1. Making mathematical online resources FAIR: at the example of small phylogenetic trees
- Author
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Bacher, Tabea, Garrote-López, Marina, Görgen, Christiane, and Neubert, Marius
- Subjects
Mathematics - History and Overview ,Quantitative Biology - Populations and Evolution - Abstract
We report on the process of taking an early 2000's mathematical library, the Small Phylogenetic Trees, and transforming it into a FAIR, modern, and sustainable repository for data from algebraic phylogenetics. This process is based on a three-fold strategy: (1) writing a software package which enables the user to reproduce results of the database; (2) setting up a user-friendly new website with cross links to theoretical publications, code snippets, and serialized output of computations; and (3) all-the-while documenting the steps we take in order to derive lessons learned which may be generalised to other such projects. This paper addresses (3). (1) is found in https://docs.oscar-system.org/dev/Experimental/AlgebraicStatistics/phylogenetics, and (2) is located at https://algebraicphylogenetics.org., Comment: 10 pages, 3 figures, Version 0.1 of https://algebraicphylogenetics.org will be launched on Jan 24
- Published
- 2025