100 results on '"Gael J Kergoat"'
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2. Revisiting the taxonomy and molecular systematics of Sesamia stemborers (Lepidoptera: Noctuidae: Apameini: Sesamiina): updated classification and comparative evaluation of species delimitation methods
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Noémie M. C. Hévin, Gael J. Kergoat, Alberto Zilli, Claire Capdevielle-Dulac, Boaz K. Musyoka, Michel Sezonlin, Desmond Conlong, Johnnie Van Den Berg, Rose Ndemah, Philippe Le Gall, Domingos Cugala, Casper Nyamukondiwa, Beatrice Pallangyo, Mohamedi Njaku, Muluken Goftishu, Yoseph Assefa, Onésime Mubenga Kandonda, Grégoire Bani, Richard Molo, Gilson Chipabika, George Ong’amo, Anne-Laure Clamens, Jérôme Barbut, and Bruno Le Ru
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Science - Abstract
In this study, we reassess the phylogenetic relationships of the genus Sesamia Guenée, 1852 and examine in more detail the members of the nonagrioides species group, for which three distinct species complexes are identified. The calamistis subgroup comprises eight species, of which four new species are described: Sesamia kabirara Le Ru sp. nov., Sesamia kalale Le Ru sp. nov., Sesamia mapalense Le Ru sp. nov. and Sesamia teke Le Ru sp. nov. The incerta subgroup consists of 11 species, of which four new species are described: Sesamia kamba Le Ru sp. nov., Sesamia lalaci Le Ru sp. nov., Sesamia lusese Le Ru sp. nov. and Sesamia msowero Le Ru sp. nov. The nonagrioides subgroup comprises ten species of which two new species are described: Sesamia libode Le Ru sp. nov. and Sesamia satauensis Le Ru sp. nov. Phylogenetic and molecular species delimitation analyses of a multi-marker molecular dataset allow us to investigate and clarify the status of Sesamia species and species complexes. Our results yield a well-supported phylogenetic hypothesis for the genus, which supports the monophyletic nature of all but one species subgroup. The results of 16 distinct molecular species delimitation analyses show some levels of incongruence and, overall, a tendency towards over-splitting. We also present an updated list of species for the genus Sesamia and provide morphological keys based on male and female genitalia to determine the species group of any Sesamia species and to identify all species belonging to the nonagrioides species group.
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- 2024
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3. Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae).
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Pascaline Dumas, Jérôme Barbut, Bruno Le Ru, Jean-François Silvain, Anne-Laure Clamens, Emmanuelle d'Alençon, and Gael J Kergoat
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Medicine ,Science - Abstract
Nowadays molecular species delimitation methods promote the identification of species boundaries within complex taxonomic groups by adopting innovative species concepts and theories (e.g. branching patterns, coalescence). As some of them can efficiently deal with large single-locus datasets, they could speed up the process of species discovery compared to more time consuming molecular methods, and benefit from the existence of large public datasets; these methods can also particularly favour scientific research and actions dealing with threatened or economically important taxa. In this study we aim to investigate and clarify the status of economically important moths species belonging to the genus Spodoptera (Lepidoptera, Noctuidae), a complex group in which previous phylogenetic analyses and integrative approaches already suggested the possible occurrence of cryptic species and taxonomic ambiguities. In this work, the effectiveness of innovative (and faster) species delimitation approaches to infer putative species boundaries has been successfully tested in Spodoptera, by processing the most comprehensive dataset (in terms of number of species and specimens) ever achieved; results are congruent and reliable, irrespective of the set of parameters and phylogenetic models applied. Our analyses confirm the existence of three potential new species clusters (for S. exigua (Hübner, 1808), S. frugiperda (J.E. Smith, 1797) and S. mauritia (Boisduval, 1833)) and support the synonymy of S. marima (Schaus, 1904) with S. ornithogalli (Guenée, 1852). They also highlight the ambiguity of the status of S. cosmiodes (Walker, 1858) and S. descoinsi Lalanne-Cassou & Silvain, 1994. This case study highlights the interest of molecular species delimitation methods as valuable tools for species discovery and to emphasize taxonomic ambiguities.
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- 2015
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4. Mitochondrial and nuclear genes-based phylogeography of Arvicanthis niloticus (Murinae) and sub-Saharan open habitats pleistocene history.
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Gauthier Dobigny, Caroline Tatard, Philippe Gauthier, Khalilou Ba, Jean-Marc Duplantier, Laurent Granjon, and Gael J Kergoat
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Medicine ,Science - Abstract
A phylogeographic study was conducted on the Nile grass rat, Arvicanthis niloticus, a rodent species that is tightly associated with open grasslands from the Sudano-Sahelian regions. Using one mitochondrial (cytochrome b) and one nuclear (intron 7 of Beta Fibrinogen) gene, robust patterns were retrieved that clearly show that (i) the species originated in East Africa concomitantly with expanding grasslands some 2 Ma, and (ii) four parapatric and genetically well-defined lineages differentiated essentially from East to West following Pleistocene bioclimatic cycles. This strongly points towards allopatric genetic divergence within savannah refuges during humid episodes, then dispersal during arid ones; secondary contact zones would have then stabilized around geographic barriers, namely, Niger River and Lake Chad basins. Our results pertinently add to those obtained for several other African rodent as well as non-rodent species that inhabit forests, humid zones, savannahs and deserts, all studies that now allow one to depict a more comprehensive picture of the Pleistocene history of the continent south of the Sahara. In particular, although their precise location remains to be determined, at least three Pleistocene refuges are identified within the West and Central African savannah biome.
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- 2013
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5. Palaeoenvironmental shifts drove the adaptive radiation of a noctuid stemborer tribe (Lepidoptera, Noctuidae, Apameini) in the miocene.
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Emmanuel F A Toussaint, Fabien L Condamine, Gael J Kergoat, Claire Capdevielle-Dulac, Jérôme Barbut, Jean-François Silvain, and Bruno P Le Ru
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Medicine ,Science - Abstract
Between the late Oligocene and the early Miocene, climatic changes have shattered the faunal and floral communities and drove the apparition of new ecological niches. Grassland biomes began to supplant forestlands, thus favouring a large-scale ecosystem turnover. The independent adaptive radiations of several mammal lineages through the evolution of key innovations are classic examples of these changes. However, little is known concerning the evolutionary history of other herbivorous groups in relation with this modified environment. It is especially the case in phytophagous insect communities, which have been rarely studied in this context despite their ecological importance. Here, we investigate the phylogenetic and evolutionary patterns of grass-specialist moths from the species-rich tribe Apameini (Lepidoptera, Noctuidae). The molecular dating analyses carried out over the corresponding phylogenetic framework reveal an origin around 29 million years ago for the Apameini. Ancestral state reconstructions indicate (i) a potential Palaearctic origin of the tribe Apameini associated with a major dispersal event in Afrotropics for the subtribe Sesamiina; (ii) a recent colonization from Palaearctic of the New World and Oriental regions by several independent lineages; and (iii) an ancestral association of the tribe Apameini over grasses (Poaceae). Diversification analyses indicate that diversification rates have not remained constant during the evolution of the group, as underlined by a significant shift in diversification rates during the early Miocene. Interestingly, this age estimate is congruent with the development of grasslands at this time. Rather than clade ages, variations in diversification rates among genera better explain the current differences in species diversity. Our results underpin a potential adaptive radiation of these phytophagous moths with the family Poaceae in relation with the major environmental shifts that have occurred in the Miocene.
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- 2012
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6. The allopolyploid origin(s) and diversification of New Caledonian Grevillea (Proteaceae)
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Yohan Pillon, Pauline Majourau, Karine Gotty, Sandrine Isnard, Bruno Fogliani, Mark W. Chase, and Gael J. Kergoat
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Plant Science - Published
- 2023
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7. Late Cenozoic environmental changes drove the diversification of a weevil genus endemic to the Cape Floristic Region
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Noémie M.‐C. Hévin, Steffan Hansen, Pia Addison, Laure Benoit, Gael J. Kergoat, Julien Haran, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Université de Poitiers, Stellenbosch University, Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), and The first author was supported by a grant from the CBGP laboratory (Montpellier, France) for her Master's degree.
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biodiversity hotspot ,Phlyctinus callosus ,[SDV]Life Sciences [q-bio] ,Genetics ,Entiminae ,Animal Science and Zoology ,sea level oscillations ,banded fruit weevil ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,allopatric speciation - Abstract
We thank the Western Cape Nature Conservation Board (permit No. CN44-30-4229), the Cape Research Centre (South African National Parks, CRC/2019-2020/012-2012/V1) and Grootbos Private Nature reserve for authorization to collect specimens in the Western Cape province of South Africa.; International audience; The Cape Floristic Region in the Republic of South Africa is a well-recognized hotspot of biodiversity. Although this region is mostly known for its high level of plant diversity and endemicity, it also hosts an understudied and likely diverse arthropod fauna. Here we investigate the evolutionary history and timing of diversification of the apterous weevil genus Phlyctinus (Curculionidae: Entiminae), which is endemic to the coastal area and adjacent mountain ranges of the Cape floristic region and generally associated with sunflower plants (Asteraceae). We use a diverse array of molecular analyses (phylogenetic inference, molecular species delimitation and dating analyses) to analyse a novel molecular dataset of 202 weevil specimens (including 170 Phlyctinus sampled in 60 sites), and sequenced for two mitochondrial and four nuclear gene fragments. Phylogenetic and dating analyses indicate that the genus started diversifying in the late Miocene, with contrasting diversification dynamics for the three inferred clades, which present disjunct distributions. Host plant records and the lack of relatedness of species living in sympatry indicate that the diversification of Phlyctinus was predominantly driven by allopatric (geographic) speciation. We hypothesize that the interplay between topography and recurring cycles of coastline-habitat fragmentation resulting from sea level oscillations spurred the diversification of the most speciose clade, whereas in the two remaining clades populations likely remained connected thus hampering allopatric speciation. Interestingly, this pattern echoes with the role of sea level oscillations as an important driver of the radiation of several lineages in the coastline ecosystems of the Cape Floristic Region.
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- 2022
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8. From monocots to dicots: host shifts in Afrotropical derelomine weevils shed light on the evolution of non-obligatory brood pollination mutualism
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Julien Haran, Şerban Procheş, Laure Benoit, and Gael J Kergoat
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Pollinisateur ,Phylogénie ,Relation plante animal ,L60 - Taxonomie et géographie animales ,Relation hôte pathogène ,H10 - Ravageurs des plantes ,Curculionidae ,Ecology, Evolution, Behavior and Systematics - Abstract
Weevils from the tribe Derelomini (Curculionidae: Curculioninae) are specialized brood pollinators engaged in mutualistic relationships with several angiosperm lineages. In brood pollination systems, reproductive plant tissues are used for the development of insect larval stages, whereas adult insects pollinate their plant hosts as a reward. The evolutionary history of derelomines in relationship to their hosts is poorly understood and potentially contrasts with other brood pollination systems, wherein a pollinator lineage is usually associated with a single host plant family. In the case of Afrotropical Derelomini, host records indicate a diverse host repertoire consisting of several families of monocot and dicot plants. In this study, we investigate their phylogenetic relationships, timing of diversification and evolution of host use. Our results suggest that derelomine lineages started their diversification ~40 Mya. Reconstructions of host use evolution support an ancestral association with the monocotyledonous palm family (Arecaceae), followed by several shifts towards other plant families in Afrotropical lineages, especially to dicotyledonous plants from the family Ebenaceae (on the genus Euclea L.). Some level of phylogenetic conservatism of host use is recovered for the lineages associated with either palms or Euclea. Multiple instances of sympatric weevil assemblages on the same plant are also unravelled, corresponding to either single or independent colonization events. Overall, the diversity of hosts colonized and the frequency of sympatric assemblages highlighted in non-obligatory plant–derelomine brood pollination systems contrast with what is generally expected from plant–insect brood pollination systems.
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- 2022
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9. Evolution, systematics and historical biogeography of Palparini and Palparidiini antlions (Neuroptera: Myrmeleontidae): Old origin and in situ diversification in Southern Africa
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Noémie M.‐C. Hévin, Gael. J. Kergoat, Anne‐Laure Clamens, Bruno Le Ru, Mervyn W. Mansell, Bruno Michel, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Université de Poitiers, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), International Centre of Insect Physiology and Ecology (ICIPE), ICIPE, Department of Zoology and Entomology [Pretoria], University of Pretoria [South Africa], Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), and Financial support was provided by CIRAD (for B. Michel), INRAE (for G.J. Kergoat), by IRD and ICIPE (for B. Le Ru). Some of the sequencing was also supported by the programme BdV (Project ICONE) supported by a joint CNRS, INRAE, and MNHN consortium and through a collaboration with F.L. Condamine (CNRS, UMR ISEM) as part of another research project.
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paleoendemism ,historical biogeography ,Insect Science ,Southern Africa ,systematics ,[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy ,Afrotropics ,Ecology, Evolution, Behavior and Systematics ,antlions ,out of Africa - Abstract
Newly generated sequences were deposited in GenBank, and are registered with the following accession numbers: OQ581997–OQ582070(cob), OQ603605–OQ603608(18S), OQ606012–OQ606168(cox1), OQ624960–OQ625111(rrnL), OQ625113–OQ625252(rrnS) and OQ625254–OQ625279(28S) (see Table S2 for details).This study is dedicated to Dr. André Prost, who passed away on February 3, 2023. André Prost was a well-recognized Neuroptera specialist (former secretary of the International Association of Neuropterology), with a special interest for the West African fauna.Merwyn W.Mansell gratefully acknowledges the following organizations and people who contributed to research on antlion diversity in SouthernAfrica: Oppenheimer Generations Research and Conservation, the Tswalu Foundation, and Nicky, Jonathan and Strilli Oppenheimer ,who have actively encouraged and permitted Neuroptera research in their private reserves, Tswalu Kalahari Reserve and Rooipoort; Duncan MacFadyen (Oppenheimer Generations, Head Research and Con-servation), Dylan Smith (Tswalu Kalahari Reserve), who facilitated ourvisits and provided key specimens. Also, (i) the National Parks Boardof South Africa is acknowledged for permits enabling Neuroptera research in the Kalahari Gemsbok National Park (now Kgalagadi Transfrontier Park), the Kruger National Park and Karoo National Park,and the staff of these parks who enabled the visits and provided valuable material: (L.E.O. Braack, A. Braack, H. Braack; Dr S. Joubert), (C.E.O., Kruger Park); (ii) Northern Cape Nature Conservation is thanked for providing permits for the northern Cape region; (iii) the KwaZulu-Natal Parks are acknowledged for permission to work on their reserves. Dr M.K. Seely, Director of the Namib Desert Research Station at Gobabeb is thanked for providing facilities and much scientifico-operation over the years; (iv) the Directorate of Nature Conservation and Recreational Resorts of Namibia are acknowledged for use offacilities at Gobabeb and permission to work in the Namib/NaukluftPark, many years ago. Professor Clarke H. Scholtz (University of Pretoria) is especially thanked for organizing many of the field trips thatprocured important material. Merwyn W. Mansell also gratefullyacknowledges the following people especially, for providing crucial specimens: J.B. Ball (University of Pretoria), A.K. (Tony) Brinkman, A.J.Gardiner, H. de Klerk, P. Hawkes, D.M. Kroon, W. Jubber, A.P. Marais,R.W. Mansell, L.R. Minter, R.G. Oberprieler, H.S Staude, R.D. Stephenand those mentioned in Mansell and Oswald (2023). The JRS Biodiversity Foundation and GBIF are sincerely thanked for funding M.W.Mansell’s Southern African Lacewing project, especially the development of the “Palpares Relational Database” designed by Brian Kenyon,which underpinned the accumulation and collation of much data usedin this presentation, for which he is gratefully acknowledged. Whileworking at icipe (African Insect Science for Food and Health), B. Le Rubenefited from research and collect permits delivered by the KenyaPlant Health Inspectorate Service (KEPHIS) (B. Le Ru thanks A. Kibe,B. Musyoka, L. Ngala, G. Okuku and G. Ong’amo) and the Plant Pro-tection Division of the Ministry of Agriculture of Botswana (B. Le Ru EVOLUTION AND SYSTEMATICS OF PALPARINE ANTLIONS thanks C. Nyakumondiwa, R. Mutamisha and E. Moeng). Bruno Michel also thanks the following people for providing several interesting specimens: B.F. Jacobs (Southern Methodist University, USA), M.Martinez (INRAE) and J.-Y. Rasplus (INRAE). We gratefully acknowledge the late A. Prost for communicating important information on the genusNosa. We are also indebted to the following persons whogave us permission to use pictures they took: S. Akame, T. Cardenos,H. de Klerk, G. Kunz, D. Robertson, H. Robertson, H. Roland, W.Roland and A.T. Schoeman. Laboratory facilities were provided by CBGP in France. We are grateful to the Genotoul bioinformatics platform Toulouse Occitanie (Bioinfo Genotoul, https://doi.org/10.15454/1.5572369328961167E12) for providing help and/or computing and/or storage resources.; International audience; Palparine and palparidiine antlions constitute an emblematic clade of large and occasionally colourful insects that are only distributed in the western portion of the Eastern hemisphere, with about half of the known species diversity occurring exclusively in Southern Africa. Little is known about their evolutionary history, and the boundaries and relationships of most genera are still unresolved. In this study, we analyse a molecular dataset consisting of seven loci (five mitochondrial and two nuclear genes) for 144 antlion species and provide the first phylogenetic hypothesis for a representative sampling of Palparini and Palparidiini (62 Palparini species, representing 15 of the 17 known genera, and all three known Palparidiini species). In addition, we reconstruct their timing of diversification and historical biogeography. The resulting tree indicates that several extant palparine genera are polyphyletic or paraphyletic and provides interesting leads that ought to be helpful for future taxonomic revisions; it also enables us to re-evaluate the taxonomic utility and relevancy of a number of morphological characters that were previously used to define some genera. Molecular dating analyses indicate that the most recent common ancestor of both groups originated about 92 million years ago (Ma) in the Late Cretaceous. Finally, the results of historical biogeography analyses provide strong support for an origin in Southern Africa, which further acted as both a cradle of diversification and a springboard for successive waves of northern dispersals.
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- 2023
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10. The evolutionary process of invasion in the fall armyworm (Spodoptera frugiperda)
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Sudeeptha Yainna, Wee Tek Tay, Karine Durand, Estelle Fiteni, Frédérique Hilliou, Fabrice Legeai, Anne-Laure Clamens, Sylvie Gimenez, R. Asokan, C. M. Kalleshwaraswamy, Sharanabasappa S. Deshmukh, Robert L. Meagher, Carlos A. Blanco, Pierre Silvie, Thierry Brévault, Anicet Dassou, Gael J. Kergoat, Thomas Walsh, Karl Gordon, Nicolas Nègre, Emmanuelle d’Alençon, Kiwoong Nam, Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université de Montpellier (UM), Agroécologie et Intensification Durables des cultures annuelles (UPR AIDA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), CSIRO Agriculture and Food (CSIRO), Black Mountain Laboratories, Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO), Institut Sophia Agrobiotech (ISA), Université Nice Sophia Antipolis (1965 - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Côte d'Azur (UCA), Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Université de Rennes (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Rennes Angers, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Indian Institute of Horticultural Research [Bangalore] (ICAR), University of Agricultural and Horticultural Sciences [Shivamogga] (UAHS), USDA-ARS : Agricultural Research Service, USDA Agricultural Research Service [Beltsville, Maryland], Plant Health Institute of Montpellier (UMR PHIM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Ecole Nationale Supérieure des Biosciences et Biotechnologies Appliquées (ENSBBA), Plateforme bioinformatique GenOuest [Rennes], Université de Rennes (UR)-Plateforme Génomique Santé Biogenouest®-Inria Rennes – Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-GESTION DES DONNÉES ET DE LA CONNAISSANCE (IRISA-D7), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), This work (ID 1702-018, given to KN) was publicly funded through ANR (the French National Research Agency) under the 'Investissements d'avenir' programme with the reference ANR-10-LABX-0001 Labex Agro and coordinated by Agropolis Fondation under the frame of I-SITE MUSE (ANR-16-IDEX-0006). In addition, a grant from the department of Sante des Plantes et Environnement at Institut national de la recherche agronomique for KN ( adaptivesv). This work was also financially supported by EUPHRESCO (FAW-spedcom, given to Anne-Nathalie Volkoff) and by CSIRO Health & biosecurity (given to WTT, TW, and KG). SY was supported by a CIRAD-INRAE PhD fellowship. We are grateful to the genotoul bioinformatics platform Toulouse Occitanie (Bioinfo Genotoul, https://doi.org/10.15454/1.557236932896116 7E12) for providing help and/or computing and/or storage resources., ANR-10-LABX-0001,AGRO,Agricultural Sciences for sustainable Development(2010), and ANR-16-IDEX-0006,MUSE,MUSE(2016)
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Multidisciplinary ,MESH: Humans ,MESH: Spodoptera ,MESH: Asia ,MESH: Africa, Western ,Spodoptera frugiperda ,MESH: Animals ,MESH: Africa ,[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM] ,MESH: Phylogeny ,H10 - Ravageurs des plantes - Abstract
The resequencing dataset generated during the current study is available in the NCBI SRA (Accession Number: PRJNA639295).Computer programming scripts used in this study are available on GitHub (https://github.com/kiwoong-nam/FAW_invasion).; International audience; The fall armyworm (FAW; S podoptera frugiperda ) is one of the major agricultural pest insects. FAW is native to the Americas, and its invasion was first reported in West Africa in 2016. Then it quickly spread through Africa, Asia, and Oceania, becoming one of the main threats to corn production. We analyzed whole genome sequences of 177 FAW individuals from 12 locations on four continents to infer evolutionary processes of invasion. Principal component analysis from the TPI gene and whole genome sequences shows that invasive FAW populations originated from the corn strain. Ancestry coefficient and phylogenetic analyses from the nuclear genome indicate that invasive populations are derived from a single ancestry, distinct from native populations, while the mitochondrial phylogenetic tree supports the hypothesis of multiple introductions. Adaptive evolution specific to invasive populations was observed in detoxification, chemosensory, and digestion genes. We concluded that extant invasive FAW populations originated from the corn strain with potential contributions of adaptive evolution.
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- 2022
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11. Host-plant adaptation as a driver of incipient speciation in the fall armyworm ( Spodoptera frugiperda )
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Estelle Fiteni, Karine Durand, Sylvie Gimenez, Robert L. Meagher, Fabrice Legeai, Gael J. Kergoat, Nicolas Nègre, Emmanuelle d’Alençon, Kiwoong Nam, Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université de Montpellier (UM), USDA-ARS : Agricultural Research Service, Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Université de Rennes (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Rennes Angers, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Plateforme bioinformatique GenOuest [Rennes], Université de Rennes (UR)-Plateforme Génomique Santé Biogenouest®-Inria Rennes – Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-GESTION DES DONNÉES ET DE LA CONNAISSANCE (IRISA-D7), Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT), BioInformatics Platform for Agroecosystems Arthropods, Université de Rennes (UR), Scalable, Optimized and Parallel Algorithms for Genomics (GenScale), Inria Rennes – Bretagne Atlantique, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), This work (ID 1702-018) was publicly funded through ANR (the French National Research Agency) under the 'Investissements d'avenir' programme with the reference ANR-10-LABX-0001 Labex Agro and coordinated by Agropolis Fondation under the frame of I-SITE MUSE (ANR-16-IDEX-0006). In addition, the study is supported by Agence Nationale De La Recherche (ORIGINS, ANR-20-CE92-0018) and by department of Sante des Plantes et Environnement at Institut national de recherche pour l'agriculture, l'alimentation et l'environnement (NewHost)., ANR-10-LABX-0001,AGRO,Agricultural Sciences for sustainable Development(2010), ANR-16-IDEX-0006,MUSE,MUSE(2016), and ANR-20-CE92-0018,ORIGINS,A l'origine de la divergence : les barrières conduisant à l'isolement reproducteur pré- et post-zygotique chez Spodoptera frugiperda(2020)
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Gene Flow ,Reproductive Isolation ,speciation with gene flow ,Oryza ,Spodoptera frugiperda ,General Medicine ,incipient speciation ,Spodoptera ,Zea mays ,fall armyworm ,Humans ,Animals ,host-plant adaptation ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
Background Divergent selection on host-plants is one of the main evolutionary forces driving ecological speciation in phytophagous insects. The ecological speciation might be challenging in the presence of gene flow and assortative mating because the direction of divergence is not necessarily the same between ecological selection (through host-plant adaptation) and assortative mating. The fall armyworm (FAW), a major lepidopteran pest species, is composed of two sympatric strains, corn and rice strains, named after two of their preferred host-plants. These two strains have been hypothesized to undergo incipient speciation, based on (i) several lines of evidence encompassing both pre- and post-zygotic reproductive isolation, and (ii) the presence of a substantial level of genetic differentiation. Even though the status of these two strains has been established a long time ago, it is still yet to be found whether these two strains indeed exhibit a marked level of genetic differentiation from a large number of genomic loci. Here, we analyzed whole genome sequences from 56 FAW individuals either collected from pasture grasses (a part of the favored host range of the rice strain) or corn to assess the role of host-plant adaptation in incipient speciation. Results Principal component analysis of whole genome data shows that the pattern of divergence in the fall armyworm is predominantly explained by the genetic differentiation associated with host-plants. The level of genetic differentiation between corn and rice strains is particularly marked in the Z chromosome. We identified one autosomal locus and two Z chromosome loci targeted by selective sweeps specific to rice strain and corn strain, respectively. The autosomal locus has both increased DXY and FST while the Z chromosome loci had decreased DXY and increased FST. Conclusion These results show that the FAW population structure is dominated by the genetic differentiation between corn and rice strains. This differentiation involves divergent selection targeting at least three loci, which include a locus potentially causing reproductive isolation. Taken together, these results suggest the evolutionary scenario that host-plant speciation is a driver of incipient speciation in the fall armyworm.
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- 2022
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12. Changes in Diversification Patterns and Signatures of Selection during the Evolution of Murinae-Associated Hantaviruses
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Guillaume Castel, Maria Razzauti, Emmanuelle Jousselin, Gael J. Kergoat, and Jean-François Cosson
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diversification rate ,Hantavirus ,molecular evolution ,Murinae ,phylogenetics ,selection ,Microbiology ,QR1-502 - Abstract
In the last 50 years, hantaviruses have significantly affected public health worldwide, but the exact extent of the distribution of hantavirus diseases, species and lineages and the risk of their emergence into new geographic areas are still poorly known. In particular, the determinants of molecular evolution of hantaviruses circulating in different geographical areas or different host species are poorly documented. Yet, this understanding is essential for the establishment of more accurate scenarios of hantavirus emergence under different climatic and environmental constraints. In this study, we focused on Murinae-associated hantaviruses (mainly Seoul Dobrava and Hantaan virus) using sequences available in GenBank and conducted several complementary phylogenetic inferences. We sought for signatures of selection and changes in patterns and rates of diversification in order to characterize hantaviruses’ molecular evolution at different geographical scales (global and local). We then investigated whether these events were localized in particular geographic areas. Our phylogenetic analyses supported the assumption that RNA virus molecular variations were under strong evolutionary constraints and revealed changes in patterns of diversification during the evolutionary history of hantaviruses. These analyses provide new knowledge on the molecular evolution of hantaviruses at different scales of time and space.
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- 2014
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13. Genome-wide macroevolutionary signatures of key innovations in butterflies colonizing new host plants
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Fabien L. Condamine, Rémi Allio, Adam M. Cotton, Guillaume Chomicki, Benoit Nabholz, Gael J. Kergoat, Felix A. H. Sperling, Anne-Laure Clamens, Stefan Wanke, Oscar Alejandro Pérez-Escobar, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Technische Universität Dresden = Dresden University of Technology (TU Dresden), Institut für Botanik [Dresden], Durham University, Royal Botanic Gardens [Kew], Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), University of Alberta, This project has received funding from the Marie Curie International Outgoing Fellow under the European Union's Seventh Framework Programme (project BIOMME, agreement no. 627684), a PICS grant from the CNRS (project PASTA), an 'Investissement d'Avenir' grant from the Agence Nationale de la Recherche (project CASMA, CEBA, ref. ANR-10-LABX-0025) and the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (project GAIA, agreement no. 851188) to F.L.C., a Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery Grant (RGPIN-2018-04920) to F.A.H.S., and a German Research Foundation grant (WA 2461/9-1) to S.W., ANR-10-LABX-0025,CEBA,CEnter of the study of Biodiversity in Amazonia(2010), European Project: 627684,EC:FP7:PEOPLE,FP7-PEOPLE-2013-IOF,BIOMME(2015), European Project: 851188,GAIA, École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, Duke University [Durham], Royal Botanic Gardens, Kew, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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0106 biological sciences ,0301 basic medicine ,Time Factors ,[SDV]Life Sciences [q-bio] ,Science ,Genome, Insect ,General Physics and Astronomy ,Diversification (marketing strategy) ,Biology ,Evolutionary ecology ,010603 evolutionary biology ,01 natural sciences ,Genome ,Article ,General Biochemistry, Genetics and Molecular Biology ,Beringia ,Host-Parasite Interactions ,Evolution, Molecular ,03 medical and health sciences ,Species Specificity ,Phylogenetics ,Molecular evolution ,Genetic algorithm ,Animals ,Host plants ,Ecosystem ,Phylogeny ,030304 developmental biology ,0303 health sciences ,Multidisciplinary ,Geography ,fungi ,food and beverages ,Biodiversity ,General Chemistry ,Plants ,15. Life on land ,030104 developmental biology ,Biogeography ,Evolutionary biology ,Adaptation ,Butterflies ,Genome-Wide Association Study - Abstract
The mega-diversity of herbivorous insects is attributed to their co-evolutionary associations with plants. Despite abundant studies on insect-plant interactions, we do not know whether host-plant shifts have impacted both genomic adaptation and species diversification over geological times. We show that the antagonistic insect-plant interaction between swallowtail butterflies and the highly toxic birthworts began 55 million years ago in Beringia, followed by several major ancient host-plant shifts. This evolutionary framework provides a valuable opportunity for repeated tests of genomic signatures of macroevolutionary changes and estimation of diversification rates across their phylogeny. We find that host-plant shifts in butterflies are associated with both genome-wide adaptive molecular evolution (more genes under positive selection) and repeated bursts of speciation rates, contributing to an increase in global diversification through time. Our study links ecological changes, genome-wide adaptations and macroevolutionary consequences, lending support to the importance of ecological interactions as evolutionary drivers over long time periods., Arms races between herbivores and plants have likely affected their evolutionary histories, which could have led to their high diversity. Allio et al. find that butterflies shifting to new host plants have more adaptive molecular signatures across their genomes and show repeated bursts of speciation rates.
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- 2021
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14. Ebenacobius Haran, a new southern African genus of flower weevils (Coleoptera: Curculioninae: Derelomini) associated with dicotyledonous plants
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Julien Haran, Laure Benoit, Şerban Procheş, Gael J. Kergoat, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), and University of KwaZulu-Natal [Durban, Afrique du Sud] (UKZN)
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Phylogénie ,Insecta ,A04E1722-994A-44AD-8FD2-28DC0F220805 2 urn:lsid:zoobank.org:author:61963F74-724B-4174-9E9A-8817A3516B0E 3 urn:lsid:zoobank.org:author:0ACCE987-9774-453B-A1BA-42E93D75D3C7 4 urn:lsid:zoobank.org:author:D763F7EC-A1C9-45FF-88FB-408E3953F9A8 Afrotropics ,Arthropoda ,mutualism ,[SDV]Life Sciences [q-bio] ,Relation plante animal ,Relation hôte pathogène ,molecular phylogenetics ,Curculionidae ,ddc:590 ,Animalia ,Ecology, Evolution, Behavior and Systematics ,A04E1722-994A-44AD-8FD2-28DC0F220805 2 urn:lsid:zoobank.org:author:61963F74-724B-4174-9E9A-8817A3516B0E 3 urn:lsid:zoobank.org:author:0ACCE987-9774-453B-A1BA-42E93D75D3C7 4 urn:lsid:zoobank.org:author:D763F7EC-A1C9-45FF-88FB-408E3953F9A8 Afrotropics Barcoding Ebenaceae molecular phylogenetics mutualism new weevil species plant-weevil interactions ,Taxonomy ,Barcoding ,new weevil species ,plant-weevil interactions ,afrotropics ,L60 - Taxonomie et géographie animales ,Biodiversity ,H10 - Ravageurs des plantes ,Coleoptera ,Ebenaceae - Abstract
We thank the Western Cape Nature Conservation Board (Permit No. CN44-30-4229), the Cape Research Centre, South African National Parks (Permit No. CRC/2019-2020/012–2012/V1) and Ezemvelo KZN Wildlife permits office, KwaZulu-Natal (Collecting Permit KZN: OP1382-2019) for authorization to collect specimens.; International audience; A new genus of derelomine flower weevil (Curculionidae: Derelomini sensu Franz 2006), Ebenacobius Haran gen. nov., is described to accommodate a clade of species morphologically and phylogenetically distinct from other genera in this tribe. This genus can be diagnosed as follows: protibiae armed with an apical mucro, claws free, eye convexity exceeding the contour of head in dorsal view and forehead with a median furrow. In total, 19 species are recognized in this genus; 14 species are described as new (E. curvisetis Haran gen. et sp. nov.; E. duplicatus Haran gen. et sp. nov.; E. grobbelaarae Haran gen. et sp. nov.; E. hessei Haran gen. et sp. nov.; E. hippopotamorum Haran gen. et sp. nov.; E. kuscheli Haran gen. et sp. nov.; E. mulanjensis Haran gen. et sp. nov.; E. oberprieleri Haran gen. et sp. nov.; E. rectirostris Haran gen. et sp. nov.; E. san Haran gen. et sp. nov.; E. pedi Haran gen. et sp. nov.; E. thoracicus Haran gen. et sp. nov.; E. tsonga Haran gen. et sp. nov. and E. xhosa Haran gen. et sp. nov.), five species of Derelomus Schoenherr (D. atratus Hesse; D. costalis Fåhraeus; D. incognitus Hesse; D. rhodesianus Hesse; D. turneri Marshall) are hereby transferred to Ebenacobius gen. nov. and one species name is placed in synonymy (Derelomus rugosicollis Hesse, 1929 = Derelomus costalis Fåhraeus, 1844 syn. nov.). Members of Ebenacobius gen. nov. seem to develop in inflorescences of dicot plants, with larval stages of at least two species recovered from the flowers of Euclea species (Ebenaceae). A key to the continental African genera of Derelomini and to species of Ebenacobius gen. nov. is provided. Pictures of habitus and terminalia of adults, along with distribution and life history data are also provided for each species.
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- 2022
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15. Révision du genre Poeonoma Tams & Bowden (Lepidoptera : Noctuidae : Apameiini : Sesamiina) avec la description d’un nouveau genre et de deux nouvelles espèces de Sesamiina de la région afrotropicale
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Claire Capdevielle-Dulac, Boaz K. Musyoka, Philippe Le Gall, Onésime Mubenga Kandonda, Bruno Le Ru, Grégoire Bani, Richard Molo, George Ong’amo, Gael J. Kergoat, Rose Ndemah, International Centre of Insect Physiology and Ecology (ICIPE), ICIPE, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Université Paris-Saclay, International Institute of Tropical Agriculture [Nigeria] (IITA), Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Université de Kisangani, Centre de recherches agronomiques de Loudima (CRAL), Namulonge Agricultural and Animal Production Research Institute (NAARI), University of Nairobi (UoN), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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0106 biological sciences ,0303 health sciences ,biology ,[SDV]Life Sciences [q-bio] ,Apameini ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,host-plants ,molecular phylogenetics ,Lepidoptera genitalia ,taxonomy ,03 medical and health sciences ,Bioregion ,Poeonoma ,Insect Science ,morphology ,Botany ,Molecular phylogenetics ,Noctuidae ,Host plants ,Taxonomy (biology) ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
The genus Poeonoma (Tams & Bowden, 1953) is revised to include two species P. serrata (Hampson, 1910) and P. ugandensis Le Run. sp., from the Congolian bioregion. Several new synonyms are introduced for Poeonoma serrata: Conicofrontia sjoestedti (Aurivillius, 1925) n. syn. for Poeonoma serrata (Hampson, 1910), Poeonoma similis (Tams & Bowden, 1953) n. syn. for Poeonoma serrata (Hampson, 1910), and Poeonoma nigribasis (Laporte, 1974) n. syn. for Poeonoma serrata (Hampson, 1910). A new genus, Nyaluteme Le Run. gen., is proposed for two species formerly included in Poeonoma, N. acantha (Tams & Bowden, 1953) n. comb. and N. inermis (Laporte, 1973) n. comb., and N. nigra Le Run. sp., described from the Congolian bioregion. Host-plants for three of the species are recorded:Pennisetum purpureum Schumach. for P. serrata and P. ugandensis, and Miscanthus violaceus (K. Schum) Pilg. for N. nigra. A key to species, descriptions, illustrations of adults and genitalia, and distribution maps are included. Results of previously published phylogenetic analyses also allow the status of the new genus to be confirmed and to infer the phylogenetic placement of the two genera.; Le genre Poeonoma (Tams & Bowden, 1953) est révisé ; deux espèces, P. serrata (Hampson, 1910) et P. ugandensis Le Ru n. sp., de la biorégion Congolaise, y sont incluses et plusieurs nouvelles synonymies sont proposées pour Poeonoma serrata : Conicofrontia sjoestedti (Aurivillius, 1925) n. syn. de Poeonoma serrata (Hampson, 1910), Poeonoma similis (Tams & Bowden, 1953) n. syn. de Poeonoma serrata (Hampson, 1910), et Poeonoma nigribasis (Laporte, 1974) n. syn. de Poeonoma serrata (Hampson, 1910). Un nouveau genre, Nyaluteme Le Ru n. gen., de la biorégion Congolaise, est proposé pour deux espèces précédemment décrites dans le genre Poeonoma, N. acantha (Tams & Bowden, 1953) n. comb., et N. inermis (Laporte, 1973) n. comb., et une espèce nouvellement décrite N. nigra Le Ru n. sp. Les plantes-hôtes de trois espèces sont répertoriées : Pennisetum purpureum Schumach. pour P. serrata et P. ugandensis, et Miscanthus violaceus (K. Schum) Pilg. pour N. nigra. Une clé de détermination des espèces est présentée ainsi que l’illustration des adultes et des génitalia et, des cartes de distribution. Les résultats d’analyses de reconstruction phylogénétique déjà publiées permettent également de confirmer le statut du nouveau genre et d’inférer la position phylogénétique des deux genres. http://www.zoobank.org/urn:lsid:zoobank.org:pub:6ED4AC9E-043C-4A04-A92D-807066943002
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- 2020
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16. Transcriptional differences between the two host strains of Spodoptera frugiperda (Lepidoptera: Noctuidae)
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Marion Orsucci, Yves Moné, Philippe Audiot, Sylvie Gimenez, Sandra Nhim, Rima Naït-Saïdi, Marie Frayssinet, Guillaume Dumont, Jean-Paul Boudon, Marin Vabre, Stéphanie Rialle, Rachid Koual, Gael J. Kergoat, Rodney N. Nagoshi, Robert L. Meagher, Emmanuelle d’Alençon, Nicolas Nègre, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université de Montpellier (UM), Plant Biology, Linnean Centre for Plant Biology, Uppsala BioCentre, Swedish University of Agricultural Sciences (SLU), Drexel University College of Medicine, DIASCOPE, Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut de Génomique Fonctionnelle - Montpellier GenomiX (IGF MGX), Institut de Génomique Fonctionnelle (IGF), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-BioCampus (BCM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), USDA/ARS, and USDA-ARS : Agricultural Research Service
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[SDV]Life Sciences [q-bio] - Abstract
International audience; Spodoptera frugiperda, the fall armyworm (FAW), is an important agricultural pest in the Americas and an emerging pest in sub-Saharan Africa, India, East-Asia and Australia, causing damage to major crops such as corn, sorghum and soybean. While FAW larvae are considered polyphagous, differences in diet preference have been described between two genetic variants: the corn strain (sf-C) and the rice strain (sf-R). These two strains are sometimes considered as distinct species, raising the hypothesis that host plant specialization might have driven their divergence. To test this hypothesis, we first performed controlled reciprocal transplant (RT) experiments to address the impact of plant diet on several traits linked to the fitness of the sf-C and sf-R strains. The phenotypical data suggest that sf-C is specialized to corn. We then used RNA-Se to identify constitutive transcriptional differences between strains, regardless of diet, in laboratory as well as in natural populations. We found that variations in mitochondrial transcription levels are among the most substantial and consistent differences between the two strains. Since mitochondrial genotypes also vary between the strains, we believe the mitochondria may have a significant role in driving strain divergence.
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- 2022
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17. Relict lineages with extreme ecology and physiology: metal hyperaccumulation on ultramafic substrates in New Caledonian Alseuosmineae (Asterales)
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Karine Gotty, Gael J. Kergoat, Pierre Jouannais, Vanessa Invernon, Sylvain Merlot, Yohan Pillon, Laboratoire des symbioses tropicales et méditerranéennes (UMR LSTM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier, Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), This work was supported by the CNRS MITI X-Life program (X-TreM project to SM, and Centre National de la Recherche Scientifique).
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Ecology ,island biogeography ,[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] ,Australia ,serpentine ,Plant Science ,molecular dating ,Ecology, Evolution, Behavior and Systematics ,refugium - Abstract
Early access; International audience; BackgroundRelict lineages are an important component of the biodiversity, but it is unclear under what circumstances these groups persist. A potential example of such a group is the Alseuosmineae (Asterales) of Oceania. This clade contains the three small families-Alseuosmiaceae, Argophyllaceae and Phellinaceae. The clade has highest diversity in New Caledonia, where there are extensive ultramafic substrates, creating an extreme edaphic environment.AimsUsing several lines of evidence we aimed to show that Alseuosmineae qualify as a relict lineage, with specialized adaptations for ultramafic substrates.MethodsMolecular phylogenetics and dating analyses were carried out on representatives from all Alseuosmineae genera. Metal concentration in 33 out of 44 Alseuosmineae species was measured in herbarium specimens with XRF spectrometry.ResultsDating analyses indicated that Alseuosmineae began diversifying about 75-80 million years ago, and had much slower net diversification rates than other Asterales groups. One-third of the species occur on ultramafic substrates in New Caledonia. Six are categorised as nickel hyperaccumulators, and two as manganese hyperaccumulators.ConclusionsExtinction was probably paramount in the history of Alseuosmineae, especially for continental species. We postulate that their adaptation to ultramafic substrates and metal accumulation may have contributed to their survival until today.
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- 2022
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18. The origin of an extreme case of sister‐species sympatry in a palm‐pollinator mutualistic system
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Gael J. Kergoat, Laurence Beaudoin-Ollivier, Laure Benoit, Julien Haran, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Agrosystèmes Biodiversifiés (UMR ABSys), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST)
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0106 biological sciences ,Sympatry ,F40 - Écologie végétale ,mutualism ,[SDV]Life Sciences [q-bio] ,Relation plante animal ,Sister ,Biology ,010603 evolutionary biology ,01 natural sciences ,sympatry ,03 medical and health sciences ,Pollinator ,Elaeis guineensis ,Elaeidobius ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Mutualism (biology) ,0303 health sciences ,Ecology ,climatic oscillations ,15. Life on land ,Cameroon Volcanic Line ,Dahomey Gap ,L20 - Écologie animale ,Mutualisme ,Palm ,plant-pollinator interactions - Abstract
International audience; Aim: Mutualistic systems involving plants and brood pollinators show intriguing cases where a single plant is pollinated by several closely related sympatric species. This study aims at identifying the mechanisms involved in such an extreme case, where 10 sympatric weevil species are only associated with African oil palm inflorescences. We assessed the patterns and timing of speciation of this peculiar assemblage to explore the main drivers of its diversification.Location: Tropical Africa.Taxon: The African oil palm Elaeis guineensis Jacquin (Arecaceae, Cocoseae), weevil genera Elaeidobius Kuschel and Prosoestus Faust (Curculionidae, Derelomini).Methods: We first reassessed the status of the weevil species assemblage associated with the African oil palm based on a range of molecular species delimitation analyses. Second, we reconstructed a dated molecular phylogeny using Bayesian inference and maximum likelihood and carried out historical biogeographical analyses accounting for the main biogeographical barriers in tropical Africa.Results: Our analyses generally confirm the validity of the species associated with the African oil palm and indicate that they form a monophyletic group. Dating analyses indicate that they originated about 7-8 million years ago (Mya) and that most speciation events occurred during the Pliocene and Pleistocene. Historical biogeography analyses reveal that one geographical barrier played a bigger role during their diversification. Age estimates suggest that extant weevil species remained in sympatry along the range of their host during the last 0.2 Mya.Main conclusions: This case represents a remarkable example of a speciose mutualistic monophyletic insect assemblage. Our results indicate that past climatic oscillations in Western and Central Africa - where cycles of range contractions and expansions of the host drove the divergence of the weevils in allopatry - and the predominant role of a mountain range were instrumental in the emergence of the sympatric assemblage.
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- 2021
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19. Antarctica as an evolutionary arena during the Cenozoic global cooling
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Gael J. Kergoat, Fabien L. Condamine, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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0106 biological sciences ,Polar front ,0303 health sciences ,Multidisciplinary ,Ecology ,Biodiversity ,Species diversity ,[SDV.BID]Life Sciences [q-bio]/Biodiversity ,15. Life on land ,010603 evolutionary biology ,01 natural sciences ,Fellfield ,Tundra ,03 medical and health sciences ,Geography ,13. Climate action ,Commentary ,14. Life underwater ,Species richness ,Cenozoic ,Global cooling ,030304 developmental biology - Abstract
It is striking to observe that species richness is not evenly distributed across the surface of the planet. Current species diversity indeed decreases toward the poles, with Antarctica for instance being depauperate compared to tropical regions. This ubiquitous pattern has long attracted the attention of naturalists and more recently of evolutionary biologists and paleontologists to understand why species diversity peaks at the equator. However, it remains poorly understood how polar biodiversity originated and diversified. Antarctica is currently defined as three large biogeographic regions: the Maritime Antarctic, the sub-Antarctic, and the Continental Antarctic. The Maritime Antarctic region is largely separated from the rest of the world’s oceans due to the Antarctic Circumpolar Current (ACC), differences in temperature along the Antarctic Polar Front (APF), and the presence of a deep sea surrounding the Antarctic shelf (1). The sub-Antarctic region consists of dozens of islands contained within the APF, generally characterized by the presence of tundra (absent from the Continental Antarctic) and fellfield habitats. As for the Continental Antarctic region, it is mostly uninhabitable, with less than 0.5% of its surface being ice-free. A long-standing idea is that biodiversity in Antarctica is low, and only constituted of old and poorly diversified lineages. In PNAS, a study (2)—relying on both microevolutionary and macroevolutionary approaches—challenges this idea and shows that terrestrial life can thrive there. Our understanding of the origin and evolution of Antarctic biodiversity has greatly improved in recent years, thanks in part to studies revealing high levels of cryptic diversity, especially for marine organisms for which species diversity is often underestimated (3). Several molecular studies also show evidence for recent colonization and high in situ diversification, thus challenging the view that Antarctica is an inhospitable frozen region where groups cannot adapt, thrive, and successfully diversify (1). Interestingly, elevated speciation rates have been recovered … [↵][1]1To whom correspondence may be addressed. Email: fabien.condamine{at}gmail.com. [1]: #xref-corresp-1-1
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- 2021
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20. Phylogeny and divergence dating of the ladybird beetle tribe Coccinellini Latreille (Coleoptera: Coccinellidae: Coccinellinae)
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Lúcia Massutti de Almeida, Karen Salazar, Gael J. Kergoat, Romain Nattier, Alexandra Magro, Alice Michel-Salzat, Pascaline Chifflet‐Belle, Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Universidade Federal do Parana [Curitiba] (UFPR), Universidade Federal do Paraná (UFPR), Laboratório de Sistemática e Bioecologia de Coleoptera, Departamento de Zoologia, Evolution et Diversité Biologique (EDB), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), The financial support in the doctoral studies to Karen Salazar was provided by the government agency Colciencias-Colombia (program number 756-2016). Alexandra Magro was supported by the ‘Laboratoires d’Excellence’ LabEx TULIP (ANR-10-LABX-0041) and CEBA (ANR-10-LABX-0025), and Lucia M. Almeida by CNPq.(308992/2017-2)., ANR-10-LABX-0041,TULIP,Towards a Unified theory of biotic Interactions: the roLe of environmental(2010), and ANR-10-LABX-0025,CEBA,CEnter of the study of Biodiversity in Amazonia(2010)
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0106 biological sciences ,0303 health sciences ,biology ,[SDV]Life Sciences [q-bio] ,Tribe (biology) ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Divergence ,03 medical and health sciences ,Coccinellini ,Coccinellinae ,Phylogenetics ,Evolutionary biology ,Insect Science ,Coccinellidae ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
International audience; We reconstruct a comprehensively sampled molecular phylogeny for the second most species-rich tribe of the ladybird beetle family Coccinellidae, the charismatic Coccinellini. We analysed a dataset consisting of five nuclear and three mitochondrial gene fragments from 150 taxa to provide a detailed phylogeny and estimates of historical divergence times using Bayesian relaxed clocks and primary fossil calibrations and an assessment of the evolution of feeding habits. The results of phylogenetic analyses provide strong support for the monophyly of the tribe Coccinellini, highlight the existence of four major clades and most sampled Coccinellini genera (30 out of 34) were recovered monophyletic. Our dating analyses suggest an Early Cretaceous origin for Coccinellidae at ca. 140 millions years ago (Ma) and a Late Cretaceous origin for the tribe Coccinellini at ca. 83.8 Ma. Ancestral character state estimation of feeding habits highlights a high level of phylogenetic niche conservatism on aphids and indicates that the most common recent ancestor of Coccinellini likely also fed on aphids. Our reconstruction of feeding habits and assessment of the aphid fossil record suggests that the diversification of Coccinellini paralleled that of Aphididae, although with substantial variation in host-breadth and the tendency for a few specialized lineages towards non-aphid feeding.
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- 2021
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21. Updated phylogenetic and systematics of the Acrapex albivena Hampson, 1910 and A. stygiata (Hampson, 1910) species groups (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina), with the description of nine new species from the Afrotropics
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Muluken Goftishu, Bruno Le Ru, Yoseph Assefa, Claire Capdevielle-Dulac, George Ong’amo, D. E. Conlong, Gael J. Kergoat, Gilson Chipabika, Beatrice Pallangyo, Jérôme Barbut, Boaz K. Musyoka, Mohamedi Njaku, International Centre of Insect Physiology and Ecology (ICIPE), Université Paris-Sud - Paris 11 (UP11), UMR 247, Institut de Recherche pour le Développement (IRD [France-Ouest]), Biocontrol Programme, School of Plant Sciences, University of Arizona, University of Swaziland, Zambia Agriculture Research Institute, Partenaires INRAE, University of KwaZulu-Natal (UKZN), South African Sugarcane Research Institute, University of Nairobi (UoN), Département Systématique et Évolution, Muséum national d'Histoire naturelle (MNHN), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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0106 biological sciences ,Systematics ,Acrapex ,Zoology ,Biology ,Apameini ,010603 evolutionary biology ,01 natural sciences ,molecular phylogenetics ,Lepidoptera genitalia ,taxonomy ,03 medical and health sciences ,systematics ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0303 health sciences ,Phylogenetic tree ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,biology.organism_classification ,Noctuinae ,host plants ,Insect Science ,Molecular phylogenetics ,Noctuidae ,Taxonomy (biology) ,Afrotropics - Abstract
International audience; The genus Acrapex Hampson, 1891 (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina) constitutes a speciose group of noctuid stemborers mostly distributed in the Afrotropics. In this study nine new Acrapex species are described: Acrapex abyssinica n. sp., Acrapex dabaga n. sp., Acrapex jansei n. sp., Acrapex kifanya n. sp., Acrapex lusinga n. sp., Acrapex ngwenya n. sp., Acrapex njombea n. sp., Acrapex vetiveria n. sp. and Acrapex zima n. sp. All species are assigned to the A. albivena group with the exception of A. lusinga which is assigned to the A. stygiata group. We also provide supplemental descriptions for two previously described species of the A. albivena group, A. punctosa Berio, 1973 and A. sysciodes Berio, 1973, and for one species belonging to the A. stygiata group: A. brunneella Le Ru, 2014. Host plants of three species are recorded; A. brunneella and Acrapex jansei were reared on Cymbopogon pospischilii (K.Schum.) C.E.Hubb and A. vetiveria on Chrysopogon zizanioides (L.). We also conducted molecular phylogenetic analyses (using both Bayesian inference and maximum likelihood) on a multi-marker (four mitochondrial and two nuclear genes) molecular dataset encompassing 138 specimens (including 98 specimens from the A. albivena group and 23 specimens from the A. stygiata group) from 48 stemborer species. The results of the corresponding analyses support the monophyly of the two groups of interest and the species status of all newly described taxa, except for A. lusinga that was not sequenced. The phylogenetic analyses also unravel several evolutionary lineages whose precise status is pending because their DNA was extracted from larval stages.; Actualisation des connaissances de la phylogénie et de la systématique des groupes d’espèces Acrapex albivena Hampson, 1910 et A. stygiata (Hampson, 1910) (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina), avec la description de neuf nouvelles espèces de la région Afrotropicale. Le genre Acrapex Hampson, 1891 (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina) est un groupe diversifié de noctuelles foreuses, majoritairement distribué dans la région Afrotropicale. Dans cette étude neuf espèces nouvelles sont décrites : Acrapex abyssinica n. sp., Acrapex dabaga n. sp., Acrapex jansei n. sp., Acrapex kifanya n. sp., A. lusinga n. sp., Acrapex ngwenya n. sp., Acrapex njombea n. sp., Acrapex vetiveria n. sp. et Acrapex zima n. sp. Toutes ces espèces sont assignées au groupe d’espèce A. albivena à l’exception d’A. lusinga qui est assignée au groupe d’espèce A. stygiata. Nous fournissons également des descriptions supplémentaires pour deux espèces, A. punctosa Berio, 1973 et A. sysciodes, Berio 1973, précedemment décrites dans le groupe A. albivena ainsi que pour A. brunneella Le Ru, 2014, une espèce qui appartient au groupe A. stygiata. Les plantes-hôtes de trois espèces sont répertoriées ; Acrapex brunneella et A. jansei ont été élevées sur Cymbopogon pospischilii (K. Schum.) C. E. Hubb et A. vetiveria sur Chrysopogon zizanioides (L.). Nous avons également réalisé des analyses de reconstruction phylogénétique (utilisant à la fois l’inférence Bayésienne et le maximum de vraisemblance) sur un jeu de données moléculaires multi-marqueurs (quatre gènes mitochondriaux et deux gènes nucléaires) comprenant 138 specimens (incluant 98 specimens du groupe A. albivena et 23 specimens du groupe A. stygiata) de 48 espèces de foreurs. Les résultats de ces analyses soutiennent à la fois l’hypothèse de monophylie des deux groupes d’intérêt et le statut d’espèces des taxa nouvellement décris, à l’exception d’A. lusinga qui n’a pas été séquencé. Les analyses phylogénétiques révèlent également l’existence de plusieurs lignées évolutives distinctes dont le statut reste à définir car leur ADN a été extrait de stades larvaires
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- 2019
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22. Genetic data from the extinct giant rat from Tenerife (Canary Islands) points to a recent divergence from mainland relatives
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Pere Renom, Toni de-Dios, Sergi Civit, Laia Llovera, Alejandro Sánchez-Gracia, Esther Lizano, Juan Carlos Rando, Tomàs Marquès-Bonet, Gael J. Kergoat, Isaac Casanovas-Vilar, Carles Lalueza-Fox, Max Planck Society, Ministerio de Ciencia, Innovación y Universidades (España), German Research Foundation, Comunidad de Madrid, National Science Foundation (US), Ministerio de Economía y Competitividad (España), Institut de Biologia Evolutiva [Barcelona] (IBE / UPF - CSIC), Universitat Pompeu Fabra [Barcelona] (UPF), Institute of Genomics [Tartu, Estonia], University of Tartu, Institut de Recerca de la Biodiversitat - Biodiversity Research Institute [Barcelona, Spain] (IRBio UB), Universitat de Barcelona (UB), Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona (UAB), Universidad de La Laguna [Tenerife - SP] (ULL), Departamento de Biología Animal, Edafología y Geología, Institució Catalana de Recerca i Estudis Avançats (ICREA), Centre for Genomic Regulation [Barcelona] (CRG), Universitat Pompeu Fabra [Barcelona] (UPF)-Centro Nacional de Analisis Genomico [Barcelona] (CNAG), Barcelona Institute of Science and Technology (BIST), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), C.L.-F. is supported by a PGC2018-0955931-B-100 grant (MCIU/AEI/FEDER, UE) of Spain, T.M.-B. is supported by funding from the European Research Council (ERC) (grant agreement no. 864203), BFU2017-86471-P (MINECO/FEDER, UE), ‘Unidad de Excelencia María de Maeztu’, funded by the AEI (CEX2018-000792-M), Howard Hughes International Early Career and Generalitat de Catalunya (CERCA Programme and 2017 SGR 880), and I.C.-V. is supported by grant nos. I+D+i PID2020-117289GBI00 funded by MCIN/AEI/10.13039/501100011033/, the MINECO (RYC-2013-12470) and the Generalitat de Catalunya (CERCA Programme and 2017 SGR 116).
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0106 biological sciences ,[SDV]Life Sciences [q-bio] ,ADN ,Pes corporal ,Molecular phylogeny ,insular evolution ,010603 evolutionary biology ,01 natural sciences ,Rodents ,Gigantism ,Filogènia ,Evolution (Biology) ,03 medical and health sciences ,Animals ,gigantism ,ancient DNA ,Research Articles ,Phylogeny ,molecular phylogeny ,030304 developmental biology ,Islands ,0303 health sciences ,Evolutionary Biology ,Ancient DNA ,DNA ,Body weight ,Agricultural and Biological Sciences (miscellaneous) ,Rosegadors ,body mass ,Rats ,Insular evolution ,Body mass ,Spain ,rodents ,General Agricultural and Biological Sciences ,Evolució (Biologia) - Abstract
Evolution of vertebrate endemics in oceanic islands follows a predictable pattern, known as the island rule, according to which gigantism arises in originally small-sized species and dwarfism in large ones. Species of extinct insular giant rodents are known from all over the world. In the Canary Islands, two examples of giant rats, †Canariomys bravoi and †Canariomys tamarani, endemic to Tenerife and Gran Canaria, respectively, disappeared soon after human settlement. The highly derived morphological features of these insular endemic rodents hamper the reconstruction of their evolutionary histories. We have retrieved partial nuclear and mitochondrial data from †C. bravoi and used this information to explore its evolutionary affinities. The resulting dated phylogeny confidently places †C. bravoi within the African grass rat clade (Arvicanthis niloticus). The estimated divergence time, 650 000 years ago (95% higher posterior densities: 373 000-944 000), points toward an island colonization during the Günz-Mindel interglacial stage. †Canariomys bravoi ancestors would have reached the island via passive rafting and then underwent a yearly increase of mean body mass calculated between 0.0015 g and 0.0023 g; this corresponds to fast evolutionary rates (in darwins (d), ranging from 7.09 d to 2.78 d) that are well above those observed for non-insular mammals., For technical support, we thank the research service facilities of IJC and IGTP, the Crystallization Facility of the Max Planck Institute of Biochemistry, the ICTS NMR facility from the Scientific and Technological Centres of the University of Barcelona and Biophysics Core Facility of BMC-LMU. I.G. was a fellow of the Marie Skłodowska Curie Training network ‘ChroMe’ (H2020-MSCA-ITN-2015-675610, awarded to M.B. and A.G.L.). The project was further supported by national grants (nos. RTI2018-094005-B-I00 and BFU2015-66559-P from FEDER/Ministerio de Ciencia e Innovación—Agencia Estatal de Investigación to M.B.). Research in the participating labs was further supported by the following grants: the Marie Skłodowska Curie Training network ‘INTERCEPT-MDS’ no. H2020-MSCA-ITN-2020-953407 (to M.B.), MINECO-ISCIII no. PIE16/00011 (to M.B.); the Deutsche José Carreras Leukämie Stiftung DJCLS (no. 14R/2018 to M.B.), AGAUR (no. 2017-SGR-305 to M.B.), Fundació La Marató de TV3 (no. 257/C/2019 to M.B.), German Research Foundation Project (ID 213249687—SFB 1064 and Project ID 325871075—SFB 1309 to A.G.L.), the Spanish Ministry of Science (PID2019-110183RB-C21 to A.R.M.), Community of Madrid (P2018/BAA-4343-ALIBIRD2020-CM to A.R.M), Ramón Areces Foundation (to A.R.M.), National Science Foundation (EF-1921402 to J.M.E.L.), 2015 International Doctoral Fellowship La Caixa-Severo Ochoa (to M.F.V.), Marie Skłodowska-Curie Individual Fellowship (no. 747789 to M.M.L.), Juan de la Cierva-Incorporación (IJC2018-036657-I to M.M.L., ERC-2012-CoG-616960 to I.R.T.), MINECO (BFU2017-90114-P to I.R.T.), AGAUR (2017-SGR-324 to X.S.) and MINECO (BIO2015-70092-R and ERC-2014-CoG-648201 to X.S.). Research at the IJC is supported by the ‘La Caixa’ Foundation, Fundació Internacional Josep Carreras, Celgene Spain and the CERCA Programme/Generalitat de Catalunya.
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- 2021
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23. Phylogenetics, historical biogeography and molecular species delimitation of Gnaptorina Reitter (Coleoptera: Tenebrionidae: Blaptini)
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Zhao Pan, Xing-Long Bai, Gael J. Kergoat, Xiu Min Li, Guo Dong Ren, Hebei University, Key Laboratory of Zoological Systematics and Application, Institute of Life Science and Green Development, College of Life Sciences, Hebei University, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), This study was financially supported by the National Natural Science Foundation of China (No. 31572309, and No. 31970452).
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0106 biological sciences ,0303 health sciences ,Biogeography ,[SDV]Life Sciences [q-bio] ,Gnaptorina ,Biology ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Evolutionary biology ,Phylogenetics ,Insect Science ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
International audience; With 38 described species or subspecies, Gnaptorina Reitter is the second-most species-rich genus in the darkling beetle subtribe Gnaptorinina (Tenebrionidae: Tenebrioninae). In this study, we reconstructed a phylogeny of the genus based on one nuclear and three mitochondrial genes and used this phylogeny to explore the historical biography and diversification of Gnaptorina species. We implemented multiple molecular species delimitation approaches to reassess the status of Gnaptorina species and taxonomic subdivisions of the genus. Dating and historical biogeography analyses suggest an early Eocene origin of the genus, with the southeastern regions of the Tibetan Plateau most likely as areas of origin. Based on these results, we propose a new classification for Gnaptorina with three major clades identified. Consequently, the monotypic subgenus Boreoptorina is newly synonymized with the more species-rich subgenus Hesperoptorina, and G. dongdashanensis Shi is transferred from Hesperoptorina to the subgenus Gnaptorina. In addition, G. minxiana Medvedev, formerly treated as a subspecies of G. potanini Reitter, is elevated to species. Results of molecular species delimitation analyses are largely congruent and confirm the status of most morphological species.
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- 2021
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24. Correction: Mitochondrial and Nuclear Genes-Based Phylogeography of (Murinae) and Sub-Saharan Open Habitats Pleistocene History.
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Gauthier Dobigny, Caroline Tatard, Philippe Gauthier, Khalilou Ba, Jean-Marc Duplantier, Laurent Granjon, and Gael J. Kergoat
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Medicine ,Science - Published
- 2013
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25. Genomic balancing selection is key to the invasive success of the fall armyworm
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Thierry Brévault, Estelle Fiteni, Gael J. Kergoat, Fabrice Legeai, Carlos A. Blanco, Wee Tek Tay, Sylvie Gimenez, Robert L. Meagher, Nicolas Nègre, Asokan Ramasamy, Karl D. Gordon, Marie Frayssinet, Sharanabasappa Deshmukh, Thomas J. Walsh, Sudeeptha Yainna, Pierre Silvie, Anicet G. Dassou, Anne-Laure Clamens, C. M. Kalleshwaraswamy, Emmanuelle d'Alençon, Kiwoong Nam, Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Université de Montpellier (UM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon, Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Université de Rennes (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-INSTITUT AGRO Agrocampus Ouest, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université de Bretagne Sud (UBS)-École normale supérieure - Rennes (ENS Rennes)-Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Centre National de la Recherche Scientifique (CNRS)-IMT Atlantique (IMT Atlantique), Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Indian Institute of Horticultural Research [Bangalore] (ICAR), Department of Entomology, College of Agriculture, University of Agricultural and Horticultural Sciences [Shivamogga] (UAHS), United States Department of Agriculture - Agricultural Research Service (USDA-ARS), United States Department of Agriculture - Animal and Plant Health Inspection Service, Partenaires INRAE, Agroécologie et Intensification Durables des cultures annuelles (UPR AIDA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST), Université Nationale des Sciences, Technologies, Ingénierie et Mathématiques (UNSTIM), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-AGROCAMPUS OUEST, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Université de Bretagne Sud (UBS)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National de Recherche en Informatique et en Automatique (Inria)-École normale supérieure - Rennes (ENS Rennes)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-CentraleSupélec-IMT Atlantique Bretagne-Pays de la Loire (IMT Atlantique), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Indian Institute of Horticultural Research (ICAR)
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0106 biological sciences ,0303 health sciences ,education.field_of_study ,Old World ,Population size ,[SDV]Life Sciences [q-bio] ,Population ,Zoology ,15. Life on land ,Biology ,biology.organism_classification ,Balancing selection ,010603 evolutionary biology ,01 natural sciences ,Population genomics ,Loss of heterozygosity ,03 medical and health sciences ,0302 clinical medicine ,Population bottleneck ,Evolutionary biology ,030220 oncology & carcinogenesis ,Inbreeding depression ,Fall armyworm ,education ,030304 developmental biology - Abstract
A successful biological invasion involves survival in a newly occupied environment. If a population bottleneck occurs during an invasion, the resulting depletion of genetic variants could cause increased inbreeding depression and decreased adaptive potential, which may result in a fitness reduction. How invasive populations survive in the newly occupied environment despite reduced heterozygosity and how, in many cases, they maintain moderate levels of heterozygosity are still contentious issues1. The Fall armyworm (FAW; Lepidoptera: Spodoptera frugiperda), a polyphagous pest, is native to the Western hemisphere. Its invasion in the Old World was first reported from West Africa in early 2016, and in less than four years, it swept sub-Saharan Africa and Asia, finally reaching Australia. We used population genomics approaches to investigate the factors that may explain the invasive success of the FAW. Here we show that genomic balancing selection played a key role in invasive success by restoring heterozygosity before the global invasion. We observe a drastic loss of mitochondrial polymorphism in invasive populations, whereas nuclear heterozygosity exhibits a mild reduction. The population from Benin in West Africa has the lowest length of linkage disequilibrium amongst all invasive and native populations despite its reduced population size. This result indicates that balancing selection increased heterozygosity by facilitating the admixture of invasive populations from distinct origins and that, once heterozygosity was sufficiently high, FAW started spreading globally in the Old World. As comparable heterozygosity levels between invasive and native populations are commonly observed1, we postulate that the restoration of heterozygosity through balancing selection could be widespread among successful cases of biological invasions.
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- 2020
26. Phylogeny and systematics of the Sesamia coniota Hampson species group (Lepidoptera : Noctuidae : Noctuinae : Apameini : Sesamiina), with the description of three new species from the Afrotropical region
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Gael J. Kergoat, Bruno Le Ru, Anne Laure Clamens, Johnnie Van den Berg, Claire Capdevielle-Dulac, D. Cugala, Casper Nyamukondiwa, Desmond Conlong, Boaz K. Musyoka, George Ong’amo, Michel Sezonlin, 12319724 - Van den Berg, Johann, International Centre of Insect Physiology and Ecology (ICIPE), ICIPE, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Université Paris-Saclay, Université d’Abomey-Calavi (UAC), South African Sugarcane Research Institute, University of ZwaZulu-Natal, Partenaires INRAE, North-West University [Potchefstroom] (NWU), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Eduardo Mondlane University, Botswana International University of Science & Technology (BIUST), University of Nairobi (UoN), IRD, project IMPACT_PHYTO - Division for Plant Health and Environment (SPE) of INRAE, icipe -African Insect Science for Food and Health (Kenya), program 'Bibliotheque du Vivant' ('Library of Life') (Project Noctuid Stem Borer Biodiversity, NSBB) - CNRS, NSBB) - INRAE, and NSBB) - MNHN consortium
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0106 biological sciences ,0301 basic medicine ,Systematics ,Species complex ,[SDV]Life Sciences [q-bio] ,Apameini ,010603 evolutionary biology ,01 natural sciences ,molecular phylogenetics ,03 medical and health sciences ,taxonomy ,Botany ,morphology ,Schoenoplectus ,Sesamia ,species complex ,systematics ,Ecology, Evolution, Behavior and Systematics ,biology ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,15. Life on land ,biology.organism_classification ,Noctuinae ,host-plants ,030104 developmental biology ,Insect Science ,Molecular phylogenetics ,Taxonomy (biology) - Abstract
In this study, we review six morphologically similar species of Sesamia Guenée, 1852 from Africa, including three new species that are described: Sesamia corymbosus Le Ru n. sp., S. schoenoplectus Le Ru n. sp. and S. temberma Le Ru n. sp. These six species belong to a species complex that we hereby define as the Sesamia coniota group. Host plants of four species are recorded: Schoenoplectus corymbosus (Roth ex Roem. & Schult.) J. Raynal. for S. corymbosus and S. schoenoplectus, Echinochloa pyramidalis (Lam.) Hitschc. & Chase, Eriochloa meyeriana (Nees) Pilg., Schoenoplectus corymbosus and Typha latifolia L. for S. jansei, Tams & Bowden, 1953 and Pennisetum sp. for S. temberma. We also conduct molecular phylogenetic analyses on a multimarker (four mitochondrial and two nuclear genes) molecular dataset encompassing 36 specimens (including 32 specimens belonging to the S. coniota group). Molecular analyses allow assessing the phylogenetic relationships of five out of six species of the group Phylogénie and systématique du groupe d’espèces Sesamia coniota (Lepidoptera : Noctuidae : Apameini : Sesamiina) avec la description de trois nouvelles espèces de la région afrotropicale. Dans cette étude, nous passons en revue six espèces du genre Sesamia Guenée, 1852 distribuées en Afrique. Trois nouvelles espèces sont décrites : Sesamia corymbosus Le Ru n. sp., S. schoenoplectus Le Ru n. sp. et S. temberma Le Ru n. sp. Ces six espèces appartiennent à un complexe d’espèces que nous définissons comme le groupe d’espèce Sesamia coniota. Les plantes-hôtes de quatre espèces sont répertoriées : Schoenoplectus corymbosus (Roth ex Roem. & Schult.) J. Raynal. pour S. corymbosus et S. schoenoplectus, Echinochloa pyramidalis (Lam.) Hitschc. & Chase, Eriochloa meyeriana (Nees) Pilg., Schoenoplectus corymbosus et Typha latifolia L. pour S. jansei Tams & Bowden, 1953, et Pennisetum sp. pour S. temberma. Nous avons également réalisé des analyses de reconstruction phylogénétique sur un jeu de données moléculaires multimarqueurs (quatre gènes mitochondriaux et deux gènes nucléaires) comprenant 36 spécimens (dont 32 appartiennent au groupe d’espèce S. coniota). Les analyses moléculaires permettent d’inférer les relations phylogénétiques de cinq des six espèces du groupe
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- 2020
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27. Toward an understanding of the systematics and evolution of the genus Acrapex Hampson, 1894 (Lepidoptera: Noctuidae: Apameini: Sesamiina): molecular phylogenetics of the genus and review of the species-rich Acrapex aenigma group
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Boaz K. Musyoka, Beatrice Pallangyo, George Ong’amo, Muluken Goftishu, Gilson Chipabika, Gael J. Kergoat, Bruno Le Ru, Jérôme Barbut, D. E. Conlong, Yoseph Assefa, Mohamedi Njaku, Claire Capdevielle-Dulac, International Centre of Insect Physiology and Ecology (ICIPE), ICIPE, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Université Paris-Sud - Paris 11 (UP11), Biocontrol Programme, Haramaya University (HU), University of Swaziland, Zambia Agriculture Research Institute, Partenaires INRAE, South African Sugarcane Research Institute, University of KwaZulu-Natal (UKZN), University of Nairobi (UoN), Muséum national d'Histoire naturelle (MNHN), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), IRD, by the project IMPACT_PHYTO - Division for Plant Health and Environment (SPE) of INRA, icipe, project Noctuid Stem Borer Biodiversity (NSBB) - program 'Bibliotheque du Vivant' ('Library of Life'), Program (Project Noctuid Stem Borer Biodiversity, and NSBB) Centre National de la Recherche Scientifique (CNRS) INRA MNHN
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0106 biological sciences ,Systematics ,0303 health sciences ,Species complex ,biology ,morphologyspecies complex ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,Zoology ,molecular species delimitation ,15. Life on land ,Apameini ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Noctuinae ,Lepidoptera genitalia ,03 medical and health sciences ,Genus ,cular phylogenetics ,Insect Science ,Molecular phylogenetics ,Noctuidae ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,integrative taxonomymole - Abstract
International audience; Summary: With a species count reaching almost 100 species, the genus Acrapex is the most diverse genus of sesamiine stemborers (Lepidoptera: Noctuidae: Noctuinae: Apameini: Sesamiina). Acrapex species are mostly distributed in the Afrotropics and consist of several large clades corresponding to distinct species complexes. In this study, 45 morphologically similar species of Acrapex from sub-Saharan Africa are reviewed, including 22 new species that are described: Acrapex alemuran. sp., A. barnsin. sp., A. capelongon. sp., A. congoensisn. sp., A. elgonan. sp., A. elisabethianan. sp., A. eucanthan. sp., A. grandisn. sp., A. igominyin. sp., A. inexpectatan. sp., A. ketoman. sp., A. lilomwin. sp., A. mafingan. sp., A. maketen. sp., A. marungun. sp., A. mazoen. sp., A. mlanjen. sp., Acrapex muchingan. sp., A. ngorongoron. sp., A. obscuran. sp., A. ruirun. sp. and A. wittein. sp. Supplemental descriptions for previously described species are provided as well. These 45 species are assigned to the newly defined Acrapex aenigma species group. We also conduct molecular phylogenetic analyses and molecular species delimitation analyses on a multi-marker (four mitochondrial and two nuclear genes) molecular dataset encompassing 304 specimens (including 256 Acrapex specimens from 54 species of which 16 species belong to the A. aenigma group). Molecular phylogenetics analyses recover well-supported relationships within Acrapex and support the monophyly of the newly defined group. Results of molecular species delimitation analyses are mostly congruent and tend to corroborate the status of the sampled Acrapex species. Consistent with what has been previously found in other studies, the comparison of results from distinct methods and settings for molecular species delimitation analyses allows us to assess species boundaries with more confidence.; Avec près d’une centaine d’espèces le genre Acrapex est le genre de noctuelles foreuses le plus diversifié de la sous-tribu des Sesamiina (Lepidoptera : Noctuidae : Noctuinae : Apameini). Les Acrapex sont majoritairement distribués dans la région Afrotropicale et sont composés de plusieurs clades correspondant à différents complexes d’espèces. Dans cette étude, 45 espèces morphologiquement proches d’Acrapex sub-sahariens sont étudiées, au rang desquelles figurent 22 nouvelles espèces que nous décrivons : Acrapex alemura n. sp., A. barnsi n. sp., A. capelongo n. sp., A. congoensis n. sp., A. elgona n. sp., A. elisabethiana n. sp., A. eucantha n. sp., A. grandis n. sp., A. igominyi n. sp., A. inexpectata n. sp., A. ketoma n. sp., A. lilomwi n. sp., A. mafinga n. sp., A. makete n. sp., A. marungu n. sp., A. mazoe n. sp., A. mlanje n. sp., A. muchinga n. sp., A. ngorongoro n. sp., A. obscura n. sp., A. ruiru n. sp., and A. wittei n. sp. Nous fournissons également des descriptions supplémentaires pour des espèces déjà décrites. Ces 45 espèces sont assignées au groupe d’espèces Acrapex aenigma, que nous définissons. Nous avons également réalisé des analyses de reconstruction phylogénétique et des analyses de délimitation moléculaire d’espèces sur un jeu de données moléculaires multimarqueurs (quatre gènes mitochondriaux et deux gènes nucléaires) comprenant 304 spécimens (incluant 256 Acrapex de 54 espèces dont 16 appartiennent au groupe A. aenigma). Les analyses phylogénétiques retrouvent des topologies bien supportées au sein du genre Acrapex et soutiennent l’hypothèse de monophylie du groupe d’espèces nouvellement défini. Les résultats des analyses de délimitation moléculaire d’espèces sont majoritaitement en accord et tendent à soutenir le statut d’espèce des Acrapex échantillonnés. Conformément à ce qui a été mis en évidence dans d’autres études, la comparaison des résultats de différentes méthodes et paramétrages d’analyses de délimitation moléculaire d’espèces permet ainsi d’estimer les contours des espèces avec plus de confiance.
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- 2020
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28. Phylogeny and evolution of the genus Ctenocolum Kingsolver & Whitehead (Coleoptera, Chrysomelidae, Bruchinae), with the description of three new species
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Cibele S. Ribeiro-Costa, Gael J. Kergoat, Daiara Manfio, Isaac Reis Jorge, Universidade Tecnológica Federal do Paraná [Curitiba] (UTFPR), Laboratório de Sistemática e Bioecologia de Coleoptera, Departamento de Zoologia, Universidade Federal do Paraná (UFPR), Universidade Federal do Parana [Curitiba] (UFPR), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), We thank Alexander Konstantinov and Elisabeth Roberts, United States National Museum, Smithsonian Institution, that kindly received the two first authors in the USNM and for the loan of specimens that enable this study, and the Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES) for the scholarship for the first author and the Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq) for the scholarships for the second and fourth authors. This is the contribution number 1937 of the Departamento de Zoologia, Universidade Federal do Parana, Curitiba, Brazil.
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0106 biological sciences ,Biogeography ,010607 zoology ,Zoology ,Biology ,010603 evolutionary biology ,01 natural sciences ,taxonomy ,Monophyly ,Genus ,Phylogenetics ,bruchinae ,phylogenetic analyses ,Western hemisphere ,biogeography ,Ecology, Evolution, Behavior and Systematics ,new species ,Synapomorphy ,Ecology ,Phylogenetic tree ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,15. Life on land ,acanthoscelidina ,host plants ,Insect Science ,Type locality ,Taxonomy (biology) - Abstract
The seed beetle genus Ctenocolum Kingsolver & Whitehead is peculiar because its preferred host Lonchocharpus Kunth (Fabaceae) is not preyed upon by other bruchine species. This study investigates the phylogenetic relationships and evolution of this genus and of its species groups, while providing the description of three new species and of the male of C. biolleyi Kingsolver & Whitehead. To infer phylogenetic relationships, a character matrix of 40 morphological characters was assembled and analysed using both parsimony and Bayesian inference. Ancestral state estimations of host plant use and biogeography analyses were also performed. A total of 22 species were examined: 16 Ctenocolum species (including the three new ones) and six outgroup bruchine species (from genera Caryedes Hummel, Meibomeus Bridwell, Pygiopachymerus Pic and Pachymerus Thunberg). All resulting trees support the monophyly of the genus Ctenocolum. Three synapomorphies characterize the genus: (i) head with frontal carina enlarged at base, (ii) male pygidium truncated apically, and (iii) lateral lobes of tegmen with dorsal process. The two known species groups are also recovered monophyletic in the parsimony analyses. The following three species are described: Ctenocolum inmaculatus Manfio & Ribeiro-Costa sp. nov. (Type locality: Venezuela, Guarico), which belongs to the group tuberculatum; Ctenocolum nigronotus Manfio & Ribeiro-Costa sp. nov. (Type locality: Porto Rico, Mayaguez) and C. pallidus Manfio & Ribeiro-Costa sp. nov. (Type locality: Republic of Guyana), which belong to the group podagricus. Finally, we present colored illustrations of dorsal patterns and male genitalia for these three new species and C. biolleyi in addition to an updated key for the genus Ctenocolum.
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- 2018
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29. A novel reference dated phylogeny for the genus Spodoptera Guenée (Lepidoptera: Noctuidae: Noctuinae): new insights into the evolution of a pest-rich genus
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Sylvie Gimenez, Nicolas Nègre, Alberto Zilli, Bruno Le Ru, Jérôme Barbut, Gael J. Kergoat, Andrew Mitchell, Emmanuelle d'Alençon, Paul Z. Goldstein, Kiwoong Nam, Anne-Laure Clamens, Robert L. Meagher, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Smithsonian Institution, ARS - Systematic Entomology Laboratory, United States Department of Agriculture, International Centre of Insect Physiology and Ecology (ICIPE), ICIPE, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), United States Department of Agriculture (USDA), USDA-ARS : Agricultural Research Service, The Natural History Museum [London] (NHM), Departement of Life Sciences, Natural History Museum, Australian Museum Research Institute (AMRI), Australian Museum [Sydney], Diversité, Génomes & Interactions Microorganismes - Insectes [Montpellier] (DGIMI), Université de Montpellier (UM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), This work (ID 1702-018) was publicly funded through ANR (the French National Research Agency) under the 'Investissements d’avenir' programme with the reference ANR-10-LABX-001 Labex Agro and coordinated by Agropolis Fondation under the frame of I-SITE MUSE (ANR-16-IDEX-0006). Additional funding and support was provided by the ‘Plant Health and Environment’ Division of INRAE (project ‘Geno_Army’)., ANR-10-LABX-0001,AGRO,Agricultural Sciences for sustainable Development(2010), ANR-16-IDEX-0006,MUSE,MUSE(2016), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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0106 biological sciences ,0301 basic medicine ,[SDV]Life Sciences [q-bio] ,Population ,Insect pest ,Spodoptera ,010603 evolutionary biology ,01 natural sciences ,Host-Parasite Interactions ,Coalescent theory ,Evolution, Molecular ,Population genomics ,03 medical and health sciences ,Genus ,Genetics ,Animals ,Armyworm ,education ,Clade ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,education.field_of_study ,biology ,Phylogenetic tree ,fungi ,15. Life on land ,biology.organism_classification ,Noctuinae ,Phylogenetics ,Phylogeography ,030104 developmental biology ,Evolutionary biology ,Molecular dating ,Multiple species coalescent - Abstract
International audience; The noctuid genus Spodoptera currently consists of 31 species with varied host plant breadths, ranging from monophagous and oligophagous non-pest species to polyphagous pests of economic importance. Several of these pest species have become major invaders, colonizing multiple continents outside their native range. Such is the case of the infamous fall armyworm, Spodoptera frugiperda (J.E. Smith), which includes two recognized host strains that have not been treated as separate species. Following its accidental introduction to Africa in 2016, it quickly spread through Africa and Asia to Australia. Given that half the described Spodoptera species cause major crop losses, comparative genomics studies of several Spodoptera species have highlighted major adaptive changes in genetic architecture, possibly relating to their pest status. Several recent population genomics studies conducted on two species enable a more refined understanding of their population structures, migration patterns and invasion processes. Despite growing interest in the genus, the taxonomic status of several Spodoptera species remains unstable and evolutionary studies suffer from the absence of a robust and comprehensive dated phylogenetic framework. We generated mitogenomic data for 14 Spodoptera taxa, which are combined with data from 15 noctuoid outgroups to generate a resolved mitogenomic backbone phylogeny using both concatenation and multi-species coalescent approaches. We combine this backbone with additional mitochondrial and nuclear data to improve our understanding of the evolutionary history of the genus. We also carry out comprehensive dating analyses, which implement three distinct calibration strategies based on either primary or secondary fossil calibrations. Our results provide an updated phylogenetic framework for 28 Spodoptera species, identifying two well-supported ecologically diverse clades that are recovered for the first time. Well-studied larvae in each of these clades are characterized by differences in mandibular shape, with one clade's being more specialized on silica-rich C4 grasses. Interestingly, the inferred timeframe for the genus suggests an earlier origin than previously thought for the genus: about 17-18 million years ago.Highlights:• Use of genome skimming to generate mitogenomic data for 14 Spodoptera species.• Inference of a high-quality backbone phylogeny for the genus Spodoptera.• We propose a new updated phylogenetic framework for 28 of the 31 Spodoptera species.• Two ecologically diverse Spodoptera clades are recovered for the first time.• Dating analyses indicate a more recent origin than previously thought for Spodoptera.
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- 2021
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30. A new pest of lychees in New Caledonia
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Gael J. Kergoat, Andrew Mitchell, Sylvie Cazères, K. Letellier, L. Marchal, Christian Mille, Romain Nattier, Stn. Rech. Agronom. Pocquereux, Institut Agronomique Néo-Calédonien (IAC), Stn. Rech. Agronom. Pocquereux, Axe 1: Connaissance et Amélioration des Agrosystèmes, Axe Divers. Biol. & Fonct. Ecosyst. Terr. 2, Australian Museum Res. Inst., Australian Museum [Sydney], Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), Sorbonne Université (SU), Université Pierre et Marie Curie - Paris 6 (UPMC), École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL), Centre National de la Recherche Scientifique (CNRS), Muséum national d'Histoire naturelle (MNHN)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), and École pratique des hautes études (EPHE)
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0106 biological sciences ,0301 basic medicine ,[SDV]Life Sciences [q-bio] ,Anthribinae ,molecular identification ,Litchi chinensis ,Biology ,Agricultural pest ,010603 evolutionary biology ,01 natural sciences ,Acanthopygus ,03 medical and health sciences ,Botany ,xylophagous ,agricultural pest ,Anthribidae ,Molecular identification ,Ecology ,Weevil ,Curculionoidea ,biology.organism_classification ,Coleoptera ,030104 developmental biology ,Animal Science and Zoology ,PEST analysis - Abstract
A new and very occasional pest of lychee trees (Litchi chinensis) was recently identified from New Caledonia—the endemic weevil Acanthopygus griseus Montrouzier, 1861 (Coleoptera: Anthribidae). This is the first report of an anthribid weevil causing significant damage to living trees.
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- 2016
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31. Fossils know it best: Using a new set of fossil calibrations to improve the temporal phylogenetic framework of murid rodents (Rodentia: Muridae)
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Tatiana Aghová, Josef Bryja, Gael J. Kergoat, Gauthier Dobigny, Yuri Kimura, Laurent Granjon, Institute of Vertebrate Biology of the Czech Academy of Sciences (IVB / CAS), Czech Academy of Sciences [Prague] (CAS), National Museum of Natural History, Prague, Department of Botany and Zoology [Brno] (SCI / MUNI), Faculty of Science [Brno] (SCI / MUNI), Masaryk University [Brno] (MUNI)-Masaryk University [Brno] (MUNI), Department of Geology and Paleontology, National Museum of Nature and Science, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Ecole Polytechnique d'Abomey Calavi (EPAC), Université d’Abomey-Calavi = University of Abomey Calavi (UAC), This study was supported by two projects of the Czech Science Foundation, nos. 15-20229S and 18-17398S, the Ministry of Culture of the Czech Republic (DKRVO 2017/15, National Museum, 00023272) and JSPS KAKENHI JP15H06884 (Grant-in-Aid for Young Scientists Start-up) and JSPS KAKENHI Grant Number 18 K13650., Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), and University of Abomey Calavi (UAC)
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0106 biological sciences ,0301 basic medicine ,Deomyinae ,Time Factors ,Biogeography ,010603 evolutionary biology ,01 natural sciences ,Historical biogeography ,03 medical and health sciences ,Monophyly ,Phylogenetics ,Genetics ,Vicariance ,Animals ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Muridae ,biology ,Phylogenetic tree ,Fossils ,Rattus ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,Mus ,Murinae ,Bayes Theorem ,biology.organism_classification ,Phylogeography ,030104 developmental biology ,Evolutionary biology ,Calibration ,Molecular dating - Abstract
International audience; Murid rodents (Rodentia: Muridae) represent the most diverse and abundant mammalian family. In this study, we provide a refined set of fossil calibrations which is used to reconstruct a dated phylogeny of the family using a multilocus dataset (six nuclear and nine mitochondrial gene fragments) encompassing 161 species representing 82 murid genera from four extant subfamilies (Deomyinae, Gerbillinae, Lophiomyinae and Murinae). In comparison with previous studies on murid or muroid rodents, our work stands out for the implementation of nine robust fossil constraints within the Muridae thanks to a thorough review of the fossil record. Before being assigned to specific nodes of the phylogeny, all potential fossil constraints were carefully assessed; they were also subjected to several cross-validation analyses. The resulting phylogeny is consistent with previous phylogenetic studies on murids, and recovers the monophyly of all sampled murid subfamilies and tribes. Based on nine controlled fossil calibrations, our inferred temporal timeframe indicates that the murid family likely originated in the course of the Early Miocene, 22.0-17.0 million years ago (Ma), and that most major lineages (i.e. tribes) started diversifying ca. 10 Ma. Historical biogeography analyses support the tropical origin for the family, with an initial internal split (vicariance event) between Afrotropical and Oriental (Indomalaya and Philippines) lineages. During the course of their diversification, the biogeographic pattern of murids is marked by several dispersal events toward the Australasian and the Palearctic regions. The Afrotropical region was also secondarily colonized a least three times from the Indomalaya, indicating that the latter region has acted as a major centre of diversification for the family.
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- 2018
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32. Transcriptional differences between the two host strains of Spodoptera frugiperda (Lepidoptera: Noctuidae)
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Stéphanie Rialle, Philippe Audiot, Marion Orsucci, Marie Frayssinet, Gael J. Kergoat, Robert L. Meagher, Rima Nait-Saidi, Rachid Koual, Yves Moné, Marin Vabre, Sylvie Gimenez, Jean-Paul Boudon, Sandra Nhim, Emmanuelle d'Alençon, Nicolas Nègre, Guillaume Dumont, and Rodney N. Nagoshi
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0106 biological sciences ,2. Zero hunger ,Genetics ,0303 health sciences ,Larva ,Host (biology) ,Strain (biology) ,fungi ,food and beverages ,Biology ,Spodoptera ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Lepidoptera genitalia ,03 medical and health sciences ,Genotype ,Noctuidae ,PEST analysis ,030304 developmental biology - Abstract
Spodoptera frugiperda, the fall armyworm (FAW), is an important agricultural pest in the Americas and an emerging pest in sub-Saharan Africa, India, East-Asia and Australia, causing damage to major crops such as corn, sorghum and soybean. While FAW larvae are considered polyphagous, differences in diet preference have been described between two genetic variants: the corn strain (sf-C) and the rice strain (sf-R). These two strains are sometimes considered as distinct species, raising the hypothesis that ost plant specialization might have driven their divergence. To test this hypothesis, we irst performed controlled reciprocal transplant (RT) experiments to address the impact of plant diet on several traits linked to the fitness of the sf-C and sf-R strains. The phenotypical data suggest that sf-C is specialized to corn. We then used RNA-Se to identify constitutive transcriptional differences between strains, regardless of diet, in laboratory as well as in natural populations. We found that variations in mitochon rial transcription levels are among the most substantial and consistent differences between the two strains. Since mitochondrial genotypes also vary between the strains, we believe the mitochondria may have a significant role in driving strain divergence.
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- 2018
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33. Re-establishment of Spodoptera teferii Laporte in Rougeot (Lepidoptera: Noctuidae, Noctuinae), with an updated molecular phylogeny for the genus Spodoptera Guenee
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Claire Capdevielle-Dulac, Gael J. Kergoat, Muluken Goftishu, Bruno Le Ru, Jérôme Barbut, Muséum national d'Histoire naturelle (MNHN), School of Plant Sciences, University of Arizona, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), IRD, project IMPACT_PHYTO - Division for Plant Health and Environment (SPE) of INRA, and International Centre of Insect Physiology and Ecology (ICIPE)
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0106 biological sciences ,0301 basic medicine ,molecular species ,Afrotropical region ,Spodoptera ,010603 evolutionary biology ,01 natural sciences ,Lepidoptera genitalia ,molecular phylogenetics ,03 medical and health sciences ,taxonomy ,Botany ,Ecology, Evolution, Behavior and Systematics ,biology ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,fungi ,delimitation ,molecular species delimitation ,15. Life on land ,biology.organism_classification ,Noctuinae ,030104 developmental biology ,Insect Science ,Molecular phylogenetics ,Noctuidae ,Taxonomy (biology) - Abstract
International audience; The genus Spodoptera Guenee (Lepidoptera: Noctuidae, Noctuinae) is a group of economic importance which encompasses several major pests of crops worldwide. Although this genus has been the focus of many studies, the status of several Spodoptera species is still unstable, especially in the light of recent molecular analyses. In 2015 five Spodoptera specimens collected in Ethiopia were first identified as S. apertura (Walker). However, preliminary studies suggested that these specimens belong to a distinct species, S. teferii Laporte in Rougeot, which has been previously synonymized with S. apertura. In this study, on the basis of morphological and molecular evidence, we re-establish the species status of S. teferii. We provide a supplemental description of S. teferii male and the first description of S. teferii female. We also conducted several molecular analyses. First, we reconstructed an updated phylogeny for the genus based on a multilocus dataset (four mitochondrial and three nuclear gene fragments) including S. teferii and 28 of the 31 currently recognized Spodoptera species; the results of phylogenetic analyses support the hypothesis that S. teferii is more closely related to the clade encompassing S. littoralis (Boisduval), S. litura (Fabricius), S. pectinicornis (Hampson) and S. picta (Guerin-Meneville) than to S. apertura. Second, we carried out molecular species delimitation analyses on a 683-specimen dataset that also clearly support the status of S. teferii as a species distinct to S. apertura.
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- 2018
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34. Integrative taxonomy reveals six new species related to the Mediterranean corn stalk borerSesamia nonagrioides(Lefèbvre) (Lepidoptera, Noctuidae, Sesamiina)
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Grégoire Bani, George Ong’amo, Emmanuel F. A. Toussaint, Onésime Mubenga, Bruno Le Ru, Richard Molo, D. Cugala, Claire Capdevielle-Dulac, Jean-François Silvain, Desmond Conlong, Rose Ndemah, Johnnie Van den Berg, Michel Sezonlin, Paul-André Calatayud, Beatrice Pallangyo, Gael J. Kergoat, Gilson Chipabika, Abdalla Ali, Anne-Laure Clamens, and Laure Kaiser
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education.field_of_study ,biology ,Ecology ,Population ,Sesamia nonagrioides ,Allopatric speciation ,Population genetics ,Species diversity ,15. Life on land ,Subspecies ,biology.organism_classification ,Lepidoptera genitalia ,Animal Science and Zoology ,Taxonomy (biology) ,education ,Ecology, Evolution, Behavior and Systematics - Abstract
Species in the stem borer noctuid subtribe Sesamiina are notoriously difficult to distinguish because most related species have homogeneous wing patterns and almost indistinguishable genitalia. The latter is potentially problematic because this group includes several important pest species that are usually baregly distinguishable from non-pest species. In this study we focus on the Mediterranean corn stalk borer Sesamia nonagrioides (Lefebvre), an important pest of maize with a wide area of distribution that covers most of Africa and extends to the south of Europe and western Asia. According to a recent study, this pest consists of three allopatric populations that were formerly considered as distinct species or subspecies. Here we rely on recent collections of 5470 specimens (sampled in 17 countries and 175 localities) that putatively belong to S. nonagrioides. Integrative taxonomy studies allowed us to unravel the existence of six new species that are closely related to S. nonagrioides and described in this paper. In contrast to S. nonagrioides these new species have more specific ecological preferences, as they are associated with a limited number of plant species and habitats. Dating and population genetic analyses carried out on 100 S. nonagrioides specimens also indicate a more complex population structure than previously thought for S. nonagrioides, which can probably be accounted for by late Cenozoic environmental changes. © 2015 The Linnean Society of London
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- 2015
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35. REVIEW: Predictive ecology in a changing world
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Gael J. Kergoat, Laurence Meslin, Luc Doyen, Dominique Joly, Romain Julliard, Philippe Jarne, Michel Loreau, Frankl M. Schurr, Nicolas Mouquet, Roger Pradel, Olivier Gimenez, Hélène Morlon, Wilfried Thuiller, Sonia Kéfi, Yvan Lagadeuc, Xavier Morin, Denis Faure, Damien Eveillard, Vincent Devictor, Gilles Pinay, Franck Jabot, Eric Garnier, Anne Duputié, Serge Morand, Philippe Huneman, Sandra Lavorel, Line Le Gall, MARine Biodiversity Exploitation and Conservation ( UMR MARBEC ), Institut de Recherche pour le Développement ( IRD ) -Institut Français de Recherche pour l'Exploitation de la Mer ( IFREMER ) -Université de Montpellier ( UM ) -Centre National de la Recherche Scientifique ( CNRS ), Ecosystèmes, biodiversité, évolution [Rennes] ( ECOBIO ), Université de Rennes 1 ( UR1 ), Université de Rennes ( UNIV-RENNES ) -Université de Rennes ( UNIV-RENNES ) -INEE-Observatoire des Sciences de l'Univers de Rennes ( OSUR ) -Centre National de la Recherche Scientifique ( CNRS ), Institut des Sciences de l'Evolution de Montpellier ( ISEM ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Université de Montpellier ( UM ) -Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique ( CNRS ), inconnu temporaire UPEMLV, Inconnu, Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 ( Evo-Eco-Paléo ), Université de Lille-Centre National de la Recherche Scientifique ( CNRS ), Laboratoire d'Informatique de Nantes Atlantique ( LINA ), Mines Nantes ( Mines Nantes ) -Université de Nantes ( UN ) -Centre National de la Recherche Scientifique ( CNRS ), Institut de Biologie Intégrative de la Cellule ( I2BC ), Université Paris-Sud - Paris 11 ( UP11 ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ), ONERA - The French Aerospace Lab ( Meudon ), ONERA, Centre d’Ecologie Fonctionnelle et Evolutive ( CEFE ), Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Centre National de la Recherche Scientifique ( CNRS ) -Université de Montpellier ( UM ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -École pratique des hautes études ( EPHE ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -Université Paul-Valéry - Montpellier 3 ( UM3 ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), Institut d'Histoire et de Philosophie des Sciences et des Techniques ( IHPST ), Université Panthéon-Sorbonne ( UP1 ) -Département d'Etudes Cognitives - ENS Paris ( DEC ), École normale supérieure - Paris ( ENS Paris ) -École normale supérieure - Paris ( ENS Paris ) -Centre National de la Recherche Scientifique ( CNRS ), Laboratoire d'ingénierie pour les systèmes complexes ( UR LISC ), Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture ( IRSTEA ), Laboratoire Evolution, Génomes, Comportement, Ecologie, CNRS/Université Paris-Sud UMR9191, IRD UMR247, Université Paris-Sud - Paris 11 ( UP11 ), Muséum National d'Histoire Naturelle ( MNHN ), Centre de Biologie pour la Gestion des Populations ( CBGP ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -Université de Montpellier ( UM ) -Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), Laboratoire d'Ecologie Alpine ( LECA ), Centre National de la Recherche Scientifique ( CNRS ) -Université Savoie Mont Blanc ( USMB [Université de Savoie] [Université de Chambéry] ) -Université Joseph Fourier - Grenoble 1 ( UJF ) -Université Grenoble Alpes ( UGA ), Muséum National d’Histoire Naturelle ( MNHN ), Institut de biologie de l'ENS Paris (UMR 8197/1024) ( IBENS ), Département de Biologie - ENS Paris, École normale supérieure - Paris ( ENS Paris ) -École normale supérieure - Paris ( ENS Paris ) -Institut National de la Santé et de la Recherche Médicale ( INSERM ) -Centre National de la Recherche Scientifique ( CNRS ), UR Riverly, Institut National de Recherche en Sciences et Technologies pour l'Environnement et l'Agriculture ( IRSTEA ), Agence Française de Sécurité Sanitaire des Aliments ( AFSSA ), AFSSA, Theoretical and Experimental Ecology Station, and Centre National de la Recherche Scientifique ( CNRS )
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Ecology (disciplines) ,Big data ,Context (language use) ,Biology ,Ecological systems theory ,010603 evolutionary biology ,01 natural sciences ,law.invention ,law ,Order (exchange) ,ComputingMilieux_MISCELLANEOUS ,0105 earth and related environmental sciences ,[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology ,Ecology ,business.industry ,L70 - Sciences et hygiène vétérinaires - Considérations générales ,15. Life on land ,Open data ,13. Climate action ,Anticipation (artificial intelligence) ,CLARITY ,P01 - Conservation de la nature et ressources foncières ,business - Abstract
1. In a rapidly changing world, ecology has the potential to move from empirical and conceptual stages to application and management issues. It is now possible to make large-scale predictions up to continental or global scales, ranging from the future distribution of biological diversity to changes in ecosystem functioning and services. With these recent developments, ecology has a historical opportunity to become a major actor in the development of a sustainable human society. With this opportunity, however, also comes an important responsibility in developing appropriate predictive models, correctly interpreting their outcomes and communicating their limitations. There is also a danger that predictions grow faster than our understanding of ecological systems, resulting in a gap between the scientists generating the predictions and stakeholders using them (conservation biologists, environmental managers, journalists, policymakers). 2. Here, we use the context provided by the current surge of ecological predictions on the future of biodiversity to clarify what prediction means, and to pinpoint the challenges that should be addressed in order to improve predictive ecological models and the way they are understood and used. 3. Synthesis and applications. Ecologists face several challenges to ensure the healthy development of an operational predictive ecological science: (i) clarity on the distinction between explanatory and anticipatory predictions; (ii) developing new theories at the interface between explanatory and anticipatory predictions; (iii) open data to test and validate predictions; (iv) making predictions operational; and (v) developing a genuine ethics of prediction.
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- 2015
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36. In and out of the Neotropics: historical biogeography of Eneopterinae crickets
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Karla S. C. Yotoko, Jiajia Dong, Romain Nattier, Natállia Vicente, Gael J. Kergoat, Frédéric Legendre, Tony Robillard, Universidade Federal de Vicosa (UFV), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), National Council for Scientific and Technological Development (CNPq), PROTAX : 158726/2013-8, CAPES, PDSE : BEX 2609/14-2, FAPEMIG, SIS-BIOTA Brazil : 563360/2010-0 47/2010, Genoscope (Evry, France) : 2005/67, INRA, MNHN : 2005/67, Centre National de la Recherche Scientifique (CNRS), MNHN, Prince Albert II of Monaco Foundation, Stavros Niarchos Foundation, Total Foundation, Fondation d'entreprise EDF, Fonds Pacifique, Spiecapag, Entrepose Contracting, New Caledonia Government, Reef Foundation, Belgian National Lottery, Universidade Federal de Viçosa = Federal University of Viçosa (UFV), Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE), and Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
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0106 biological sciences ,0301 basic medicine ,Neotropics colonization ,Biogeography ,Lineage (evolution) ,[SDV]Life Sciences [q-bio] ,Context (language use) ,[SDV.BID]Life Sciences [q-bio]/Biodiversity ,Biology ,Disjunct ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Vicariance ,fossil calibration ,Boreotropical dispersal ,Ecology, Evolution, Behavior and Systematics ,disjunct distribution ,Ecology ,historical biogeography ,[SDV.BA]Life Sciences [q-bio]/Animal biology ,Disjunct distribution ,15. Life on land ,biology.organism_classification ,ancestral area reconstruction ,[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology ,dispersal-extinction-cladogenesis ,030104 developmental biology ,crickets ,Biological dispersal ,Eneopterinae ,Bayesian relaxed clock - Abstract
International audience; Aim Multiple biogeographical scenarios involving vicariance and different colonization routes can explain disjunct species distributions in the Southern Hemisphere. Here, we tested several alternative hypotheses in Eneopterinae crickets, a diverse subfamily presenting a disjunct worldwide distribution. We inferred a dated phylogeny of Eneopterinae and reconstructed their biogeographical history to unravel the origin of their present-day distribution, focusing on their multiple origins in the Neotropics.Location Worldwide.Methods We sampled 62 eneopterine species representing all extant genera. We inferred their phylogenetic relationships through Bayesian and maximum likelihood approaches based on four mitochondrial and three nuclear gene sequences. Divergence time estimates were inferred using Bayesian relaxed clock approaches and primary fossil calibrations. Biogeographical analyses were conducted with the default dispersal-extinction-cladogenesis (DEC) model and a variant model (DEC+J), which accounts for rare-jump dispersal events.Results Our dating analyses showed that the Eneopterinae is far older than expected and its diversification can be traced back to the Late Cretaceous (c. 76 Ma). In this context, the most supported biogeographical scenario (under DEC+J) suggests that the Neotropics were colonized twice independently: first during the break-up of Gondwana, when Antarctica, Australia and South America started separating (compatible with a vicariance event if relying on the result of the DEC model alone); later through a northern recolonization originating from Southeast Asia, likely related to a Holarctic Boreotropical distribution of an eneopterine lineage during the Eocene.Main conclusions We provided a dated worldwide biogeographical framework for the Eneopterinae crickets. Overall, the subfamily disjunct distribution pattern is better explained by both ancient and recent dispersal events. Whether this could reflect a widespread pattern in insect groups exhibiting a disjunct distribution remains to be investigated by studying other insect lineages. The information gathered here will also help foster new directions for future studies concerning the acoustic innovations of this clade.
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37. Fossils know it best: using a new set of fossil calibrations to improve the temporal phylogenetic framework of murid rodents (Rodentia: Myomorpha: Muroidea: Muridae)
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Gael J. Kergoat, Josef Bryja, Yuri Kimura, Gauthier Dobigny, Laurent Granjon, and Tatiana Aghová
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Deomyinae ,Monophyly ,biology ,Phylogenetics ,Biogeography ,Vicariance ,Zoology ,Murinae ,respiratory system ,biology.organism_classification ,Muroidea ,Myomorpha - Abstract
Murid rodents (Rodentia: Myomorpha: Muroidea: Muridae) represent the most diverse and abundant mammalian group. In this study, we reconstruct a dated phylogeny of the family using a multilocus dataset (six nuclear and nine mitochondrial gene fragments) encompassing 160 species representing 82 distinct murid genera from four extant subfamilies (Deomyinae, Gerbillinae, Lophiomyinae, and Murinae). In comparison with previous studies on murid or muroid rodents, our work stands out for the implementation of multiple fossil constraints within the Muridae thanks to a thorough review of the fossil record. Before being assigned to specific nodes of the phylogeny, all potential fossil constraints were carefully assessed; they were also subjected to several cross-validation analyses. The resulting phylogeny is consistent with previous phylogenetic studies on murids, and recovers the monophyly of all sampled murid subfamilies and tribes. Based on nine controlled fossil calibrations, our inferred temporal timeframe indicates that the murid family likely originated in the course of the Early Miocene, 23.0-16.0 million years ago (Ma), and that most major lineages (i.e. tribes) have started diversifyingca.10 Ma. Historical biogeography analyses support the Paleotropical origin for the family, with an initial internal split (vicariance event) followed by subsequent migrations between Afrotropical and Indomalayan lineages. During the course of their diversification, the biogeographic pattern of murids is marked by several dispersal events toward the Australasian and the Palearctic regions, mostly from the Indomalaya. The Afrotropical region was also secondarily colonized at least three times from the Indomalaya, indicating that the latter region has acted as a major centre of diversification for the family.
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38. Documenting tenebrionid diversity: progress on Blaps Fabricius (Coleoptera, Tenebrionidae, Tenebrioninae, Blaptini) systematics, with the description of Fve new species
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Insecta ,Arthropoda ,Tenebrionidae ,Animalia ,Biodiversity ,Taxonomy - Abstract
Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, Gael J. Kergoat (2017): Documenting tenebrionid diversity: progress on Blaps Fabricius (Coleoptera, Tenebrionidae, Tenebrioninae, Blaptini) systematics, with the description of Fve new species. European Journal of Taxonomy 282: 1-29, DOI: 10.5852/ejt.2017.282
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39. Blaps effeminata Laurent Soldati & Fabien L. Condamine & Anne-Laure Clamens & Gael J. Kergoat 2017, sp. nov
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Insecta ,Arthropoda ,Blaps ,Blaps effeminata ,Tenebrionidae ,Animalia ,Biodiversity ,Taxonomy - Abstract
Blaps effeminata Soldati sp. nov. urn:lsid:zoobank.org:act:1D90B029-4826-4525-9A59-22B6B0A91806 Fig. 1A–I Etymology The name of this species refers to the lack of abdominal hair tufts in males. Material examined Holotype LIBYA: ♂, “Tombe a Nord di Cirene / Cirenaica, 27.IV.1967, G. Dellacasa & P. Maifredi / Museo Civico di Genova / Blaps polychresta ssp. effeminata Soldati, Holotype” (MCG). Allotype LIBYA: ♀, “Tombe a Nord di Cirene / Cirenaica, 27.IV.1967, G. Dellacasa & P. Maifredi / Museo Civico di Genova / Blaps polychresta ssp. effeminata Soldati, Allotype ” (MCG). Paratypes LIBYA: 17 spec., “Cirene, Cir. 7.6.1936 R.e C. Koch” (HNHM); 16 spec., same data as holotype and allotype (MCG); 1 ♂, “18.IV.1968,Apollonia, Cirenaïque, Libye, D. Seiler leg.” (CS); 2 ♂♂, “Cyrenaika, Cirene, Wohlb. 4.34” (CS); 1 ♀, “Tombe a Nord di Cirene / Cirenaica, 27.IV.1967, G. Dellacasa & P. Maifredi” (CS). Other material (13 specimens, HNHM; 8 specimens, MCG) LIBYA: Cyrene, E Libya, (HNHM); Sho-Hat (HNHM); Al Baida, 32°38.047′ N, 21°47.425′ E (MCG); Al Qubbah, Cyrene, Marsa (Tobruch) (MCG); Uadi el Magrum, E Libya, 15 km W of Tobruch (MCG); Uadi Pescara, E Libya, 16 km W of Tobruch (MCG). Description Length: 26.0–43.0 mm; width: 12.0–15.0 mm. Dull black. Oval-oblong, elongated (Fig. 1A–C). Elytra costulated. Upper surface covered with very fne and sparse punctures, progressively denser from elytra to head. HEAD. Clypeus arcuately emarginated, with lateral angles protruding frontwards, clypeo-labial membrane slightly visible. Clypeo-frontal suture reduced to thin, superfcially engraved glossy line. Middle of frons (disc) with faint, generally obliterated, transverse depression. Mentum transverse, punctate, with anterior third sloping toward anterior edge. Gula microshagreened, dull. Labium triangularly emarginated in middle of front edge. ANTENNAE. Long and slender, reaching pronotal base when directed backwards (Fig. 1D). PRONOTUM. Broadest in its middle, sides more strongly narrowed toward base than forward, not or barely sinuous before posterior angles and arcuately narrowed frontwards. Anterior angles rounded. Posterior angles blunt. External rim fne, complete on lateral margins, but obliterated in middle of front edge and base. Disc convex. Punctation fne, uniform. Carina of anterior foramen of pronotum thick and neckshaped below. Episternum of prosternum wrinkled near coxae and lighter toward margins. Prosternal apophysis oblique or steep and upright towards apex, S-shaped, just behind anterior coxae, then shortly denticulate in middle at apex. ELYTRA. Ovoid, broadest around its middle, fat on disc. Upper surface leathery and covered with extremely fne and sparse punctures. Elytra costulate. Each elytron bearing 10 costae, alternate ones (3-5-7-9) slightly higher than others. Pseudopleural carina only visible on anterior half (in ♂♂ and ♀♀) from above, because of transversal convexity of elytra. Caudal extension at apex of elytra (mucro) measuring between 2.0 and 4.0 mm. Seen from above, right, parallel: deep suture fanked by two thick, transversely wrinkled ribs, which end in acute angular gap (Fig. 1E). In lateral view, mucro narrow, elongated, progressively narrowed to apex (Fig. 1F) and often bent upwards. Below, mucro grooveshaped, with external edges blurred and bottom transversally wrinkled. ABDOMEN. Ventrites heavily wrinkled-punctate; anal ventrite fnely and densely punctate, transversally impressed on disc, external rim complete and fne. LEGS. Long and slender. Protibiae with internal face sinuous, external one straight in males; similar but less pronounced in females. Outer and posterior face of protibiae and posterior face of mesotibiae superfcially grooved. Mesotibiae almost straight. Tarsi long, slender. SEXUAL DIMORPHISM. In males, no tuft of bristles between ventrites 1 and 2, and presence of light callosity near base of intercoxal process of ventrite 1. This callosity reduced to short transverse strip, with some longitudinal and oblique folds on front side, and coarse transversal wrinkles behind. In lateral view posterior declivity of elytra steeper in females. Mucro longer in males (3.5–4.0 mm) than in females (2.0– 2.5 mm) (Fig. 1E, G). In males, rear edges of median and especially hind tibiae strongly denticulated. In males, metatibiae straight and fat on inner face; less pronounced in females. AEDEAGUS. Parameres widely open, subcordiform, on sternal face (Fig. 1H) with apex triangular. In lateral view (Fig. 1I), parameres very thick and parallel, then abruptly narrowed at apex. Bionomics Most known specimens were collected in antique ruins between April and October. Distribution Libya. This species appears to be endemic to the eastern part of Libya (formerly known as Cyrenaica). Remarks This species belongs to the Blaps gigas species group (sensu Condamine et al. 2011). It is morphologically close to Blaps polychresta Forskål, 1775 from Egypt, from which it differs by: (i) its stronger elytral costulation, especially on the disc; (ii) the absence of the abdominal hair tuft in males (between ventrites 1 and 2); (iii) in males, the presence of a very reduced abdominal callosity located near the base of the intercoxal process of ventrite 1. In Eastern Libya, Blaps effeminata sp. nov. can also be confounded with other species of Blaps with costulate elytra, namely B. bifurcata Solier, 1848, B. doderoi Schuster, 1922, B. nitens laportei Ardoin, 1973, B. rhumeri Seidlitz, 1893, B. sulcifera Seidlitz, 1893 and B. wiedemannii Solier, 1848. In Blaps bifurcata, B. nitens laportei, B. rhumeri and B. sulcifera, the mentum is longitudinaly impressed in the middle, with the front edge emarginated. In Blaps doderoi and B. wiedemannii, the antennae are shorter (reaching only ¾ of pronotal length when directed backwards), the abdominal ventrites are much less densely punctuated, the mucro is shorter and much less narrow, the male abdominal callosity is high and rearward, and males exhibit a yellow hair tuft between ventrites 1 and 2.
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40. Blaps nitiduloides Laurent Soldati & Fabien L. Condamine & Anne-Laure Clamens & Gael J. Kergoat 2017, sp. nov
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Insecta ,Arthropoda ,Blaps ,Blaps nitiduloides ,Tenebrionidae ,Animalia ,Biodiversity ,Taxonomy - Abstract
Blaps nitiduloides Soldati sp. nov. urn:lsid:zoobank.org:act:FF763E9B-8763-45D7-B809-2030C9802FAA Fig. 4A–I Etymology The name of this species refers to its resemblance to Blaps emondi var. nitidula Solier, 1848. Material examined Holotype TUNISIA: ♂, “27.IV.1964, Maktar, TUNISIE, Besnard réc. / MUSEUM PARIS COLL. P. ARDOIN 1978 / Blaps binominata Esc. = caudigera Allard P. ARDOIN DET. 1977 / Blaps nitiduloides m. n. sp. L. Soldati 2015, HOLOTYPE” (MNHN). Allotype TUNISIA: ♀, “Tunis / MUSEUM PARIS COLL. L. BEDEL 1922 / Blaps nitiduloides m. n. sp. L. Soldati 2015, ALLOTYPE” (MNHN). Paratypes ALGERIA: 1 ♂, “Aïn Beida, Constantinois, ALGERIE” (MNHN). TUNISIA: 1 ♂, 1 ♀, “Tunis 9.IX.26 J. Briel” (MNHN); 1 ♂, “27.IV.1964, Maktar, TUNISIE, Besnard réc.” (MNHN); 1 ♂, “Carthage, Tunisie, 10.IX.26, Briel” (MNHN); 1 ♂, 1 ♀, “MUSEUM PARIS TUNIS Belvédère A. WEISS 1902” (MNHN); 1 ♂, “Teboursouk, Tunisie” (MNHN); 1 ♂, “Hadger El Aioun (Tunisie) DE VAULOGER” (MNHN); 1 ♂, “Sbeitla, De Vauloger” (MNHN); 1 ♀, “Tunis: Gassa (91 Augos) / Edmondi / Sammlung J. Daniel / Blaps ♀? torretassoi Koch i. l. 1977 N. Skopin det.” (HNHM); 1 ♂, “Tunisie, Teboursouk” (CS); 1 ♂, “Tunis” (CS); 1 ♂, “Tunisie, Sousse, 10.IV.1997, M. Martinez leg.” (CS); 1 ♀, “27.IV.1964, Maktar, TUNISIE, Besnard réc.” (CS); 1 ♂, 1 ♀, “Tunisia NE, Hammam-Lif, 3–4.IV.1999, lgt. M. Kalabza” (CT); 1 ♀, “Tunisia NW, 20 km N Beja, 19.4.2001, LGT. M. Halada” (CT). Other material (3 specimens, MNHN) ALGERIA: Constantine (Khenichela), Mt Tebessa, 1100 m (MNHN). TUNISIA: Carthago, Radès (MNHN). Description Length: 33.0–42.0 mm; width: 12.5–16.0 mm. Semi-gloss black (Fig. 4A–C). Upper surface covered with extremely fne, sparse and superfcial punctures. HEAD. Covered with fne punctation, more pronounced than on rest of upper body surface. Punctation becomes even denser on clypeus. Clypeus arcuately emarginated, with anterior angles right and protruding frontwards, leaving clypeo-labial membrane partially visible. Clypeo-frontal suture reduced to thin, brilliant line. In middle of frons, just behind eyes, two shallow, circular depressions, sometimes joined by short transverse depression. Mentum transverse, densely and coarsely punctate. Gula microshagreened, matte. Labium deeply notched in middle of front edge. ANTENNAE (Fig. 4D). Short, barely reaching basal third of pronotum when directed backwards. Antennomeres 4–7 particularly short and thick. PRONOTUM. Usually weakly transverse, not wider than long, broadest at or just behind its middle. Disc slightly convex. Sides regularly arcuate, except at posterior angles. Posterior angles obtuse and blunt. Anterior angles rounded. External rim complete on lateral margins, but obliterated in middle of front edge and base. Punctation extremely fne, sometimes barely visible. Carina of anterior foramen of pronotum very thick and neck-shaped. Episternum of prosternum superfcially wrinkled. Prosternal apophysis vertically bent just after anterior coxae, then fat and generally non-protruding posteriorly. ELYTRA. Ovoid, broadest around its middle. Upper surface smooth and covered with extremely fne and sparse punctures; background integument shining. Pseudopleural carina just visible on anterior half from above because of transversal convexity of elytra. Posterior declivity of elytra steep in lateral view. Mucro at apex of elytra measuring between 2.0 and 5.0 mm. Seen from above, deep suture fanked by two thick, coarsely transversely striated ribs, converging in curve toward apex, apex ending in deep and narrow apical gap (Fig. 4E). In lateral view, mucro thick on ¾ of its length, then abruptly sloping toward apex (Fig. 4F). Basin-shaped below, with bottom coarsely striated transversely. ABDOMEN. Ventrites wrinkled; anal ventrite punctate, with light depression on disc, external rim complete. LEGS. Quite short and stout. Protibiae slightly curved. Tarsi short. SEXUAL DIMORPHISM. No tuft of bristles between ventrites 1 and 2, but strong callosity present in middle of intercoxal process of ventrite 1 in males. Mucro longer in males (2.5–5.0 mm) than in females (2.0– 2.2 mm) (Fig. 4E, G). Male mesotibiae curved, slightly grooved on upper face. Male posterior tibiae fexuous and shallowly emarginated in middle of inner side, straight and simple in females. AEDEAGUS. On sternal face (Fig. 4H), parameres open, subparallel for 4/5 of their length, then triangularly narrowed at apex. In lateral view (Fig. 4I), parameres frst subparallel for 9/10 of their length, then obliquely truncated and end in a point. Bionomics The examined material was collected between April and September. Distribution Algeria and Tunisia. This species is currently only known from Tunisia and the Constantine region of Algeria. Remarks This species belongs to the Blaps emondi species group (sensu Condamine et al. 2011). It is morphologically related to B. emondi Solier, 1848 and B. binominata Escalera, 1914. In B. binominata the characteristic mucro is very broad and parallel, with a strong apical gap at a right angle. The male of B. emondi exhibits a tuft of yellow bristles between ventrites 1 and 2, and the abdominal callosity is located near the front edge of the intercoxal process of ventrite 1. It is also worth highlighting that Blaps nitiduloides sp. nov. is not found in sympatry with either B. binominata or B. emondi; the latter occurs in central and western Algeria, north of the ‘Hauts Plateaux’, and northeastern Morocco, whereas the distribution of B. binominata extends from the Oran region to the northeast of Morocco and the Spanish enclave of Melilla.
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41. Blaps intermedia Laurent Soldati & Fabien L. Condamine & Anne-Laure Clamens & Gael J. Kergoat 2017, sp. nov
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Insecta ,Arthropoda ,Blaps ,Tenebrionidae ,Animalia ,Blaps intermedia ,Biodiversity ,Taxonomy - Abstract
Blaps intermedia Soldati sp. nov. urn:lsid:zoobank.org:act:EC3407F9-8A76-4296-AEC5-DFDA9F06CDE1 Fig. 2A–I Etymology The name of this species refers to the fact that it looks like a morphological intermediary between Blaps appendiculata Motschulsky, 1851 and B. debdouensis Obenberger, 1914. Material examined Holotype MOROCCO: ♂, “4.IV.1996, Arhbalou, Moyen Atlas, Maroc, P. Jolivet leg. / Museum Paris coll. P. Ardoin 1978 / Blaps ssp. intermedia m. Soldati det. 1996 / Blaps intermedia m. n. sp., L. Soldati 2015, HOLOTYPE” (MNHN). Paratypes MOROCCO: 1 ♂, “Marocco, Moyen Atlas 6.04.1958 Leg. L. Kocher / Coll. N. Skopin / appendiculata Motsch. 1975 N. Skopin det. / Blaps appendiculata canalicauda subsp. n. / Blaps emondi intermedia n. ssp. PARATYPE” (HNHM); 2 ♂♂, “Dj. Hebbri 18.IV.1926 / Coll. Dr. G. Audéoud” (HNHM); 2 ♂♂, “El Hajeb 19.IV.1926” (HNHM); 1 ♂, “Moyen Atlas, route P21 bif.r.3206 21.7.69 / Marokko O. Stemmler / Blaps tingitana All. Dr. Z. Kaszab det. 1973” (HNHM); 3 ♂♂, same data as holotype (MNHN); 1 ♂, “14.V.1969, Azrou, Moyen Atlas, Durand” (MNHN); 1 ♂, “20.IV.1965, Almis du Guigou p. Boulemane, Moyen Atlas, P. Jolivet” (MHNH); 1 ♂, “Azrou” (MNHN); 1 ♂, “20.IV.1965, Boulemane, Moyen Atlas, P. Jolivet” (MNHN); 1 ♂, “29.V.1968, 1800 m, Djebel Hebri, Moyen Atlas, Maroc, D. Seiler” (MNHN); 1 ♂, “Moyen Atlas, 1960 m, Djebel Hebri, Maroc, 30.IV.1970” (MNHN); 1 ♂, “Timhadit, 1900 m, Alluaud 1881” (MNHN); 1 ♂, 1 ♀, “rte entre Ajabou et Azrou (stat° 21, 1900 m, 33°15′ N / 05°14′ WW)” (MHNL); 1 ♂, “Aknoul 11/10/1936” (CS); 1 ♂, 2 ♀♀, “Jbel Tichtrar, Moy. Atl. 6.1973, Maroc, H. Fongond” (CS); 1 ♂, “Tizi Abekhnanes, Jbel Tichtrar, Maroc Moy. Atl. 27.VI.1973, H. Fongond” (CS); 1 ♂, “Forêt de Jaaba 11 km W. Ifrane Moyen Atlas Maroc 30.V.08” (CT); 1 ♂, “Maroc m 2000, Moyen Atlas, Aguelmame Sidi Ali, 20.VI.1998, P. Leo” (CMF); 1 ♀, “Aguelm. Sidi Ali,Moy. Alt., Maroc, 6.IV.1980, H. Fongond” (CMF). Other material (50 specimens, MNHN) MOROCCO: Aknoul, Almis du Guigou, Azerzou (SE of Khenifra) (MNHN); Azrou, Arhbalou-n- Serdane, Bekrite, 1950 m (Middle Atlas) (MNHN); Berkane (MNHN); Dayet Ifrah (MNHN); El Hadjeb (MNHN); Ifrane (MNHN); Zaouïa de l’Oued Ifrane (MNHN); Djebel Hebri (MNHN); Guercif (MNHN); Mechrâ Safsaf (near Berkane) (MNHN); Taza (MNHN); Tendrara (MNHN); Timhadit, Zad, 2100 m (MNHN). Description Length: 32.0–42.0 mm; width: 12.0–16.0 mm. Dull black. Oval-oblong, elongated (Fig. 2A–C). Upper surface covered with very fne and sparse punctures, progressively denser from elytra to head. HEAD. Clypeus arcuately emarginate, with lateral angles protruding frontwards, clypeo-labial membrane not visible. Clypeo-frontal suture reduced to thin, superfcially engraved glossy line. Middle of frons (disc) with faint, generally obliterated, transverse depression. Mentum transverse, punctate and slightly impressed in middle of anterior edge. Gula microshagreened, dull. Labium triangularly emarginated in middle of front edge. ANTENNAE. Medium size, reaching at most ¾ of pronotal length when directed backwards (Fig. 2D). PRONOTUM. Broadest in its middle, sides distinctly sinuated before posterior angles and arcuatly narrowed frontwards. Anterior angles rounded. Posterior angles sub-right and blunt. External rim fne, complete on lateral margins, but obliterated in middle of front edge and base. Disc convex. Punctuation fne, uniform. Carina of pronotum anterior foramen thick and neck-shaped below. Episternum of prosternum shallowly wrinkled near coxae and obliterate toward margins. Prosternal apophysis vertically bent just behind anterior coxae, then very slightly denticulate in middle at apex. ELYTRA. Ovoid, broadest around its middle, fat on disc. Upper surface leathery, covered with extremely fne and sparse punctures. Pseudopleural carina only visible from above because of tranversal convexity of elytra. Caudal extension at apex of elytra (mucro) measuring between 1.5 and 3.5 mm. Seen from above, mucro triangularly narrowed; deep suture fanked by two thick, coarsely transversely wrinkled ribs, converging toward apex, which ends in acute angular gap (Fig. 2E). In lateral view, mucro regularly narrowed up to apex, with lower face sub-horizontal (Fig. 2F); below, regularly but not deeply excavated, with sharp external edges and bottom transversally wrinkled. ABDOMEN. Ventrites wrinkled-punctate; anal ventrite fnely punctate, denser along external rim, external rim complete and fne. LEGS. Mesotibiae curved. Inner face of pro-and mesotibiae superfcially grooved. SEXUAL DIMORPHISM. Yellow tuft of bristles between ventrites 1 and 2, and strong callosity between middle and front edge of intercoxal process of ventrite 1. Callosity directed backwards, bifd on top (when not eroded), with some longitudinal and oblique folds on front side, and coarse, transversal wrinkles hindwards. Pseudopleural carina of elytra only visible on anterior half in males, visible on anterior third in females. In lateral view, posterior declivity of elytra steep in males and subvertical in females. Mucro longer in males (2.0–3.5 mm) than in females (1.5–2.0 mm) (Fig. 2E, G). Male protibiae slightly fexuous; straight in females. In males, rear edges of median and especially hind tibiae strongly denticulate. Male metatibiae fexuous and shallowly emarginated on inner face; female metatibiae straight and simple. AEDEAGUS. Parameres open on sternal face (Fig. 2H), with apex acuminate. In lateral view (Fig. 2I), parameres thick and convex at base, then narrowed almost in straight line up to apex. Bionomics The examined material was collected between April and October. Distribution Morocco: Middle Atlas mountain range and further north, up to the surroundings of Taza and Aknoul. Remarks This species belongs to the Blaps emondi species group (sensu Condamine et al. 2011). Blaps intermedia sp. nov. is morphologically very close to B. debdouensis, and the aedeagus is the most reliable character to the two species: in B. intermedia sp. nov. the parameres are more extended laterally and appear infated, whereas they are parallel and gutter-shaped in B. debdouensis. However, it is worth underlining that the aedeagus is often distorted by dehydration because of the very thin lateral tegument of the parameres. In the case of isolated females, the geographic distribution is a good criterion to distinguish females of Blaps intermedia sp. nov. from females of B. debdouensis.
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42. Blaps teocchii Laurent Soldati & Fabien L. Condamine & Anne-Laure Clamens & Gael J. Kergoat 2017, sp. nov
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Blaps teocchii ,Insecta ,Arthropoda ,Blaps ,Tenebrionidae ,Animalia ,Biodiversity ,Taxonomy - Abstract
Blaps teocchii Soldati sp. nov. urn:lsid:zoobank.org:act:BBAE8764-F336-4941-9657-009531E258BC Fig. 5A–I Etymology This species is named in honour of Pierre Teocchi, cerambycid specialist, to whom one of us (L. Soldati) owes having become an entomologist. Material examined Holotype TUNISIA: ♂, “Zaghouan, 20–22.V.1995, M. Ouda leg. / Blaps teocchii m. n. sp. L. Soldati 2015, HOLOTYPE” (MNHN). Allotype TUNISIA: ♀, same data as holotype (MNHN). Paratypes TUNISIA: 1 ♂, same data as holotype (CS); 1 ♂, same data as holotype (CT). Description Length: 31.0–33.0 mm; width: 11.0–13.0 mm. Semi-gloss black. Oval-oblong (Fig. 5A–C). Upper surface covered with very fne, sparse and superfcial punctures, denser on head and pronotum. HEAD. Clypeus arcuately emarginated, with lateral angles right and protruding frontwards, leaving clypeolabial membrane partially visible. Clypeo-frontal suture reduced to thin gloss line. Middle of frons (disc) with faint transverse depression. Mentum transverse, coarsely punctate and slightly impressed in middle of anterior edge. Gula microshagreened, matte. Labium deeply notched in middle of front edge. ANTENNAE. Slender, barely reaching pronotal base when directed backwards (Fig. 5D). PRONOTUM. Broadest in its middle, with sides narrowed almost in straight line posteriorly and arcuately towards front. Anterior angles rounded. Posterior angles obtuse and blunt. External rim fne, complete on lateral margins but obliterated in middle of front edge and base. Disc slightly convex. Punctation fne, uniform, as on head. Carina of anterior foramen of pronotum thick and neck-shaped below. Episternum of prosternum superfcially wrinkled. Prosternal apophysis vertically bent just behind anterior coxae, then fat and non-protruding posteriorly. ELYTRA. Ovoid, broadest around its middle, depressed on disc. Upper surface smooth and covered with very fne and sparse punctures; background integument semi-gloss. Caudal extension at apex of elytra (mucro) measuring between 1.0 and 2.5 mm. Seen from above, mucro almost subparallel; deep suture fanked by two thick, coarsely transversely wrinkled ribs, slightly converging toward apex, apex ending in narrow apical gap (Fig. 5E). In lateral view, mucro regularly sloping up to apex (Fig. 5F). Seen from below, mucro regularly excavated, with sharp external edges and bottom transversally wrinkled. ABDOMEN. Ventrites wrinkled-punctate; anal ventrite densely punctate, with external rim complete and quite thick. LEGS. Protibiae long and fexuous. Mesotibiae curved. Inner face of pro- and mesotibiae widely grooved. Tarsi elongated and stout; claws long. Hind tarsi as long as ¾ of length of corresponding tibiae. SEXUAL DIMORPHISM. No yellow tuft of bristles between ventrites 1 and 2, but strong callosity present between middle and anterior ridge of intercoxal process of ventrite 1 and directed backwards, with some oblique folds on front side. Elytra slightly larger than pronotum in males. Pseudopleural carina only visible on anterior half from above in males, or on anterior third in females, because of transversal convexity of elytra. In lateral view, posterior declivity of elytra steeper in females. Mucro longer in males (2.5 mm) than in females (1.0 mm) (Fig. 5E, G). Rear edges of median and especially hind tibiae strongly denticulate in males. Male metatibiae fexuous and shallowly emarginated on inner face at middle third; straight and simple in females. AEDEAGUS. Parameres bottleneck-shaped on sternal face (Fig. 5H), with apex acuminate. In lateral view (Fig. 5I), parameres thick and convex at base, then narrowed almost in straight line up to apex. Bionomics Unknown. Distribution Tunisia. So far known only from the type locality of Zaghouan in Tunisia. Remarks This species belongs to the Blaps emondi species group (sensu Condamine et al. 2011). It is morphologically very similar to B. maldesi sp. nov. from Tunisia (see above for more information).
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43. Blaps maldesi Laurent Soldati & Fabien L. Condamine & Anne-Laure Clamens & Gael J. Kergoat 2017, sp. nov
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Laurent Soldati, Fabien L. Condamine, Anne-Laure Clamens, and Gael J. Kergoat
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Coleoptera ,Insecta ,Blaps maldesi ,Arthropoda ,Blaps ,Tenebrionidae ,Animalia ,Biodiversity ,Taxonomy - Abstract
Blaps maldesi Soldati sp. nov. urn:lsid:zoobank.org:act:ECAD95F0-9469-4AA3-824D-960F20F3DD15 Fig. 3A–I Etymology This species is named in honor of Jean-Michel Maldes, friend and colleague, entomologist at the CIRAD, specialist in Asilidae (Diptera), who discovered this new species of Blaps while prospecting in the Aures mountain range. Material examined Holotype ALGERIA: ♂, “Algérie, Mif Aurès, S’Gag, 1900 m, 19.VI.1981 / ALGERIE J. M. MALDES / Blaps maldesi m. n. sp., L. Soldati 2015, HOLOTYPE” (MNHN). Allotype ALGERIA: ♀, “S’Gag, 2000 m, Ras Gueddelane, Mif des Aurès, 18.VI.1981 / ALGERIE J. M. MALDES / Blaps maldesi m. n. sp., L. Soldati 2015” (MNHN). Paratype ALGERIA: 1 ♂, “Sgag (Aurès) / Blaps maldesi m. n. sp., L. Soldati 2015, PARATYPE” (CS). Description Length: 29.0–35.0 mm; width: 10.0–15.0 mm. Dull to semi-gloss black. Oval-oblong (Fig. 3A–C). Upper surface covered with very fne and sparse punctures, denser on head and pronotum. HEAD. Clypeus arcuately emarginated, with lateral angles right and protruding frontwards, leaving clypeo-labial membrane partially visible. Clypeo-frontal suture reduced to thin, superfcially engraved gloss line. Middle of frons (disc) with faint transverse depression. Mentum transverse, punctate and slightly impressed in middle of anterior edge. Gula microshagreened, matte. Labium deeply notched in middle of front edge. ANTENNAE. Medium size, not reaching pronotal base when directed backwards (Fig. 3D). PRONOTUM. Broadest in its middle, sides narrowed almost in straight line posteriorly, sinuated before posterior angles and arcuately narrowed toward front. Anterior angles rounded. Posterior angles obtuse and blunt. External rim fne, complete on lateral margins, but briefy obliterated in middle of front edge and base. Disc quite convex. Punctation fne, uniform. Carina of anterior foramen of pronotum thick and neck-shaped below. Episternum of prosternum wrinkled near coxae and obliterate toward sides. Prosternal apophysis vertically bent just behind anterior coxae, then fat and non-protruding posteriorly. ELYTRA. Ovoid, broadest around its middle, fat on disc. Upper surface leathery and covered with extremely fne and sparse punctures. Pseudopleural carina only visible on anterior half from above because of transversal convexity of elytra. Caudal extension at apex of elytra (mucro) measuring less than 2.0 mm. Deep suture of mucro fanked by two thick, coarsely transversely wrinkled ribs, converging toward apex, apex ends in narrow apical gap (Fig. 3E). In lateral view, mucro regularly sloping up to apex (Fig. 3F). Below, mucro regularly excavated, with sharp external edges and bottom transversally wrinkled. ABDOMEN. Ventrites wrinkled-punctate; anal ventrite densely punctate, especially along external rim, external rim complete and quite thick. In one case (paratype), external rim of anal ventrite shortly interrupted in middle of apex. LEGS. Protibiae long and fexuous, especially in males. Mesotibiae curved. Inner face of pro- and mesotibiae widely grooved. Tarsi elongated; claws long. Hind tarsi approximately as long as one half of length of corresponding tibiae. SEXUAL DIMORPHISM. Yellow tuft of bristles between ventrites 1 and 2, and a callosity in middle of intercoxal process of ventrite 1. Callosity directed backwards, with some oblique folds on front side. Elytra slightly larger than pronotum in males. In lateral view, posterior declivity of elytra steep in males and subvertical in females. Mucro longer in males (1.5–2.0 mm) than in females (0.5 mm) (Fig. 3E, G). Seem from above, mucro triangularly narrowed in males and acuminate in females. Rear edges of median and especially hind tibiae strongly denticulate in males. Male metatibiae fexuous and shallowly emarginated on inner face; female metatibiae straight and simple. AEDEAGUS. Parameres bottleneck-shaped on sternal face (Fig. 3H), with apex acuminate. In lateral view (Fig. 3I), parameres thick and convex at base, then narrowed almost in a straight line up to apex. Bionomics The three known specimens were taken in the cedar forest of S’Gag (Algeria). Distribution Algeria. This species is currently known only from the type locality of S’Gag in the Aurès region. Remarks This species belongs to the Blaps emondi species group (sensu Condamine et al. 2011). It is morphologically most similar to B. teocchii sp. nov. from Tunisia. Blaps maldesi sp. nov. is most clearly separated from B. teocchii sp. nov. by having shorter antennae and tarsi, a wider pronotum and by the presence of a tuft of yellow bristles between abdominal ventrites 1 and 2. Until now, these two species have passed unnoticed in the collections because they superfcially look like small specimens of other species of the emondi group, especially when the specimens are prepared in the old-fashioned way, with the legs tucked under the body. Compared to other species in the emondi group, these two species are characterized by the following combination of characters: slender legs; long and fexuous fore-tibiae, with inferior face distinctly grooved; tarsi long; and bottleneck-shaped parameres of aedeagus.
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44. A first higher-level time-calibrated phylogeny of antlions (Neuroptera: Myrmeleontidae)
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Anne-Laure Clamens, Gael J. Kergoat, Olivier Béthoux, Bruno Michel, Fabien L. Condamine, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Centre de recherche sur la Paléobiodiversité et les Paléoenvironnements (CR2P), Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie (Paris 6), Centre National de la Recherche Scientifique (CNRS), Sorbonne Universités, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Université de Montpellier (UM), Institut de Recherche pour le Développement (IRD [France-Ouest]), École pratique des hautes études (EPHE), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre National de la Recherche Scientifique (CNRS)-Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC), Université Pierre et Marie Curie - Paris 6 (UPMC), Sorbonne Université (SU), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Université Paris sciences et lettres (PSL), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, and Université Pierre et Marie Curie - Paris 6 (UPMC)-Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS)
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0106 biological sciences ,Paraphyly ,Phylogénie ,Insecta ,Time Factors ,[SDV]Life Sciences [q-bio] ,ADN ,Early Cretaceous ,Évolution ,01 natural sciences ,Monophyly ,Marqueur génétique ,Clade ,Myrmeleontiformia ,Phylogeny ,Likelihood Functions ,Phylogenetic tree ,Fossils ,U10 - Informatique, mathématiques et statistiques ,Neuroptera ,Fossile ,Classification ,Fossil calibrations ,Calibration ,Molecular dating ,Aile ,Modèle mathématique ,010607 zoology ,Zoology ,Biology ,Stilbopteryginae ,010603 evolutionary biology ,Phylogenetics ,Genetics ,Animals ,Higher-level phylogeny ,Myrmeleontidae ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,L60 - Taxonomie et géographie animales ,Biologie moléculaire ,Taxonomie ,Anatomie animale ,biology.organism_classification ,Paléontologie ,Antlion - Abstract
In this study, we reconstruct the first time-calibrated phylogeny of the iconic antlion family, the Myrmeleontidae (Neuroptera: Myrmeleontiformia). We use maximum likelihood and Bayesian inference to analyse a molecular dataset based on seven mitochondrial and nuclear gene markers. The dataset encompasses 106 species of Neuroptera, including 94 antlion species. The resulting phylogenetic framework provides support for a myrmeleontid classification distinguishing four subfamilies: Acanthaclisinae, Myrmeleontinae, Palparinae, and Stilbopteryginae. Within Myrmeleontinae, Myrmecaelurini and Nemoleontini are recovered as monophyletic clades; Gepini also appears as a valid tribe, distinct from Myrmecaelurini whereas Myrmecaelurini and Nesoleontini on one hand and Brachynemurini and Dendroleontini on the other hand, appear closely related. Some preliminary information related to generic and specific levels are also implied from our results, such as the paraphyly of several genera. Dating analyses based on thoroughly evaluated fossil calibrations indicate that the antlion family likely originated in the Cretaceous, between 135 and 138 million years ago (depending on the set of fossil calibrations), and that all higher-level lineages appeared during the Early Cretaceous. This first phylogenetic hypothesis will provide a valuable basis to further expand the taxonomic coverage and molecular sampling, and to lay the foundations of future systematic revisions.
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45. Documenting tenebrionid diversity: progress on Blaps Fabricius (Coleoptera, Tenebrionidae, Tenebrioninae, Blaptini) systematics, with the description of five new species
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Gael J. Kergoat, Anne-Laure Clamens, Fabien L. Condamine, Laurent Soldati, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, Université de Montpellier (UM), Université Paris sciences et lettres (PSL), Institut de Recherche pour le Développement (IRD [France-Ouest]), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), and École Pratique des Hautes Études (EPHE)
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0106 biological sciences ,Systematics ,Paraphyly ,[SDV]Life Sciences [q-bio] ,Zoology ,010501 environmental sciences ,Subspecies ,Blaps ,molecular phylogenetics ,morphology ,taxonomy ,Tenebrionidae ,010603 evolutionary biology ,01 natural sciences ,Genus ,Tenebrioninae ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,biology ,Botany ,biology.organism_classification ,QL1-991 ,QK1-989 ,Molecular phylogenetics ,Taxonomy (biology) ,Subgenus - Abstract
With about 250 species, the genus Blaps Fabricius, 1775 is one of the most diverse genera of darkling beetles (Coleoptera: Tenebrionidae: Tenebrioninae: Blaptini: Blaptina). In this study, we provide new insights on the evolutionary relationships of Blaps species using a combined molecular and morphological dataset encompassing 69 distinct Blaps species and subspecies (105 specimens in total, all belonging to the subgenus Blaps), four other representatives of the tribe Blaptini (from the subtribes Gnaptorina, Gnaptorinina and Prosodina) and 12 outgroup species. Five new species of Blaps are also described within the subgenus Blaps: B. effeminata sp. nov. from Libya, B. intermedia sp. nov. from Morocco, B. maldesi sp. nov. from Algeria, B. nitiduloides sp. nov. from Algeria and Tunisia and B. teocchii sp. nov. from Tunisia. The results of the phylogenetic analyses indicate that the genus Blaps is likely paraphyletic; the two highlighted clades are morphologically distinct and correspond to groups previously referred to as sections (I and II) within the subgenus Blaps. This suggests the need for more phylogenetic studies in order to clarify the status of the various genera and subgenera belonging to the tribe Blaptini.
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46. Phylogenetic analysis and systematics of the Acrapex unicolora Hampson species complex (Lepidoptera, Noctuidae, Noctuinae, Apameini), with the description of five new species from the Afrotropics
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Rose Ndemah, Gael J. Kergoat, Bruno Le Ru, Boaz K. Musyoka, Beatrice Pallangyo, George Ong’amo, Gilson Chipabika, Mohamedi Njaku, Grégoire Bani, Richard Molo, Onésime Mubenga, Claire Capdevielle-Dulac, Évolution, génomes, comportement et écologie (EGCE), Université Paris-Sud - Paris 11 (UP11)-IRD-Centre National de la Recherche Scientifique (CNRS), UMR 247, Institut de Recherche pour le Développement (IRD [France-Ouest]), Biocontrol Programme, Faculté des Sciences agronomiques, Université du Burundi, International Institute of Tropical Agriculture (IITA-DRC), International Institute of Tropical Agriculture [Nigeria] (IITA), Consultative Group on International Agricultural Research [CGIAR] (CGIAR)-Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Centre de recherches agronomiques de Loudima (CRAL), Namulonge Agricultural and Animal Production Research Institute (NAARI), Sch. Biol. Sci. Coll. Phys. & Biol. Sci., University of Nairobi, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), UMR Lab Evolut. Genomes Speciat., Centre National de la Recherche Scientifique (CNRS), Université Paris Sud (Paris 11), and International Institute of Tropical Agriculture (IITA)
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0106 biological sciences ,Systematics ,Species complex ,Acrapex ,[SDV]Life Sciences [q-bio] ,010607 zoology ,Sesamiina ,Apameini ,01 natural sciences ,Afrotropical Region ,Genus ,Botany ,Cymbopogon schoenanthus ,Ecology, Evolution, Behavior and Systematics ,Chrysopogon ,biology ,biology.organism_classification ,Noctuinae ,010602 entomology ,QL1-991 ,QK1-989 ,Noctuidae ,Taxonomy (biology) ,Zoology - Abstract
Ten morphologically similar species of Acrapex Hampson, 1891 (Lepidoptera, Noctuidae, Noctuinae, Apameini) from Central and Eastern Africa are reviewed, including five new species: Acrapex kafula le Ru sp. nov., A. kavumba le Ru sp. nov., A. kiakouama le Ru sp. nov., A. miscantha le Ru sp. nov. and A. simillima le Ru sp. nov. Evidence is provided to transfer the monotypic genus Poecopa Bowden, 1956 to the genus Acrapex . Host plants of five species are recorded, some of them for the first time. Acrapex kavumba sp. nov., A. miscantha sp. nov. and A. simillima sp. nov. were found on one host plant each. Acrapex mediopuncta , previously reported in West Africa from Pennisetum purpureum Schumach. , Rottboellia compressa L., Setaria megaphylla (Steud) Dur. & Schinz. and Sorghum arundinaceum (Desv.) Stapf, was only found from S. megaphylla in Central Africa. Larvae of Acrapex unicolora were collected on Andropogon gayanus Kunth, Chrysopogon zizanoides (L.) Roberty, Cymbopogon schoenanthus subsp. proximus (Hochst. ex A.Rich.) Maire & Weller, Cymbopogon pospischiilii (K.Schum.) C.E.Hubb. , Hyparrhenia diplandra (Hack.) Stapf and Setaria sphacelata (Schumach.) Moss. We also conducted molecular phylogenetic analyses (using maximum likelihood) and molecular species delimitation analyses on a comprehensive sample of 61 specimens belonging to eight of the studied species. Molecular phylogenetic analyses provided additional evidence of the synonymy of Acrapex and Poecopa , whereas molecular species delimitation analyses support the validity of the five newly described species and unravel another potential new species, only collected in the larval stage.
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47. Phylogeny and systematics of the Acrapex apicestriata (Bethune-Baker, 1911) species complex (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina) with the description of eight new species from the Afrotropics
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Claire Capdevielle-Dulac, Michel Sezonlin, Gael J. Kergoat, George Ong’amo, Yoseph Assefa, Bruno Le Ru, Boaz K. Musyoka, Beatrice Pallangyo, Mohamedi Njaku, Muluken Goftishu, International Centre of Insect Physiology and Ecology (ICIPE), Institut de Recherche pour le Développement (IRD), Ministry of Agriculture, Food Security and Cooperatives, College of Health and Medical Sciences [Harar, Ethiopie], Haramaya University (HU), University of Swaziland, Université d'Abomey-Calavi, University of Abomey Calavi (UAC), University of Nairobi (UoN), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
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0106 biological sciences ,0301 basic medicine ,Systematics ,Species complex ,[SDV]Life Sciences [q-bio] ,Apameini ,010603 evolutionary biology ,01 natural sciences ,Lepidoptera genitalia ,molecular phylogenetics ,03 medical and health sciences ,taxonomy ,Botany ,morphology ,Ecology, Evolution, Behavior and Systematics ,biology ,15. Life on land ,biology.organism_classification ,Noctuinae ,030104 developmental biology ,Insect Science ,Molecular phylogenetics ,[SDE]Environmental Sciences ,Noctuidae ,Taxonomy (biology) ,Host-plants - Abstract
International audience; Twelve morphologically similar species of Acrapex Hampson 1894, (Lepidoptera, Noctuidae, Noctuinae, Apameini, Sesamiina), from Western, Central and Eastern Africa are reviewed. Eight of these species are new to science and are described: Acrapex akunamatatan. sp. and A. incrassata n. sp. from Kenya; A. gracilis n. sp., A. iringa n. sp., A. lukumbura n. sp. and A. rungwe n. sp. from Tanzania; A. soyema n. sp. from Ethiopia; and A. zoutoi n. sp. from Benin. All 12 species belong to a species complex that we hereby define as the Acrapex apicestriata group. Host-plants for three of the new species are recorded: Setaria incrassata (Hochst.) Hack. for Acrapex incrassata; Cymbopogon pospishilii (K. Schum.) C.E. Hubb. for A. rungwe; and Andropogon perligulatus Stapf. for A. zoutoi. We also conducted molecular phylogenetic analyses (using maximum likelihood and Bayesian inference) on a six gene multimarker molecular dataset (four mitochondrial and two nuclear gene fragments; 4581 nucleotides in length) consisting of 15 Acrapex species (including seven species from the apicestriata group) and four outgroups species from the subtribe Sesamiina (from genera Busseola Thurau 1904, Sciomesa Tams & Bowden 1953, Pirateolea Moyal, Le Ru, Conlong, Cugala, Defabachew, Matama-Kauma, Pallangyo & Van den Berg 2010 and Sesamia Boisduval & Guenee 1852). Both maximum likelihood and Bayesian inference analyses yield a similar and well-supported topology, which supports the monophyly of the apicestriata group.
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48. Evolution of Plant–Insect Interactions
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Emmanuelle Jousselin, Andrea S. Meseguer, and Gael J. Kergoat
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0106 biological sciences ,0301 basic medicine ,Herbivore ,Phylogenetic tree ,Pollination ,Ecology ,media_common.quotation_subject ,Insect ,Biology ,Macroevolution ,Diversification (marketing strategy) ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Phylogenetics ,Coevolution ,media_common - Abstract
In this study, we review recent works in the phylogenetic investigations of plant–insect interactions. Thanks to the development of novel methodological approaches and the ever-increasing availability of informative molecular markers, it is indeed now possible to test more and more complex evolutionary scenarios. Here, we are limiting our review to studies on herbivorous insects (excluding work on the evolution of pollinating insects), and we provide an overview of the variety of approaches employed to answer fundamental questions in plant/insect evolution. More specifically, our review addresses studies that have focused on the following: (1) reconstructing the evolutionary history of the associations with plants; (2) inferring the diversification dynamics of herbivorous insects and (3) studying the biogeographic history of herbivorous insects. Finally, we attempt to decipher whether general trends in the evolution of plant–insect interactions have emerged from these studies and highlight the most promising perspectives in this field.
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49. Molecular phylogenetics and definition of the Acrapex minima Janse group (Lepidoptera, Noctuidae, Apameini, Sesamiina) with the description of four new species from the Afrotropics
- Author
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Gael J. Kergoat, Richard Molo, Claire Capdevielle-Dulac, Muluken Goftishu, Rose Ndemah, Bruno Le Ru, Boaz K. Musyoka, George Ong’amo, D. E. Conlong, Yoseph Assefa, Gilson Chipabika, Institut de Recherche pour le Développement (IRD), International Centre of Insect Physiology and Ecology (ICIPE), College of Health and Medical Sciences [Harar, Ethiopie], Haramaya University (HU), University of Swaziland, International Institute of Tropical Agriculture (IITA-Cameroon), International Institute of Tropical Agriculture [Nigeria] (IITA), Consultative Group on International Agricultural Research [CGIAR] (CGIAR)-Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Namulonge Agricultural and Animal Production Research Institute (NAARI), Zambia Agriculture Research Institute, Partenaires INRAE, Univ Kwazulu Natal, Sch Biol & Conservat Sci, Private Bag X01, Pietermaritzburg, South Africa, South African Sugarcane Res Inst, Crop Biol Resource Ctr, ZA-4300 Mt Edgecombe, South Africa, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
- Subjects
0106 biological sciences ,0301 basic medicine ,Systematics ,Species complex ,Acrapex ,[SDV]Life Sciences [q-bio] ,010603 evolutionary biology ,01 natural sciences ,Hyparrhenia hirta ,Lepidoptera genitalia ,molecular phylogenetics ,03 medical and health sciences ,taxonomy ,Botany ,systematics ,Ecology, Evolution, Behavior and Systematics ,biology ,biology.organism_classification ,Noctuinae ,030104 developmental biology ,Insect Science ,host plants ,Molecular phylogenetics ,Noctuidae ,Taxonomy (biology) - Abstract
International audience; Five morphologically similar species of Acrapex Hampson (Lepidoptera, Noctuidae, Noctuinae, Apameini), from sub-Saharan Africa are reviewed, including four new species that are described: Acrapex mondogeneta Le Ru n. sp., A. mubale Le Ru n. sp., A. robe Le Ru n. sp. and A. rubona Le Ru n. sp. These five species belong to a species complex that we hereby define as the Acrapex minima group. Host plants of three species are recorded; Acrapex minima is recorded for the first time on a host plant, Digitaria natalensis Stent; A. mondogeneta on Hyparrhenia hirta (L.) Stapf and A. rubona on Imperata cylindrica (L.) P. Beauv. We also conducted molecular phylogenetics (using both Bayesian inference and maximum likelihood) and molecular species delimitation analyses (Poisson tree processes) on a six gene multi-marker dataset (four mitochondrial and two nuclear gene fragments; 4582 nucleotides in length) of 42 specimens and 22 species, including 23 specimens from the Acrapex minima group. The results of the corresponding analyses support the monophyly of the group and the species status of the newly described taxa.
- Published
- 2017
- Full Text
- View/download PDF
50. Higher level molecular phylogeny of darkling beetles (Coleoptera: Tenebrionidae)
- Author
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Roula Jabbour-Zahab, Gael J. Kergoat, Fabien L. Condamine, Gwenaëlle Genson, Laurent Soldati, Patrice Bouchard, Hervé Jourdan, and Anne-Laure Clamens
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0106 biological sciences ,Systematics ,Paraphyly ,0303 health sciences ,Phylogenetic tree ,biology ,Ecology ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Monophyly ,Phylogenetics ,Evolutionary biology ,Insect Science ,Polyphyly ,Molecular phylogenetics ,Tenebrioninae ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
Insect diversity represents about 60% of the estimated million-and-a-half described eukaryotic species worldwide, yet comprehensive and well-resolved intra-ordinal phylogenies are still lacking for the majority of insect groups. This is the case especially for the most species-rich insect group, the beetles (Coleoptera), a group for which less than 4% of the known species have had their DNA sequenced. In this study, we reconstruct the first higher level phylogeny based on DNA sequence data for the species-rich darkling beetles, a family comprising at least 20 000 species. Although amongst all families of beetles Tenebrionidae ranks seventh in terms of species diversity, the lack of knowledge on the phylogeny and systematics of the group is such that its monophyly has been questioned (not to mention those of the subfamilies and tribes contained within it). We investigate the evolutionary history of Tenebrionidae using multiple phylogenetic inference methods (Bayesian inference, maximum likelihood and parsimony) to analyse a dataset consisting of eight gene fragments across 404 taxa (including 250 tenebrionid species). Although the resulting phylogenetic framework only encompasses a fraction of the known tenebrionid diversity, it provides important information on their systematics and evolution. Whatever the methods used, our results provide strong support for the monophyly of the family, and highlight the likely paraphyletic or polyphyletic nature of several important tenebrionid subfamilies and tribes, notably the polyphyletic subfamilies Diaperinae and Tenebrioninae that clearly require substantial revision in the future. Some interesting associations in several groups are also revealed by the phylogenetic analyses, such as the pairing of Aphtora Bates with Phrenapatinae. Furthermore this study advances our knowledge of the evolution of the group, providing novel insights into much-debated theories, such as the apparent relict distribution of the tribe Elenophorini.
- Published
- 2014
- Full Text
- View/download PDF
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