89 results on '"Gümüş S"'
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2. Laser welding of copper with stellite 6 powder and investigation using LIBS technique
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Genc Oztoprak, B., Akman, E., Hanon, M.M., Günes, M., Gümüs, S., Kacar, E., Gundogdu, O., Zeren, M., and Demir, A.
- Published
- 2013
- Full Text
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3. Determination of the Microstructure of Powder Tool Steels by Different Etching Techniques
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Atapek, Ş. H., Polat, Ş., Gümüş, S., Erişir, E., and Altuğ, G. S.
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- 2014
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4. Effect of matrix toughness and grain morphology on fracture of steels
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Atapek, Ş. H., Gümüş, S., and Polat, Ş.
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- 2013
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5. Calculation of Two-Center Nuclear Attraction Integrals over Integer and Noninteger n-Slater Type Orbitals in Nonlined-Up Coordinate Systems
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Özdoğan, T., Gümüş, S., and Kara, M.
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- 2003
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6. Direct, cumulative and residual effect of P-fertilizer applied at different times to wheat and barley under the dryland conditions of Turkey
- Author
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Firat, B., Gümüs, S., Horst, W. J., editor, Schenk, M. K., editor, Bürkert, A., editor, Claassen, N., editor, Flessa, H., editor, Frommer, W. B., editor, Goldbach, H., editor, Olfs, H. -W., editor, Römheld, V., editor, Sattelmacher, B., editor, Schmidhalter, U., editor, Schubert, S., editor, v. Wirén, N., editor, and Wittenmayer, L., editor
- Published
- 2001
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- View/download PDF
7. Synthesis of low-VOC unsaturated polyester coatings for electrical insulation
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Gümüş Selinay, Aksoy Kaan, and Aytaç Ayşe
- Subjects
electrical insulation ,upe ,coatings ,low voc ,insulating varnish ,Polymers and polymer manufacture ,TP1080-1185 - Abstract
The objective of this research is to develop an unsaturated polyester (UPE) varnish with low-volatile organic compounds (VOCs). Instead of using a solvent, the solvent-free varnish incorporates a reactive diluent to reduce viscosity and a catalyst to accelerate curing. To achieve this, vinyl toluene and 1,4-butanediol dimethacrylate were employed as curing agents. Sebacic acid (SA) and fumaric acid were utilized to create UPE coatings for electrical insulation. Various tests and measurements were made to evaluate the physical, thermal, and chemical structure determination, and electrical properties of the synthesized resins. Given the increasing demand for eco-friendly and low-VOC products, gas chromatography was employed to determine VOC levels. The study demonstrated that the electrical volume resistance of cross-linked coatings containing FA was 1.58 × 1015 Ω·cm, whereas coatings containing SA exhibited a measurement of 6.96 × 1011 Ω·cm. VOC levels in the UPE coatings were found to be in the range of 2.10–3.60%.
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- 2023
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8. Laparoscopic management of hydatid cyst of the liver
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Yağmur, Y, Akbulut, S, Gümüş, S, Babür, M, and Can, M A
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Hydatid cyst of liver, laparoscopic treatment ,Hydatid cyst of liver ,laparoscopic treatment - Abstract
Background: Hydatid liver disease management has evolved from traditional operative approaches to the increasing application of laparoscopic treatments. We aimed to prospectively assess the early outcomes of laparoscopic treatment at our institution.Patients and methods: Forty-four patients with hydatid disease of liver were screened with ultrasonography and computed tomography of the abdomen to exclude Gharbi type V cysts. The distribution of cyst sizes was: 1–4 cm, 10; 5–10 cm, 24; 10–15 cm, 8; > 15 cm, 2 patients. The following laparoscopy therapies were performed: 30 patients had cystectomy alone, 14 patients had partial pericystectomy. Pericystectomy was performed using a hook and harmonic tissue sealers with the resection made through normal liver tissue.Results: Three patients were converted to open surgery. Seven patients had biliary leakage through their cystic cavity drains. Five stopped spontaneously by the 7th postoperative day and 2 responded to ERCP sphincterotomy. There were no deaths and no recurrence of disease noted by 6 months.Conclusion: In selected patients with hepatic hydatid disease, a laparoscopic treatment is feasible and safe with low conversion rate and short term recurrences.Key words: Hydatid cyst of liver, laparoscopic treatment
- Published
- 2017
9. Synthesis of bis(thiosemicarbazone) derivatives: Definition, crystal structure, biological potential and computational analysis
- Author
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Ateş, D., primary, Gulcan, M., additional, Gümüş, S., additional, Şekerci, M., additional, Özdemir, S., additional, Şahin, E., additional, and Çolak, N., additional
- Published
- 2017
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10. İNSAN HAKLARI TEMELİNDE AZINLIK VERGİLEMESİ VE TÜRKİYE ÖRNEĞİNDE VARLIK VERGİSİ DEĞERLENDİRMESİ
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ŞEN, Y. and GÜMÜŞ, S.
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Azınlık,Ayrımcılık Yasağı,Eşitlik İlkesi,Varlık Vergisi,Türkiye - Abstract
With regards to the rights owned by the people due to their presence, distinguishing prohibition of discrimination and, İnsanın varlığı dolayısı ile sahip olduğu haklar açısından ayrımcılık yasağı ile eşitlik ilkesinin birbirinden ayrılması insan hak ve özgürlerinin daha doğru tahlil edilmesi ve bir ülke içerisinde çoğunluğa nazaran daha düşük popülasyona sahip olan etnik grupların haklarının sınırlarının çizilmesi açısından son derece büyük öneme sahiptir. Çalışmamız 1942 yılında Türkiye Büyük Millet Meclisi tarafından çıkarılan Varlık Vergisinin bu kapsamda bir değerlendirmesidir. Bu sebeple öncelikle çalışmada insan hakları ile vergileme konularının kesişimine değinilmiş, ardından azınlık kavramının uluslararası belgelerde ele alınış şekli irdelenmiş ve son olarak da Osmanlı İmparatorluğu ve Türkiye Cumhuriyeti dönemlerinde azınlıklara yönelik vergilemelere değinerek Varlık Vergisinin neden benzer vergi uygulamalarının yapıldığı ülkelerde tepki çekmeyip Türkiye’de sorun yarattığına dair bir sorunsal yaratılmıştır.
- Published
- 2015
11. Squamous cell skin carcinoma due to chronic sacrococcygeal diseases
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Gumus Serdar, Gul Mehmet Onur, Eray Ismail Cem, Tabakan Ibrahim, Rencuzogullari Ahmet, and Yalav Orcun
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hidradenitis suppurativa ,human papillomavirus ,pilonidal sinus disease ,skin cancer ,sacrococcygeal region ,Medicine - Abstract
Introduction/Objective. Sacrococcygeal region squamous cell cancers (SCC) due to chronic sacrococcygeal diseases of skin are rare malignancies. The anatomical relation with the anus represents a challenge for diagnosis and surgical treatment. The oncological treatment algorithm is still controversial. Here, we investigated the clinicopathologic features of skin cancer of the sacrococcygeal region in a total of 10 cases from a surgical oncology reference center. Methods. We retrospectively analyzed the patients who underwent surgery for sacrococcygeal region skin SCC between January 2010 and July 2020. Results. All patients were male, and the mean age was 52.9±10.5 years. In the etiology, five patients had hidradenitis suppurativa, 2 had Human papillomavirus associated condyloma (Buschke-Lowenstein tumor), and 3 had pilonidal sinus disease. The mean time between the development of the lesion and malignancy diagnosis was 21.7±5.8 years. In the preoperative evaluation, three patients had bone invasion. None of the patients had anal sphincter or rectal invasion. Also, no patient had lymph node metastasis or distant metastasis. Wide local excision (WLE) was performed in all patients; 3 of them with bone resection. Adjuvant chemoradiotherapy was applied to five patients. In a 28.5±13.7 months follow-up, local recurrence occurred in 5 patients and WLE has performed again in these patients. Of these 5 patients, 2 eventually became metastatic. Finally, 3 patients died due to disease and 6 patients are still free of diseases. Conclusion. Sacrococcygeal region SCCs may rarely develop after a long interval from hidradenitis suppurativa, pilonidal sinus disease, and condyloma acuminata. Anal sphincter-sparing WLE can be applied, but sphincter dysfunction may occur. The disease is associated with a high risk of relapse and poor survival.
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- 2022
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12. 4-Methoxy-N-[(E)-(5-nitrothiophen-2-yl)methylidene]aniline
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Akbal T., Ağar E., Gümüş S., Erdönmez A., and OMÜ
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lcsh:Chemistry ,lcsh:QD1-999 ,General Materials Science ,General Chemistry ,Condensed Matter Physics ,Organic Papers - Abstract
The title molecule, C12H10N2O3S, is nonplanar with an interplanar angle of 33.44 (7)° between the benzene and thiophene rings. In the crystal there exist only weak intermolecular C—H...O interactions, π–π interactions between the benzene rings [centroid–centroid distance = 3.7465 (14) Å] and X—Y...π interactions to the thiophene and benzene rings [N...centroid distances = 3.718 (3) and 3.355 (3) Å, respectively]. Intermolecular C—H...O interactions link the molecules into chains parallel to the a axis.
- Published
- 2012
13. The Correlation Between Elastic Properties and AFM Images of Nanocoatings on Polymers
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Gümüş, S., primary, Polat, Ş., additional, Lackner, J.M., additional, and Waldhauser, W., additional
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- 2015
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14. Diyarbakır (Bismil) ili pamuk alanlarında zararlı Pamuk çizgili yaprakkurdu [Spodoptera exigua (Hübn.)] (Lep.:Noctuidae)'nun doğal düşmanları üzerinde bir gözlem
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Göven, M.A. and Gümüş, S.
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natural enemies ,Cotton ,Pamuk ,Spodoptera exigua ,doğal düşmanlar - Abstract
Natural enemies of beet armyworm [Spodoptera exigua (Hübn.)(Lep.: Noctuidae)] were determined in Diyarbakır province in 1993. The population dynamics were also observed during the studies. Geocoris pallidipennis (C.), Nabis pseudoferus Rem., N.rugosus L., Chrysoperla carnea (Steph.), Coccinella septempunctata L. were found as a predatory insects; Temelucha decorata (Grav.) and Barylypa pallida (Grav.) were found as a parasitoids on S.exigua., Diyarbakır (Bismil) ilinde 1993 yılında yürütülen bu çalışma ile Pamuk çizgili yaprakkurdu [Spodoptera exigua (Hübn.) (Lep.:Noctuidae)]'nun doğal düşmanları belirlenmiş ve popülasyon yoğunlukları gözlenmiştir.S.exigua'nın predatörü olarak Geocoris pallidipennis (C.), Nabis pseudoferus Rem., N.rugosus L., Chrysoperla carnea (Steph.), Coccinella septempunctata L.; parazitoiti olarak Temelucha decorata (Grav.) ve Barylypa pallida (Grav.) türleri saptanmıştır. Larva parazitoitlerinin yaklaşık %8 oranında etkili oldukları gözlenmiştir.
- Published
- 2008
15. 2D MAXY-JRES NMR spectroscopy of CHnCHm (CA nCXm) groups: Product operator theory and simulation
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Şaka I., Gümüş S., Gençten A., and Ondokuz Mayıs Üniversitesi
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MAXY-JRES ,Product operator formalism ,Multi-spin systems ,NMR - Abstract
There exist a variety of multi-pulse NMR experiments for spectral editing of complex molecules in solution. Maximum quantum correlation NMR spectroscopy (MAXY NMR) is one of the techniques for distinguishing CHn groups by editing 1H NMR spectra. Spectral assignments of 2D homonuclear J-resolved NMR spectroscopy become too difficult, due to complex overlapping spectra. In order to overcome this problem a new technique called 2D MAXY-JRES NMR spectroscopy, which is the combination of MAXY NMR and homonuclear J-resolved NMR spectroscopy techniques, is used. In this study, product operator theory of 2D MAXY-JRES NMR spectroscopy is performed for ISnI? S?m(I = I? = S = S? = 1/2; n = 1, 2; m = 1,2,3) multi-spin systems. By using obtained theoretical results, simulated spectra of 2D MAXY-JRES NMR spectroscopy are presented for several CHnCH m (CAnCXm) groups. © TÜBİTAK.
- Published
- 2007
16. PENDANT 13C NMR spectroscopy applied to CHn groups
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Gençten A., Şaka I., Gümüş S., and Ondokuz Mayıs Üniversitesi
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13C NMR ,Product Operator Theory ,PENDANT - Abstract
Polarization enhancement nurtured during attached nucleus testing (PENDANT) NMR spectroscopy gives signals of quaternary carbon atoms in addition to signals indicative of CH, CH2 and CH3 groups. In this study, using product operator theory, analytical description of PENDANT NMR spectroscopy for CHn (ISn, I = 1/2, S = 1/2, n = 0, 1, 2, 3) spin systems are presented. Simulation and experimental results of PENDANT NMR spectroscopy are also presented. Theoretical results are found to be in exact agreement with the simulation results and in good agreement with the experimental ones. © Tübi?tak.
- Published
- 2006
17. Synthesis of bis(thiosemicarbazone) derivatives: Definition, crystal structure, biological potential and computational analysis.
- Author
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Ateş, D., Gulcan, M., Gümüş, S., Şekerci, M., Özdemir, S., Şahin, E., and Çolak, N.
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THIOSEMICARBAZONES ,CHEMICAL synthesis ,CRYSTAL structure ,COMPUTATIONAL chemistry ,BENZOIC acid - Abstract
(2-(2-(2-methoxyphenyl)hydrazono)cyclohexane-1,3-diylidene) bis(hydrazine carbothioamide) (L
1 ), 4-(2-(-2,- 6-bis(2-carbamothioylhydrazono) cyclohexylidene) hydrazinyl)benzoic acid (L2 ), and (2-(2-(4-bromophenyl) hydrazono) cyclohexane-1,3-diylidene) bis(hydrazinecarbothioamide) (L3 ) bis(thiosemicarbazone) derivative compounds were synthesized by the condensation reaction of thiosemicarbazide and various ketone compounds. The structures of synthesized compounds were characterized by using FT-IR, ¹H and13 C-NMR spectra, elemental analysis and mass spectra. Also, the structure of L1 has been determined by X-ray crystallographic analysis. Additionally, the antioxidant activities (free radical (DPPH) scavenging, iron chelating and reducing power) of compounds were evaluated. Especially, L3 displayed good DPPH activity (84.13%) at 100 mg/L. Moreover, pBR322 plasmid DNA cleavage activity was examined and all of the compounds were able to cleave the plasmid DNA. Finally, the ground state geometries of the thiosemicarbazone derivatives were optimized using Density Functional Theory applications at B3LYP/6-31G (d,p) level in order to obtain information about the 3D geometries and electronic structure. [ABSTRACT FROM AUTHOR]- Published
- 2018
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18. Laparoscopic management of hydatid cyst of the liver.
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Yağmur, Y., Akbulut, S., Gümüş, S., Babür, M., and Can, M. A.
- Published
- 2016
19. Microstructural Characterization of Carbides in a Cast High-Speed Steel Using Different Metallographic Techniques
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Gümüş, S., primary, Atapek, Ş. H., additional, Polat, Ş., additional, Erişir, E., additional, and Alkan, A., additional
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- 2012
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20. Theoretical modeling and experimental studies on (E)-2-chloro-N-((5-nitrothiophen-2-yl)methylene)aniline
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Ceylan, Ü., primary, Deveci, Ö., additional, Gümüş, S., additional, Adar, E., additional, and Büyükgüngör, O., additional
- Published
- 2012
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21. A Product Operator Theory of DEPTQ NMR Spectroscopy for ISn(I = 1/2; S = 1; n = 0, 1, 2, 3) Spin Systems
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Şaka, İ., primary, Gençten, A., additional, and Gümüş, S., additional
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- 2011
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22. On the Evaluation of Two-Center Overlap Integrals over Integer and Noninteger n -Slater-Type Orbitals
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Özdoǧan, T., primary, Orbay, M., additional, and Gümüş, S., additional
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- 2002
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23. SOME RESULTS ON t-BEST APPROXIMATION IN FUZZY n-NORMED SPACES.
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GÜMÜŞ, S., EFE, H., and YILDIZ, C.
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- *
APPROXIMATION theory , *FUZZY sets , *SET theory , *SOFT sets , *NORMED rings - Abstract
The aim of this paper is to give the set of all t-best approximations on fuzzy n-normed spaces and prove some theorems in the sense of Vaezpour and Karimi [13]. [ABSTRACT FROM AUTHOR]
- Published
- 2012
24. A Product Operator Theory of DEPTQ NMR Spectroscopy for ISn (I = 1=2; S = 1; n = 0, 1, 2, 3) Spin Systems.
- Author
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Saka, I., Gençten, A., and Gümüş, S.
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OPERATOR theory ,POLARIZATION (Electricity) ,MULTIPLICITY of nuclear particles ,QUANTUM theory ,CARBON compounds ,HAMILTONIAN operator - Abstract
Distortionless enhancement by polarization transfer including the detection of quaternary nuclei is a carbon-editing pulse NMR experiment. In this experiment multiplicity information for all carbons including quaternary carbons are obtained. In the present study, analytical descriptions of DEPTQ NMR experiment have been investigated for weakly coupled IS
n (I = 1=2; S = 1; n = 0, 1, 2, 3) spin systems by using the product operator theory. Then, the theoretical discussion and the experimental suggestions for sub-spectral editing of C, CD, CD2 and CD3 groups have been presented. The comparison of the obtained results with those of the basic distortionless enhancement by polarization transfer NMR experiment has been also performed for CDn groups. It is shown that DEPTQ experiment can be also used for CDn groups. [ABSTRACT FROM AUTHOR]- Published
- 2011
25. The effect of layer architecture on the tribological behaviour of coatings
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Gümüs Serap, Polat Şeyda, Lackner Juergen M., and Waldhauser Wolfgang
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Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
PEEK is a medical grade material which is increasingly used instead of titanium in osteosynthesis and joint replacement. However, its surface properties of PEEKlack on an adequate osteoconductivity. In this study, two coatings with different architectures composed of Ti, Mg and Ag were prepared by physical vacuum deposition to be used in spinal implants. The mechanical durability of the coatings is investigated in terms of their tribological behaviour.
- Published
- 2018
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26. Failure behavior of PA12 based SLS lattice structure with macro-porosity
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Gümüs Serap, Lackner Juergen M., Polat Şeyda, Kraschitzer Wolfgang, Hanning Hermann, Bayram Alperen, Kaya Mesut, Çallı Metin, and Alkan Attila
- Subjects
Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Nowadays the demands of high reliability, high mechanical properties under fatigue loading and ultra-light-weight design are topics of pressing needs in different industry applications. Additive manufacturing technique has great potential to meet such demands and Selective Laser Sintering (SLS) is the dominantly used one due to its versatility in material design, construction and the much higher achievable mechanical strength compared to its competing technologies like fused filament fabrication. In this study, it is aimed to give an insight to the fracture behaviour of SLS produced lattice structure with macro-porosity under compression load. The stress type and distribution on the lattice structure under compression load are anisotropic because of the unit cell topologies and the anisotropic processing condition. Therefore, different kinds of fracture types are evident depending on the region of the fractured struts.
- Published
- 2018
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27. HRCT findings of pulmonary sarcoidosis; relation to pulmonary function tests
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Ors Fatih, Gumus Seyfettin, Aydogan Mehmet, Sari Sebahattin, Verim Samet, and Deniz Omer
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Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Chest-X-ray has several limitations in detecting the extent of pulmonary disease in sarcoidosis. It might not reflect the degree of pulmonary involvement in patients with sarcoidosis when compared to computed tomography of the thorax. We aimed to investigate the HRCT findings of pulmonary sarcoidosis and to find out the existence of possible relations between HRCT findings and PFTs. In addition, we aimed to investigate the accordance between HRCT findings and conventional chest-X-ray staging of pulmonary sarcoidosis. Method 45 patients with sarcoidosis with a mean age 29.7+/− 8.4 years were evaluated. Six of them were female and 39 were male. The type, distribution and extent of the parameters on HRCT/CTs were evaluated and scored. Chest-X-rays were evaluated for the stage of pulmonary sarcoidosis. Correlations were investigated between HRCT/CT parameter scores, Chest X-Ray stages and pulmonary function parameters. Results Nodule, micronodule, ground glass opacity and consolidation were the most common HRCT findings. There were significant correlations between pulmonary function parameters, HRCT pattern scores, and chest-X-ray stages. A significant correlation between chest-x-ray score and total HRCT score was found. Conclusions Pulmonary sarcoidosis patients might have various pulmonary parenchymal changes on HRCT. Thorax HRCT was superior to chest-X-ray in detecting pulmonary parenchymal abnormalities. The degree of pulmonary involvement might be closely related to the loss of pulmonary function measured by PFTs. Chest-X-ray is considered to have a role in the evaluation of pulmonary sarcoidosis.
- Published
- 2013
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28. Novel triazole bridged quinoline-anthracene derivatives: synthesis, characterization, molecular docking, evaluation of electronic and enzyme inhibitory properties.
- Author
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Gümüş A, Sadeghian N, Sadeghi M, Taslimi P, and Gümüş S
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- Structure-Activity Relationship, Enzyme Inhibitors chemistry, Enzyme Inhibitors pharmacology, Enzyme Inhibitors chemical synthesis, Humans, Protein Binding, Molecular Docking Simulation, Quinolines chemistry, Quinolines pharmacology, Quinolines chemical synthesis, Anthracenes chemistry, Anthracenes pharmacology, Anthracenes chemical synthesis, Triazoles chemistry, Triazoles pharmacology, Triazoles chemical synthesis
- Abstract
Two novel quinoline-anthracene conjugates comprising styrylquinoline and anthracene moieties linked by triazole bridges were designed and synthesized in good yields. These molecules were determined for some metabolic enzymes activities. Results indicated that the synthetic molecules exhibited powerful inhibitory actions against all aims as compared to the control molecules. K
i values of novel compound QA-1 for hCA I, hCA II, AChE, and α -glycosidase enzymes were obtained of 20.18 ± 2.46 µM, 14.63 ± 1.14 µM, 71.48 ± 7.76 nM, 401.35 ± 36.84 nM, respectively. Both compounds showed promising candidate complexes for drug development with considerable in vitro different enzymes inhibitory activities. The binding conformations patterns and interaction of QA-1 and QA-2 compounds with α-glucosidase, acetycholinesterase, carbonic anhydrase-I and carbonic anhydrase-II enzymes were investigated through molecular docking profiles. The docking outputs are consistent with the Ki and IC50 values of novel compounds. Three dimensional geometries and electronic properties of the title compounds were obtained by the applicational computational approach at B3LYP/6-31++G(d,p) level of theory.Communicated by Ramaswamy H. Sarma.- Published
- 2025
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29. Phenolic Contents, Antioxidant Activities, LCMS Profiles of Mespilus germanica Leaf Extract and Effects on mRNA Transcription Levels of Apoptotic, Autophagic, and Necrotic Genes in MCF7 and A549 Cancer Cell Lines.
- Author
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Görmez G, Yüksek V, Usta A, Dede S, and Gümüş S
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- Humans, MCF-7 Cells, Autophagy drug effects, A549 Cells, Mass Spectrometry, Transcription, Genetic drug effects, Necrosis, Plant Leaves chemistry, Plant Extracts pharmacology, Plant Extracts chemistry, Antioxidants pharmacology, Apoptosis drug effects, Phenols pharmacology, RNA, Messenger genetics, RNA, Messenger metabolism
- Abstract
Cancer, defined by the continuous, uncontrollable proliferation of cells in the human body, is a disease with a rapidly increasing incidence and mortality rate. Scientists are looking for novel ways to cure and prevent this sneaky disease because of the toxicity of contemporary chemotherapy and the cancer cells' resilience to anticancer drugs. Determining the effect of herbal medicines, which do not have as harmful side effects as synthetic drugs, on cancer cell lines is an essential preliminary study in the production of effective drugs against cancer. In this study, the phenolic acid profile, antioxidant capacity, and cytotoxicity of the medicinal plant Mespilus germanica (MG) leaf extract were determined, and its effects on the expression of some apoptotic, necrotic, and autophagic pathway genes of MCF7 (Human breast cancer line) and A549 (Human lung cancer line) and healthy HDF (Human Dermal Fibroblasts) cells were investigated for the first time. The LCMS device detected many important phenolic compounds previously reported to act against cancer cells in Mespilus germanica leaf extract. DPPH and total phenolic content showed high antioxidant capacity. The cytotoxicity of MG was determined by the MTT method. The levels of mRNA transcription for Atg5, Atg3, Rıpk1, Bcl2, Bax, Apaf1, Caspase-8, Caspase-7, Caspase-3, and Caspase-9, as well as the expression patterns of the DNA damage markers P53 and Parp-1 genes, were assessed. MG leaf extract did not cause significant toxicity against healthy HDF cells. However, it had a cytotoxic effect on A549 and MCF7 cancer cell lines, increasing the transcription levels of essential genes involved in cell death mechanisms. This research is the first to analyze the phenolic components and antioxidant capabilities of leaf extracts from Mespilus germanica. Additionally, it investigates the impact of these extracts on crucial genes involved in cell death pathways of A549 lung cancer, MCF7 breast cancer, and non-cancerous HDF (Human Dermal Fibroblasts) cells., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2024
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30. How to Decide Oxygen Therapy in Childhood Carbon Monoxide Poisoning?
- Author
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Uysalol M, Gümüş S, and Yıldız R
- Abstract
Objective: Carbon monoxide poisoning is an important cause of morbidity and mortality all over the world. In our study, it was aimed to determine the clinical and laboratory parameters that may be effective in deciding the need for hyperbaric oxygen therapy in the management of cases., Materials and Methods: From January 2012 to the end of December 2019, 83 patients who applied to a university hospital pediatric emergency department in İstanbul with the diagnosis of carbon monoxide poisoning were included. Demographic characteristics, carbon monoxide source, exposure duration, treatment approach, physical examination findings, Glasgow Coma Score, laboratory results, electrocardiogram, cranial imaging, and chest x-ray were evaluated from the records., Results: The median age of the patients was 56 (37.0-100.0) months and 48 (57.8%) of them were male. The median time of exposure to carbon monoxide was 5.0 (0.5-3.0) hours in those who received hyperbaric oxygen therapy and was significantly higher than those who received normobaric oxygen therapy (P < .001). Myocardial ischemia, chest pain, pulmonary edema, and renal failure were not detected in any of the cases. The median lactate level was detected as 1.5 (1.0-2.15) mmol/L in those who received normobaric oxygen therapy and 3.7 (3.17-4.62) mmol/L in those who received hyperbaric oxygen therapy, and the difference between them was statistically significant (P < .001)., Conclusions: A guideline containing precise clinical and laboratory parameters for hyperbaric oxygen therapy in children has not been developed yet. In our study, carbon monoxide exposure duration, carboxyhemoglobin levels, neurological symptoms, and lactate levels were found to be guiding parameters in determining the need for hyperbaric oxygen therapy.
- Published
- 2023
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31. COVID-19 Disease in Presenting to the Pediatric Emergency Department: A Multicenter Study of 8886 Cases.
- Author
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Duman M, Şık N, Tekşam Ö, Akça H, Kurt F, Çağlar AA, Yıldız LA, Taşar MA, Fidancı İ, Yayla BCC, Yılmaz D, Güngör E, Demir Ş, Çokuğraş H, Cebeci SO, Önal P, Saz EU, Yurtseven A, Uysalol M, Yıldız R, Gümüş S, Bal A, Bayturan SŞ, Zengin N, Atik S, Çiftdoğan DY, Berksoy E, Çiçek A, Şahin S, Kızıl MC, Kara Y, Apa H, Ulusoy E, Kara AA, Yesil E, Erdem M, Turan C, Arslanoglu S, Duyu M, Besli GE, Arslan G, Oflu AT, Çeleğen M, Buldu E, Pişkin İE, Kardeş H, Yılmaz HL, Yıldızdaş D, Gökulu G, Çay P, Özer U, Güleryüz OD, Çolak Ö, and Güneysu ST
- Subjects
- Child, Emergency Service, Hospital, Female, Fever etiology, Humans, Male, Retrospective Studies, SARS-CoV-2, Systemic Inflammatory Response Syndrome, COVID-19 complications, COVID-19 diagnosis, COVID-19 epidemiology
- Abstract
Background: The aim was to evaluate the epidemiological, clinical, laboratory, and radiologic data of children with SARS-CoV-2 positivity by polymerase chain reaction (PCR) together with treatment strategies and clinical outcomes and to evaluate cases of multisystem inflammatory syndrome in children (MIS-C) in this population., Methods: This was a multicenter retrospective observational cohort study performed in the pediatric emergency departments of 19 tertiary hospitals. From March 11, 2020, to May 31, 2021, children who were diagnosed with confirmed nasopharyngeal/tracheal specimen SARS-CoV-2 PCR positivity or positivity for serum-specific antibodies against SARS-CoV-2 were included. Demographics, presence of chronic illness, symptoms, history of contact with SARS-CoV-2 PCR-positive individuals, laboratory and radiologic investigations, clinical severity, hospital admissions, and prognosis were recorded., Results: A total of 8886 cases were included. While 8799 (99.0%) cases resulted in a diagnosis of SARS-CoV-2 with PCR positivity, 87 (1.0%) patients were diagnosed with MIS-C. Among SARS-CoV-2 PCR-positive patients, 51.0% were male and 8.5% had chronic illnesses. The median age was 11.6 years (IQR: 5.0-15.4) and 737 (8.4%) patients were aged <1 year. Of the patients, 15.5% were asymptomatic. The most common symptoms were fever (48.5%) and cough (30.7%) for all age groups. There was a decrease in the rate of fever as age increased (p < 0.001); the most common age group for this symptom was <1 year with the rate of 69.6%. There was known contact with a SARS-CoV-2 PCR-positive individual in 67.3% of the cases, with household contacts in 71.3% of those cases. In terms of clinical severity, 83 (0.9%) patients were in the severe-critical group. There was hospital admission in 1269 (14.4%) cases, with 106 (1.2%) of those patients being admitted to the pediatric intensive care unit (PICU). Among patients with MIS-C, 60.9% were male and the median age was 6.4 years (IQR: 3.9-10.4). Twelve (13.7%) patients presented with shock. There was hospital admission in 89.7% of these cases, with 29.9% of the patients with MIS-C being admitted to the PICU., Conclusion: Most SARS-CoV-2 PCR-positive patients presented with a mild clinical course. Although rare, MIS-C emerges as a serious consequence with frequent PICU admission. Further understanding of the characteristics of COVID-19 disease could provide insights and guide the development of therapeutic strategies for target groups., Competing Interests: Declaration of Competing Interest The authors declare no conflict of interest., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
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32. Evaluation of antibody response after COVID-19 vaccination of healthcare workers.
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Uysal EB, Gümüş S, Bektöre B, Bozkurt H, and Gözalan A
- Subjects
- Antibodies, Viral, Antibody Formation, COVID-19 Vaccines, Female, Health Personnel, Humans, Male, SARS-CoV-2, Spike Glycoprotein, Coronavirus, Vaccination, COVID-19 prevention & control, Vaccines
- Abstract
The common goal of all vaccines developed against COVID-19, although they have been designed with different methods, is to develop an effective immunity and antibody response against SARS-CoV-2. However, the postvaccination immune response and antibody levels differ between individuals. This study examined the relationship between postvaccine seropositivity rates, age, gender, smoking, and body mass index (BMI), and antibody titers. A total of 314 healthcare workers (HCW) who were not previously infected with COVID-19 and who had received two doses of CoronaVac inactivated vaccine participated in the study. Seropositivity against the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein was measured from the participants 4 weeks after the second dose of vaccine using the electrochemiluminescence (ECLIA) method. In addition, the antibody developed against the nucleocapsid protein (NCP) was evaluated and compared using Elecsys Anti-SARS-CoV-2 kit. One hundred and eighty-one of the participants were female (57.6%) with a median age of 39 (interquartile range [IQR], 10) and 133 (42.4%) were male with a median age of 41 (IQR, 11). 99.6% of the volunteers developed seropositivity 4 weeks after the second dose of vaccine. It was also observed that the rate of RBD protein antibody titer was >250 U/ml in smokers, which is quite low compared to nonsmokers (p = 0.032), and that high RBD antibody titers were proportionally lower in obese participants, according to BMI values, compared to those with normal BMI (49.5% and 9.9%). It was observed that seropositivity developed in almost all participants after the CoronaVac vaccine. However, it was determined that the antibody titer measured varied depending on factors such as smoking, BMI, and duration., (© 2021 Wiley Periodicals LLC.)
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- 2022
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33. Nailfold capillaroscopy: A sensitive method for evaluating microvascular involvement in children with SARS-CoV-2 infection.
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Çakmak F, Demirbuga A, Demirkol D, Gümüş S, Torun SH, Kayaalp GK, Ömeroglu RE, Somer A, Uysalol M, Yıldız R, and Ayaz NA
- Subjects
- Adolescent, Age Factors, Biomarkers blood, C-Reactive Protein analysis, COVID-19 physiopathology, COVID-19 virology, Capillaries physiopathology, Case-Control Studies, Child, Child, Preschool, Female, Fibrin Fibrinogen Degradation Products analysis, Humans, Male, Microcirculation, Predictive Value of Tests, Regional Blood Flow, Systemic Inflammatory Response Syndrome physiopathology, Systemic Inflammatory Response Syndrome virology, COVID-19 pathology, Capillaries pathology, Microscopic Angioscopy, Nails blood supply, Systemic Inflammatory Response Syndrome pathology
- Abstract
Objectives: The hyperinflammatory state and the viral invasion may result in endothelial dysfunction in SARS-CoV-2 infection. Although a method foreseeing microvascular dysfunction has not been defined yet, studies conducted in patients diagnosed with COVID-19 have demonstrated the presence of endotheliitis. With this study, we aimed to investigate the microvascular circulation in patients diagnosed with COVID-19 and multisystem inflammatory syndrome in children (MIS-C) by nailfold videocapillaroscopy (NVC)., Methods: Thirty-one patients with SARS-CoV-2 infection, 25 of whom were diagnosed with COVID-19 and 6 with MIS-C and 58 healthy peers were included in the study. NVC was performed in eight fingers with 2 images per finger and 16 images were examined for the morphology of capillaries, presence of pericapillary edema, microhemorrhage, avascular area, and neoangiogenesis. Capillary length, capillary width, apical loop, arterial and venous width, and intercapillary distance were measured from three consecutive capillaries from the ring finger of the non-dominant hand., Results: COVID-19 patients showed significantly more capillary ramification (p < 0.001), capillary meandering (p = 0.04), microhemorrhage (p < 0.001), neoangiogenesis (p < 0.001), capillary tortuosity (p = 0.003). Capillary density (p = 0.002) and capillary length (p = 0.002) were significantly lower in the patient group while intercapillary distance (p = 0.01) was significantly longer compared with healthy volunteers. Morphologically, patients with MIS-C had a higher frequency of capillary ramification and neoangiogenesis compared with COVID-19 patients (p = 0.04)., Conclusion: Abnormal capillary alterations seen in COVID-19 and MIS-C patients indicate both similar and different aspects of these two spectra of SARS-CoV-2 infection and NVC appears to be a simple and non-invasive method for evaluation of microvascular involvement., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
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34. Parasitic Appendicitis in 14.797 Cases: A Retrospective Cohort Study
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Gümüş S and Söğütçü N
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- Adolescent, Adult, Animals, Appendectomy statistics & numerical data, Appendicitis surgery, Appendix parasitology, Appendix surgery, Child, Enterobiasis surgery, Enterobius isolation & purification, Female, Humans, Intestinal Diseases, Parasitic parasitology, Intestinal Diseases, Parasitic surgery, Male, Retrospective Studies, Appendicitis parasitology, Enterobiasis parasitology
- Abstract
Objective: This study aimed to determine the frequency of Enterobius vermicularis in appendectomy specimens and evaluate the histopathological characteristics of adult and pediatric cases with E. vermicularis infection., Methods: Appendectomies examined from 1 January 2010, to 1 December 2020, were analysed retrospectively. Cases were divided into two groups: under 18 years (children) and 18 and over (adults). Demographic and histopathological characteristics of patients were also examined., Results: Out of 14.797 patients that underwent appendectomy, 6.130 were children and 8.667 were adults. E. vermiculari s was detected in 268 patients, wherein 64.2% were children and 35.8% were adults. In the detection of E. vermicularis in appendectomy specimens, the frequency was higher in children compared to that in adults (2.85%, 1.1%, respectively) (p<0.001). Histopathologically, acute appendicitis was defined in 31.7% (n=85) of 268 cases, and E. vermicularis was found to cause a higher rate of acute appendicitis in adults (p<0.001)., Conclusion: The frequency of E. vermicularis in appendectomy specimens is higher in children. However, E. vermicularis causes acute appendicitis more frequently in adults.
- Published
- 2021
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35. Assessment of demographic, clinical and histopathological features of patients who underwent appendectomy due to a presumed diagnosis of acute appendicitis.
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Akbulut S, Bahçe ZS, Öztaş T, Gümüş S, Söğütçü N, Sakarya H, Gök AFK, and Yağmur Y
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- Adolescent, Adult, Aged, Aged, 80 and over, Female, Humans, Male, Middle Aged, Retrospective Studies, Young Adult, Appendectomy statistics & numerical data, Appendicitis diagnosis, Appendicitis epidemiology, Appendicitis surgery
- Abstract
Background: To compare the clinical, biochemical, and histopathological features of patients who underwent appendectomy due to a presumed diagnosis of acute appendicitis (AAp)., Methods: The demographic, biochemical and histopathological data of 8206 patients who underwent appendectomy for AAp between January 2006 and March 2014 were retrospectively analyzed in this study. Patients were compared regarding the following characteristics: disruption by season (autumn vs. winter vs. spring vs. summer), working days (weekdays vs. weekends), histopathological findings (AAp vs. normal appendix [NAp]) and histopathological subgroup (non-perforated AAp vs. perforated AAp vs. NAp)., Results: Of the 8206 patients aged between 16 and 89 years, 4763 (58.0%) were male. Appendectomy distribution by season was as follows: autumn (n=1959; 23.9%), winter (n=2062; 25.1%), spring (n=2061; 25.1%) and summer (n=2124, 25.9%). NAp rates were higher in summer than those in other seasons. White blood cell (WBC) and neutrophil levels were significantly higher in autumn and winter compared with those in other seasons. In total, 6120 (74.6%) appendectomies occurred on weekdays and 2086 (25.4%) on weekends. WBC and neutrophil levels were significantly higher on weekends than those on weekdays. Appendectomy distribution by histopathological groups as follows: AAp (n=7414; 90.3%) and NAp (n=792; 9.7%). Appendectomy distribution by histopathological subgroups was as follows: non-perforated AAp (n=6966; 84.9%), perforated AAp (n=448; 5.5%), and NAp (n=792; 9.7%). WBC, neutrophil, and TBil levels in the non-perforated and perforated AAp groups were significantly higher than in the NAp group. While most of the patients with perforated AAp (62.1%) and non-perforated AAp (59.6%) were males, most of the patients with NAp (58.1%) were females., Conclusion: This study suggests that a relationship exists between demographic features, histopathological findings of appendectomy specimens, seasons, days of the week, and working days in patients undergoing appendectomy.
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- 2021
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36. Effect of corticosteroid (triamcinolone acetonide) and chlorhexidin on chemotherapy- induced oxidative stress in buccal mucosa of rats.
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Gümüş S, Yarıktaş M, Nazıroğlu M, Cihangir Uğuz A, Aynali G, and Başpınar Ş
- Abstract
Oral mucositis (OM) refers to erythematous and ulcerative lesions of the oral mucosa. This pathology can occur by various causes. Cancer therapy is one of the well-known causes of OM such as chemotherapy and/or with radiation therapy. It has been widely mentioned that oxidative stress parameters such as lipid peroxidation (LP) levels increase during cancer process. Glutathione (GSH) is one of the major intracellular enzymes to detoxify oxidant molecules. The aim of this study was to investigate and compare the effects of Triamcinolone Acetonide (TA), a synthetic steroid chlorhexidine (CHX), a chemical antiseptic, on 5- fluorouracil (5-FU), a chemotherapeutic agent and soft abrasion induced OM in buccal mucosa of rats.OM was induced in rats through a combination of 5-FU treatment and mild abrasion of the cheek pouch with a wire brush. Buccal mucosa lipid peroxidation (LP) levels were higher (p< 0.05) in 5-FU group than in control although LP levels were lower (p<0.05) in TA group than in control group. The reduced glutathione levels were lower (p<0.05) in 5-FU group than in the control group although its level was higher (p<0.05) in TA and CHX groups than in the 5-FU group. Glutathione peroxidase activity was also higher (p<0.05) in TA group than the 5- FU group. In histopathological analyses, treatment with TA reduced 5-FU induced inflammatory cell infiltration and ulceration (p<0.001) but not with CHX.In conclusion, we observed that TA and CHX treatment modulated chemotherapy induced oxidative injury in the rat OM. However, only TA histopathologically ameliorated the 5-FU induced OM of rats. These findings suggest that TA is a useful agent for management of experimental oxidative injury and OM caused by the chemotherapy.
- Published
- 2020
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37. Synthesis, biological evaluation of antioxidant-antibacterial activities and computational studies of novel anthracene- and pyrene-based Schiff base derivatives.
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GÜmÜŞ A, OkumuŞ V, and GÜmÜŞ S
- Abstract
Schiff base derivatives with anthracene- and pyrene-based units, A1-A6 and P1-P6 were synthesized (89%-99% yields). Schiff base derivatives were designed to possess an heterocyclic moiety on one side to enhance the coordination ability towards metals. To investigate the biological assay of the newly synthesized compounds, their DPPH (2,2-diphenyl-1-picrylhydrazyl) radical scavenging, metal chelating, reducing power, antibacterial and DNA binding activities were tested. A6 (63.1%) showed the maximum free radical scavenging activity among all. However, compound P3 at concentration of 200 μg/mL possessed the highest metal chelating (45.8%) activity and power of reduction. In addition, P3 and A6 showed antibacterial activity against all bacteria tested and both compounds were very well bound to CT-DNA. Density functional theory method with B3LYP/6-311++G(d,p) basis set was performed to get information about the structural and electronic properties of the present compounds. In addition, the metal coordination properties of the dimers of the parent Schiff bases were investigated through interactions with Zn
2+ ., Competing Interests: CONFLICT OF INTEREST: none declared, (Copyright © 2020 The Author(s).)- Published
- 2020
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38. The Underminers: Booming Illicit Trade of Roll Your Own and Waterpipe Tobacco in Turkey.
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Uznay F and Gümüş S
- Abstract
Objectives: The aim of this study is to specify the reasons and extents of illicit Roll-Your-Own (RYO) and waterpipe tobacco (WPT) markets which broke out in Turkey and to determine the destruction of these markets over the effectiveness of main tobacco control measures, the effect of this destruction on increase in tobacco use and the measures that can be taken., Materials and Methods: Reliable data about illicit trade are quite limited. This study was prepared through using the recommended methods on illicit trade in "Methods for Evaluating Tobacco Control Policies" published by the International Agency For Research On Cancer (IARC) and "Understand, Measure, and Combat Tobacco Smuggling" published by the World Bank., Results: RYO and WPT markets are almost totally illicit in Turkey. These markets serve to tobacco outbreak by increasing total tobacco use far beyond the official data through its size surpassing 30% of total consumption and they have begun to invalidate all of the principle tobacco control measures by hindering and undermining them., Conclusion: In order to implement tobacco control measures effectively in Turkey, these illicit markets must be included in system by doing necessary regulations promptly. It is strongly needed that illicit RYO and WPT production and trade should be described as newly emerged threat areas in tobacco control literature, since other countries may suffer from similar problems.
- Published
- 2020
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39. Recent classifications systems for gastroenteropancreatic neuroendocrine tumors A single-center experience.
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Yagmur Y, Söğutcü N, and Gümüş S
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- Humans, Intestinal Neoplasms pathology, Ki-67 Antigen, Neoplasm Grading, Neoplasm Staging, Neuroendocrine Tumors pathology, Pancreatic Neoplasms pathology, Prognosis, Stomach Neoplasms pathology, Intestinal Neoplasms classification, Neuroendocrine Tumors classification, Pancreatic Neoplasms classification, Stomach Neoplasms classification
- Abstract
Aim: In this study, we aimed to review the demographic histopathological and clinical findings and long-term results of our GEP-NET cases, as well as to re-evaluate our cases according to the new classification systems., Material and Method: 46 patients diagnosed as GEPNETs were presented. Immunohistochemical studies were performed in all cases. The cases were divided into 3 groups according to their embryogenic origin (Foregut, Midgut and Hindgut). All cases re-evaluated according to recent WHO (2019) and AJCC (2017) TNM calcification. Investigation was made to find differences between the embryonic origins and to find correlation between stage and grading systems with each other., Results: The most common localization was appendix (52.3%) The distribution of cases according to embryologic origin were as follows: foregut tumors 13 cases (27.7%), midgut tumors 27 cases (57.4%) and hindgut tumors in 6 cases (12.8%). The Ki-67 ratio was evaluated in all patients, with a mean of 6.34%±2.51 (range: 1-80). The Ki-67 ratio was less than 3% in 82.6% of patients. Mitotic count was less than 2 per/10 HPF in 76% of patients. According to WHO 2019 most of patients were Grade 1 Neuroendocrine Tumor (65.2%) and there were only 2 Neuroendocrine Carcinoma (NEC) cases. According to AJCC 2017 most cases were Stage 1 (52.1%) and only 4 cases were Stage 4. The grades and stages of our cases were statistically significantly correlated. Overall survival did not differ significantly with regard to embryologic origin (log-rank test, p=0.062). The median overall survival was 106±7.4 months. The 5-year cumulative survival rate was 84.1±5.6 years. Seven patients died during this time with a median time of 5 months (range: 1-31 months). In the Cox regression analysis, the percentage of Ki- 67 was found to have a statistically significant effect on overall survival (p=0.000) CONCLUSION: Correlation was noticed between WHO 2019 and AJCC 2017 classification for grade and stage and controlled trials must be undertaken to develop a single diagnostic algorithm and to change the future management of such patients., Key Words: Neuroendocrine Tumors, Gastroenteropancreatic neuroendocrine tumor.
- Published
- 2020
40. [Evaluation of Microscopic Examination, Culture and Polymerase Chain Reaction Tests in the Diagnosis of Trichomonas vaginalis Infection].
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Yazısız H, Koyuncu Özyurt Ö, Öztürk Eryiğit F, Özhak B, Öngüt G, Özekinci M, Dönmez L, Çolak D, Gümüş S, and Öğünç D
- Subjects
- Cell Culture Techniques, Chlamydia trachomatis genetics, Female, Humans, Microscopy standards, Multiplex Polymerase Chain Reaction, Neisseria gonorrhoeae genetics, Pregnancy, Trichomonas vaginalis genetics, Chlamydia Infections diagnosis, Diagnostic Techniques and Procedures standards, Gonorrhea diagnosis, Trichomonas Infections diagnosis, Trichomonas Infections parasitology, Trichomonas Vaginitis diagnosis
- Abstract
Sexually transmitted infections (STIs) are important as a public health problem all over the world. There are some difficulties in prevention and control programs of STIs due to clinical and laboratory diagnostic problems.The most common STIs are Chlamydia trachomatis infections, trichomoniasis and gonorrhea. The study aimed to investigate the direct microscopic examination, culture and polymerase chain reaction (PCR) tests in the diagnosis of Trichomonas vaginalis infection; to determine other microbiological agents that may cause vaginal discharge and to evaluate the various social variables in women with vaginal discharge admitted to the outpatient clinic of Obstetrics and Gynecology in Akdeniz University Hospital. Two hundred and fifteen patients were enrolled in the study. The socio-demographic features of the patients were recorded. Vaginal/endocervical swab specimens taken from patients were evaluated by microscopic examination. Swab specimens were inoculated into blood agar, MacConkey agar and chocolate agar for bacterial culture. Modified Trichosel broth with 5% horse blood (Becton Dickinson, USA) was used for Trichomonas spp. culture. The presence of C.trachomatis, Neisseria gonorrhoeae, and T.vaginalis in swab samples were investigated by multiplex PCR assay (BD Max CT/GC/TV, Becton Dickinson, USA). At least one pathogen was detected among 65 (30.3%) samples. T.vaginalis was detected by microscopic examination and PCR in four of 215 (1.9%) patients. Existence of yeast morphology was observed in 21 (9.8%) specimens by microscopic examination. Twenty four (11.2%) patients were diagnosed as bacterial vaginosis microscopically according to Nugent score system. Candida species grew in 32 (14.9%) and Streptococcus agalactiae grew in 2 (0.9%) of the specimens. C.trachomatis was detected in 2 (0.9%) samples and N.gonorrhoeae in 1 (0.5%) sample by PCR. In this study, 95.3% of the patients were married and 96.7% had only one sexual partner in the mean time. The rate of detection of pathogens were statistically higher in women who have had two or more pregnancies (p<0.05). In our study, T.vaginalis together with N.gonorrhoeae and C.trachomatis were investigated by PCR method in women with vaginal discharge. The use of multiplex PCR test allowed simultaneous investigation of multiple pathogens in the patient samples.
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- 2020
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41. Solitary Cecal Diverticulitis Mimicking Acute Appendicitis in a Child: Intraoperative Diagnosis.
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Çil ATB and Gümüş S
- Abstract
Right colonic and cecal diverticulitis can mimic acute appendicitis. A 14-year-old, 105-kg boy presented at the emergency department with symptoms mimicking acute appendicitis. Surgery revealed a case of perforated solitary cecal diverticulitis. Diverticulosis is a disease known to be common in adulthood, but the incidence is increasing in childhood. Therefore, emergency room residents and pediatric surgeons need to keep this diagnosis in mind in the differential diagnosis of acute appendicitis. Early clarification of the etiology will enable the planning of the best treatment strategy., Competing Interests: Conflict of interest: None declared., (Copyright: © 2019 by The Medical Bulletin of Sisli Etfal Hospital.)
- Published
- 2019
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42. The impact of sedation type on diagnostic yield of EBUS-TBNA: Looking from another point of view.
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Gümüş S, Kaya H, Turhan U, Özkısa T, and Tozkoparan E
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- Bronchoscopy, Endoscopic Ultrasound-Guided Fine Needle Aspiration, Humans, Lymph Nodes, Biopsy, Fine-Needle, Image-Guided Biopsy
- Published
- 2018
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43. Effect of a corticosteroid (triamcinolone) and chlorhexidine on chemotherapy-induced oxidative stress in the buccal mucosa of rats.
- Author
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Gümüş S, Yarıktaş M, Nazıroğlu M, Uğuz AC, Aynali G, and Başpınar Ş
- Subjects
- Animals, Antineoplastic Agents adverse effects, Female, Fluorouracil adverse effects, Oxidative Stress drug effects, Rats, Rats, Wistar, Stomatitis chemically induced, Anti-Inflammatory Agents pharmacology, Chlorhexidine pharmacology, Mouth Mucosa drug effects, Mouthwashes pharmacology, Stomatitis drug therapy, Triamcinolone pharmacology
- Abstract
Oral mucositis manifests as erythematous and ulcerative lesions of the oral mucosa. Among its various causes, cancer treatment (e.g., chemotherapy with or without radiation therapy) is one of the more well known. It has been widely mentioned that oxidative stress parameters such as lipid peroxidation levels increase during the cancer process. Glutathione is one of the major intracellular enzymes used to detoxify oxidant molecules; it exists in both a reduced and oxidized state. Reduced glutathione is used as a substrate to synthesize glutathione peroxidase. We conducted a study to investigate and compare the effects of triamcinolone (a synthetic steroid) and chlorhexidine (a chemical antiseptic) on 5-fluorouracil (5-FU; a chemotherapeutic agent)-induced oral mucositis in the buccal mucosa of 36 rats. Oral mucositis was induced through a combination of 5-FU treatment and mild abrasion of the cheek pouch with a wire brush. The rats were treated with one of four regimens: saline placebo (group I), 5-FU only (group II), 5-FU plus triamcinolone (group III), and 5-FU plus chlorhexidine (group IV). Three rats in the triamcinolone group died of unknown causes on days 7 and 8, and 3 rats in the chlorhexidine group died on days 7 and 9. On day 9, the remaining 30 rats were sacrificed and examined. Buccal mucosa lipid peroxidation levels were significantly higher in the 5-FU-only group than in the control group and significantly higher in the control group than in the triamcinolone group (p < 0.05 for both). Levels of reduced glutathione were significantly lower in the 5-FU-only group than in both the triamcinolone group and the chlorhexidine group (p < 0.05). Glutathione peroxidase activity was significantly higher in the triamcinolone group than in the 5-FU-only group (p < 0.01). Histopathologic analysis revealed that treatment with triamcinolone significantly reduced 5-FU-induced inflammatory cell infiltration and ulceration (p < 0.001); no such reduction was seen with chlorhexidine. In conclusion, we observed that triamcinolone and chlorhexidine treatment modulated chemotherapy-induced oxidative injury in rat oral mucositis. However, only triamcinolone histopathologically ameliorated 5-FU-induced oral mucositis. These findings suggest that triamcinolone is a useful agent for the management of experimental oxidative injury and oral mucositis caused by 5-FU chemotherapy.
- Published
- 2016
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44. Crystal structure and computational study of 2,4-di-chloro-N-[(E)-(5-nitro-thio-phen-2-yl)methyl-idene]aniline.
- Author
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Köysal Y, Bülbül H, Gümüş S, Ağar E, and Soylu MS
- Abstract
The title compound, C11H6Cl2N2O2S, is a Schiff base that incorporates an N-bound 2,4-di-chloro-phenyl and a C-bound 5-nitro-thio-phene ring. The mol-ecule is approximately planar, the maximum deviation from the mean plane being 0.233 (4) Å for the C=N N atom. The dihedral angle between the benzene and thio-phene rings is 9.7 (2)°. The C=N double bond has an E configuration. The crystal structure features C-H⋯O hydrogen bonds,forming sheets parallel to (10-1), and π-π stacking inter-actions between symmetry-related thio-phene and benzene rings, in which the distance between adjacent ring centroids is 3.707 (4) Å, forming a three-dimensional supramolecular structure. Geometric parameters from quantum-chemical calculations are in good agreement with experimental X-ray diffraction results.
- Published
- 2016
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45. Synthesis and investigation of intra-molecular charge transfer state properties of novel donor-acceptor-donor pyridine derivatives: the effects of temperature and environment on molecular configurations and the origin of delayed fluorescence.
- Author
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Aydemir M, Haykır G, Türksoy F, Gümüş S, Dias FB, and Monkman AP
- Abstract
A novel series of donor-acceptor-donor (D-A-D) structured pyridine derivatives were synthesised and detailed photo-physical investigations were made using mainly steady-state and time-resolved spectroscopy techniques at varying temperatures. The investigations showed that the molecules have solvent polarity and temperature dependent excited-state configurations, confirmed in two different polarity solvents (295-90 K), i.e. methyl cyclohexane (MCH) and 2-methyltetrahdrofurane (2-MeTHF). In MCH, the investigations revealed dual fluorescence over the temperature range of 295-90 K. At 295 K, the ground-state configuration of the molecules has a partially twisted geometry as determined by DFT calculation, yet the emission originates totally from a locally excited (LE) state, however once the temperature is lowered to 90 K, the twisted molecular configuration is stabilised, and the emission originates from a fully-relaxed intramolecular charge transfer state (ICT), this is contrary to the systems where structural reorganisation stabilises ICT and this is frozen out at low temperatures. The DFT calculations revealed different ground state molecular configurations due to the presence of different electron-donating groups, e.g. the molecule including anthracene groups has a near 90° twisted geometry whereas the triphenylamine including molecule has a pyramidal geometrical folding, therefore, the decrease in temperature restricts the donor degree of rotational freedom. In 2-MeTHF solution, the fluorescence spectrum of both molecules is always of ICT character, but gradually red-shifts through the fluid to glass transition temperature (∼135 K), in this case, the fluorescence occurs after structural and solvent-shell relaxations, however, upon cooling below 135 K, the spectra dramatically shift back to blue giving rise to strong emission from an ICT excited-state (but not the LE state) where the molecules have unrelaxed geometries. This significant change in the nature of the emitting species was explained with specific solvent-solute dynamic interactions in the vicinity of the solvation shell and the effect of thermal excitation of molecular vibrational modes of the C-C bond linking donor and acceptor units. Finally, we confirmed that the molecules have ICT ground-state geometry in the solid-state phase (spin-coated films), and the time-resolved decay dynamics were investigated comparing the spin-coated films (at RT and 25 K) and MCH solutions (at 295 K and 90 K).
- Published
- 2015
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46. Crystal structure, spectroscopic studies and quantum mechanical calculations of 2-[((3-iodo-4-methyl)phenylimino)methyl]-5-nitrothiophene.
- Author
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Özdemir Tarı G, Gümüş S, and Ağar E
- Subjects
- Crystallography, X-Ray, Electrons, Ethanol chemistry, Nonlinear Dynamics, Solvents, Spectrophotometry, Ultraviolet, Spectroscopy, Fourier Transform Infrared, Static Electricity, Thermodynamics, Vibration, Mechanical Phenomena, Models, Molecular, Quantum Theory, Thiophenes chemistry
- Abstract
The title compound, 2-[((3-iodo-4-methyl)phenylimino)methyl]-5-nitrothiophene, C12H9O2N2I1S1, was synthesized and characterized by IR, UV-Vis and single-crystal X-ray diffraction technique. The molecular structure was optimized at the B3LYP, B3PW91 and PBEPBE levels of the density functional method (DFT) with the 6-311G+(d,p) basis set. Using the TD-DFT method, the electronic absorption spectra of the title compound was computed in both the gas phase and ethanol solvent. The harmonic vibrational frequencies of the title compound were calculated using the same methods with the 6-311G+(d,p) basis set. The calculated results were compared with the experimental determination results of the compound. The energetic behavior such as the total energy, atomic charges, dipole moment of the title compound in solvent media were examined using the B3LYP, B3PW91 and PBEPBE methods with the 6-311G+(d,p) basis set by applying the Onsager and the polarizable continuum model (PCM). The molecular orbitals (FMOs) analysis, the molecular electrostatic potential map (MEP) and the nonlinear optical properties (NLO) for the title compound were obtained with the same levels of theory. And then thermodynamic properties for the title compound were obtained using the same methods with the 6-311G(d,p) basis set., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
- View/download PDF
47. Multimodality imaging in an adult patient with scimitar syndrome.
- Author
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Karaçalıoğlu AÖ, Gümüş S, Ince S, and Demirkol S
- Abstract
The "Scimitar syndrome" is a rare congenital anomaly characterized by combination of partial or complete pulmonary venous return from the right lung to the inferior vena cava either above or below the diaphragm together with hypoplasia of the right lung and sometimes systemic arterial supply to the right lung. In this case, multimodality imaging findings such as the vein draining into the inferior vena cava, the presence of hypertrophied and dilated right ventricle, the absence of other cardiac abnormalities, displacement of the heart without malrotation and the mediastinum to the right, normal bronchial and vascular continuity in the whole lung, absence of pulmonary sequestration and systemic collaterals, normal perfusion and systolic functions of the left ventricle were reported.
- Published
- 2014
- Full Text
- View/download PDF
48. Application of first-pass contrast bolus tracking sequence for the assessment of morphology and flow dynamics in cardiac MRI.
- Author
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Paksoy Y, Özbek O, Gümüş S, Koç O, Nayman A, and Kerimoğlu Ü
- Subjects
- Adolescent, Adult, Aged, Child, Child, Preschool, Contrast Media, Coronary Artery Disease diagnosis, Diagnosis, Differential, Female, Gadolinium DTPA, Heart Diseases pathology, Humans, Image Enhancement methods, Imaging, Three-Dimensional methods, Infant, Infant, Newborn, Male, Middle Aged, Myocardium pathology, Young Adult, Coronary Angiography methods, Coronary Circulation, Heart Diseases diagnosis, Magnetic Resonance Imaging methods
- Abstract
Purpose: There are two well-known indications for first-pass perfusion in the literature. First is the evaluation of myocardial ischemia, and the other is the evaluation of tumor vascularity. Our aim was to assess the value of a first-pass contrast bolus tracking sequence (FPCBTS) for cases unrelated to these pathologies., Materials and Methods: A total of 35 patients (age range, 1 day to 66 years; mean age, 10.4±19.2 years; median age, 4.5 months) with suspected congenital (n=31) and acquired (n=4) heart and great vessel disease were included in the study. All the patients underwent cardiac magnetic resonance imaging (MRI) and FPCBTS, and 20 patients underwent contrast enhanced magnetic resonance angiography (CE-MRA). We used cardiac MRI and CEMRA for anatomic evaluation and FPCBTS for dynamic flow evaluation., Results: Truncus arteriosus, double outlet right ventricle, tetralogy of Fallot, corrected transposition of great arteries, atrial and ventricular septal defect, aortic rupture, cardiac hydatid cyst, tricuspid atresia, anomalous pulmonary venous return, and interrupted aorta were detected using the technique described here. Septal defects in six patients and atrial aneurysm in two patients were excluded. The shunt gap and flow direction of the septal defects, a ruptured wall in a dissected aorta, a hydatid cyst, and the atrial relationship in two cases with paracardiac masses were diagnosed easily using this dynamic evaluation technique., Conclusion: FPCBTS can be performed in addition to cardiac MRI and CEMRA to reveal flow dynamics and morphology.
- Published
- 2013
- Full Text
- View/download PDF
49. Response.
- Author
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Kaya H, Gümüş S, Uçar E, Aydoğan M, Muşabak U, Tozkoparan E, and Bilgiç H
- Subjects
- Female, Humans, Anti-Allergic Agents therapeutic use, Antibodies, Anti-Idiotypic therapeutic use, Antibodies, Monoclonal, Humanized therapeutic use, Pulmonary Eosinophilia drug therapy
- Published
- 2013
- Full Text
- View/download PDF
50. (E)-3-chloro-N-((5-nitrothiophen-2-yl)methylene)aniline: a combined crystallographic, theoretical and antimicrobial activity investigation.
- Author
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Yılmaz I, Kazak C, Gümüş S, Ağar E, and Ardalı Y
- Subjects
- Aniline Compounds chemistry, Anti-Infective Agents chemistry, Bacteria drug effects, Crystallography, X-Ray, Microbial Sensitivity Tests, Molecular Conformation, Thermodynamics, Thiophenes chemistry, Vibration, Aniline Compounds pharmacology, Anti-Infective Agents pharmacology, Thiophenes pharmacology
- Abstract
The title molecule, (E)-3-chloro-N-((5-nitrothiophen-2-yl)methylene)aniline, (C(11)H(7)ClN(2)O(2)S), was synthesized and characterized by IR and single-crystal X-ray structure determination. The compound crystallizes in the monoclinic space group P2(1)/c. In addition, the molecular geometry, vibrational frequencies and frontier molecular orbitals analysis of the title compound in the ground state have been calculated by using the PM3 semi-empirical, HF/6-31G(d) and B3LYP/6-31G(d) ab initio methods. The results of the optimized molecular structure are exhibited and compared with the experimental X-ray diffraction and the calculated results are show that the optimized geometry can well reproduce the crystal structure. The Schiff base compounds are very important in medicinal and pharmaceutical fields because of their wide spectrum of biological activities. Most of them show biological activities such as antimicrobial, antifungal as well as antitumor activity. Therefore, (C(11)H(7)ClN(2)O(2)S) was investigated for their antimicrobial activities, Gram-positive and Gram-negative bacteria., (Copyright © 2012 Elsevier B.V. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
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