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Microbes living in plant tissues—endophytes—are mainly studied in crop plants where they typically colonize the root apoplast. Trees—a large carbon source with a high capacity for photosynthesis—provide a variety of niches for endophytic colonization. We have earlier identified a new type of plant–endophyte interaction in buds of adult Scots pine, where Methylorubrum species live inside the meristematic cells. The endosymbiont Methylorubrum extorquens DSM13060 significantly increases needle and root growth of pine seedlings without producing plant hormones, but by aggregating around host nuclei. Here, we studied gene expression and metabolites of the pine host induced by M. extorquens DSM13060 infection. Malic acid was produced by pine to potentially boost M. extorquens colonization and interaction. Based on gene expression, the endosymbiont activated the auxin- and ethylene (ET)-associated hormonal pathways through induction of CUL1 and HYL1 , and suppressed salicylic and abscisic acid signaling of pine. Infection by the endosymbiont had an effect on pine meristem and leaf development through activation of GLP1-7 and ALE2 , and suppressed flowering, root hair and lateral root formation by downregulation of AGL8 , plantacyanin , GASA7 , COW1 and RALFL34. Despite of systemic infection of pine seedlings by the endosymbiont, the pine genes CUL1 , ETR2, ERF3 , HYL , GLP1-7 and CYP71 were highly expressed in the shoot apical meristem, rarely in needles and not in stem or root tissues. Low expression of MERI5, CLH2 , EULS3 and high quantities of ononitol suggest that endosymbiont promotes viability and protects pine seedlings against abiotic stress. Our results indicate that the endosymbiont positively affects host development and stress tolerance through mechanisms previously unknown for endophytic bacteria, manipulation of plant hormone signaling pathways, downregulation of senescence and cell death-associated genes and induction of ononitol biosynthesis. [ABSTRACT FROM AUTHOR]

Our experiments were focused on the metabolic footprint of mineral-nutrient availability under field conditions. While there are multiple factors potentially blurring such footprints, we hypothesized that physiological and metabolic adaptations of established plants are particularly important mechanisms under field conditions. To study respective differences between young and established plants and to study the impact of disturbances on the adaptive capacity of established plants, we analyzed Medicago sativa plants of different age from plots with marked differences in the levels of soil mineral nutrients established in a long-term fertilization experiment. Gas chromatography-mass spectrometry was used to determine metabolite profiles of sink and source leaves of plants in an early state of development ('young plants'), just before the first harvest ('established plants'), and a short time after the second harvest ('regrowing plants'). Metabolite profiles from young plants were markedly responsive to soil mineral nutrients and resembled respective profiles from controlled conditions, demonstrating that overall variability of growth and sampling conditions had relatively little importance for the metabolite profiles recorded. In the case of established plants, however, we observed only little impact of availability of mineral nutrients on metabolite profiles. This low metabolic responsiveness of plants was partially lost after severe disturbances (removal of the plant shoot). Metabolite profiling, in summary, is able to detect a metabolic footprint of mineral-nutrient availability in young plants under field conditions and may provide information about the ability of older plants to partially uncouple their metabolism from the environment. In addition, it is also possible to determine the impact of disturbances on this ability of the plant organism. [ABSTRACT FROM AUTHOR]

Arbuscular mycorrhizal fungi ( AMF), which are present in most natural environments, have demonstrated capacity to promote biodegradation of organic pollutants in the greenhouse. However, it is not certain whether AMF can spontaneously establish in phytoremediation systems constructed to decontaminate groundwater, because of the unusual conditions during the construction and operation of such systems. To assess this possibility, root samples from a wetland constructed for the phytoremediation of groundwater contaminated with benzene, methyl tert-butyl ether and ammonia were analysed. Substantial AMF colonization was observed in plant roots sampled close to the inlet of a basin filled with fine gravel and planted with Phragmites australis. In addition, analysis of a fragment of the nuclear large ribosomal subunit, amplified by nested PCR, revealed the presence of AMF molecular operational taxonomic units closely related to Funneliformis mosseae and Rhizophagus irregularis in the samples. These findings demonstrate the capacity of generalist AMF strains to establish spontaneously, rapidly and extensively in groundwater bioremediation technical installations. [ABSTRACT FROM AUTHOR]

Abstract: The accumulation of apocarotenoids in arbuscular mycorrhizal (AM) roots suggests a dramatic reorganization of the plastids responsible for the biosynthesis of these compounds. This review describes the cytological and biochemical characterization of this phenomenon. The results presented suggest that plastids are key organelles for the establishment of the symbiotic interface of the AM symbiosis. In addition, a complex interplay of various plant cell components during the different functional phases of this interface is suggested. Arbuscule degradation appears to be of particular interest, as it correlates with the formation of the most extensive plastid structures and with apocarotenoid accumulation. [Copyright &y& Elsevier]