1. Omics-derived biological modules reflect metabolic brain changes in Alzheimer's disease.
- Author
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Povala G, De Bastiani MA, Bellaver B, Ferreira PCL, Ferrari-Souza JP, Lussier FZ, Souza DO, Rosa-Neto P, Pascoal TA, Zatt B, and Zimmer ER
- Subjects
- Humans, Male, Female, Aged, Transcriptome, Hippocampus metabolism, Hippocampus diagnostic imaging, Cognitive Dysfunction metabolism, Cognitive Dysfunction genetics, Cognitive Dysfunction diagnostic imaging, Aged, 80 and over, Alzheimer Disease metabolism, Alzheimer Disease genetics, Alzheimer Disease diagnostic imaging, Positron-Emission Tomography, Fluorodeoxyglucose F18 metabolism, Brain metabolism, Brain diagnostic imaging
- Abstract
Introduction: Brain glucose hypometabolism, indexed by the fluorodeoxyglucose positron emission tomography ([
18 F]FDG-PET) imaging, is a metabolic signature of Alzheimer's disease (AD). However, the underlying biological pathways involved in these metabolic changes remain elusive., Methods: Here, we integrated [18 F]FDG-PET images with blood and hippocampal transcriptomic data from cognitively unimpaired (CU, n = 445) and cognitively impaired (CI, n = 749) individuals using modular dimension reduction techniques and voxel-wise linear regression analysis., Results: Our results showed that multiple transcriptomic modules are associated with brain [18 F]FDG-PET metabolism, with the top hits being a protein serine/threonine kinase activity gene cluster (peak-t(223) = 4.86, P value < 0.001) and zinc-finger-related regulatory units (peak-t(223) = 3.90, P value < 0.001)., Discussion: By integrating transcriptomics with PET imaging data, we identified that serine/threonine kinase activity-associated genes and zinc-finger-related regulatory units are highly associated with brain metabolic changes in AD., Highlights: We conducted an integrated analysis of system-based transcriptomics and fluorodeoxyglucose positron emission tomography ([18 F]FDG-PET) at the voxel level in Alzheimer's disease (AD). The biological process of serine/threonine kinase activity was the most associated with [18 F]FDG-PET in the AD brain. Serine/threonine kinase activity alterations are associated with brain vulnerable regions in AD [18 F]FDG-PET. Zinc-finger transcription factor targets were associated with AD brain [18 F]FDG-PET metabolism., (© 2024 The Author(s). Alzheimer's & Dementia published by Wiley Periodicals LLC on behalf of Alzheimer's Association.)- Published
- 2024
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