA accessibility (100%); however, MDT accessibility varied (53-90%). Adherence to MDT intervention was low; with only 26% of patients completing physiotherapy sessions and only 29% adhering to dietary advice. Accurate recall was a significant factor contributing to poor adherence. Comprehensive geriatric assessment was demonstrated to be a broad and flexible intervention., Conclusions: CGA with MDT input is an acceptable and accessible intervention to be utilised as part of improved preoperative care for the older person undergoing elective orthopaedic surgery. Further consideration around methods to increase adherence in this patient group should be explored. Future research should focus on refining the intervention, and quantifying impact on patient outcomes., (© 2024 AJA Inc’.)
- Published
- 2024
- Full Text
- View/download PDF
23. Genome-wide analysis in Drosophila reveals diet-by-gene interactions and uncovers diet-responsive genes.
- Author
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Francis D, Ghazanfar S, Havula E, Krycer JR, Strbenac D, Senior A, Minard AY, Geddes T, Nelson ME, Weiss F, Stöckli J, Yang JYH, and James DE
- Subjects
- Animals, Diet, High-Fat, Drosophila melanogaster, Genotype, Humans, Phenotype, Drosophila genetics, Drosophila Proteins genetics
- Abstract
Genetic and environmental factors play a major role in metabolic health. However, they do not act in isolation, as a change in an environmental factor such as diet may exert different effects based on an individual's genotype. Here, we sought to understand how such gene-diet interactions influenced nutrient storage and utilization, a major determinant of metabolic disease. We subjected 178 inbred strains from the Drosophila genetic reference panel (DGRP) to diets varying in sugar, fat, and protein. We assessed starvation resistance, a holistic phenotype of nutrient storage and utilization that can be robustly measured. Diet influenced the starvation resistance of most strains, but the effect varied markedly between strains such that some displayed better survival on a high carbohydrate diet (HCD) compared to a high-fat diet while others had opposing responses, illustrating a considerable gene × diet interaction. This demonstrates that genetics plays a major role in diet responses. Furthermore, heritability analysis revealed that the greatest genetic variability arose from diets either high in sugar or high in protein. To uncover the genetic variants that contribute to the heterogeneity in starvation resistance, we mapped 566 diet-responsive SNPs in 293 genes, 174 of which have human orthologs. Using whole-body knockdown, we identified two genes that were required for glucose tolerance, storage, and utilization. Strikingly, flies in which the expression of one of these genes, CG4607 a putative homolog of a mammalian glucose transporter, was reduced at the whole-body level, displayed lethality on a HCD. This study provides evidence that there is a strong interplay between diet and genetics in governing survival in response to starvation, a surrogate measure of nutrient storage efficiency and obesity. It is likely that a similar principle applies to higher organisms thus supporting the case for nutrigenomics as an important health strategy., (© The Author(s) 2021. Published by Oxford University Press on behalf of Genetics Society of America.)
- Published
- 2021
- Full Text
- View/download PDF
24. Signaling Heterogeneity is Defined by Pathway Architecture and Intercellular Variability in Protein Expression.
- Author
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Norris D, Yang P, Shin SY, Kearney AL, Kim HJ, Geddes T, Senior AM, Fazakerley DJ, Nguyen LK, James DE, and Burchfield JG
- Abstract
Insulin's activation of PI3K/Akt signaling, stimulates glucose uptake by enhancing delivery of GLUT4 to the cell surface. Here we examined the origins of intercellular heterogeneity in insulin signaling. Akt activation alone accounted for ~25% of the variance in GLUT4, indicating that additional sources of variance exist. The Akt and GLUT4 responses were highly reproducible within the same cell, suggesting the variance is between cells (extrinsic) and not within cells (intrinsic). Generalized mechanistic models (supported by experimental observations) demonstrated that the correlation between the steady-state levels of two measured signaling processes decreases with increasing distance from each other and that intercellular variation in protein expression (as an example of extrinsic variance) is sufficient to account for the variance in and between Akt and GLUT4. Thus, the response of a population to insulin signaling is underpinned by considerable single-cell heterogeneity that is largely driven by variance in gene/protein expression between cells., Competing Interests: The authors declare no competing interests., (© 2021 The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
25. Great Lakes Biorepository Research Network's Annual Biobanking Symposium: A Focus on Precision Medicine.
- Author
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Paulauskis JD, Blanc VM, Carey T, Chesla DW, Frey RC, Geddes T, Keats J, Loup A, Pruetz B, Rohrer DC, Valley DR, Tomlinson T, Akervall J, Wilson GD, and Jewell SD
- Subjects
- Congresses as Topic, Great Lakes Region, Humans, Intersectoral Collaboration, Precision Medicine, Biological Specimen Banks, Specimen Handling methods
- Published
- 2019
- Full Text
- View/download PDF
26. Interleukin-8 blockade prevents activated endothelial cell mediated proliferation and chemoresistance of acute myeloid leukemia.
- Author
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Vijay V, Miller R, Vue GS, Pezeshkian MB, Maywood M, Ast AM, Drusbosky LM, Pompeu Y, Salgado AD, Lipten SD, Geddes T, Blenc AM, Ge Y, Ostrov DA, Cogle CR, and Madlambayan GJ
- Subjects
- Antineoplastic Agents chemistry, Biomarkers, Cell Line, Tumor, Cell Proliferation drug effects, Cell Survival drug effects, Cytarabine pharmacology, Humans, Interleukin-8 chemistry, Leukemia, Myeloid, Acute drug therapy, Leukemia, Myeloid, Acute genetics, Models, Molecular, Structure-Activity Relationship, Antineoplastic Agents pharmacology, Drug Resistance, Neoplasm, Endothelial Cells drug effects, Endothelial Cells metabolism, Interleukin-8 antagonists & inhibitors, Leukemia, Myeloid, Acute metabolism
- Abstract
One of the greatest challenges in treating acute myeloid leukemia (AML) is chemotherapy refractory disease. Previously, we demonstrated a novel mechanism whereby AML-induced endothelial cell (EC) activation leads to subsequent leukemia cell adherence, quiescence and chemoresistance, identifying activated ECs as potential mediators of relapse. We now show mechanistically that EC activation induces the secretion of interleukin-8 (IL-8) leading to significant expansion of non-adherent AML cells and resistance to cytarabine (Ara-C). Through crystallography and computational modeling, we identified a pocket within IL-8 responsible for receptor binding, screened for small molecules that fit within this pocket, and blocked IL-8 induced proliferation and chemo-protection of AML cells with a hit compound. Results from this study show a new therapeutic strategy for targeting the sanctuary of an activated leukemia microenvironment., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
27. Diagnostic Biomarkers of Alzheimer's Disease as Identified in Saliva using 1H NMR-Based Metabolomics.
- Author
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Yilmaz A, Geddes T, Han B, Bahado-Singh RO, Wilson GD, Imam K, Maddens M, and Graham SF
- Subjects
- Aged, Aged, 80 and over, Alzheimer Disease metabolism, Cognitive Dysfunction metabolism, Early Diagnosis, Female, Humans, Logistic Models, Male, Mental Status Schedule, ROC Curve, Alzheimer Disease diagnosis, Cognitive Dysfunction diagnosis, Metabolomics methods, Proton Magnetic Resonance Spectroscopy methods, Saliva metabolism
- Abstract
Using 1H NMR metabolomics, we biochemically profiled saliva samples collected from healthy-controls (n = 12), mild cognitive impairment (MCI) sufferers (n = 8), and Alzheimer's disease (AD) patients (n = 9). We accurately identified significant concentration changes in 22 metabolites in the saliva of MCI and AD patients compared to controls. This pilot study demonstrates the potential for using metabolomics and saliva for the early diagnosis of AD. Given the ease and convenience of collecting saliva, the development of accurate and sensitive salivary biomarkers would be ideal for screening those at greatest risk of developing AD.
- Published
- 2017
- Full Text
- View/download PDF
28. Early Decompression following Cervical Spinal Cord Injury: Examining the Process of Care from Accident Scene to Surgery.
- Author
-
Battistuzzo CR, Armstrong A, Clark J, Worley L, Sharwood L, Lin P, Rooke G, Skeers P, Nolan S, Geraghty T, Nunn A, Brown DJ, Hill S, Alexander J, Millard M, Cox SF, Rao S, Watts A, Goods L, Allison GT, Agostinello J, Cameron PA, Mosley I, Liew SM, Geddes T, Middleton J, Buchanan J, Rosenfeld JV, Bernard S, Atresh S, Patel A, Schouten R, Freeman BJ, Dunlop SA, and Batchelor PE
- Subjects
- Adolescent, Adult, Aged, Australia, Female, Humans, Male, Middle Aged, New Zealand, Young Adult, Cervical Cord injuries, Cervical Cord surgery, Decompression, Surgical statistics & numerical data, Outcome and Process Assessment, Health Care statistics & numerical data, Spinal Cord Injuries surgery
- Abstract
Early decompression may improve neurological outcome after spinal cord injury (SCI), but is often difficult to achieve because of logistical issues. The aims of this study were to 1) determine the time to decompression in cases of isolated cervical SCI in Australia and New Zealand and 2) determine where substantial delays occur as patients move from the accident scene to surgery. Data were extracted from medical records of patients aged 15-70 years with C3-T1 traumatic SCI between 2010 and 2013. A total of 192 patients were included. The median time from accident scene to decompression was 21 h, with the fastest times associated with closed reduction (6 h). A significant decrease in the time to decompression occurred from 2010 (31 h) to 2013 (19 h, p = 0.008). Patients undergoing direct surgical hospital admission had a significantly lower time to decompression, compared with patients undergoing pre-surgical hospital admission (12 h vs. 26 h, p < 0.0001). Medical stabilization and radiological investigation appeared not to influence the timing of surgery. The time taken to organize the operating theater following surgical hospital admission was a further factor delaying decompression (12.5 h). There was a relationship between the timing of decompression and the proportion of patients demonstrating substantial recovery (2-3 American Spinal Injury Association Impairment Scale grades). In conclusion, the time of cervical spine decompression markedly improved over the study period. Neurological recovery appeared to be promoted by rapid decompression. Direct surgical hospital admission, rapid organization of theater, and where possible, use of closed reduction, are likely to be effective strategies to reduce the time to decompression.
- Published
- 2016
- Full Text
- View/download PDF
29. Addressing the Challenge of Financial Sustainability in Biobanking.
- Author
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Campos AH, Schreeder M, Parry-Jones A, Abdelhafiz AS, Larson D, Pruetz B, Geddes T, Salman A, and Lazaris A
- Subjects
- Brazil, Feasibility Studies, Interviews as Topic, Models, Economic, Biological Specimen Banks economics, Biological Specimen Banks organization & administration, Biomedical Research economics, Financial Management
- Published
- 2015
- Full Text
- View/download PDF
30. Evaluation of optimal RNA extraction method from human carotid atherosclerotic plaque.
- Author
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Ahmed S, Shaffer A, Geddes T, Studzinski D, Mitton K, Pruetz B, Long G, and Shanley C
- Subjects
- Humans, Real-Time Polymerase Chain Reaction, Carotid Artery Diseases genetics, Plaque, Atherosclerotic genetics, RNA isolation & purification, Tissue Preservation methods
- Abstract
Investigating molecular mechanisms involved in the formation of carotid atherosclerotic plaques has been challenging. Isolating high-quality RNA from plaque tissue can be difficult because of acellularity, calcification, and degradation. It is essential that the mRNA isolated from this tissue preserves and reflects the actual relative gene expression. Two common methods for RNA preservation, snap-freezing and stabilizing reagent, were compared using surgically resected human carotid atherosclerotic tissue. In addition, isolation methods were compared for integrity and quantity: column-based extraction, phenol-based extraction, and a combination of the two. We found that using a stabilizing reagent with column filtration resulted in the lowest yield and quality. Phenol-based extraction resulted in higher yields but also increased fragmentation. Snap-frozen tissue coupled with column-based extraction yielded the highest quality. The higher quality and quantity RNA obtained when processing snap-frozen tissue with column-based extraction make it possible to use difficult sample types for molecular downstream applications., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
31. Leukemia Mediated Endothelial Cell Activation Modulates Leukemia Cell Susceptibility to Chemotherapy through a Positive Feedback Loop Mechanism.
- Author
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Pezeshkian B, Donnelly C, Tamburo K, Geddes T, and Madlambayan GJ
- Subjects
- Antineoplastic Agents pharmacology, Cell Adhesion, Cell Communication, Cell Line, Tumor, Coculture Techniques, Drug Resistance, Neoplasm drug effects, E-Selectin metabolism, Feedback, Physiological drug effects, Humans, Recurrence, Human Umbilical Vein Endothelial Cells metabolism, Leukemia, Myeloid, Acute metabolism, Leukemia, Myeloid, Acute pathology, Signal Transduction
- Abstract
In acute myeloid leukemia (AML), the chances of achieving disease-free survival are low. Studies have demonstrated a supportive role of endothelial cells (ECs) in normal hematopoiesis. Here we show that similar intercellular relationships exist in leukemia. We demonstrate that leukemia cells themselves initiate these interactions by directly modulating the behavior of resting ECs through the induction of EC activation. In this inflammatory state, activated ECs induce the adhesion of a sub-set of leukemia cells through the cell adhesion molecule E-selectin. These adherent leukemia cells are sequestered in a quiescent state and are unaffected by chemotherapy. The ability of adherent cells to later detach and again become proliferative following exposure to chemotherapy suggests a role of this process in relapse. Interestingly, differing leukemia subtypes modulate this process to varying degrees, which may explain the varied response of AML patients to chemotherapy and relapse rates. Finally, because leukemia cells themselves induce EC activation, we postulate a positive-feedback loop in leukemia that exists to support the growth and relapse of the disease. Together, the data defines a new mechanism describing how ECs and leukemia cells interact during leukemogenesis, which could be used to develop novel treatments for those with AML.
- Published
- 2013
- Full Text
- View/download PDF
32. Changes in renal markers and acute kidney injury after marathon running.
- Author
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McCullough PA, Chinnaiyan KM, Gallagher MJ, Colar JM, Geddes T, Gold JM, and Trivax JE
- Subjects
- Acute-Phase Proteins urine, Adult, Biomarkers blood, Biomarkers urine, Creatine blood, Cystatin C blood, Female, Hepatitis A Virus Cellular Receptor 1, Humans, Lipocalin-2, Lipocalins urine, Magnetic Resonance Imaging, Male, Membrane Glycoproteins urine, Middle Aged, Proto-Oncogene Proteins urine, Receptors, Virus, Vena Cava, Inferior anatomy & histology, Acute Kidney Injury blood, Acute Kidney Injury urine, Running physiology
- Abstract
Background: The impact of marathon running on kidney function has not been previously described., Methods: From 425 marathon runners, 13 women and 12 men were randomly selected and cardiovascular magnetic resonance imaging (MRI) and blood/urine biomarkers were performed 4 weeks before (baseline), immediately after (peak), and 24 h after the race (recovery)., Results: Participants were 38.7 ± 9.0 years old and completed the marathon in 256.2 ± 43.5 min. A total of 10/25 (40.0%) met the Acute Kidney Injury Network definition of acute kidney injury (AKI) based on a rise in serum creatinine. There were parallel and similar mean rises in serum creatinine and cystatin C from baseline, to peak, and return to normal in recovery. Urine neutrophil gelatinase-associated lipocalin rose from 8.2 ± 4.0 to 47.0 ± 28.6 and returned to 10.6 ± 7.2 ng/mL, P < 0.0001. Likewise, the mean urinary kidney injury molecule-1 levels were 2.6 ± 1.6, 3.5 ± 1.6 and 2.7 ± 1.6 ng/mL (P = 0.001). The mean and minimum pre- and post-IVC (inferior vena cava) diameters by MRI were 24.9, 18.8 and 25.3, 17.5 mm, respectively, suggesting that runners were not volume depleted at the first post-race measurement., Conclusion: Approximately 40% of marathon runners experience a transient rise in serum creatinine that meets criteria of AKI with a parallel elevation of cystatin C, and supportive elevations of neutrophil gelatinase-associated lipocalin and kidney injury molecule-1 in the urine. All biomarker elevations resolved by 24 h. These data suggest that AKI with a transient and minor change in renal filtration function occurs with the stress of marathon running. The impact of repetitive episodes of AKI with long-distance running is unknown., (© 2010 The Authors. Nephrology © 2010 Asian Pacific Society of Nephrology.)
- Published
- 2011
- Full Text
- View/download PDF
33. Skin protection beneath the tourniquet. A prospective randomized trial.
- Author
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Din R and Geddes T
- Subjects
- Adult, Aged, Aged, 80 and over, Arthroplasty, Replacement, Knee methods, Arthroscopy methods, Female, Humans, Male, Middle Aged, Postoperative Complications etiology, Prospective Studies, Treatment Outcome, Wounds and Injuries etiology, Postoperative Complications prevention & control, Skin injuries, Tourniquets adverse effects, Wounds and Injuries prevention & control
- Abstract
Background: Complications have been reported as a consequence of tourniquet application. These include skin abrasions, blisters and, breaks. The purpose of the present study was to evaluate the difference in clinical outcome using tourniquets with and without skin protection., Methods: A prospective randomized trial was performed on consecutive patients undergoing elective total knee replacement or knee arthroscopy. The patients were randomly allocated to one of three treatment groups: group 1, tourniquet without skin protection; group 2, tourniquet with Soffban skin protection (BSN Medical, Melbourne, Australia); and group 3, tourniquet with the Atlantech skin protection drape (Atlantech Medical Devices, Harrogate, UK). All patients had identical tourniquets, tourniquet pressure and skin sterilization method. At the conclusion of the case, the tourniquet was removed and the skin beneath the tourniquet was inspected and recorded into one of four categories: skin normal, skin abrasions, skin blisters and skin break., Results: One hundred and fifty consecutive eligible patients having a total knee replacement or arthroscopy were included in the present study. There were 82 total knee replacements and 68 knee arthroscopies There were 89 women and 61 men, the mean age was 51 years. No significant difference in patient demographics were found between the groups. The overall skin complication rate was lower in the tourniquet skin protected groups. Total skin complication rate in the non-skin tourniquet protected group was 12 patients out of 50. In the skin protected tourniquet groups, the number of skin complications was six out of 100. This was statistically significant P = 0.0034 (chi2-test)., Conclusion: We recommend that lower limb tourniquets should be used with skin protection beneath them.
- Published
- 2004
- Full Text
- View/download PDF
34. Dopamine biosynthesis is regulated by S-glutathionylation. Potential mechanism of tyrosine hydroxylast inhibition during oxidative stress.
- Author
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Borges CR, Geddes T, Watson JT, and Kuhn DM
- Subjects
- Amino Acid Sequence, Animals, Diamide pharmacology, Molecular Sequence Data, Rats, Reverse Transcriptase Polymerase Chain Reaction, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Dopamine biosynthesis, Glutathione metabolism, Oxidative Stress, Tyrosine 3-Monooxygenase antagonists & inhibitors
- Abstract
Tyrosine hydroxylase (TH), the initial and rate-limiting enzyme in the biosynthesis of the neurotransmitter dopamine, is inhibited by the sulfhydryl oxidant diamide in a concentration-dependent manner. The inhibitory effect of diamide on TH catalytic activity is enhanced significantly by GSH. Treatment of TH with diamide in the presence of [(35)S]GSH results in the incorporation of (35)S into the enzyme. The effect of diamide-GSH on TH activity is prevented by dithiothreitol (DTT), as is the binding of [(35)S]GSH, indicating the formation of a disulfide linkage between GSH and TH protein cysteinyls. Loss of TH catalytic activity caused by diamide-GSH is partially recovered by DTT and glutaredoxin, whereas the disulfide linkage of GSH with TH is completely reversed by both. Treatment of intact PC12 cells with diamide results in a concentration-dependent inhibition of TH activity. Incubation of cells with [(35)S]cysteine, to label cellular GSH prior to diamide treatment, followed by immunoprecipitation of TH shows that the loss of TH catalytic activity is associated with a DTT-reversible incorporation of [(35)S]GSH into the enzyme. A combination of matrix-assisted laser desorption/ionization/mass spectrometry and liquid chromatography/tandem mass spectrometry was used to identify the sites of S-glutathionylation in TH. Six cysteines (177, 249, 263, 329, 330, and 380) of the seven cysteine residues in TH were confirmed as substrates for modification. Only Cys-311 was not S-glutathionylated. These results establish that TH activity is influenced in a reversible manner by S-glutathionylation and suggest that cellular GSH may regulate dopamine biosynthesis under conditions of oxidative stress or drug-induced toxicity.
- Published
- 2002
- Full Text
- View/download PDF
35. Peroxynitrite-induced nitration of tyrosine hydroxylase: identification of tyrosines 423, 428, and 432 as sites of modification by matrix-assisted laser desorption ionization time-of-flight mass spectrometry and tyrosine-scanning mutagenesis.
- Author
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Kuhn DM, Sadidi M, Liu X, Kreipke C, Geddes T, Borges C, and Watson JT
- Subjects
- Catalysis, Dopamine biosynthesis, Electrophoresis, Polyacrylamide Gel, Humans, Mutagenesis, Site-Directed, Mutation, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Tyrosine chemistry, Nitrogen metabolism, Peroxynitrous Acid pharmacology, Tyrosine metabolism, Tyrosine 3-Monooxygenase metabolism
- Abstract
Tyrosine hydroxylase (TH), the initial and rate-limiting enzyme in the biosynthesis of the neurotransmitter dopamine, is inactivated by peroxynitrite. The sites of peroxynitrite-induced tyrosine nitration in TH have been identified by matrix-assisted laser desorption time-of-flight mass spectrometry and tyrosine-scanning mutagenesis. V8 proteolytic fragments of nitrated TH were analyzed by matrix-assisted laser desorption time-of-flight mass spectrometry. A peptide of 3135.4 daltons, corresponding to residues V410-E436 of TH, showed peroxynitrite-induced mass shifts of +45, +90, and +135 daltons, reflecting nitration of one, two, or three tyrosines, respectively. These modifications were not evident in untreated TH. The tyrosine residues (positions 423, 428, and 432) within this peptide were mutated to phenylalanine to confirm the site(s) of nitration and assess the effects of mutation on TH activity. Single mutants expressed wild-type levels of TH catalytic activity and were inactivated by peroxynitrite while showing reduced (30-60%) levels of nitration. The double mutants Y423F,Y428F, Y423F,Y432F, and Y428F,Y432F showed trace amounts of tyrosine nitration (7-30% of control) after exposure to peroxynitrite, and the triple mutant Y423F,Y428F,Y432F was not a substrate for nitration, yet peroxynitrite significantly reduced the activity of each. When all tyrosine mutants were probed with PEO-maleimide activated biotin, a thiol-reactive reagent that specifically labels reduced cysteine residues in proteins, it was evident that peroxynitrite resulted in cysteine oxidation. These studies identify residues Tyr(423), Tyr(428), and Tyr(432) as the sites of peroxynitrite-induced nitration in TH. No single tyrosine residue appears to be critical for TH catalytic function, and tyrosine nitration is neither necessary nor sufficient for peroxynitrite-induced inactivation. The loss of TH catalytic activity caused by peroxynitrite is associated instead with oxidation of cysteine residues.
- Published
- 2002
- Full Text
- View/download PDF
36. Molecular footprints of neurotoxic amphetamine action.
- Author
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Kuhn DM and Geddes TJ
- Subjects
- Blotting, Western methods, Dose-Response Relationship, Drug, Drug Interactions, Hydrogen-Ion Concentration, In Vitro Techniques, Molecular Weight, Peroxynitrous Acid pharmacology, Tetranitromethane metabolism, Tyrosine 3-Monooxygenase metabolism, Amphetamines toxicity, Neurotoxins toxicity, Protein Footprinting methods
- Abstract
Methamphetamine (METH) and 3,4-methylenedioxymethamphetamine (MDMA or Ecstasy) are amphetamine analogs with high abuse potential. These drugs also cause damage to dopamine and serotonin nerve terminals in vivo. The mechanisms by which these drugs cause neurotoxicity are not known, but a great deal of attention has been focused on reactive oxygen species (ROS) and reactive nitrogen species (RNS) as mediators of this toxicity. ROS and RNS have very short biological half-lives in vivo, and it is virtually impossible to measure them in brain directly. However, ROS and RNS are also characterized by their extreme reactivity with proteins and nucleotides. Tryptophan hydroxylase (TPH) and tyrosine hydroxylase (TH), the initial and rate limiting enzymes in the synthesis of serotonin and dopamine, respectively, are identified targets for the actions of METH and MDMA. Using recombinant forms of these proteins, we have found that nitric oxide, catechol-quinones, and peroxynitrite, all of which are potentially produced by the neurotoxic amphetamines, covalently modify both TPH and TH. The ROS and RNS cause reductions in catalytic function of these enzymes in a manner that is consistent with the effects of METH and MDMNA in vivo. Protein-bound ROS or RNS may serve as molecular footprints of neurotoxic amphetamine action.
- Published
- 2000
- Full Text
- View/download PDF
37. Peroxynitrite inactivation of tyrosine hydroxylase: mediation by sulfhydryl oxidation, not tyrosine nitration.
- Author
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Kuhn DM, Aretha CW, and Geddes TJ
- Subjects
- Bicarbonates pharmacology, Enzyme Activation drug effects, Nitrates metabolism, Oxidation-Reduction, Pyrimidines pharmacology, Pyrroles pharmacology, Tetranitromethane pharmacology, Tyrosine metabolism, Tyrosine 3-Monooxygenase antagonists & inhibitors, Tyrosine 3-Monooxygenase drug effects, Nitrates pharmacology, Oxidants pharmacology, Sulfhydryl Compounds metabolism, Tyrosine 3-Monooxygenase metabolism
- Abstract
Tyrosine hydroxylase (TH) is the initial and rate-limiting enzyme in the biosynthesis of dopamine (DA). TH activity is significantly diminished in Parkinson's disease (PD) and by the neurotoxic amphetamines, thereby accentuating the reductions in DA associated with these conditions. Reactive oxygen and nitrogen species have been implicated in the damage to DA neurons seen in PD and in reaction to amphetamine drugs of abuse, so we investigated the hypothesis that peroxynitrite (ONOO(-)) could interfere with TH catalytic function. ONOO(-) caused a concentration-dependent inactivation of TH. The inactivation was associated with tyrosine nitration (maximum of four tyrosine residues nitrated per TH monomer) and extensive sulfhydryl oxidation. Tetranitromethane, which causes sulfhydryl oxidation at pH 6 and 8 but which nitrates tyrosines only at pH 8, inactivated TH equally at either pH. Bicarbonate protected TH from ONOO(-)-induced inactivation and sulfhydryl oxidation but increased significantly tyrosine nitration. PNU-101033 blocked ONOO(-)-induced tyrosine nitration in TH but could not prevent enzyme inactivation or sulfhydryl oxidation. Together, these results indicate that the inactivation of TH by ONOO(-) is mediated by sulfhydryl oxidation. The coincident nitration of tyrosine residues appears to exert little influence over TH catalytic function.
- Published
- 1999
38. Platelet-type 12-lipoxygenase regulates angiogenesis in human prostate carcinoma.
- Author
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Nie D, Hillman GG, Geddes T, Tang K, Pierson C, Grignon DJ, and Honn KV
- Subjects
- Animals, Arachidonate 12-Lipoxygenase genetics, Cell Division, Cell Line, Humans, Male, Mice, Mice, Nude, Neoplasm Transplantation, Prostatic Neoplasms pathology, RNA, Messenger genetics, RNA, Messenger metabolism, RNA, Neoplasm genetics, RNA, Neoplasm metabolism, Rats, Transfection, Transplantation, Heterologous, Arachidonate 12-Lipoxygenase blood, Blood Platelets enzymology, Neovascularization, Pathologic enzymology, Prostatic Neoplasms blood supply, Prostatic Neoplasms enzymology
- Published
- 1999
- Full Text
- View/download PDF
39. Platelet-type 12-lipoxygenase in a human prostate carcinoma stimulates angiogenesis and tumor growth.
- Author
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Nie D, Hillman GG, Geddes T, Tang K, Pierson C, Grignon DJ, and Honn KV
- Subjects
- 12-Hydroxy-5,8,10,14-eicosatetraenoic Acid physiology, Animals, Arachidonate 12-Lipoxygenase genetics, Cell Division, Humans, Male, Mice, Mice, Inbred BALB C, Mice, Nude, Neoplasm Proteins genetics, Neovascularization, Pathologic enzymology, Prostatic Neoplasms enzymology, Prostatic Neoplasms pathology, Rats, Transfection, Arachidonate 12-Lipoxygenase physiology, Neoplasm Proteins physiology, Neovascularization, Pathologic pathology, Prostatic Neoplasms blood supply
- Abstract
Previously, we found a positive correlation between the expression of platelet-type 12-lipoxygenase (12-LOX) and the progression of human prostate adenocarcinoma (PCa; Gao et al., Urology, 46: 227-237, 1995). To determine the role of 12-LOX in PCa progression, we generated stable 12-LOX-transfected PC3 cells, which synthesize high levels of 12-LOX protein and 12(S)-hydroxyeicosatetraenoic acid metabolite. In vitro, 12-LOX-transfected PC3 cells demonstrated a proliferation rate similar to neo controls. However, following s.c. injection into athymic nude mice, 12-LOX-transfected PC3 cells formed larger tumors than did the controls. Decreased necrosis and increased vascularization were observed in the tumors from 12-LOX-transfected PC3 cells. Both endothelial cell migration and Matrigel implantation assays indicate that 12-LOX-transfected PC3 cells were more angiogenic than their neo controls. These data indicate that 12-LOX stimulates human PCa tumor growth by a novel angiogenic mechanism.
- Published
- 1998
40. Murine collagen intron-binding factor I (CIBF-I) is the same protein as transcription factor Oct-1.
- Author
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Pogulis RJ, Geddes TJ, and Freytag SO
- Subjects
- Animals, Base Sequence, Binding Sites genetics, Binding, Competitive, Collagen biosynthesis, Consensus Sequence, Cross Reactions, DNA-Binding Proteins immunology, DNA-Binding Proteins metabolism, Gene Expression Regulation, Host Cell Factor C1, Mice, Molecular Sequence Data, Octamer Transcription Factor-1, Protein Binding, Transcription Factors immunology, Transcription Factors metabolism, Collagen genetics, DNA-Binding Proteins genetics, Transcription Factors genetics, Transcription, Genetic
- Abstract
The recognition sequence (CIB) of collagen intron-binding factor I (CIBF-I) loosely resembles the consensus octamer-binding motif (OCT). In the present study we investigate whether CIBF-I is actually the OCT-binding protein, Oct-1. Electrophoretic mobility-shift assays (EMSA) demonstrate that a consensus OCT motif effectively competes for CIBF-I binding. CIBF-I and Oct-1 complexes display similar EMSA characteristics, and both factors are detected in nuclear extracts of five different cell types. In addition, pre-incubation of nuclear extracts with antiserum directed against the POU domain of Oct-1 inhibits CIBF-I complex formation. Finally, DNA transfection experiments demonstrate that a single copy of the CIB site is sufficient to stimulate transcription from the SV40 early promoter in NIH 3T3 cells. These results suggest that CIBF-I is the ubiquitously distributed OCT-binding protein, Oct-1, and represent the first report that an octamer-binding protein contributes to the transcriptional activity of a collagen-encoding gene.
- Published
- 1995
- Full Text
- View/download PDF
41. Reciprocal regulation of adipogenesis by Myc and C/EBP alpha.
- Author
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Freytag SO and Geddes TJ
- Subjects
- Adipose Tissue metabolism, Animals, Base Sequence, CCAAT-Enhancer-Binding Proteins, Cell Differentiation, Cell Division, Cell Line, DNA-Binding Proteins genetics, Molecular Sequence Data, Nuclear Proteins genetics, Plasmids, Polymerase Chain Reaction, Proto-Oncogene Proteins c-myc genetics, RNA, Messenger analysis, Rats, Transfection, Adipose Tissue cytology, DNA-Binding Proteins physiology, Gene Expression Regulation, Nuclear Proteins physiology, Proto-Oncogene Proteins c-myc physiology
- Abstract
3T3-L1 adipoblasts that express large amounts of c-Myc cannot terminally differentiate, raising the possibility that Myc inhibits the expression of genes that promote adipogenesis. The CCAAT/enhancer binding protein (C/EBP alpha) is induced during 3T3-L1 adipogenesis when cells commit to the differentiation pathway. Transfection of 3T3-L1 adipoblasts with the gene that encodes C/EBP alpha caused overt expression of the adipocyte morphology. Expression of Myc prohibited the normal induction of C/EBP alpha and prevented adipogenesis. Enforced expression of C/EBP alpha overcame the Myc-induced block to differentiation. These results provide a molecular basis for the regulation of adipogenesis and implicate Myc and C/EBP alpha as pivotal controlling elements.
- Published
- 1992
- Full Text
- View/download PDF
42. Transferrin, immunoglobulins and prognosis in measles in the tropics.
- Author
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Geddes TD and Gregory WJ
- Subjects
- Antibody Formation, Child, Preschool, Female, Humans, Immunoglobulin A analysis, Immunoglobulin G analysis, Immunoglobulin M analysis, Infant, Male, Prognosis, Zambia, Immunoglobulins analysis, Measles blood, Transferrin analysis, Tropical Climate
- Published
- 1974
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