1. Screening of common genetic variants in the APOB gene related to familial hypercholesterolemia in a Saudi population: A case-control study
- Author
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Khalid Khalaf Alharbi, Fawaziah Khalaf Alharbi, Noor Ahmad Shaik, Turky H. Almigbal, Imran Ali Khan, and Mohammed A. Batais
- Subjects
Adult ,Male ,Apolipoprotein B ,Genotype ,Population ,Saudi Arabia ,Observational Study ,Familial hypercholesterolemia ,Saudi population ,Polymerase Chain Reaction ,Polymorphism, Single Nucleotide ,Hyperlipoproteinemia Type II ,03 medical and health sciences ,0302 clinical medicine ,Gene Frequency ,Polymorphism (computer science) ,medicine ,Odds Ratio ,Humans ,030212 general & internal medicine ,education ,Allele frequency ,rs151009667 ,Genetics ,education.field_of_study ,biology ,familial hypercholesterolemia ,business.industry ,PCSK9 ,General Medicine ,Odds ratio ,Middle Aged ,medicine.disease ,Arabs ,Val2095Glu ,ApoB gene ,030220 oncology & carcinogenesis ,Case-Control Studies ,Apolipoprotein B-100 ,biology.protein ,Female ,business ,Polymorphism, Restriction Fragment Length ,Research Article - Abstract
Familial hypercholesterolemia (FH) is a monogenic dominant inherited disorder of lipid metabolism characterized by elevated low-density lipoprotein levels, and is mainly attributable to mutations in low-density lipoprotein receptor (LDLR), apolipoprotein B (APOB), and proportein convertase subtilisin/kexin type 9 (PCSK9) genes. Next-generation and exome sequencing studies have primarily involved genome-wide association analyses, and meta-analyses and next-generation studies examined a few single-nucleotide polymorphisms (rs151009667 and Val2095Glu) in the ApoB gene. The present study was conducted to investigate the association of APOB and patients with FH in a Saudi population. We genotyped 100 patients with FH and 100 controls for 2 polymorphisms in APOB using polymerase chain reaction-restriction fragment length polymorphism, followed by 3% agarose gel electrophoresis. The strength of the association between the genotype and allele frequencies with the risk of developing FH was evaluated. Clinical details and genotype analysis results were recorded. For the rs151009667 polymorphism, 18% of the CT genotypes were observed only in patients with FH. There was a positive association between CT and CC (odds ratio [OR] 45.07 [95% conflict of interest (CI), 2.67โ759.1]; P = .0001) and between T and C (OR 87.8 [95% CI, 5.34โ144.2]; P
- Published
- 2019