10 results on '"Fitzsimmons, Shayla"'
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2. Learning by Example: A Review of Successful Partnerships Involving Ocean Observing and Indigenous Traditional Ecological Knowledge
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Proulx, MaryJane, Fitzsimmons, Shayla, Ross, Lydia, Macdonald, Christina, and Smit, Michael
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ocean observing ,traditional ecological knowledge ,traditional knowledge - Abstract
This presentation was delivered at the Ocean Sciences Meeting 2022 (AGU/ASLO/TOS), in session IN03A Indigenous Partnerships for a Sustainable Ocean. A video of this presentation is available here: https://www.youtube.com/watch?v=Fj3mvxM8nwE Understanding and management of the marine environment requires respect for, and inclusion of, Indigenous knowledge, cultures, and traditional practices. The Aha Honua, an ocean observing declaration from Coastal Indigenous Peoples, calls on the ocean observing community to “formally recognize the traditional knowledge of Indigenous peoples,” and “to learn and respect each other’s ways of knowing.” For ocean observing systems, this will require broadening our understanding of data and data sharing, changing our approach to metadata, building relationships above and beyond our existing engagements, and recognizing that Indigenous coastal-dwelling communities have acted as caretakers and stewards of the lands and oceans for thousands of years. We recently completed a review of successful approaches to building information and data systems that incorporate Indigenous TEK, including a focus on building meaningful, reciprocal relationships. We identified approaches and projects, including cases where TEK has been collected, digitized and the meta(data) has been made open under some or all the FAIR principles. We identified enabling factors that notably contribute to successful outcomes in digitization, and mitigation measures to avoid the decontextualization of TEK. We provided a set of recommendations that are primarily value- and process-based, rather than action-based. The results were published as a white paper (2020) and journal article (2021). We’ll report on the results of this review, and discuss how it has influenced our practices, values, and activities at the Atlantic Regional Association of the Canadian Integrated Ocean Observing System (CIOOS Atlantic)., This work was supported financially by the Ocean Frontier Institute Seed Fund and Canada's Ocean Supercluster.
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- 2022
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3. Human Factors Impacting Open Data Availability: Individual Perspectives On Data Sharing
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Smit, Michael, Larose, Cassandra, Falvey, Conor, and Fitzsimmons, Shayla
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data sharing ,ocean observation data ,open science ,change management ,open data ,research data management ,individual perspectives ,psychology ,ocean data management - Abstract
This is a presentation delivered as part of Ocean Sciences Meeting 2022 (AGU/ASLO/TOS), in session OD07: Sharing the Wealth: Overcoming Barriers and Finding Opportunities for Community-Based Solutions to Data Sharing. A video of this presentation being delivered is available here: https://www.youtube.com/watch?v=gxuabDp-LrQ We present the results of a scoping review on how human factors introduce or influence barriers to sharing open data, and what interventions have been attempted to mitigate these barriers. Ocean research is undergoing a transition from data scarcity to data abundance, which requires a fundamental shift in how we view data: from a resource to be protected to a resource we can only effectively utilize through collaboration. Organizations and funding agencies generally recognize the importance of sharing research data openly. Yet the psychology of scarcity is a powerful, enduring force on individuals. Our review included literature from the past decade that mentioned open data or research data in proximity to discussions of barriers, factors, and other synonyms. Our initial search retrieved 1200+ articles, of which 58 met all inclusion criteria. These papers varied in geography, methods, year of publication, and scope. We extracted all primary results relevant to our review and produced a narrative synthesis. We conclude individual perspectives will always be intertwined with factors like organizational structures, incentive systems, resource availability, and perceptions of institutional culture (system-level factors). In fact, personal opinion on the benefits of data sharing influences whether individuals perceive barriers or not. There has been little work to disentangle these factors. We will summarize the human factors identified in the literature in five themes: perceived lack of time/resources; a lack of organizational / institutional norms (“culture”); concern about not having the skills required; concern that they would not be able to benefit from their data collection work, including initial publication and appropriate credit; and the possibility that mistakes would be discovered. We’ll also reflect on how the results influence our user engagement practices at the Canadian Integrated Ocean Observing System (CIOOS) Atlantic., Individual Perspectives on Data Sharing: Human Factors Impacting the Digital Economy is co-funded by the Social Sciences and Humanities Research Council and the Government of Canada's Future Skills program. We gratefully acknowledge the support of Fisheries and Oceans Canada, MEOPAR NCE, Tula Foundation, and the Ocean Frontier Institute in providing the context and opportunity for CIOOS Atlantic to thoughtfully consider data sharing.
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- 2022
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4. CIOOS: Scaling Up in this Ocean Decade
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Fitzsimmons, Shayla, Jenkyns, Reyna, Smit, Michael, Brunsting, Ray, Deschamps, Ryan, Thupaki, Pramod, and Munroe, James
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ocean observation ,UN Ocean Decade ,ocean data management - Abstract
This is a presentation delivered as part of Ocean Sciences Meeting 2022 (AGU/ASLO/TOS), in session OS11: Observing and Predicting the Global Coastal Ocean 03. This presentation was recorded and is available here:https://www.youtube.com/watch?v=GKi7ZlCfQYk The Canadian Integrated Ocean Observing System (CIOOS) launched in 2019, following a decade of initiatives seeking nationally coordinated ocean observations. CIOOS completed its pilot phase, where it built infrastructure, defined metadata standards, prioritized EOVs, and established relationships. As we embark on the UN Ocean Decade and Canada’s contribution to a transparent and predictable ocean, we identify five 10-year horizon key challenges. 1. Streams and scale: We anticipate a transition from mostly static data to streams in the cloud. This will strain our capacity and conceptual models. This means investment in data processing infrastructure, co-locating analysis with data, and building ocean-to-desktop systems. 2. Principles and practices: CIOOS seeks to meet the FAIR, CARE and TRUST Principles, and to integrate and develop best practices relevant to the oceanographic and data management communities. Key focus areas include biological data, marine debris and model outputs. 3. Indigenous data and knowledge: CIOOS is forming partnerships with First Nations in coastal areas. Through co-design, CIOOS can integrate digital frameworks that meet the CARE (Collective benefit, Authority to control, Responsibility and Ethics) Principles and recognize sensitive data concerns. The application of Traditional Knowledge and Biocultural labels is a plausible approach for customizable data usage constraints. 4. Private sector engagement: These companies are an important producer and user of data. The underway VITALITY project has a mission to facilitate sharing of private sector data and to deliver outcomes that will build the blue economy. 5. Global collaboration: CIOOS recognizes partnerships and interoperability with observatories in adjacent waters are essential for applications that transcend national borders. Plans include participation in international working groups, co-development with the US IOOS, and data inputs to the Global Telecommunications System.
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- 2022
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5. Canadian Integrated Ocean Observing System: Cyberinfrastructure Investigative Evaluation
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Smit, Mike, primary, Kelly, Richard, additional, Bruce, Scott, additional, Bulger, Craig, additional, Covey, Brad, additional, Davis, Richard, additional, Fitzsimmons, Shayla, additional, Gosse, Ryan, additional, Owens, Dwight, additional, and Pirenne, Benoît, additional
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- 2017
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6. Indigenous Traditional Ecological Knowledge and Ocean Observing: A Review of Successful Partnerships
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Proulx, MaryJane, primary, Ross, Lydia, additional, Macdonald, Christina, additional, Fitzsimmons, Shayla, additional, and Smit, Michael, additional
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- 2021
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7. Intact proteome fractionation strategies compatible with mass spectrometry
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Doucette, Alan A, Tran, John C, Wall, Mark J, and Fitzsimmons, Shayla
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- 2011
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8. Canadian Integrated Ocean Observing System: Investigative evaluations cyberinfrastructure
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Kelly, Richard, Smit, Mike, Fitzsimmons, Shayla, Bruce, Scott, Bulger, Craig, Covey, Brad, Davis, Richard, Gosse, Ryan, Owens, Dwight, and Pirenne, Benoit
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Data archival/stewardship/curation ,Cyberinfrastructure ,Ocean observing systems ,Cross-discipline - Abstract
Numerous countries have employed a coordinated network of government agencies, research institutions, and private companies to establish national integrated Ocean Observing Systems (OOSes). Although Canada boasts a robust and diverse ocean economy, the country has implemented no such network To better adapt in the face of a changing environment and to assist the country in meeting national and international commitments, Fisheries and Oceans Canada (DFO) has commissioned investigative evaluations (IEs) to determine the cost and feasibility of creating a Canadian Integrated Ocean Observing System (CIOOS). This report contains the recommendations of the Cyberinfrastructure IE, and outlines three models, low, moderate and high, with varying levels of service. To determine an appropriate cyberinfrastructure configuration for CIOOS, information was gathered from both national and international sources. Systems and standards were evaluated, stakeholders surveyed, and existing international OOSes consulted to identify potential limits or gaps to the implementation of CIOOS. Published Refereed Current 14.a Mature Validated (tested by third parties) Multi-organisational National Reports with methodological relevance
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- 2017
9. Top-Down and Bottom-Up Proteomics of SDS-Containing Solutions Following Mass-Based Separation
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Botelho, Diane, Wall, Mark J., Vieira, Douglas B., Fitzsimmons, Shayla, Liu, Fang, and Doucette, Alan
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SDS has recognized benefits for protein sample preparation, including solubilization and imparting molecular weight separation (e.g., SDS-PAGE). Here, we compare two proteome workflows which incorporate SDS for protein separation, namely, SDS-PAGE coupled to LC/MS (GeLC MS), along with a solution separation platform, GELFrEE, for intact proteome prefractionation and identification. Despite the clear importance of SDS in these and other proteome analysis workflows, the affect of SDS on an LC/MS proteome experiment has not been quantified. We first examined the influence of SDS on both a bottom-up as well as a top-down (intact protein) MS workflow. Surprisingly, at levels up to 0.01% SDS in the injected sample, reliable MS characterization is obtained. We subsequently explored organic precipitation protocols (chloroform/methanol/water and acetone) as a means of lowering SDS, and present a simple modified acetone precipitation protocol which consistently enables MS proteome characterizations from samples initially containing 2% SDS. With this effective strategy for SDS reduction, the GELFrEE MS workflow for bottom-up proteome analysis was characterized relative to GeLC MS. Remarkable agreement in the number and type of identified proteins was obtained from these two separation platforms, validating the use of SDS in solution-phase proteome analysis.
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- 2024
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10. Top-Down and Bottom-Up Proteomics of SDS-Containing Solutions Following Mass-Based Separation
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Botelho, Diane, primary, Wall, Mark J., additional, Vieira, Douglas B., additional, Fitzsimmons, Shayla, additional, Liu, Fang, additional, and Doucette, Alan, additional
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- 2010
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