3,070 results on '"FENG SHEN"'
Search Results
2. Precision-Engineered Construction of Proton-Conducting Metal–Organic Frameworks
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Liyu Zhu, Hongbin Yang, Ting Xu, Feng Shen, and Chuanling Si
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MOFs ,Proton conduction ,Porous materials ,Fuel cells ,Technology - Abstract
Highlights The effects of the size structure and stability of metal–organic frameworks (MOFs) on proton conduction are comprehensively summarized. Advanced strategies for constructing proton conduction MOFs are critically discussed. Challenges and opportunities for the development of novel proton-conducting MOFs are further outlined.
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- 2024
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3. Calcium modulates the tethering of BCOR-PRC1.1 enzymatic core to KDM2B via liquid-liquid phase separation
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Rui Chen, Feng Shen, Yulong Zhang, Mingze Sun, Yan Dong, Yue Yin, Chen Su, Chao Peng, Jinsong Liu, and Jinxin Xu
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Biology (General) ,QH301-705.5 - Abstract
Abstract Recruitment of non-canonical BCOR-PRC1.1 to non-methylated CpG islands via KDM2B plays a fundamental role in transcription control during developmental processes and cancer progression. However, the mechanism is still largely unknown on how this recruitment is regulated. Here, we unveiled the importance of the Poly-D/E regions within the linker of BCOR for its binding to KDM2B. Interestingly, we also demonstrated that these negatively charged Poly-D/E regions on BCOR play autoinhibitory roles in liquid-liquid phase separation (LLPS) of BCORANK-linker-PUFD/PCGF1RAWUL. Through neutralizing negative charges of these Poly-D/E regions, Ca2+ not only weakens the interaction between BCOR/PCGF1 and KDM2B, but also promotes co-condensation of the enzymatic core of BCOR-PRC1.1 with KDM2B into liquid-like droplet. Accordingly, we propose that Ca2+ could modulate the compartmentation and recruitment of the enzymatic core of BCOR-PRC1.1 on KDM2B target loci. Thus, our finding advances the mechanistic understanding on how the tethering of BCOR-PRC1.1 enzymatic core to KDM2B is regulated.
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- 2024
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4. The functional role of m6A demethylase ALKBH5 in cardiomyocyte hypertrophy
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Chen Meng, Haibi Su, Meiling Shu, Feng Shen, Yijie Lu, Shishi Wu, Zhenghua Su, Mengyao Yu, and Di Yang
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Cytology ,QH573-671 - Abstract
Abstract Cardiomyocyte hypertrophy is a major outcome of pathological cardiac hypertrophy. The m6A demethylase ALKBH5 is reported to be associated with cardiovascular diseases, whereas the functional role of ALKBH5 in cardiomyocyte hypertrophy remains confused. We engineered Alkbh5 siRNA (siAlkbh5) and Alkbh5 overexpressing plasmid (Alkbh5 OE) to transfect cardiomyocytes. Subsequently, RNA immunoprecipitation (RIP)-qPCR, MeRIP-qPCR analysis and the dual-luciferase reporter assays were applied to elucidate the regulatory mechanism of ALKBH5 on cardiomyocyte hypertrophy. Our study identified ALKBH5 as a new contributor of cardiomyocyte hypertrophy. ALKBH5 showed upregulation in both phenylephrine (PE)-induced cardiomyocyte hypertrophic responses in vitro and transverse aortic constriction (TAC)/high fat diet (HFD)-induced pathological cardiac hypertrophy in vivo. Knockdown or overexpression of ALKBH5 regulated the occurrence of hypertrophic responses, including the increased cardiomyocyte surface areas and elevation of the hypertrophic marker levels, such as brain natriuretic peptide (BNP) and atrial natriuretic peptide (ANP). Mechanically, we indicated that ALKBH5 activated JAK2/STAT3 signaling pathway and mediated m6A demethylation on Stat3 mRNA, but not Jak2 mRNA, resulting in the phosphorylation and nuclear translocation of STAT3, which enhances the transcription of hypertrophic genes (e.g., Nppa) and ultimately leads to the emergence of cardiomyocytes hypertrophic growth. Our work highlights the functional role of ALKBH5 in regulating the onset of cardiomyocyte hypertrophy and provides a potential target for hypertrophic heart diseases prevention and treatment. ALKBH5 activated JAK2/STAT3 signaling pathway and mediated m6A demethylation on Stat3 mRNA, but not Jak2 mRNA, resulting in the phosphorylation and nuclear translocation of STAT3, which enhances the transcription of hypertrophic genes (e.g., Nppa) and ultimately leads to the emergence of cardiomyocytes hypertrophic growth.
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- 2024
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5. Isoliquiritigenin attenuates myocardial ischemia reperfusion through autophagy activation mediated by AMPK/mTOR/ULK1 signaling
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Liying Shen, Yingwei Zhu, Zhenfeng Chen, Feng Shen, Weiwei Yu, and Li Zhang
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Isoliquiritigenin ,Autophagy ,Ischemia reperfusion injury ,AMPK/mTOR/ULK1 ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background Ischemia reperfusion (IR) causes impaired myocardial function, and autophagy activation ameliorates myocardial IR injury. Isoliquiritigenin (ISO) has been found to protect myocardial tissues via AMPK, with exerting anti-tumor property through autophagy activation. This study aims to investigate ISO capacity to attenuate myocardial IR through autophagy activation mediated by AMPK/mTOR/ULK1 signaling. Methods ISO effects were explored by SD rats and H9c2 cells. IR rats and IR-induced H9c2 cell models were established by ligating left anterior descending (LAD) coronary artery and hypoxia/re-oxygenation, respectively, followed by low, medium and high dosages of ISO intervention (Rats: 10, 20, and 40 mg/kg; H9c2 cells: 1, 10, and 100 μmol/L). Myocardial tissue injury in rats was assessed by myocardial function-related index, HE staining, Masson trichrome staining, TTC staining, and ELISA. Autophagy of H9c2 cells was detected by transmission electron microscopy (TEM) and immunofluorescence. Autophagy-related and AMPK/mTOR/ULK1 pathway-related protein expressions were detected with western blot. Results ISO treatment caused myocardial function improvement, and inhibition of myocardial inflammatory infiltration, fibrosis, infarct area, oxidative stress, CK-MB, cTnI, and cTnT expression in IR rats. In IR-modeled H9c2 cells, ISO treatment lowered apoptosis rate and activated autophagy and LC3 fluorescence expression. In vivo and in vitro, ISO intervention exhibited enhanced Beclin1, LC3II/LC3I, and p-AMPK/AMPK levels, whereas inhibited P62, p-mTOR/mTOR and p-ULK1(S757)/ULK1 protein expression, activating autophagy and protecting myocardial tissues from IR injury. Conclusion ISO treatment may induce autophagy by regulating AMPK/mTOR/ULK1 signaling, thereby improving myocardial IR injury, as a potential candidate for treatment of myocardial IR injury.
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- 2024
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6. Cytokine release syndrome caused by immune checkpoint inhibitors: a case report and literature review
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Xiuping Zhang, Yang You, Pengfei Zhang, Yan Wang, and Feng Shen
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cytokine release syndrome ,gastric cancer ,immune-related adverse reaction ,immune checkpoint inhibitors ,systemic inflammatory response syndrome ,treatment ,Medicine ,Medicine (General) ,R5-920 - Abstract
Immune checkpoint inhibitors (ICIs) have gained widespread application in the treatment of malignant tumors. Cytokine release syndrome (CRS) is a systemic inflammatory response triggered by various factors, including infections and immunotherapy. We present a case of CRS occurring in a gastric cancer patient after receiving combination therapy of tislelizumab, anlotinib and combination of capecitabine and oxaliplatin. Nineteen days after the third dose of tislelizumab, the patient experienced sudden unconsciousness, frothing at the mouth, convulsions and other clinical manifestations resembling epileptiform seizures. Elevated inflammatory markers, cytokine levels and ferritin were markedly increased. Given the absence of definite clinical evidence for metastasis and infection, the diagnosis of CRS was considered. Subsequent management with glucocorticoids and intravenous immunoglobulin resulted in the patient’s improvement. However, antitumor therapy was halted, ultimately leading to death. The administration of ICIs can incite CRS, a severe, rapidly progressing condition with a poor prognosis, demanding clinical attention. Cytokines play a dual role in the pathophysiology of immune-related adverse events by mediating self-tolerance attenuation and enhancing the activation of cytotoxic T cells in the antitumor process of ICIs. The therapy of glucocorticoids combined with cytokine inhibitors may become an effective remedy.
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- 2024
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7. An Injection Molded SlipChip with Self‐Sampling for Integrated Point‐of‐Care Testing of Human Papilloma Virus
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Jiajie Zhang, Zhangli Dong, Lei Xu, Xu Han, Zheyi Sheng, Weiyu Chen, Jiayi Zheng, Dongmei Lai, and Feng Shen
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HPV screening ,lab on a Chip ,microfluidics ,point of care ,self‐sampling ,SlipChip ,Science - Abstract
Abstract High‐risk human papillomavirus (HPV) screening is crucial for cervical cancer prevention. However, laboratory‐based nucleic acid amplification tests (NAATs) require costly equipment, designated lab space, and skilled personnel. Additionally, cervical swabs collected by healthcare professionals can be inconvenient, uncomfortable, and reduce privacy, limiting broader application and patient compliance. A SlipChip‐based Integrated Point‐of‐Care (SIPOC) system featuring an injection‐molded SlipChip is presented with preloaded reagents for nucleic acid extraction and a portable four‐channel real‐time quantitative PCR instrument for detection. This system incorporates a self‐sampling method that allows participants to collect their own vaginal swabs, with the β‐Globin gene as a control. After testing 130 participants for HPV‐16 and HPV‐18, 97.7% of the self‐collected samples are valid. Among valid samples, 25 tested positive for HPV‐16 and 9 for HPV‐18. Compared to Roche's standard HPV PCR test, the SIPOC system shows 100% positive predictive value (PPV) for both HPV‐16 and HPV‐18 and negative predictive values (NPVs) of 99.0% and 99.1%, respectively. This system is promising for HPV screening in resource‐limited settings and adaptable for other point‐of‐care NAAT applications, including home testing.
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- 2024
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8. A Single‐Cell Metabolic Profiling Characterizes Human Aging via SlipChip‐SERS
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Fugang Liu, Jiaqing Liu, Yang Luo, Siyi Wu, Xu Liu, Haoran Chen, Zhewen Luo, Haitao Yuan, Feng Shen, Fangfang Zhu, and Jian Ye
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aging ,metabolic profiling ,single‐cell ,SlipChip ,surface‐enhanced Raman spectroscopy ,Science - Abstract
Abstract Metabolic dysregulation is a key driver of cellular senescence, contributing to the progression of systemic aging. The heterogeneity of senescent cells and their metabolic shifts are complex and unexplored. A microfluidic SlipChip integrated with surface‐enhanced Raman spectroscopy (SERS), termed SlipChip‐SERS, is developed for single‐cell metabolism analysis. This SlipChip‐SERS enables compartmentalization of single cells, parallel delivery of saponin and nanoparticles to release intracellular metabolites and to realize SERS detection with simple slipping operations. Analysis of different cancer cell lines using SlipChip‐SERS demonstrated its capability for sensitive and multiplexed metabolic profiling of individual cells. When applied to human primary fibroblasts of different ages, it identified 12 differential metabolites, with spermine validated as a potent inducer of cellular senescence. Prolonged exposure to spermine can induce a classic senescence phenotype, such as increased senescence‐associated β‐glactosidase activity, elevated expression of senescence‐related genes and reduced LMNB1 levels. Additionally, the senescence‐inducing capacity of spermine in HUVECs and WRL‐68 cells is confirmed, and exogenous spermine treatment increased the accumulation and release of H2O2. Overall, a novel SlipChip‐SERS system is developed for single‐cell metabolic analysis, revealing spermine as a potential inducer of senescence across multiple cell types, which may offer new strategies for addressing ageing and ageing‐related diseases.
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- 2024
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9. A new, effective method for diagnosing GLAD lesions: the chicken-wing muscle up test
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Shun Lin, Zhenye Zhong, Jie Xiao, Yun Zheng, Feng Shen, Jinshui Chen, Xiu Yang, and Xuesong Han
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Glenoid labral lesions ,GLAD lesions ,Chicken-wing muscle up test ,Shoulder ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Purpose We aimed to develop and evaluate a new diagnostic method, the 'chicken-wing muscle up test', to improve the accuracy of diagnosis of glenolabral articular disruption (GLAD) lesions compared to currently used clinical tests for injuries to the labrum. Methods Preoperative evaluations were conducted on 85 patients undergoing arthroscopic surgery at a single center between July 2021 to July 2022. The diagnostic performance of the preoperative clinical examinations (chicken-wing muscle up test, O'Brien test, crank test, and O'Driscoll test) were validated against the findings of arthroscopic examinations. Results 12 of the 85 patients in this study had arthroscopically confirmed GLAD lesions. The chicken-wing muscle up test demonstrated significantly higher sensitivity (83.33%) for GLAD lesions than the O'Brien test (33.33%), but not the crank test (50.00%) or O'Driscoll test (25.00%), and significantly higher specificity (95.89%) than the O'Brien test (75.34%), crank test (82.19%), and O'Driscoll test (71.23%). The chicken-wing muscle up test had the largest area under the receiver operating characteristic curve (AUC = 0.896, P 0.05; crank test AUC = 0.661, P > 0.05; O'Brien test AUC = 0.481, P > 0.05), indicating significantly better diagnostic efficacy for GLAD lesions than the other three tests. Conclusions The chicken-wing muscle up test is a reliable diagnostic method that improves the accuracy of diagnosis of GLAD lesions.
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- 2024
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10. Role of post‐hepatectomy portal hypertension in predicting the outcome of hepatocellular carcinoma after curative resection
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Jian Lin, Liangrui Chen, Xiaodong Shi, Fengwei Li, Qian Xu, Hongzhi Liu, Jingfeng Liu, Kui Wang, and Feng Shen
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hepatocellular carcinoma ,hepatectomy ,portal hypertension ,prognosis ,predictive factors ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Aims Portal venous pressure frequently increases after a major hepatectomy. We aimed to assess the outcomes of patients with hepatocellular carcinoma (HCC) with different post‐hepatectomy portal pressure statuses and the predictive factors correlated with prognosis and post‐hepatectomy portal hypertension (PHPH). Methods Data from consecutive patients who underwent curative‐intent hepatectomy for HCC at the Eastern Hepatobiliary Surgery Hospital and Mengchao Hepatobiliary Hospital of Fujian Medical University between January 2008 and December 2016 were retrospectively analyzed. Patients were followed up until March 1, 2022. PHPH was defined as new‐onset portal hypertension (PH) in patients without preoperative PH within 1 month of hepatectomy. Patients were classified into two groups according to the presence or absence of PHPH: non‐PH and PHPH. The clinicopathological characteristics were compared between the two groups. Univariate and multivariate analyses were used to identify independent risk factors for early and late recurrence of HCC, overall survival (OS), and PHPH. Results Disease‐free survival rates were significantly higher in the non‐PH group (n = 1068) than those in the PHPH group (n = 423) (62.0%, 39.0%, and 31.0% vs. 46.2%, 24.5%, and 19.3% at 1, 3, and 5 years, respectively; all p 40 U/L, and major hepatectomy were identified as independent risk factors for PHPH. Conclusions PHPH was associated with early recurrence of HCC and poor OS but not with late recurrence. Therefore, PHPH may be an attractive target for therapeutic interventions and follow‐up surveillance to improve prognosis.
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- 2024
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11. A fast collision detection method based on point clouds and stretched primitives for manipulator obstacle-avoidance motion planning
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Pengju Yang, Feng Shen, Dingjie Xu, and Ronghai Liu
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Electronics ,TK7800-8360 ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
It is essential to efficiently perform collision detection for robotic manipulators obstacle-avoidance planning. Existing methods are excellent when manipulator links are simple and obstacles are convex. But they cannot keep the accuracy and the efficiency at the same time when manipulator links or obstacles are nonconvex. To decrease the computing time and keep a high accuracy, this article presents a collision detection method based on point clouds and stretched primitives (PCSP). In traditional methods, obstacles are often represented either by a convex body or enormous amounts of points. But this needs a trade-off between the accuracy and the computing time when obstacles are concave. In the proposed method, we represent obstacles and complex manipulator links as stretched geometric bodies while simple manipulator links are enclosed by capsules with different sizes. The stretched body is constructed by the original point cloud from sensors but it only requires a small number of points to approximate the original object. We conducted the simulation experiment in our specific scenarios, and the results indicated that PCSP required less computing time while maintaining a high level of accuracy compared to existing methods. We also conducted standard benchmark tests in general scenarios, which showed that PCSP had advantages over libraries based on bounding volume hierarchies when concave objects are close together. Finally, we implemented PCSP for a manipulator obstacle-avoidance motion planning in a real-world environment, which demonstrated that PCSP was effective.
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- 2024
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12. The challenge and opportunity of gut microbiota‐targeted nanomedicine for colorectal cancer therapy
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Yaohua Wei, Feng Shen, Huidong Song, Ruifang Zhao, Weiyue Feng, Yue Pan, Xiaobo Li, Huanling Yu, Giuseppe Familiari, Michela Relucenti, Michael Aschner, Hanping Shi, Rui Chen, Guangjun Nie, and Hanqing Chen
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Computer applications to medicine. Medical informatics ,R858-859.7 - Published
- 2024
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13. Hepatic portal venous gas after ingesting glyphosate: A case report and literature review
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Yingxia Wu, Yijie Zhang, Jiangquan Fu, and Feng Shen
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Hepatic portal venous gas ,Case report ,Glyphosate ,Poisoning ,Radiological sign ,Etiology ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Background: Glyphosate is a widely used herbicide. Clinical presentations of glyphosate intoxication show variation, but hepatic portal venous gas(HPVG) caused by glyphosate poisoning is rarely reported. Herein, we report a rare case of ominous HPVG after ingesting glyphosate. HPVG, which used to be an ominous abdominal radiologic sign, is associated with numerous underlying abdominal pathologies, ranging from benign conditions that require no invasive treatment to potentially lethal diseases that necessitate prompt surgical intervention. Case summary: A young woman who ingested 100 mL glyphosate 6-h prior was admitted to the emergency intensive care unit. Before admission to our hospital, the patient was administered gastric lavage treatment with 10000 mL of normal saline in the local hospital. After 14 h, her laboratory examinations showed systemic inflammatory response syndrome and multiple organ dysfunction syndrome, while the condition deteriorated. Computed tomography of the abdomen showed multilinear air densities in the portal vein, hepatic branches, and mesenteric vessels, intestinal obstruction, and intestinal necrosis. Septic shock and a severe abdominal infection were diagnosed. The patient was treated conservatively as they could not tolerate surgery and, after 20 h died of septic shock. Conclusion: We reviewed 289 cases of ''hepatic portal venous gas'' in PUBMED and analyzed the etiology and treatment of HPVG accompanied by the underlying pathology. We concluded that HPVG is a radiological sign associated with various diseases, and the prognosis mainly depends on the underlying cause and clinical condition. As glyphosate may erode the digestive tract, attention should be paid to the volume, pressure, and speed of gastric lavage in treating glyphosate poisoning to avoid fatal complications such as HPVG. Abdominal symptoms need to be closely observed, and changes in the early onset of the condition in clinical practice need to be responded to promptly.
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- 2024
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14. Predictive performance of the variation rate of the driving pressure on the outcome of invasive mechanical ventilation in patients with acute respiratory distress syndrome
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Hui-Dan Jing, Jun-Ying Tian, Wei Li, Bing-Ling He, Hong-Chao Li, Fu-Xia Jian, Cui Shang, and Feng Shen
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Driving pressure ,Driving pressure variation rate ,Acute respiratory distress syndrome ,Mechanical ventilation ,Medicine (General) ,R5-920 - Abstract
Purpose: To assess the value of the driving pressure variation rate (ΔP%) in predicting the outcome of weaning from invasive mechanical ventilation in patients with acute respiratory distress syndrome. Methods: In this case-control study, a total of 35 patients with moderate-severe acute respiratory distress syndrome were admitted to the intensive care unit between January 2022 and December 2022 and received invasive mechanical ventilation for at least 48 h were enrolled. Patients were divided into successful weaning group and failed weaning group depending on whether they could be removed from ventilator support within 14 days. Outcome measures including driving pressure, PaO2:FiO2, and positive end-expiratory pressure, etc. were assessed every 24 h from day 0 to day 14 until successful weaning was achieved. The measurement data of non-normal distribution were presented as median (Q1, Q3), and the differences between groups were compared by Wilcoxon rank sum test. And categorical data use the Chi-square test or Fisher's exact test to compare. The predictive value of ΔP% in predicting the outcome of weaning from the ventilator was analyzed using receiver operating characteristic curves. Results: Of the total 35 patients included in the study, 17 were successful vs. 18 failed in weaning from a ventilator after 14 days of mechanical ventilation. The cut-off values of the median ΔP% measured by Operator 1 vs. Operator 2 in the first 4 days were ≥ 4.17% and 4.55%, respectively (p
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- 2024
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15. AIpollen: An Analytic Website for Pollen Identification Through Convolutional Neural Networks
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Xingchen Yu, Jiawen Zhao, Zhenxiu Xu, Junrong Wei, Qi Wang, Feng Shen, Xiaozeng Yang, and Zhonglong Guo
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pollen ,deep learning ,convolutional neural network ,ResNet34 ,AIpollen ,Botany ,QK1-989 - Abstract
With the rapid development of artificial intelligence, deep learning has been widely applied to complex tasks such as computer vision and natural language processing, demonstrating its outstanding performance. This study aims to exploit the high precision and efficiency of deep learning to develop a system for the identification of pollen. To this end, we constructed a dataset across 36 distinct genera. In terms of model selection, we employed a pre-trained ResNet34 network and fine-tuned its architecture to suit our specific task. For the optimization algorithm, we opted for the Adam optimizer and utilized the cross-entropy loss function. Additionally, we implemented ELU activation function, data augmentation, learning rate decay, and early stopping strategies to enhance the training efficiency and generalization capability of the model. After training for 203 epochs, our model achieved an accuracy of 97.01% on the test set and 99.89% on the training set. Further evaluation metrics, such as an F1 score of 95.9%, indicate that the model exhibits good balance and robustness across all categories. To facilitate the use of the model, we develop a user-friendly web interface. Users can upload images of pollen grains through the URL link provided in this article) and immediately receive predicted results of their genus names. Altogether, this study has successfully trained and validated a high-precision pollen grain identification model, providing a powerful tool for the identification of pollen.
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- 2024
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16. Endoscopic variceal ligation combined with sclerotherapy for management of gastroesophageal variceal bleeding in pediatric patients: a single-center retrospective study
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Ming-Ming Li, Fang Sun, Man-Xiu Huai, Chun-Ying Qu, Feng Shen, Yi Zhang, and Lei-Ming Xu
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gastroesophageal variceal bleeding ,portal hypertension ,endoscopic sclerotherapy ,endoscopic ligation ,secondary prophylaxis ,Pediatrics ,RJ1-570 - Abstract
ObjectivesPortal hypertension (PH) frequently gives rise to severe and life-threatening complications, including hemorrhage accompanied by the rupture of esophageal and gastric varices. In contrast to the guidelines for the management of PH in adults, the optimal endoscopic management of variceal bleeding for secondary prophylaxis in children remains unclear. The present study evaluated the efficacy and safety of endoscopic variceal ligation (EVL) and endoscopic sclerotherapy (EST) to control gastroesophageal variceal bleeding in children.MethodsThis retrospective study included children with gastroesophageal variceal bleeding who underwent EST or EVL at Xinhua Hospital, Shanghai Jiaotong University School of Medicine, between February 2013 and March 2020. Short-term hemostasis rate and long-term rebleeding rate were evaluated. Adverse events related to the procedures, such as esophageal ulcer, esophageal stricture, abnormal embolization, pneumonia and perforation, were also recorded.ResultsEVL (n = 8) and EST (n = 13) were performed successfully in all pediatric patients diagnosed with moderate to severe esophageal varices concurrent with gastric varices. Hemostasis was achieved during episodes of upper gastrointestinal bleeding. The mean volume of each single aliquot of cyanoacrylate injected was 0.3 ± 0.1 ml (range: 0.1–0.5 ml). Varices were eradicated in six (75%) of the eight patients who underwent EVL after a median 2 (range: 1–4) procedures and a median time of 3.40 months (range: 1.10–13.33 months). Eleven (52.4%) of the 21 patients developed rebleeding events, with the mean duration of hemostasis being 11.1 ± 11.6 months (range 1.0–39.2 months). No treatment-related complications, for example, distal embolism, occurred except for abdominal pain in one patient (4.8%).ConclusionsEST, alone or in combination with EVL, is an effective and safe method of managing gastroesophageal variceal hemorrhage in children undergoing secondary prophylaxis.
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- 2024
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17. Deletion of CD38 enhances CD19 chimeric antigen receptor T cell function
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Kimberly Veliz, Feng Shen, Olga Shestova, Maksim Shestov, Alexander Shestov, Sara Sleiman, Tyler Hansen, Roddy S. O’Connor, and Saar Gill
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CD38 enzyme ,cyclic-ADP ribose ,T cell exhaustion ,metabolic reprogramming ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Cell surface molecules transiently upregulated on activated T cells can play a counter-regulatory role by inhibiting T cell function. Deletion or blockade of such immune checkpoint receptors has been investigated to improve the function of engineered immune effector cells. CD38 is upregulated on activated T cells, and although there have been studies showing that CD38 can play an inhibitory role in T cells, how it does so has not fully been elucidated. In comparison with molecules such as PD1, CTLA4, LAG3, and TIM3, we found that CD38 displays more sustained and intense expression following acute activation. After deleting CD38 from human chimeric antigen receptor (CAR) T cells, we showed relative resistance to exhaustion in vitro and improved anti-tumor function in vivo. CD38 is a multifunctional ectoenzyme with hydrolase and cyclase activities. Reintroduction of CD38 mutants into T cells lacking CD38 provided further evidence supporting the understanding that CD38 plays a crucial role in producing the immunosuppressive metabolite adenosine and utilizing nicotinamide adenine dinucleotide (NAD) in human T cells. Taken together, these results highlight a role for CD38 as an immunometabolic checkpoint in T cells and lead us to propose CD38 deletion as an additional avenue for boosting CAR T cell function.
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- 2024
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18. Neural circuit mechanisms of acupuncture effect: where are we now?
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Xuesong Wang, Jia Wang, Rui Han, Chaochao Yu, and Feng Shen
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acupuncture ,neural circuit mechanisms ,pain ,Parkinson’s disease ,addictive disorders ,cognitive disorders ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Recently, there has been increasing attention on the impact of acupuncture on the dysregulated neural circuits in different disease. This has led to new understandings of how acupuncture works. This review presents a comprehensive analysis of research that have examined the impact of acupuncture on abnormal neural circuits associated with pain, anxiety, Parkinson’s disease, addiction disorders, cognitive problems, and gastrointestinal disorders. These studies have shown that acupuncture’s therapeutic effects are mediated by specific brain areas and neurons involved in neural circuit mechanisms, emphasising its wide-ranging influence. The positive impacts of acupuncture can be ascribed to its ability to modify the functioning of neurocircuits in various physiological conditions. Nevertheless, contemporary studies on acupuncture neural circuits frequently overlook the comprehensive circuit mechanism including the periphery, central nervous system, and target organ. Additionally, the scope of diseases studied is restricted. Future study should focus on broadening the range of diseases studied and exploring the neural circuit mechanisms of these diseases in depth in order to enhance our understanding of acupuncture’s neurobiological impacts.
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- 2024
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19. An obstacle-avoidance inverse kinematics method for robotic manipulator in overhead multi-line environment
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Pengju Yang, Feng Shen, Dingjie Xu, Bingxing Chen, Ronghai Liu, and Hongwu Wang
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Inverse kinematics ,Obstacle avoidance ,Robotic manipulator ,Nonconvex programming ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
The inverse kinematics problem plays a crucial role in robotic manipulator planning, autonomous control, and object grasping. This problem can be solved in simple environments based on existing studies. However, it is still challenging to quickly find a feasible inverse kinematic solution when obstacle avoidance is required. In this paper, we present a nonconvex composite programming method to solve the inverse kinematics problem with overhead obstacle-avoidance requirements. Our method enables efficient obstacle avoidance by directly calculating the minimum distance between the manipulator and the overhead environment. We construct end-effector error functions based on the Product of Exponentials model and explicitly provide their gradient formula. We derive the minimum distance based on the geometry parametric equation and directly utilize it to construct the obstacle avoidance function. We propose an enhanced version of adaptive moment estimation based on short-time gradient information to improve optimization performance. Finally, we conduct simulations and experiments in overhead line environments. Comparative results with other optimization methods demonstrate that our proposed method achieves a high success rate with a low solution time.
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- 2024
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20. Sex disparity in clinical characteristics and long-term prognosis after liver resection for patients with intrahepatic cholangiocarcinoma: A propensity score matching analysis
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Yiran Zou, Xinfei Xu, Tanyang Wu, Qinjunjie Chen, Zheng Li, Zhishi Yang, Kui Wang, and Feng Shen
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Intrahepatic cholangiocarcinoma ,Liver resection ,Sex ,Prognosis ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Aim: To compare the survival outcomes between male and female patients with intrahepatic cholangiocarcinoma who underwent liver resection. Methods: Data from 976 consecutive intrahepatic cholangiocarcinoma patients undergoing liver resection between January 2005 and May 2013 at the Eastern Hepatobiliary Surgery Hospital were prospectively collected and retrospectively reviewed. Patient clinicopathological characteristics, overall survival, and cumulative recurrence rates were compared between male and female patients using propensity score matching. Results: Propensity score matching generated 313 matched pairs of patients. Among the entire cohort, the 1-, 3-, and 5-year overall survival and recurrence rates of the male and female patients were 60.2 %, 37.3 %, and 27.7 % vs. 65.8 %, 40.4 %, and 31.0 % (P = 0.380) and 50.6 %, 67.4 %, and 74.2 % vs. 44.4 %, 63.5 %, and 69.6 % (P = 0.123), respectively. In the matched cohort, the 1-, 3-, and 5-year overall survival and recurrence rates of the male and female patients were 60.6 %, 35.9 % and 22.4 % vs. 66.4 %, 40.6 % and 31.1 % (P = 0.041) and 51.5 %, 69.3 % and 83.9 % vs. 44.3 %, 63.6 %, and 69.9 % (P = 0.041), respectively. After adjustment for other confounding variables by multivariate Cox regression analysis, male sex was independently associated with worse overall survival (hazard ratio = 1.322, 95 % confidence interval: 1.079–1.621, P = 0.007) and tumor recurrence (hazard ratio = 1.337, 95 % confidence interval: 1.088–1.645, P = 0.006). A subgroup analysis of patients younger than 55 years old after propensity score matching showed that male patients had significantly worse overall survival and higher recurrence rates than female patients after surgery, while no significant difference in long-term overall survival and recurrence was observed between male and female patients older than 55 years old after propensity score matching. Conclusion: Male sex was an independent risk factor for overall survival and tumor recurrence in patients after liver resection for intrahepatic cholangiocarcinoma.
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- 2024
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21. RUNX1 targeting AKT3 promotes alveolar hypercoagulation and fibrinolytic inhibition in LPS induced ARDS
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Chuan Xiao, Jiaoyangzi Liu, Yumei Cheng, Yingxia Wu, Qing Li, Xianjun Chen, Jia Yuan, Qi Dong, Lu Li, Ying liu, and Feng Shen
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AKT3 ,Runt-related transcription factor 1 ,Alveolar hypercoagulation ,Fibrinolytic inhibition ,Acute respiratory distress syndrome ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Alveolar hypercoagulation and fibrinolytic inhibition are mainly responsible for massive alveolar fibrin deposition, which are closely related with refractory hypoxemia in acute respiratory distress syndrome (ARDS). Our previous study testified runt-related transcription factor (RUNX1) participated in the regulation of this pathophysiology in this syndrome, but the mechanism is unknown. We speculate that screening the downstream genes associated with RUNX1 will presumably help uncover the mechanism of RUNX1. Methods Genes associated with RUNX1 were screened by CHIP-seq, among which the target gene was verified by Dual Luciferase experiment. Then the efficacy of the target gene on alveolar hypercoagulation and fibrinolytic inhibition in LPS-induced ARDS was explored in vivo as well as in vitro. Finally, whether the regulatory effects of RUNX1 on alveolar hypercoagulation and fibrinolytic in ARDS would be related with the screened target gene was also sufficiently explored. Results Among these screened genes, AKT3 was verified to be the direct target gene of RUNX1. Results showed that AKT3 was highly expressed either in lung tissues of LPS-induced rat ARDS or in LPS-treated alveolar epithelia cell type II (AECII). Tissue factor (TF) and plasminogen activator inhibitor 1 (PAI-1) were increasingly expressed both in lung tissues of ARDS and in LPS-induced AECII, which were all significantly attenuated by down-regulation of AKT3. Inhibition of AKT3 gene obviously ameliorated the LPS-induced lung injury as well as the collagen I expression in ARDS. RUNX1 overexpression not only promoted the expressions of TF, PAI-1, but also boosted AKT3 expression in vitro. More importantly, the efficacy of RUNX1 on TF, PAI-1 were all effectively reversed by down-regulation of AKT3 gene. Conclusion AKT3 is an important target gene of RUNX1, through which RUNX1 exerted its regulatory role on alveolar hypercoagulation and fibrinolytic inhibition in LPS-induced ARDS. RUNX1/ATK3 signaling axis is expected to be a new target for the exploration of ARDS genesis and treatment.
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- 2024
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22. Mesenchymal stem cells derived from the fibrotic tissue of atrophic nonunion or the bone marrow of iliac crest: A donor-matched comparison
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Feng Shen, Hao Xiao, and Qiang Shi
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Mesenchymal stem cells ,Atrophic nonunion ,Multi-lineage differentiation ,Senescence ,Paracrine ,Medicine (General) ,R5-920 ,Cytology ,QH573-671 - Abstract
Purpose: Atrophic nonunion is one of the most difficult complications of fracture. The cellular factors that contribute to atrophic nonunion are poorly understood, and mesenchymal stem cells (MSCs) are recognized as the key contributor to bone formation. This study aimed to characterize the MSCs isolated from the fibrotic tissue of atrophic nonunion (AN-MSCs) from the perspective of proliferation, differentiation potential, senescence, and paracrine function. Methods: Human atrophic fibrotic tissue was obtained from four donors aged 29–37 for isolating AN-MSCs, and donor-matched bone marrow acquired from the iliac crest for isolating MSCs (IC-MSCs) as control. The AN-MSCs or IC-MSCs in passage 3 were applied for the following evaluations. The surface markers expressed on the two cells were evaluated using flow cytometry. The proliferation of the two cells for up to 11 days was comparatively investigated. After osteogenic, chondrogenic, or adipogenic induction, multi-lineage differentiation of AN-MSCs or IC-MSCs was comparatively evaluated using lineage-specific stains and lineage-specific gene expression. Enzyme-linked immunosorbent assay (ELISA) assessment was applied to evaluate the paracrine function of AN-MSCs or IC-MSCs. Cellular senescence of AN-MSCs or IC-MSCs was evaluated using senescence-associated β-galactosidase (SA-β-gal) staining. Results: AN-MSCs or IC-MSCs from the four donors showed morphologic and immunophenotypic characteristics of MSCs, with the expression of MSCs markers and negative expression of hematopoietic markers. In general, AN-MSCs showed similar proliferation and adipogenic capacity with IC-MSCs. In contrast, IC-MSCs showed significantly higher osteogenic and chondrogenic capacity compared to AN-MSCs. Moreover, the culture medium of IC-MSCs contains significantly higher levels of VEGF, TGF-β1, PDGF-BB, and IGF-1 than the culture medium of AN-MSCs. Lastly, the AN-MSCs are more prone to cellular senescence than the IC-MSCs. Conclusions: In-vitro, AN-MSCs were similar to IC-MSCs in proliferation and adipogenic capacity, but inferior to IC-MSCs in osteogenic and chondrogenic capacity, paracrine function, and anti-senescence.
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- 2023
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23. DeepRTAlign: toward accurate retention time alignment for large cohort mass spectrometry data analysis
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Yi Liu, Yun Yang, Wendong Chen, Feng Shen, Linhai Xie, Yingying Zhang, Yuanjun Zhai, Fuchu He, Yunping Zhu, and Cheng Chang
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Science - Abstract
Abstract Retention time (RT) alignment is a crucial step in liquid chromatography-mass spectrometry (LC-MS)-based proteomic and metabolomic experiments, especially for large cohort studies. The most popular alignment tools are based on warping function method and direct matching method. However, existing tools can hardly handle monotonic and non-monotonic RT shifts simultaneously. Here, we develop a deep learning-based RT alignment tool, DeepRTAlign, for large cohort LC-MS data analysis. DeepRTAlign has been demonstrated to have improved performances by benchmarking it against current state-of-the-art approaches on multiple real-world and simulated proteomic and metabolomic datasets. The results also show that DeepRTAlign can improve identification sensitivity without compromising quantitative accuracy. Furthermore, using the MS features aligned by DeepRTAlign, we trained and validated a robust classifier to predict the early recurrence of hepatocellular carcinoma. DeepRTAlign provides an advanced solution to RT alignment in large cohort LC-MS studies, which is currently a major bottleneck in proteomics and metabolomics research.
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- 2023
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24. Research progress on electromagnetic spectrum multidimensional situation compressed mapping technology
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Feng SHEN, Guoru DING, Jie LI, Bo ZHOU, and Qihui WU
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electromagnetic spectrum ,cognitive radio ,spectrum sensing ,spectrum mapping ,Telecommunication ,TK5101-6720 - Abstract
In the increasingly complex electromagnetic spectrum environment, accurately obtaining comprehensive spectrum situation is a crucial prerequisite for making precise spectrum decisions.First, the spectrum mapping was introduced and compared with spectrum sensing.Then, an in-depth review of existing spectrum situation generation methods was conducted.Next, multidimensional spectrum situation compressed mapping in the face of challenges such as heterogeneity, large scale missing data, time variability and environmental complexity was proposed.It effectively compensated for the incompleteness of the spectrum mapping framework caused by ignoring the spectrum situation sensing process in traditional spectrum situation generation methods.This could further provide more accurate guidance for enhancing spectrum utilization efficiency, strengthening spectrum security maintenance, and intensifying electromagnetic warfare decision-making.Lastly, the future development trends of spectrum compressed mapping were discussed.
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- 2023
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25. Chinese Expert Consensus on the Whole-Course Management of Hepatocellular Carcinoma (2023 Edition)
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Yu Yang, Juxian Sun, Jianqiang Cai, Minshan Chen, Chaoliu Dai, Tianfu Wen, Jinglin Xia, Mingang Ying, Zhiwei Zhang, Xuewen Zhang, Chihua Fang, Feng Shen, Ping An, Qingxian Cai, Jingyu Cao, Zhen Zeng, Gang Chen, Juan Chen, Ping Chen, Yongshun Chen, Yunfeng Shan, Shuangsuo Dang, Wei-Xing Guo, Jiefeng He, Heping Hu, Bin Huang, Weidong Jia, Kexiang Jiang, Yan Jin, Yongdong Jin, Yun Jin, Gong Li, Yun Liang, Enyu Liu, Hao Liu, Wei Peng, Zhenwei Peng, Zhiyi Peng, Yeben Qian, Wanhua Ren, Jie Shi, Yusheng Song, Min Tao, Jun Tie, Xueying Wan, Bin Wang, Jin Wang, Kai Wang, Kang Wang, Xin Wang, Wenjing Wei, Fei-Xiang Wu, Bangde Xiang, Lin Xie, Jianming Xu, Mao-Lin Yan, Yufu Ye, Jinbo Yue, Xiaoxun Zhang, Yu Zhang, Aibin Zhang, Haitao Zhao, Weifeng Zhao, Xin Zheng, Hongkun Zhou, Huabang Zhou, Jun Zhou, Xinmin Zhou, Shu-Qun Cheng, and Qiu Li
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hepatocellular carcinoma ,surgery ,surveillance ,systemic chemotherapy ,treatment ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Hepatocellular carcinoma (HCC) is one of the most common malignant tumors in China. Most HCC patients have the complications of chronic liver disease and need overall consideration and whole-course management, including diagnosis, treatment, and follow-up. To develop a reasonable, long-term, and complete management plan, multiple factors need to be considered, including the patient’s general condition, basic liver diseases, tumor stage, tumor biological characteristics, treatment requirements, and economic cost. Summary: To better guide the whole-course management of HCC patients, the Chinese Association of Liver Cancer and the Chinese Medical Doctor Association has gathered multidisciplinary experts and scholars in relevant fields to formulate the “Chinese Expert Consensus on The Whole-Course Management of Hepatocellular Carcinoma (2023).” Key Messages: This expert consensus, based on the current clinical evidence and experience, proposes surgical and nonsurgical HCC management pathways and involves 18 recommendations, including perioperative treatment, systematic treatment combined with local treatment, conversion treatment, special population management, symptomatic support treatment, and follow-up management.
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- 2024
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26. Single-cell sequencing technology applied to epigenetics for the study of tumor heterogeneity
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Yuhua Hu, Feng Shen, Xi Yang, Tingting Han, Zhuowen Long, Jiale Wen, Junxing Huang, Jiangfeng Shen, and Qing Guo
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Single-cell sequencing ,Epigenome ,Multi-omics ,Tumor heterogeneity ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Background Previous studies have traditionally attributed the initiation of cancer cells to genetic mutations, considering them as the fundamental drivers of carcinogenesis. However, recent research has shed light on the crucial role of epigenomic alterations in various cell types present within the tumor microenvironment, suggesting their potential contribution to tumor formation and progression. Despite these significant findings, the progress in understanding the epigenetic mechanisms regulating tumor heterogeneity has been impeded over the past few years due to the lack of appropriate technical tools and methodologies. Results The emergence of single-cell sequencing has enhanced our understanding of the epigenetic mechanisms governing tumor heterogeneity by revealing the distinct epigenetic layers of individual cells (chromatin accessibility, DNA/RNA methylation, histone modifications, nucleosome localization) and the diverse omics (transcriptomics, genomics, multi-omics) at the single-cell level. These technologies provide us with new insights into the molecular basis of intratumoral heterogeneity and help uncover key molecular events and driving mechanisms in tumor development. Conclusion This paper provides a comprehensive review of the emerging analytical and experimental approaches of single-cell sequencing in various omics, focusing specifically on epigenomics. These approaches have the potential to capture and integrate multiple dimensions of individual cancer cells, thereby revealing tumor heterogeneity and epigenetic features. Additionally, this paper outlines the future trends of these technologies and their current technical limitations.
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- 2023
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27. Flexible-elastic deformation measurement of ZnS:Cu2+ mechanoluminescent film using visual inspection and digital image correlation
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Guo-Qing Gu, Gui-Zhong Xu, Feng Shen, Peng Zhou, Hou-Chao Sun, and Jia-Xing Weng
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zns:cu2+–pdms mechanoluminescent film ,flexible-elastic deformation performance ,visual inspection ,digital image correlation ,Technology - Abstract
ZnS-based mechanoluminescent film has been widely used in the fields of stress visualization and stress sensing, due to its high brightness and repeatable stable luminescent characteristics. To evaluate the flexibleelastic deformation performance of ZnS-based mechanoluminescent film, both visual inspection and digital image correlation (DIC) are, respectively, employed for measuring the ZnS-based mechanoluminescent film. ZnS:Cu 2+ mechanoluminescent powders are first mixed with polydimethylsiloxane (PDMS) matrix to produce ZnS:Cu 2+–PDMS mechanoluminescent film. Then, two measurement experiments are, respectively, conducted to investigate the mechanical response and the flexible-elastic deformation performance of the prepared ZnS:Cu2+–PDMS mechanoluminescent film. On one hand, the mechanical response performance of the ZnS:Cu 2+–PDMS mechanoluminescent film is validated by visual monitoring of composite concrete fracture processes. On the other hand, the prepared ZnS:Cu 2+–PDMS mechanoluminescent film is also measured by DIC to obtain its full-field deformations and strains information. The flexible-elastic deformation performance of the ZnS:Cu 2+–PDMS mechanoluminescent film is well demonstrated by the DIC measured results.
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- 2023
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28. Hydrogel Crosslinked with Nanoparticles for Prevention of Surgical Hemorrhage and Recurrence of Hepatocellular Carcinoma
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Jia‐Qi Zhu, Han Wu, Xu Li, Min‐Yu Li, Zhen‐Li Li, Xin‐Fei Xu, Li‐Hui Gu, Dong‐Xu Yin, Feng Shen, Dong‐Sheng Huang, and Tian Yang
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adhesive hydrogels ,block copolymer ,hepatocellular carcinoma ,immunotherapy ,tumor recurrence ,Science - Abstract
Abstract Hepatocellular carcinoma (HCC) is acknowledged as an immunosuppressive neoplasm, whereby the inactive microenvironment facilitates immune tolerance and evasion of HCC. Post‐surgical resected liver cancer exhibits a proclivity for relapse, rendering prevention of recurrence challenging as it may transpire at any point subsequent to surgery. Among the various anti‐recurrence interventions, the primary clinical approach involving the administration of regimens atezolizumab and bevacizumab (A+T) is deemed the most efficacious in reversing the tumor microenvironment, albeit still lacking in complete satisfaction. Therefore, the objective is to utilize a recently developed block copolymer as a protective carrier for two specific monoclonal antibody drugs. Subsequently, a modified hemostatic hydrogel will be synthesized for application during hepatic surgery. The immunotherapy impact of this approach is significantly prolonged and intensified due to the combined hemostasis properties and controlled release of the constituents within the synthesized nanocomposite hydrogel. Furthermore, these nanocomposite hydrogels exhibit remarkable efficacy in preventing postoperative wound bleeding and substantially enhancing the safety of liver cancer resection. This research on the anti‐recurrence hydrogel system presents a novel therapeutic approach for addressing local recurrence of liver cancer, potentially offering a substantial contribution to the field of surgical treatment for liver cancer in the future.
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- 2024
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29. Cell-free DNA testing for early hepatocellular carcinoma surveillanceResearch in context
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Lei Chen, Tong Wu, Rong Fan, Yun-Song Qian, Jing-Feng Liu, Jian Bai, Bo Zheng, Xiao-Long Liu, Dan Zheng, Lu-Tao Du, Guo-Qing Jiang, Ying-Chao Wang, Xiao-Tang Fan, Guo-Hong Deng, Chun-Ying Wang, Feng Shen, He-Ping Hu, Qing-Zheng Zhang, Yi-Nong Ye, Jing Zhang, Yan-Hang Gao, Jie Xia, Hua-Dong Yan, Min-Feng Liang, Yan-Long Yu, Fu-Ming Sun, Yu-Jing Gao, Jian Sun, Chun-Xiu Zhong, Yin Wang, Hui Wang, Fei Kong, Jin-Ming Chen, Hao Wen, Bo-Ming Wu, Chuan-Xin Wang, Lin Wu, Jin-Lin Hou, and Hong-Yang Wang
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Early hepatocellular carcinoma ,Surveillance ,Cell-free DNA ,Liquid biopsy ,Medicine ,Medicine (General) ,R5-920 - Abstract
Summary: Background: Liver cirrhosis (LC) is the highest risk factor for hepatocellular carcinoma (HCC) development worldwide. The efficacy of the guideline-recommended surveillance methods for patients with LC remains unpromising. Methods: A total of 4367 LCs not previously known to have HCC and 510 HCCs from 16 hospitals across 11 provinces of China were recruited in this multi-center, large-scale, cross-sectional study. Participants were divided into Stage Ⅰ cohort (510 HCCs and 2074 LCs) and Stage Ⅱ cohort (2293 LCs) according to their enrollment time and underwent Tri-phasic CT/enhanced MRI, US, AFP, and cell-free DNA (cfDNA). A screening model called PreCar Score was established based on five features of cfDNA using Stage Ⅰ cohort. Surveillance performance of PreCar Score alone or in combination with US/AFP was evaluated in Stage Ⅱ cohort. Findings: PreCar Score showed a significantly higher sensitivity for the detection of early/very early HCC (Barcelona stage A/0) in contrast to US (sensitivity of 51.32% [95% CI: 39.66%–62.84%] at 95.53% [95% CI: 94.62%–96.38%] specificity for PreCar Score; sensitivity of 23.68% [95% CI: 14.99%–35.07%] at 99.37% [95% CI: 98.91%–99.64%] specificity for US) (P
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- 2024
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30. Synthesis of MgO-doped ordered mesoporous carbons by Mg2+-tannin coordination for efficient isomerization of glucose to fructose
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Junyan Fu, Feng Shen, Xiaoning Liu, and Xinhua Qi
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Glucose ,Fructose ,Isomerization ,Porous carbon ,Biomass ,Catalysis ,Renewable energy sources ,TJ807-830 ,Ecology ,QH540-549.5 - Abstract
In-situ MgO-doped ordered mesoporous carbon (OMC@MgO) was fabricated by formaldehyde-free self-assembly method, in which biomass-derived tannin was used as carbon precursor replacing fossil-based phenolics, Mg2+ as both cross-linker and precursor of catalytic sites. Up to ∼20 wt% MgO could be doped in the carbon skeleton with good dispersion retaining well-ordered mesoporous structures, while more MgO content (35 wt%) led to the failing in the formation of ordered mesoporous structure. The OMC@MgO possessed a high specific surface area (298.8 m2 g−1), uniform pore size distribution (4.8 nm) and small crystallite size of MgO (1.73 nm) due to the confinement effect of ordered mesoporous structure. Using OMC@MgO as the heterogeneous catalyst, a maximum fructose yield of 32.4% with a selectivity up to 81.1% was achieved from glucose in water (90 °C, 60 min), which is much higher than that obtained using the MgO doped active carbon via conventional post-impregnation method (26.5% yield with 58.3% selectivity). Higher reaction temperature (>90 °C) resulted in decrease of selectivity due to the formation of humins. The designed OMC@MgO displayed tolerant to high initial glucose concentrations (10 wt%) and could remain good recyclability without significant loss of activity for three cycles.
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- 2023
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31. Alveolar–arterial oxygen gradient nonlinearly impacts the 28‐day mortality of patients with sepsis: Secondary data mining based on the MIMIC‐IV database
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Ying Wang, Yan He, Lu Chen, Ying Liu, Jia Yuan, Hongying Bi, Qimin Chen, Xianjun Chen, and Feng Shen
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D(A‐a)O2 ,MIMIC‐IV database ,mortality ,sepsis ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Objective Lung is often implicated in sepsis, resulting in acute respiratory distress syndrome (ARDS). The alveolar–arterial oxygen gradient [D(A‐a)O2] reflects lung diffusing capacity, which is usually compromised in ARDS. But whether D(A‐a)O2 impacts the prognosis of patients with sepsis remains to be explored. Our study aims to investigate the association between D(A‐a)O2 and 28‐day mortality in patients with sepsis using a large sample, multicenter Medical Information Mart for Intensive Care (MIMIC)‐IV database. Methods We extracted a data of 35 010 patients with sepsis from the retrospective cohort MIMIC‐IV database, by which the independent effects of D(A‐a)O2 on 28‐day death risk was investigated, with D(A‐a)O2 as being the exposure variable and 28‐day fatality being the outcome variable. Binary logistic regression and a two‐piecewise linear model were employed to explore the relationship between D(A‐a)O2 and the 28‐day death risk after confounding factors were optimized including demographic indicators, Charlson comorbidity index (CCI), Sequential Organ Failure Assessment (SOFA) score, drug administration, and vital signs. Results A total of 18 933 patients were finally included in our analysis. The patients' average age was 66.67 ± 16.01 years, and the mortality at 28 days was 19.23% (3640/18933). Multivariate analysis demonstrated that each 10‐mmHg rise of D(A‐a)O2 was linked with a 3% increase in the probability of death at 28 days either in the unadjusted model or in adjustment for demographic variables (Odds ratio [OR]: 1.03, 95% CI: 1.02 to 1.03). But, each 10 mmHg increase in D(A‐a)O2 was associated with a 3% increase of death (OR: 1.03, 95% CI: 1.023 to 1.033) in the case of adjustment for all covariants. Through smoothed curve fitting and generalized summation models, we found that non‐linear relationship existed between D(A‐a)O2 and the death at 28‐day, which demonstrated that D(A‐a)O2 had no any impacts on the prognosis of patients with sepsis when D(A‐a)O2 was less than or equal to 300 mmHg, but once D(A‐a)O2 exceeded 300 mmHg, however, every 10 mmHg elevation of D(A‐a)O2 is accompanied by a 5% increase of the 28‐day death (OR: 1.05; 95% CI:1.04 to 1.05, p
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- 2023
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32. Integrated Analysis of the lncRNA-miRNA-mRNA Expression Profiles in Response to Meloidogyne incognita in Radish (Raphanus sativus L.)
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Xiaobo Luo, Yueyue Jin, Feng Shen, and Wanping Zhang
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radish ,root-knot nematodes ,DElncRNA ,DGEs ,DEP ,DEmiRNA ,Agriculture - Abstract
Radish is an important root vegetable that is widely grown in Asia. The root-knot nematode (RKN) Meloidogyne incognita seriously affects the growth and development of radish root and causes poor appearance quality. However, the molecular mechanism of radish response to RKNs remains poorly understood. In this study, a total of 220 lncRNAs, 1144 mRNAs, 20 miRNAs and 153 proteins were differential expressed between the RKN-infected and WT samples. Correlation analysis of all DEPs compared with all DGEs showed that 8 mRNAs-DEPs showed a changed abundance. The results showed that 18 DEmiRNAs have 167 target DEGs in 220 miRNA-target modules and 29 DElncRNAs were predicted as putative targets of 16 DEmiRNAs in 37 miRNA-target modules. In all, 6 DGEs in the ABA pathway and 2 DGEs in the JA pathway were identified under RKN infection, respectively. The four regulatory networks of lncRNA-miRNA-mRNA were constructed in response to RKN infection. qRT-PCR analysis found that the expression pattern of 6 DElncRNAs, 6 DEmRNAs, 6 DEmiRNAs and 6 DEPs were consistent with sequencing results. These results provide a theoretical basis for studying the molecular mechanism of radish in response to M. incognita and breeding resistant varieties to this nematode.
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- 2024
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33. Revealing the Viable Microbial Community of Biofilm in a Sewage Treatment System Using Propidium Monoazide Combined with Real-Time PCR and Metagenomics
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Jiayin Liang, Xiangqun Zheng, Tianyang Ning, Jiarui Wang, Xiaocheng Wei, Lu Tan, and Feng Shen
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propidium monoazide (PMA) ,real-time quantitative polymerase chain reaction (qPCR) ,metagenomic ,biofilm viability ,viable microbial community structure ,Biology (General) ,QH301-705.5 - Abstract
Microbial community composition, function, and viability are important for biofilm-based sewage treatment technologies. Most studies of microbial communities mainly rely on the total deoxyribonucleic acid (DNA) extracted from the biofilm. However, nucleotide materials released from dead microorganisms may interfere with the analysis of viable microorganisms and their metabolic potential. In this study, we developed a protocol to assess viability as well as viable community composition and function in biofilm in a sewage treatment system using propidium monoazide (PMA) coupled with real-time quantitative polymerase chain reaction (qPCR) and metagenomic technology. The optimal removal of PMA from non-viable cells was achieved by a PMA concentration of 4 μM, incubation in darkness for 5 min, and exposure for 5 min. Simultaneously, the detection limit can reach a viable bacteria proportion of 1%, within the detection concentration range of 102–108 CFU/mL (colony forming unit/mL), showing its effectiveness in removing interference from dead cells. Under the optimal conditions, the result of PMA–metagenomic sequencing revealed that 6.72% to 8.18% of non-viable microorganisms were influenced and the composition and relative abundance of the dominant genera were changed. Overall, this study established a fast, sensitive, and highly specific biofilm viability detection method, which could provide technical support for accurately deciphering the structural composition and function of viable microbial communities in sewage treatment biofilms.
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- 2024
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34. A novel hybrid PSO-MIDAS model and its application to the U.S. GDP forecast.
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Feng Shen, Xiaodong Yan, and Yuhuang Shang
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Medicine ,Science - Abstract
In this study, the traditional lag structure selection method in the Mixed Data Sampling (MIDAS) regression model for forecasting GDP was replaced with a machine learning approach using the particle swarm optimization algorithm (PSO). The introduction of PSO aimed to automatically optimize the MIDAS model's mixed-frequency lag structures, improving forecast accuracy and resolving the "forecast accuracy" and "forecast cost" weighting problem. The Diebold-Mariano test results based on U.S. macroeconomic data show that when the forecast horizon is large, the forecast accuracy of the PSO-MIDAS model is significantly better than other benchmark models. Empirical results show that, compared to the benchmark MIDAS model, the forecast accuracy of both univariate and multivariate PSO-MIDAS models improves by an average of 10% when the forecast horizon exceeds 2 quarters, and the optimization effect is greater compared to other benchmark models. The innovative use of the PSO algorithm addresses the limitations of traditional lag structure selection methods and enhances the predictive potential of the MIDAS model.
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- 2024
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35. Adjuvant immunotherapy improves recurrence-free and overall survival following surgical resection for intermediate/advanced hepatocellular carcinoma a multicenter propensity matching analysis
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Xiao Xu, Ming-Da Wang, Jia-Hao Xu, Zhong-Qi Fan, Yong-Kang Diao, Zhong Chen, Hang-Dong Jia, Fu-Bao Liu, Yong-Yi Zeng, Xian-Ming Wang, Han Wu, Wei Qiu, Chao Li, Timothy M. Pawlik, Wan Yee Lau, Feng Shen, Guo-Yue Lv, and Tian Yang
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hepatocellular carcinoma ,BCLC staging ,recurrence ,adjuvant therapy ,immune checkpoint inhibitors ,propensity matching analysis ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Background & aimsThe effectiveness of adjuvant immunotherapy to diminish recurrence and improve long-term prognosis following curative-intent surgical resection for hepatocellular carcinoma (HCC) is of increased interest, especially among individuals at high risk of recurrence. The objective of the current study was to investigate the impact of adjuvant immunotherapy on long-term recurrence and survival after curative resection among patients with intermediate/advanced HCC.MethodsUsing a prospectively-collected multicenter database, patients who underwent curative-intent resection for Barcelona Clinic Liver Cancer (BCLC) stage B/C HCC were identified. Propensity score matching (PSM) analysis was used to compare recurrence-free survival (RFS) and overall survival (OS) between patients treated with and without adjuvant immune checkpoint inhibitors (ICIs). Multivariate Cox-regression analysis further identified independent factors of RFS and OS.ResultsAmong the 627 enrolled patients, 109 patients (23.3%) received adjuvant immunotherapy. Most ICI-related adverse reactions were grading I-II. PSM analysis created 99 matched pairs of patients with comparable baseline characteristics between patients treated with and without adjuvant immunotherapy. In the PSM cohort, the median RFS (29.6 vs. 19.3 months, P=0.031) and OS (35.1 vs. 27.8 months, P=0.036) were better among patients who received adjuvant immunotherapy versus patients who did not. After adjustment for other confounding factors on multivariable analyzes, adjuvant immunotherapy remained independently associated with favorable RFS (HR: 0.630; 95% CI: 0.435-0.914; P=0.015) and OS (HR: 0.601; 95% CI: 0.401-0.898; P=0.013). Subgroup analyzes identified potentially prognostic benefits of adjuvant immunotherapy among patients with intermediate-stage and advanced-stage HCC.ConclusionThis real-world observational study demonstrated that adjuvant immunotherapy was associated with improved RFS and OS following curative-intent resection of intermediate/advanced HCC. Future randomized controlled trials are warranted to establish definitive evidence for this specific population at high risks of recurrence.
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- 2024
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36. Effects of beta-blockers use on mortality of patients with acute respiratory distress syndrome: a retrospective cohort study
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Yukang Dong, Run Sun, Jiangquan Fu, Rui Huang, Huan Yao, Jingni Wang, Ying Wang, and Feng Shen
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beta-blockers ,acute respiratory distress syndrome ,retrospective cohort study ,mortality ,MIMIC IV databases ,Physiology ,QP1-981 - Abstract
Introduction: Acute respiratory distress syndrome (ARDS) remains a challenging disease with limited prevention and treatment options. The usage of beta-blockers may have potential benefits in different critical illnesses. This study aimed to investigate the correlation between beta-blocker therapy and mortality in patients with ARDS.Materials and methods: This retrospective cohort study utilized data from the Medical Information Mart for Intensive Care (MIMIC) IV database and focused on patients diagnosed with ARDS. The primary outcome of the study was 30-day mortality. To account for confounding factors, a multivariable analysis was performed. Propensity score matching (PSM) was carried out on a 1:1 ratio. Robust assessments were conducted using inverse probability weighting (IPTW), standardized mortality ratio weighting (SMRW), pairwise algorithms (PA), and overlap weights (OW).Results: A total of 1,104 patients with ARDS were included in the study. Univariate and multivariate Cox regression analyses found that the 30-day mortality for 489 patients (23.7%) who received beta-blockers was significantly lower than the mortality rate of 615 patients (35.9%) who did not receive beta-blockers. After adjusting for potential confounders through PSM and propensity score, as well as utilizing IPTW, SMRW, PA, and OW, the results remained robust, with the hazard ratios (HR) ranging from 0.42 to 0.58 and all p-values < 0.001. Evaluation of the E-values indicated the robustness of the results even in the presence of unmeasured confounding.Conclusion: The findings suggest a potential association between beta-blocker usage and reduced mortality in critically ill patients with ARDS. However, further validation of this observation is needed through randomized controlled trials.
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- 2024
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37. The development of a cSMART-based integrated model for hepatocellular carcinoma diagnosis
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Tong Wu, Rong Fan, Jian Bai, Zhao Yang, Yun-Song Qian, Lu-Tao Du, Chun-Ying Wang, Ying-Chao Wang, Guo-Qing Jiang, Dan Zheng, Xiao-Tang Fan, Bo Zheng, Jing-Feng Liu, Guo-Hong Deng, Feng Shen, He-Ping Hu, Yi-Nong Ye, Qing-Zheng Zhang, Jing Zhang, Yan-Hang Gao, Jie Xia, Hua-Dong Yan, Min-Feng Liang, Yan-Long Yu, Fu-Ming Sun, Yu-Jing Gao, Jian Sun, Chun-Xiu Zhong, Yin Wang, Hui Wang, Fei Kong, Jin-Ming Chen, Hao Wen, Bo-Ming Wu, Chuan-Xin Wang, Lin Wu, Jin-Lin Hou, Xiao-Long Liu, Hong-Yang Wang, and Lei Chen
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Cell-free DNA ,Hepatocellular carcinoma ,Mutation ,Biomarker ,Diagnosis ,Diseases of the blood and blood-forming organs ,RC633-647.5 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Hepatocellular carcinoma (HCC) generally arises from a background of liver cirrhosis (LC). Patients with cirrhosis and suspected HCC are recommended to undergo serum biomarker tests and imaging diagnostic evaluation. However, the performance of routine diagnostic methods in detecting early HCC remains unpromising. Methods Here, we conducted a large-scale, multicenter study of 1675 participants including 490 healthy controls, 577 LC patients, and 608 HCC patients from nine clinical centers across nine provinces of China, profiled gene mutation signatures of cell-free DNA (cfDNA) using Circulating Single-Molecule Amplification and Resequencing Technology (cSMART) through detecting 931 mutation sites across 21 genes. Results An integrated diagnostic model called “Combined method” was developed by combining three mutation sites and three serum biomarkers. Combined method outperformed AFP in the diagnosis of HCC, especially early HCC, with sensitivities of 81.25% for all stages and 66.67% for early HCC, respectively. Importantly, the integrated model exhibited high accuracy in differentiating AFP-negative, AFP-L3-negative, and PIVKA-II-negative HCCs from LCs.
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- 2023
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38. Hyperspectral Image Classification Based on 3-D Multihead Self-Attention Spectral–Spatial Feature Fusion Network
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Qigao Zhou, Shuai Zhou, Feng Shen, Juan Yin, and Dingjie Xu
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Convolutional neural network (CNN) ,hyperspectral image classification ,multihead self-attention ,multiscale convolution ,Ocean engineering ,TC1501-1800 ,Geophysics. Cosmic physics ,QC801-809 - Abstract
Convolutional neural networks are a popular method in hyperspectral image classification. However, the accuracy of the models is closely related to the number and spatial size of training samples. Which relieve the performance decline by the number and spatial size of training samples, we designed a 3-D multihead self-attention spectral–spatial feature fusion network (3DMHSA-SSFFN) that contains step-by-step feature extracted blocks (SBSFE) and 3-D multihead-self-attention-module (3DMHSA). The proposed step-by-step feature extracted blocks relieved the declining-accuracy phenomenon for the limited number of training samples. Multiscale convolution kernels extract more spatial–spectral features in the step-by-step feature-extracted blocks. In hyperspectral image classification, the 3DMHSA module enhances the stability of classification by correlating disparate features. Experimental results show that 3DMHSA-SSFFN possesses a better classification performance than other advanced models through the limited number of balance and imbalance training data in three data.
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- 2023
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39. Automated Construction Site Monitoring Based on Improved YOLOv8-seg Instance Segmentation Algorithm
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Ruihan Bai, Mingkang Wang, Zhiping Zhang, Jiahui Lu, and Feng Shen
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Instance segmentation ,YOLOv8 ,construction site ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Utilizing Unmanned Aerial Vehicles (UAV) and instance segmentation for construction site monitoring(such as construction machinery and operation surfaces) offers a significant leap in management efficiency over traditional manual supervision methods. However, in UAV-based remote sensing images, the subtle presence of construction machinery and the image features resemblances among various operational surfaces make it difficult to segment instances. To address these challenges, this study proposed a novel instance segmentation model based on the YOLOv8-seg model. Given the unique challenges, the proposed model makes three improvements to the original YOLOv8-seg model. First, the paper incorporates the FocalNext module, which extends the sense field of the convolutional kernel to capture contextual data and integrates multilevel features, enhancing the perception of local details. Second, the paper incorporates the Efficient Multiscale Attention (EMA) module, which refines image features by emphasizing spatial-channel interactions and adeptly contrasts patterns across scales to detect nuances overlooked by conventional models, aiding in distinguishing similar construction operation surfaces. Last, given the intricate nature of construction site images, this paper incorporates the Context Aggregation module, which enhances pixel analysis by intelligently modulating feature weights to highlight essential global contexts. The ablation experiment demonstrates that the enhancements perform well on the YOLOv8-seg two variants model. Comparative experimental results show that the improved model significantly outperforms existing instance segmentation models regarding model performance, complexity, and inference speed. Overall, the improved YOLOv8-seg model balances model performance and computational complexity to meet the needs of edge device deployment in field monitoring.
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- 2023
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40. HUB genes transcriptionally regulate lipid metabolism in alveolar type II cells under LPS stimulation
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Xianjun Chen, Chuan Xiao, Ying Liu, Qing Li, Yumei Cheng, Shuwen Li, Wei Li, Jia Yuan, Ying Wang, and Feng Shen
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ATII cells ,Pulmonary surfactant ,Lipid metabolism ,RNA-Seq ,Hub gene ,ARDS ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Objective: Alveolar type II (ATII) cells produce pulmonary surfactant (PS) essential for maintaining lung function. The aberration or depletion of PS can cause alveolar collapse, a hallmark of acute respiratory distress syndrome (ARDS). However, the intricacies underlying these changes remain unclear. This study aimed to elucidate the mechanisms underlying PS perturbations in ATII cells using transcriptional RNA-seq, offering insights into the pathogenesis of ARDS. Methods: ATII cells were identified using immunofluorescence targeting surface-active protein C. We used 24-h lipopolysaccharide (LPS)-induced ATII cells as an ARDS cell model. The efficacy of the injury model was gauged by detecting the presence of tumour necrosis factor-α and interleukin-6. RNA-seq analysis was performed to investigate the dynamics of PS deviation in unaltered and LPS-exposed ATII cells. Results: Whole-transcriptome sequencing revealed that LPS-stimulated ATII cells showed significantly increased transcription of genes, including Lss, Nsdhl, Hmgcs1, Mvd, Cyp51, Idi1, Acss2, Insig1, and Hsd17b7, which play key roles in regulating cholesterol biosynthesis. We further verified gene levels using real-time quantitative PCR, and the results showed that the mRNA expression of these genes increased, which was consistent with the RNA-seq results. Conclusion: Our study revealed pivotal transcriptional shifts in ATII cells after LPS exposure, particularly in nine key lipid and cholesterol metabolism genes. This altered expression might disrupt the lipid balance, ultimately affecting PS function. This finding deepens our understanding of the aetiology of ARDS and may lead to new therapeutic directions.
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- 2023
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41. Refinement and validation of a comprehensive clinical diagnostic model (GAMAD) based on gender, age, multitarget circulating tumour DNA methylation signature and commonly used serological biomarkers for early detection of hepatocellular carcinoma: a multicentre, prospective observational study protocol
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Hongmei Liu, Feng Shen, Fengmei Wang, Tian Yang, Guoyue Lv, and Nanya Wang
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Medicine - Abstract
Introduction Prompt detection of hepatocellular carcinoma (HCC) in patients with chronic liver diseases is critical for enhancing prognosis. Existing imaging techniques and serum markers fall short of clinical needs. This study aims to establish a non-invasive diagnostic model for early HCC detection in the Chinese population.Methods and analysis This prospective, multicentre, observational study will enrol 2000 participants, including HCC patients, those with chronic liver diseases (hepatitis, cirrhosis and benign liver space-occupying lesions), and healthy individuals. The study will collect demographic data and blood samples, which will be used to test α-fetoprotein (AFP), des-γ-carboxy-prothrombin (DCP) and circulating tumour DNA (ctDNA) methylation. The GAMAD (Gender+Age+Methylation+AFP+DCP) model involving gender, age, ctDNA methylation signature, AFP and DCP will be developed and blindly validated in training and validation sets (1400 and 600 cases, respectively). Primary endpoints include sensitivity, specificity and accuracy (receiver operating characteristic curves; area under the curve value) of GAMAD for HCC and/or high-risk HCC groups. Secondary endpoints involve comparing GAMAD with the established GALAD (Gender+Age+AFP-L3+AFP+DCP) model and each blood index (AFP, DCP and methylation signature) to evaluate: (1) GAMAD’s clinical utility for HCC patients in all stages according to different staging systems; (2) GAMAD’s discrimination ability for patients in various subgroups, including liver cirrhosis (LC) related HCC and LC, hepatitis B virus (HBV) related HCC and HBV, hepatitis C virus (HCV) related HCC and HCV, and non-alcoholic fatty liver disease (NAFLD) related HCC and NAFLD.Ethics and dissemination This trial has been approved by the Medical Ethics Committees of the First Hospital of Jilin University (#22K073-001), the Eastern Hepatobiliary Surgery Hospital, Naval Medical University (#EHBHKY2023-H0003-P001) and Tianjin Third Central Hospital (#IRB2023-007-01). All participants in the trial will provide written informed consent. Results of this study will be disseminated in peer-reviewed scientific journals and at conferences nationally and internationally.Trial registration number NCT05626985.
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- 2023
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42. Novel online calculator to predict reduced risk of early recurrence from adjuvant transarterial chemoembolisation for patients with hepatocellular carcinoma
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Chao Li, Feng Shen, Wan Yee Lau, Timothy M Pawlik, Tian Yang, Wei-Yue Chen, Zhi-Peng Liu, Qing-Yu Kong, Li-Yang Sun, Yong-Yi Zeng, Ying-Jian Liang, Ya-Hao Zhou, Ting-Hao Chen, Zi-Xiang Chen, Ming-Da Wang, Lan-Qing Yao, and Jian-Song Ji
- Subjects
Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background The role of adjuvant transarterial chemoembolisation (TACE) to reduce postoperative recurrence varies widely among patients undergoing hepatectomy with curative intent for hepatocellular carcinoma (HCC). Personalised predictive tool to select which patients may benefit from adjuvant TACE is lacking. This study aimed to develop and validate an online calculator for estimating the reduced risk of early recurrence from adjuvant TACE for patients with HCC.Methods From a multi-institutional database, 2590 eligible patients undergoing curative-intent hepatectomy for HCC were enrolled, and randomly assigned to the training and validation cohorts. Independent predictors of early recurrence within 1 year of surgery were identified in the training cohort, and subsequently used to construct a model and corresponding prediction calculator. The predictive performance of the model was validated using concordance indexes (C-indexes) and calibration curves, and compared with conventional HCC staging systems. The reduced risk of early recurrence when receiving adjuvant TACE was used to estimate the expected benefit from adjuvant TACE.Results The prediction model was developed by integrating eight factors that were independently associated with risk of early recurrence: alpha-fetoprotein level, maximum tumour size, tumour number, macrovascular and microvascular invasion, satellite nodules, resection margin and adjuvant TACE. The model demonstrated good calibration and discrimination in the training and validation cohorts (C-indexes: 0.799 and 0.778, respectively), and performed better among the whole cohort than four conventional HCC staging systems (C-indexes: 0.797 vs 0.562–0.673, all p
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- 2023
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43. Effects of Salinity Accumulation on Physical, Chemical, and Microbial Properties of Soil under Rural Domestic Sewage Irrigation
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Weihan Wang, Dandan Zhang, Hao Kong, Gengtao Zhang, Feng Shen, and Zhiping Huang
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rural domestic sewage ,soil salinity ,soil fertility ,bacteria ,fungi ,functional classification ,Agriculture - Abstract
Under irrigation with saline wastewater, SO42−, Cl−, and Ca2+ aggregated in the topsoil, and Mg2+ was significantly higher in the deeper soil than in the topsoil and 40 cm soil layers. The abundance of Zoopagomycota, Ascomycota, Mortierellomycota, Basidiomycota, Chytridiomycota, Rozellomycota, Blastocladiomycota, Monoblepharomycota, Mucoromycota and Olpidiomycota in the surface soil was influenced by Mg2+, whereas Ca2+ affected the abundance of Zoopagomycota and Chytridiomycota. In the 40 cm soil layer, Mg2+ and Cl− promoted Actinobacteria, Proteobacteria, Nitrospirae, Firmicutes, Entotheonellaeota, Myxococcota, Gemmatimonadota and Methylomirabilota, whereas they inhibited Planctomycetota, Acidobacteria, Chloroflexi, Patescibacteria and Bacteroidota. In the 80 cm soil layer, SO42− and Cl− promoted Rozellomycota, Mortierellomycota, Chytridiomycota, Ascomycota, and Mucoromycota, but had a negative effect on Glomeromycota, Blastocladiomycota, Olpidiomycota and Monoblepharomycota. The increase in salinity significantly reduced the abundance of the Actinomycetes phylum and the Amoebozoa phylum. Both saprophytic and symbiotic fungi decreased with increasing salinity.
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- 2024
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44. An Improved A-Star Path Planning Algorithm Based on Mobile Robots in Medical Testing Laboratories
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Chengpeng Yin, Chunyu Tan, Chongqin Wang, and Feng Shen
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A-star algorithm ,path planning ,bi-directional search ,path smoothing ,Chemical technology ,TP1-1185 - Abstract
In the blood sample management pipeline environment, we have innovatively improved the traditional A-star algorithm to enhance the efficiency of mobile robots. This study employs a grid environmental modeling approach to accurately simulate medical testing laboratories. On the grid map, we utilize an 8-neighbor search method for path planning to accommodate the complex structure within the laboratory. By introducing an improved evaluation function and a bidirectional search strategy, we have successfully reduced the number of search nodes and significantly improved path search efficiency. Additionally, we eliminate redundant nodes in the path, smooth the path using cubic uniform B-spline curves, remove unnecessary inflection points, and further optimize the motion trajectory of the robot. The experimental results of the path planning simulation under different scenarios and specifications show that the improved A-star algorithm has higher search efficiency and traverses fewer nodes compared to the traditional A-star algorithm and the bidirectional A-star algorithm. Overall, the simulation experiments verify the feasibility of the improved A-star algorithm, which can better meet the needs of actual mobile robots in real medical testing laboratories.
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- 2024
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45. Enhancing Soybean and Maize Yields through Improved Nitrogen and Soil Water Use Efficiencies: A 40-Year Study on the Impact of Farmyard Manure Amendment in Northeast China
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Yuying Liu, Minsong Bai, Feng Shen, Zhengchao Wu, Jinfeng Yang, Na Li, Houjun Liu, Jian Dai, and Xiaori Han
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manure amendment ,soybean–maize–maize rotation ,yield ,water and N use efficiencies ,soil mineral N ,Botany ,QK1-989 - Abstract
The combined application of manure and chemical fertilizers has been recognized as a critical factor driving significant changes in crop yield and nutrient use efficiency, holding the potential to optimize agricultural management to achieve high yields. In this 40-year study, we investigated the effect of manure amendment on soybean and maize yields, water and nitrogen use efficiencies (WUE and NUE), and water and mineral N storage at 0–100 cm soil depths from 2017 to 2018 to explore the optimization of fertilization management strategies for soybean and maize production in Northeast China. To elucidate the impact of chemical fertilizers and manure, twelve treatments—control (CK); single N fertilizer at a low rate (N1) and that at a high rate (N2); N1, phosphorus (P), and potassium (K) fertilizer (N1PK); manure alone at 13.5 and 27 t ha−1 (M1 and M2); and those combined with N, P, or K fertilizer (M1N1, M1N2, and M1N1PK and M2N1, M2N2, and M2N1PK)—were selected and studied. The results showed that long-term amendment with manure significantly increased crop biomass and yield in the soybean–maize–maize rotation system. Combining with manure increased the WUE, the partial factor productivity of N fertilizer (PFPN), and N physiological efficiency (PEN) in both the soybean and maize seasons; conserved soil water (mainly at 40–60 cm); and increased soil N retention (in the upper 60 cm layer), which reduced the risk of N leaching, with a better effect being observed after the application of 13.5 t ha−1 manure. These results provide insight into the potential of using fertilization management strategies that include amendment with 13.5 t ha−1 manure in combination with N, P, and K fertilizer in the maize season and only chemical fertilizer in the soybean season, as these results indicate that such strategies can achieve high yields and be used to implement agricultural sustainable development in brown soil regions in Northeast China.
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- 2024
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46. Management of hepatocellular carcinoma in China: Seeking common grounds while reserving differences
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Tian Yang, Ming-Da Wang, Xin-Fei Xu, Chao Li, Han Wu, and Feng Shen
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hepatocellular carcinoma ,china ,hepatectomy ,molecular targeted therapy ,immunotherapy ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Published
- 2023
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47. Study on Internal Fatigue Crack Initiation and Propagation Direction of Wind Turbine Gearbox Bearings
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Haibo Sun and Feng Shen
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Bearing failure ,Crack initiation ,Crack propagation direction ,Hertz contact ,Residual stress ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
The fatigue crack initiation direction of wind turbine gearbox bearings is investigated. Through theoretical research,it is believed that the direction of crack initiation depends on the direction of the maximum shear stress amplitude plane at the local initiation position. After calculation,it is found that the orthogonal shear stress amplitude of the shallow layer inside the bearing raceway is greater than the principal shear stress amplitude,and the principal shear stress amplitude at the deeper layer is greater than the orthogonal shear stress amplitude. Therefore,the crack initiation angle varies with the initiation depth. Aiming at the problem of crack propagation,the method of stress superposition in the polar coordinate of the crack tip in fracture mechanics is used to clarify the influence of Hertz contact stress,residual stress,assembly interference pressure,etc. on the direction of crack propagation. The applicability of the theory is verified by analyzing the failure cases of bearings with different thermal treatment microstructure.
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- 2022
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48. Association between base excess and 28-day mortality in sepsis patients: A secondary analysis based on the MIMIC- IV database
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Jia Yuan, Xu Liu, Ying Liu, Wei Li, Xianjun Chen, Qiming Chen, Chuan Xiao, Ying Wan, Shuwen Li, Qing Li, Lu Li, Juan He, Lu Chen, and Feng Shen
- Subjects
Base excess ,MIMIC-IV ,Retrospective study ,Sepsis ,28-Day mortality ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Objective: The relationship between base excess (BE) and 28-day death in sepsis patients remains to be elucidated. The aim of our clinical study is to explore the association of BE with 28-day mortality in patients with sepsis by using a large sample, multicenter Medical Information Mart for Intensive Care IV (MIMIC-IV) database. Methods: We extracted the data of 35,010 patients with sepsis from the MIMIC-IV database, in which we used BE as an exposure variable and the 28-day mortality as an outcome variable, respectively, so as to explore the impact of BE on the 28-day mortality of patients with sepsis after adjusting for covariates. Results: BE and the 28-day mortality of patients with sepsis appeared to have a U-shaped relationship. The calculated inflection points were −2.5 mEq/L and 1.9 mEq/L, respectively. Our data demonstrated that BE was negatively associated with 28-day mortality in the range of −41.0 mEq/L to −2.5 mEq/L (odds ratio: 0.95; 95% confidence intervals (95%CI): 0.93 to 0.96), p
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- 2023
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49. Weak-acid biochar catalyst prepared from mechanochemically-activated biomass and humic acid for production of 5-hydroxymethylfurfural
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Haixin Guo, Sohei Ogawa, Yukiya Isoda, Feng Shen, and Richard Lee Smith
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Humic acid ,Mixing ball milling ,Oxygen-containing functional group ,Weak-acid biochar ,Environmental sciences ,GE1-350 ,Agriculture - Abstract
Article highlights Carbonization (1 h, 400 °C, N2) of mix ball-milled (10 min) waste leaves and humic acid affords weak-acid biochars. As-prepared weak-acid biochars (–COOH, OH, amino groups) were activated solids with adsorptive and catalytic properties. Weak-acid biochar catalyst is reusable and promotes fructose dehydration to 5-HMF in yields of 77.5% (140 °C, 60 min).
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- 2022
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50. Andrographolide Suppresses Expressions of Coagulation and Fibrinolytic Inhibition-Related Factors in LPS-Induced Alveolar Epithelial Cell Type II via NF-κB Signal Pathway In Vitro
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Guixia Yang, Xiang Li, Qing Li, Chuan Xiao, Hong Qian, Huilin Yang, and Feng Shen
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Acute respiratory distress syndrome ,Alveolar epithelial cell type 域 ,NF-κB ,Andrographolide ,Hypercoagulation ,Fibrinolytic inhibition ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 ,Medicine - Abstract
Abstract Background Andrographolide (Andro) has been confirmed to ameliorate alveolar hypercoagulation and fibrinolysis inhibition via NF-κB pathway in acute respiratory distress syndrome (ARDS), but the specific target of Andro is unknown. Purpose Our aim is to explore the specific target of Andro through which the drug exerted its effects on alveolar hypercoagulation and fibrinolytic inhibition in LPS-induced ARDS. Methods AECII was treated with different doses of Andro for 1 h, and then stimulated with LPS for 24 h. Expressions of tissue factor (TF), plasminogen activator inhibitor (PAI)-1 and tissue factor pathway inhibitor (TFPI) were detected. Concentrations of thrombin-antithrombin complex (TAT), pro-collagen type III peptide (PIIIP), antithrombin III (ATIII) and activated protein C (APC) in cell supernatant were measured by enzyme linked immunosorbent assay (ELISA). NF-κB signaling pathways activation was simultaneously determined. AECII with p65 down-/over-expression were used as control. Results Andro effectively inhibited TF and PAI-1 and promoted TFPI expressions on AECII induced by LPS stimulation. Andro also significantly suppressed the productions of TAT and PIIIP but promoted ATIII and APC secretions from the LPS-treated cell. Furthermore, Andro application obviously inhibited NF-κB signaling pathway activation provoked by LPS, as shown by decreased level of phosphorylation (p‑)-IKKβ/IKKβ, p-p65/p65 and p65 DNA binding activity. The effects of Andro on those factors were obviously strengthened by down- but were weakened by up-regulation of p65 gene in AECII cell. Conclusions Our data demonstrates that targeting AECII is the mechanism by which Andro ameliorates alveolar hypercoagulaiton and fibrinolytic inhibition via NF-κB pathway in ARDS. Andro is worth to be clinically further studied in ARDS treatment.
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- 2022
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