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1. Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion

Author

Varriale, Simona, Houbraken, Jos, Granchi, Zoraide, Pepe, Olimpia, Cerullo, Gabriella, Ventorino, Valeria, Chin-A-Woeng, Thomas, Meijer, Martin, Riley, Robert, Grigoriev, Igor V, Henrissat, Bernard, de Vries, Ronald P, and Faraco, Vincenza

Subjects
Microbiology, Biological Sciences, Genetics, Biotechnology, Biotransformation, Carbohydrate Metabolism, Enzymes, Genome, Fungal, Italy, Lignin, Phylogeny, Poaceae, Sequence Analysis, DNA, Talaromyces, Fungi, genome sequence, taxonomy, new taxon, Evolutionary Biology, Plant Biology, Mycology & Parasitology, Evolutionary biology, Plant biology
Abstract

A novel fungal species able to synthesize enzymes with potential synergistic actions in lignocellulose conversion was isolated from the biomass of Arundo donax during biodegradation under natural conditions in the Gussone Park of the Royal Palace of Portici (Naples, Italy). In this work, this species was subjected to morphological and phylogenetic analyses. Sequencing of its genome was performed, resulting in 28 scaffolds that were assembled into 27.05 Mb containing 9744 predicted genes, among which 396 belong to carbohydrate-active enzyme (CAZyme)-encoding genes. Here we describe and illustrate this previously unknown species, which was named Talaromyces borbonicus, by a polyphasic approach combining phenotypic, physiological, and sequence data.

Published
2018

10. Contributors

Author

Abraham, Amith, primary, Addy, Min, additional, Ahmad Shuhaili, Ahmad Fadzil, additional, Alves, Catarina M., additional, Ameen, Mariam, additional, Anderson, Erik, additional, Angelidaki, Irini, additional, Atiyeh, Hasan K., additional, Awasthi, Ayushi, additional, Azizan, Mohammad Tazli, additional, Ballesteros, M., additional, Banu, J. Rajesh, additional, Bhaskar, Thallada, additional, Binod, Parameswaran, additional, Biswas, Bijoy, additional, Bokhari, Awais, additional, Boonsawang, Piyarat, additional, Cha, Minseok, additional, Chadha, Bhupinder Singh, additional, Chaiprapat, Sumate, additional, Chang, In Seop, additional, Chang, Jo-Shu, additional, Cheah, Kin Wai, additional, Chen, Paul, additional, Cheng, Yanling, additional, Dhyani, Vaibhav, additional, Ding, Kuan, additional, Fan, Liangliang, additional, Faraco, Vincenza, additional, Gnansounou, Edgard, additional, Gottumukkala, Lalitha Devi, additional, Gunasekaran, M., additional, Gurdeep Singh, Haswin Kaur, additional, Jamalluddin, Nur Azimah, additional, Janu, Kanakambaran Usha, additional, Ju, Yi-Hsu, additional, Karimi, Keikhosro, additional, Karp, Susan G., additional, Kaur, Rajwinder, additional, Khanal, Samir Kumar, additional, Kim, Sang-Hyoun, additional, Kougias, Panagiotis G., additional, Krishna, Bhavya B., additional, Kumar, Jitendra, additional, Kumar, Lalit R., additional, Kumar, Mayank, additional, Kumar, Amit, additional, Kumar, Gopalkrishnan, additional, Lam, Man Kee, additional, Lee, Keat Teong, additional, Lee, Duu-Jong, additional, Lei, Hanwu, additional, Lemmer, Andreas, additional, Li, Bingxi, additional, Liu, Shiyu, additional, Liu, Yuhuan, additional, Liu, Yu, additional, Luo, Gang, additional, Ma, Yingqun, additional, Mahajan, Chhavi, additional, Mathew, Anil K, additional, Merrylin, J., additional, Millati, Ria, additional, Moreno, A.D., additional, Munasinghe, Pradeep, additional, Munoz, Raul, additional, Murthy, Ganti S., additional, Nagarajan, Dillirani, additional, Negro, M.J., additional, Nguyen, Duc, additional, Nitayavardhana, Saoharit, additional, Oechsner, Hans, additional, Ong, Lu Ki, additional, Osman, Noridah, additional, Oyedun, Adetoyese Olajire, additional, Pandey, Ashok, additional, Panichnumsin, Pornpan, additional, Patel, Anil K., additional, Patrick, David Onoja, additional, Peng, Peng, additional, Pruvost, Jeremy, additional, Rai, Rohit, additional, Raman, Jegannathan Kenthorai, additional, Ramli, Anita, additional, Ruan, Roger, additional, Sanjaya, Adhitya Pitara, additional, Saritpongteeraka, Kanyarat, additional, Sawatdeenarunat, Chayanon, additional, Shahbaz, Muhammad, additional, Show, Pau Loke, additional, Show, Kuan-Yeow, additional, Sindhu, Raveendran, additional, Singhania, Reeta Rani, additional, Soccol, Carlos Ricardo, additional, Songkasiri, Warinthorn, additional, Sukumaran, Rajeev Kumar, additional, Surendra, K.C., additional, Taherzadeh, Mohammad J., additional, Tan, Kok Tat, additional, Tan, Chung Hong, additional, Thomaz-Soccol, Vanete, additional, Tomás-Pejó, E., additional, Tran, Nguyen Phuong Lan, additional, Trinh, Huong, additional, Tyagi, Rajeshwar Dayal, additional, Usman, T. M. Mohamed, additional, Vandenberghe, Luciana P.S., additional, Wang, Yunpu, additional, Wangnai, Chinnapong, additional, Wikandari, Rachma, additional, Woiciechowski, Adenise L., additional, Xie, Li, additional, Yan, Yue-Gen, additional, Yasin, Muhammad, additional, Yellapu, Sravan Kumar, additional, Yusup, Suzana, additional, Zhang, Yaning, additional, Zhang, Xiaolei, additional, Zhang, Yifeng, additional, and Zhou, Nan, additional

Published
2019
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23. Enhancing Succinic Acid Production by Sequential Adaptation of Selected Basfia succiniciproducens Strains to Arundo donax Hydrolysate.

Author

Robertiello, Alessandro, Romano, Ida, Ventorino, Valeria, Faraco, Vincenza, and Pepe, Olimpia

Subjects
SUCCINIC acid, LIGNOCELLULOSE, GIANT reed, STAGE adaptations, POISONS, FOSSIL fuels
Abstract

Promising green technologies that can overcome the challenges associated with the use of fossil fuels require microorganisms that can effectively ferment lignocellulosic hydrolysate for biochemical production with reduced sensitivity to toxic chemicals derived from the pretreatment process. In this study, a sequential adaptation approach was developed to obtain new bacterial lines from Basfia (B.) succiniciproducens strains, which are adapted to inhibitory compounds of the Arundo (A.) donax hydrolysate or those that accumulate during the fermentation process. The early adaptation stages resulted in newly adapted B. succiniciproducens bacterial lines that can tolerate fermentation end-products such as acetic, lactic, and succinic acids, as well as toxic compounds such as furfural and hydroxymethylfurfural. These adapted bacterial lines were further investigated to assess their ability to produce succinic acid in an MHM medium supplemented with a filtrate of A. donax hydrolysate. Batch growth tests on a small laboratory scale showed that bacterial lines 2E and 4D produced 5.80 ± 0.56 g L−1 and 5.81 ± 0.39 g L−1 of succinic acid, respectively, after 24 h of fermentation. Based also on its growth rate, the adapted bacterial line B. succiniciproducens 4D was selected for tests in a lab-scale fermenter, where it was able to synthesize up to 17.24 ± 0.39 g L−1 of succinate (corresponding to YSA/gluc 0.96 ± 0.02 g g−1 and to YSA/(G + X) 0.48 ± 0.01 g g−1) from MHM medium added with A. donax hydrolysate. Experiments showed an increase of ~17% compared to the control strain. The overall results demonstrate the potential of adapted bacterial lines for succinate production from A. donax hydrolysate and the development of improved technologies for bio-based succinic acid production. [ABSTRACT FROM AUTHOR]

Published
2023
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49. Fungal Laccases

Author

Piscitelli, Alessandra, primary, Pezzella, Cinzia, additional, Lettera, Vincenzo, additional, Giardina, Paola, additional, Faraco, Vincenza, additional, and Sannia, Giovanni, additional

Published
2013
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