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Tropical forests occupy small coral atolls to the vast Amazon basin. They occur across bioregions with different geological and climatic history. Differences in area and bioregional history shape species immigration, extinction and diversification. How this effects local diversity is unclear. The Indonesian archipelago hosts thousands of tree species whose coexistence should depend upon these factors. Using a novel dataset of 215 Indonesian forest plots, across fifteen islands ranging in area from 120 to 785 000 km2, we apply Gaussian mixed effects models to examine the simultaneous effects of environment, earthquake proximity, island area and bioregion upon tree diversity for trees ≥ 10 cm diameter at breast height. We find that tree diversity declines with precipitation seasonality and increases with island area. Accounting for the effects of environment and island area we show that the westernmost bioregion Sunda has greater local diversity than Wallacea, which in turn has greater local diversity than easternmost Sahul. However, when the model includes geological activity (here proximity to major earthquakes), bioregion differences are reduced. Overall, results indicate that multi‐scale, current and historic effects dictate tree diversity. These multi‐scale drivers should not be ignored when studying biodiversity gradients and their impacts upon ecosystem function. [ABSTRACT FROM AUTHOR]

The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher's alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between ∼40,000 and ∼53,000, i.e., at the high end of previous estimates. Contrary to common assumption, the Indo-Pacific region was found to be as species-rich as the Neotropics, with both regions having a minimum of ∼19,000-25,000 tree species. Continental Africa is relatively depauperate with a minimumof ∼4,500-6,000 tree species. Very few species are shared among the African, American, and the Indo-Pacific regions. We provide a methodological framework for estimating species richness in trees that may help refine species richness estimates of tree-dependent taxa. [ABSTRACT FROM AUTHOR]

Aim Forest fragmentation is often accompanied by an increase in hunting intensity. Both factors are known drivers of species extirpations, but understanding of their independent effects is poor. Our goal was to partition the effects of hunting and fragmentation on bird species extirpations and to identify bird traits that make species more vulnerable to these two stressors. Location Menglun, Yunnan, SW China Methods We studied the landscape within 10 km radius of Menglun town, where forests have become highly fragmented by monoculture rubber plantations. We compiled data on birds recorded between 1954 and 1983 before forest loss and compared it with a checklist prepared between 2011 and 2014. We used countryside and matrix-calibrated species-area models (SAMs) to estimate the observed slope of forest bird extirpations in Menglun and compared it with the slope expected in the absence of hunting. We also investigated six ecological traits to determine those that best explained bird extirpation probability (EP). Results We found that 34% of the bird fauna had been extirpated from the study landscape, and the estimated slopes of countryside and matrix-calibrated SAMs for forest birds were around 1.4 and 1.7 times higher, respectively, than the 0.35 expected without hunting. Bird EP was strongly associated with size, and understorey insectivores that are known to be susceptible to fragmentation were less susceptible to hunting than frugivores. Given evidence of past and present hunting activity in the area, and the lack of support for alternative explanations, we suggest that hunting increased forest bird extirpations by around 1.3- to 1.6-fold. Conclusions This study highlights the importance of using species-area relationships to separate area effects from the impacts of hunting. Our results suggest that hunting substantially increases species extirpations in tropical fragmented landscapes and conservation interventions that only target deforestation will therefore be inadequate. [ABSTRACT FROM AUTHOR]

The extent of Dipterocarp rainforests on the emergent Sundaland landmass in Southeast Asia during Quaternary glaciations remains a key question. A better understanding of the biogeographic history of Sundaland could help explain current patterns of biodiversity and support the development of effective forest conservation strategies. Dipterocarpaceae trees dominate the rainforests of Sundaland, and their distributions serve as a proxy for rainforest extent. We used species distribution models (SDMs) of 317 Dipterocarp species to estimate the geographic extent of appropriate climatic conditions for rainforest on Sundaland at the last glacial maximum (LGM). The SDMs suggest that the climate of central Sundaland at the LGM was suitable to sustain Dipterocarp rainforest, and that the presence of a previously suggested transequatorial savannah corridor at that time is unlikely. Our findings are supported by palynologic evidence, dynamic vegetation models, extant mammal and termite communities, vascular plant fatty acid stable isotopic compositions, and stable carbon isotopic compositions of cave guano profiles. Although Dipterocarp species richness was generally lower at the LGM, areas of high species richness were mostly found off the current islands and on the emergent Sunda Shelf, indicating substantial species migration and mixing during the transitions between the Quaternary glacial maxima and warm periods such as the present. [ABSTRACT FROM AUTHOR]

Rapidly changing land use in Southeast Asia threatens plant diversity, and reduces the time we have left to document it. Despite over 200 years of scientific plant exploration, many plant species have yet to be discovered. Moreover, we still have a very poor understanding of the distribution of known taxa in this biogeographically complex region. We review the current state of biodiversity exploration, using plants in Indonesia as an example. Traditional methods of collecting and describing species have provided a solid foundation for our understanding of plant biodiversity, but are insufficient for the pragmatic task of rapidly discovering and documenting today's biodiversity before it is gone, because general collecting expeditions tend to be infrequent, and documentation of most new species must await taxonomic revisions many years in the future. Solutions to this exploration and documentation crisis (i) could use the abundant resource of enthusiastic, networked, national biology students, (ii) should employ biodiversity informatics tools to efficiently engage both specialists and parataxonomists, and (iii) might require adoption of new types of a-taxonomy, utilizing increasingly low-cost molecular methods and high resolution photographs. We describe emerging technologies that will facilitate this taxonomic development. We believe that a new golden age of biodiversity exploration may be dawning, just as biodiversity itself is most threatened, and are hopeful that increasing knowledge of biodiversity will be a positive force to slow its loss. [ABSTRACT FROM AUTHOR]