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Current climate warming is accelerating mass loss from glaciers and ice sheets. In Greenland, the rates of mass changes are now dominated by changes in surface mass balance (SMB) due to increased surface melting. To improve the future sea-level rise projections, it is therefore critical to have an accurate estimate of the SMB, which depends on the representation of the processes occurring within the snowpack. The Explicit Snow (ES) scheme implemented in the land surface model Organising Carbon and Hydrology In Dynamic Ecosystems (ORCHIDEE) has not yet been adapted to ice-covered areas. Here, we present the preliminary developments we made to apply the ES model to glaciers and ice sheets. Our analysis mainly concerns the model's ability to represent ablation-related processes. At the regional scale, our results are compared to the MAR regional atmospheric model outputs and to MODIS albedo retrievals. Using different albedo parameterizations, we performed offline ES simulations forced by the MAR model over the 2000–2019 period. Our results reveal a strong sensitivity of the modelled SMB components to the albedo parameterization. Results inferred with albedo parameters obtained using a manual tuning approach present very good agreement with the MAR outputs. Conversely, with the albedo parameterization used in the standard ORCHIDEE version, runoff and sublimation were underestimated. We also tested parameters found in a previous data assimilation experiment, calibrating the ablation processes using MODIS snow albedo. While these parameters greatly improve the modelled albedo over the entire ice sheet, they degrade the other model outputs compared to those obtained with the manually tuned approach. This is likely due to the model overfitting to the calibration albedo dataset without any constraint applied to the other processes controlling the state of the snowpack. This underlines the need to perform a “multi-objective” optimization using auxiliary observations related to internal snowpack processes. Although there is still room for further improvements, the developments reported in the present study constitute an important advance in assessing the Greenland SMB with possible extension to mountain glaciers or the Antarctic ice sheet.

The gross primary production (GPP) of the terrestrial biosphere is a key source of variability in the global carbon cycle. It is modulated by hydrometeorological drivers (i.e. short-wave radiation, air temperature, vapour pressure deficit and soil moisture) and the vegetation state (i.e. canopy greenness, leaf area index) at instantaneous to interannual timescales. In this study, we set out to evaluate the ability of GPP models to capture this variability. Eleven models were considered, which rely purely on remote sensing data (RS-driven), meteorological data (meteo-driven, e.g. dynamic global vegetation models; DGVMs) or a combination of both (hybrid, e.g. light-use efficiency, LUE, models). They were evaluated using in situ observations at 61 eddy covariance sites, covering a broad range of herbaceous and forest biomes. The results illustrated how the determinant of temporal variability shifts from meteorological variables at sub-seasonal timescales to biophysical variables at seasonal and interannual timescales. RS-driven models lacked the sensitivity to the dominant drivers at short timescales (i.e. short-wave radiation and vapour pressure deficit) and failed to capture the decoupling of photosynthesis and canopy greenness (e.g. in evergreen forests). Conversely, meteo-driven models accurately captured the variability across timescales, despite the challenges in the prognostic simulation of the vegetation state. The largest errors were found in water-limited sites, where the accuracy of the soil moisture dynamics determines the quality of the GPP estimates. In arid herbaceous sites, canopy greenness and photosynthesis were more tightly coupled, resulting in improved results with RS-driven models. Hybrid models capitalized on the combination of RS observations and meteorological information. LUE models were among the most accurate models to monitor GPP across all biomes, despite their simple architecture. Overall, we conclude that the combination of meteorological drivers and remote sensing observations is required to yield an accurate reproduction of the spatio-temporal variability of GPP. To further advance the performance of DGVMs, improvements in the soil moisture dynamics and vegetation evolution are needed.

Greenland ice sheet mass loss continues to accelerate as global temperatures increase. The surface albedo of the ice sheet determines the amount of absorbed solar energy, which is a key factor in driving surface snow and ice melting. Satellite-retrieved snow albedo allows us to compare and optimise modelled albedo over the entirety of the ice sheet. We optimise the parameters of the albedo scheme in the ORCHIDEE (Organizing Carbon and Hydrology in Dynamic Ecosystems) land surface model for 3 random years taken over the 2000–2017 period and validate over the remaining years. In particular, we want to improve the albedo at the edges of the ice sheet, since they correspond to ablation areas and show the greatest variations in runoff and surface mass balance. By giving a larger weight to points at the ice sheet's edge, we improve the model–data fit by reducing the root-mean-square deviation by over 25 % for the whole ice sheet for the summer months. This improvement is consistent for all years, even those not used in the calibration step. We also show the optimisation successfully improves the model–data fit at 87.5 % of in situ sites from the PROMICE (Programme for Monitoring of the Greenland Ice Sheet) network. We conclude by showing which additional model outputs are impacted by changes to the albedo parameters, encouraging future work using multiple data streams when optimising these parameters.

Plant transpiration dominates terrestrial latent heat fluxes (LE) and plays a central role in regulating the water cycle and land surface energy budget. However, Earth system models (ESMs) currently disagree strongly on the amount of transpiration, and thus LE, leading to large uncertainties in simulating future climate. Therefore, it is crucial to correctly represent the mechanisms controlling the transpiration in models. At the leaf scale, transpiration is controlled by stomatal regulation, and at the canopy scale, through turbulence, which is a function of canopy structure and wind. The coupling of vegetation to the atmosphere can be characterized by the coefficient Ω. A value of Ω→0 implies a strong coupling of vegetation and the atmosphere, leaving a dominant role to stomatal conductance in regulating water (H2O) and carbon dioxide (CO2) fluxes, while Ω→1 implies a complete decoupling of leaves from the atmosphere, i.e., the transfer of H2O and CO2 is limited by aerodynamic transport. In this study, we investigated how well the land surface model (LSM) Organising Carbon and Hydrology In Dynamic Ecosystems (ORCHIDEE) (v7266) simulates the coupling of vegetation to the atmosphere by using empirical daily estimates of Ω derived from flux measurements from 90 FLUXNET sites. Our results show that ORCHIDEE generally captures the Ω in forest vegetation types (0.27 ± 0.12) compared with observation (0.26 ± 0.09) but underestimates Ω in grasslands (GRA) and croplands (CRO) (0.25 ± 0.15 for model, 0.33 ± 0.17 for observation). The good model performance in forests is due to compensation of biases in surface conductance (Gs) and aerodynamic conductance (Ga). Calibration of key parameters controlling the dependence of the stomatal conductance to the water vapor deficit (VPD) improves the simulated Gs and Ω estimates in grasslands and croplands (0.28 ± 0.20). To assess the underlying controls of Ω, we applied random forest (RF) models to both simulated and observation-based Ω. We found that large observed Ω are associated with periods of low wind speed, high temperature and low VPD; it is also related to sites with large leaf area index (LAI) and/or short vegetation. The RF models applied to ORCHIDEE output generally agree with this pattern. However, we found that the ORCHIDEE underestimated the sensitivity of Ω to VPD when the VPD is high, overestimated the impact of the LAI on Ω, and did not correctly simulate the temperature dependence of Ω when temperature is high. Our results highlight the importance of observational constraints on simulating the vegetation–atmosphere coupling strength, which can help to improve predictive accuracy of water fluxes in Earth system models.

The processes involved in the exchange of water, energy and carbon in terrestrial ecosystems are strongly intertwined. To accurately represent the terrestrial biosphere in land surface models (LSMs), the intrinsic coupling between these processes is required. Soil moisture and leaf area index (LAI) are two key variables at the nexus of water, energy and vegetation. Here, we evaluated two prognostic LSMs (ISBA and ORCHIDEE) and a diagnostic model (based on the LSA SAF, Satellite Application Facility for Land Surface Analysis, algorithms) in their ability to simulate the latent heat flux (LE) and gross primary production (GPP) coherently and their interactions through LAI and soil moisture. The models were validated using in situ eddy covariance observations, soil moisture measurements and remote-sensing-based LAI. It was found that the diagnostic model performed consistently well, regardless of land cover, whereas important shortcomings of the prognostic models were revealed for herbaceous and dry sites. Despite their different architecture and parametrization, ISBA and ORCHIDEE shared some key weaknesses. In both models, LE and GPP were found to be oversensitive to drought stress. Though the simulated soil water dynamics could be improved, this was not the main cause of errors in the surface fluxes. Instead, these errors were strongly correlated to errors in LAI. The simulated phenological cycle in ISBA and ORCHIDEE was delayed compared to observations and failed to capture the observed seasonal variability. The feedback mechanism between GPP and LAI (i.e. the biomass allocation scheme) was identified as a key element to improve the intricate coupling between energy, water and vegetation in LSMs.

Carbonyl sulfide (COS) is an atmospheric trace gas of interest for C cycle research because COS uptake by continental vegetation is strongly related to terrestrial gross primary productivity (GPP), the largest and most uncertain flux in atmospheric CO2 budgets. However, to use atmospheric COS as an additional tracer of GPP, an accurate quantification of COS exchange by soils is also needed. At present, the atmospheric COS budget is unbalanced globally, with total COS flux estimates from oxic and anoxic soils that vary between −409 and −89 GgS yr−1. This uncertainty hampers the use of atmospheric COS concentrations to constrain GPP estimates through atmospheric transport inversions. In this study we implemented a mechanistic soil COS model in the ORCHIDEE (Organising Carbon and Hydrology In Dynamic Ecosystems) land surface model to simulate COS fluxes in oxic and anoxic soils. Evaluation of the model against flux measurements at seven sites yields a mean root mean square deviation of 1.6 pmol m−2 s−1, instead of 2 pmol m−2 s−1 when using a previous empirical approach that links soil COS uptake to soil heterotrophic respiration. However, soil COS model evaluation is still limited by the scarcity of observation sites and long-term measurement periods, with all sites located in a latitudinal band between 39 and 62∘ N and no observations during wintertime in this study. The new model predicts that, globally and over the 2009–2016 period, oxic soils act as a net uptake of −126 GgS yr−1 and anoxic soils are a source of +96 GgS yr−1, leading to a global net soil sink of only −30 GgS yr−1, i.e. much smaller than previous estimates. The small magnitude of the soil fluxes suggests that the error in the COS budget is dominated by the much larger fluxes from plants, oceans, and industrial activities. The predicted spatial distribution of soil COS fluxes, with large emissions from oxic (up to 68.2 pmol COS m−2 s−1) and anoxic (up to 36.8 pmol COS m−2 s−1) soils in the tropics, especially in India and in the Sahel region, marginally improves the latitudinal gradient of atmospheric COS concentrations, after transport by the LMDZ (Laboratoire de Météorologie Dynamique) atmospheric transport model. The impact of different soil COS flux representations on the latitudinal gradient of the atmospheric COS concentrations is strongest in the Northern Hemisphere. We also implemented spatiotemporal variations in near-ground atmospheric COS concentrations in the modelling of biospheric COS fluxes, which helped reduce the imbalance of the atmospheric COS budget by lowering soil COS uptake by 10 % and plant COS uptake by 8 % globally (with a revised mean vegetation budget of −576 GgS yr−1 over 2009–2016). Sensitivity analyses highlighted the different parameters to which each soil COS flux model is the most responsive, selected in a parameter optimization framework. Having both vegetation and soil COS fluxes modelled within ORCHIDEE opens the way for using observed ecosystem COS fluxes and larger-scale atmospheric COS mixing ratios to improve the simulated GPP, through data assimilation techniques.

Carbonyl sulfide (COS), a trace gas showing striking similarity to CO2 in terms of biochemical diffusion pathway into leaves, has been recognized as a promising indicator of the plant gross primary production (GPP), the amount of carbon dioxide that is absorbed through photosynthesis by terrestrial ecosystems. However, large uncertainties about the other components of its atmospheric budget prevent us from directly relating the atmospheric COS measurements to GPP. The largest uncertainty comes from the closure of its atmospheric budget, with a source component missing. Here, we explore the benefit of assimilating both COS and CO2 measurements into the LMDz atmospheric transport model to obtain consistent information on GPP, plant respiration and COS budget. To this end, we develop an analytical inverse system that optimizes biospheric fluxes for the 15 plant functional types (PFTs) defined in the ORCHIDEE global land surface model. Plant uptake of COS is parameterized as a linear function of GPP and of the leaf relative uptake (LRU), which is the ratio of COS to CO2 deposition velocities in plants. A possible scenario for the period 2008–2019 leads to a global biospheric sink of 800 GgS yr−1, with higher absorption in the high latitudes and higher oceanic emissions between 400 and 600 GgS yr−1 most of which is located in the tropics. As for the CO2 budget, the inverse system increases GPP in the high latitudes by a few GtC yr−1 without modifying the respiration compared to the ORCHIDEE fluxes used as a prior. In contrast, in the tropics the system tends to weaken both respiration and GPP. The optimized components of the COS and CO2 budgets have been evaluated against independent measurements over North America, the Pacific Ocean, at three sites in Japan and at one site in France. Overall, the posterior COS concentrations are in better agreement with the COS retrievals at 250 hPa from the MIPAS satellite and with airborne measurements made over North America and the Pacific Ocean. The system seems to have rightly corrected the underestimated GPP over the high latitudes. However, the change in seasonality of GPP in the tropics disagrees with solar-induced fluorescence (SIF) data. The decline in biospheric sink in the Amazon driven by the inversion also disagrees with MIPAS COS retrievals at 250 hPa, highlighting the lack of observational constraints in this region. Moreover, the comparison with the surface measurements in Japan and France suggests misplaced sources in the prior anthropogenic inventory, emphasizing the need for an improved inventory to better partition oceanic and continental sources in Asia and Europe.

The flow of carbon through terrestrial ecosystems and the response to climate are critical but highly uncertain processes in the global carbon cycle. However, with a rapidly expanding array of in situ and satellite data, there is an opportunity to improve our mechanistic understanding of the carbon (C) cycle's response to land use and climate change. Uncertainty in temperature limitation on productivity poses a significant challenge to predicting the response of ecosystem carbon fluxes to a changing climate. Here we diagnose and quantitatively resolve environmental limitations on the growing-season onset of gross primary production (GPP) using nearly 2 decades of meteorological and C flux data (2000–2018) at a subalpine evergreen forest in Colorado, USA. We implement the CARbon DAta-MOdel fraMework (CARDAMOM) model–data fusion network to resolve the temperature sensitivity of spring GPP. To capture a GPP temperature limitation – a critical component of the integrated sensitivity of GPP to temperature – we introduced a cold-temperature scaling function in CARDAMOM to regulate photosynthetic productivity. We found that GPP was gradually inhibited at temperatures below 6.0 ∘C (±2.6 ∘C) and completely inhibited below −7.1 ∘C (±1.1 ∘C). The addition of this scaling factor improved the model's ability to replicate spring GPP at interannual and decadal timescales (r=0.88), relative to the nominal CARDAMOM configuration (r=0.47), and improved spring GPP model predictability outside of the data assimilation training period (r=0.88). While cold-temperature limitation has an important influence on spring GPP, it does not have a significant impact on integrated growing-season GPP, revealing that other environmental controls, such as precipitation, play a more important role in annual productivity. This study highlights growing-season onset temperature as a key limiting factor for spring growth in winter-dormant evergreen forests, which is critical in understanding future responses to climate change.

The first satellite-based global retrievals of terrestrial sun-induced chlorophyll fluorescence (SIF) were achieved in 2011. Since then, a number of global SIF datasets with different spectral, spatial, and temporal sampling characteristics have become available to the scientific community. These datasets have been useful to monitor the dynamics and productivity of a range of vegetated areas worldwide, but the coarse spatiotemporal sampling and low signal-to-noise ratio of the data hamper their application over small or fragmented ecosystems. The recent advent of the Copernicus Sentinel-5P TROPOMI mission and the high quality of its data products promise to alleviate this situation, as TROPOMI provides daily global measurements at a much denser spatial and temporal sampling than earlier satellite instruments. In this work, we present a global SIF dataset produced from TROPOMI measurements within the TROPOSIF project funded by the European Space Agency. The current version of the TROPOSIF dataset covers the time period between May 2018 and April 2021. Baseline SIF retrievals are derived from the 743–758 nm window. A secondary SIF dataset derived from an extended fitting window (735–758 nm window) is included. This provides an enhanced signal-to-noise ratio at the expense of a higher sensitivity to atmospheric effects. Spectral reflectance spectra at seven 3 nm windows devoid of atmospheric absorption within the 665–785 nm range are also included in the TROPOSIF dataset as an important ancillary variable to be used in combination with SIF. The methodology to derive SIF and ancillary data as well as results from an initial data quality assessment are presented in this work. The TROPOSIF dataset is available through the following digital object identifier (DOI): https://doi.org/10.5270/esa-s5p_innovation-sif-20180501_20210320-v2.1-202104 (Guanter et al., 2021).

Land surface modellers need measurable proxies to constrain the quantity of carbon dioxide (CO2) assimilated by continental plants through photosynthesis, known as gross primary production (GPP). Carbonyl sulfide (COS), which is taken up by leaves through their stomates and then hydrolysed by photosynthetic enzymes, is a candidate GPP proxy. A former study with the ORCHIDEE land surface model used a fixed ratio of COS uptake to CO2 uptake normalised to respective ambient concentrations for each vegetation type (leaf relative uptake, LRU) to compute vegetation COS fluxes from GPP. The LRU approach is known to have limited accuracy since the LRU ratio changes with variables such as photosynthetically active radiation (PAR): while CO2 uptake slows under low light, COS uptake is not light limited. However, the LRU approach has been popular for COS–GPP proxy studies because of its ease of application and apparent low contribution to uncertainty for regional-scale applications. In this study we refined the COS–GPP relationship and implemented in ORCHIDEE a mechanistic model that describes COS uptake by continental vegetation. We compared the simulated COS fluxes against measured hourly COS fluxes at two sites and studied the model behaviour and links with environmental drivers. We performed simulations at a global scale, and we estimated the global COS uptake by vegetation to be −756 Gg S yr−1, in the middle range of former studies (−490 to −1335 Gg S yr−1). Based on monthly mean fluxes simulated by the mechanistic approach in ORCHIDEE, we derived new LRU values for the different vegetation types, ranging between 0.92 and 1.72, close to recently published averages for observed values of 1.21 for C4 and 1.68 for C3 plants. We transported the COS using the monthly vegetation COS fluxes derived from both the mechanistic and the LRU approaches, and we evaluated the simulated COS concentrations at NOAA sites. Although the mechanistic approach was more appropriate when comparing to high-temporal-resolution COS flux measurements, both approaches gave similar results when transporting with monthly COS fluxes and evaluating COS concentrations at stations. In our study, uncertainties between these two approaches are of secondary importance compared to the uncertainties in the COS global budget, which are currently a limiting factor to the potential of COS concentrations to constrain GPP simulated by land surface models on the global scale.

The availability of phosphorus (P) and nitrogen (N) constrains the ability of ecosystems to use resources such as light, water and carbon. In turn, nutrients impact the distribution of productivity, ecosystem carbon turnovers and their net exchange of CO2 with the atmosphere in response to variation of environmental conditions in both space and time. In this study, we evaluated the performance of the global version of the land surface model ORCHIDEE-CNP (v1.2), which explicitly simulates N and P biogeochemistry in terrestrial ecosystems coupled with carbon, water and energy transfers. We used data from remote sensing, ground-based measurement networks and ecological databases. Components of the N and P cycle at different levels of aggregation (from local to global) are in good agreement with data-driven estimates. When integrated for the period 1850 to 2017 forced with variable climate, rising CO2 and land use change, we show that ORCHIDEE-CNP underestimates the land carbon sink in the Northern Hemisphere (NH) during recent decades despite an a priori realistic gross primary productivity (GPP) response to rising CO2. This result suggests either that processes other than CO2 fertilization, which are omitted in ORCHIDEE-CNP such as changes in biomass turnover, are predominant drivers of the northern land sink and/or that the model parameterizations produce emerging nutrient limitations on biomass growth that are too strict in northern areas. In line with the latter, we identified biases in the simulated large-scale patterns of leaf and soil stoichiometry as well as plant P use efficiency, pointing towards P limitations that are too severe towards the poles. Based on our analysis of ecosystem resource use efficiencies and nutrient cycling, we propose ways to address the model biases by giving priority to better representing processes of soil organic P mineralization and soil inorganic P transformation, followed by refining the biomass production efficiency under increasing atmospheric CO2, phenology dynamics and canopy light absorption.

Evaluating land surface models (LSMs) using available observations is important for understanding the potential and limitations of current Earth system models in simulating water- and carbon-related variables. To reveal the error sources of a LSM, five essential climate variables have been evaluated in this paper (i.e., surface soil moisture, evapotranspiration, leaf area index, surface albedo, and precipitation) via simulations with the IPSL (Institute Pierre Simon Laplace) LSM ORCHIDEE (Organizing Carbon and Hydrology in Dynamic Ecosystems) model, particularly focusing on the difference between (i) forced simulations with atmospheric forcing data (WATCH Forcing Data ERA-Interim – WFDEI) and (ii) coupled simulations with the IPSL atmospheric general circulation model. Results from statistical evaluation, using satellite- and ground-based reference data, show that ORCHIDEE is well equipped to represent spatiotemporal patterns of all variables in general. However, further analysis against various landscape and meteorological factors (e.g., plant functional type, slope, precipitation, and irrigation) suggests potential uncertainty relating to freezing and/or snowmelt, temperate plant phenology, irrigation, and contrasted responses between forced and coupled mode simulations. The biases in the simulated variables are amplified in the coupled mode via surface–atmosphere interactions, indicating a strong link between irrigation–precipitation and a relatively complex link between precipitation–evapotranspiration that reflects the hydrometeorological regime of the region (energy limited or water limited) and snow albedo feedback in mountainous and boreal regions. The different results between forced and coupled modes imply the importance of model evaluation under both modes to isolate potential sources of uncertainty in the model.

Aerosol- and cloud-induced changes in diffuse light have important impacts on the global land carbon cycle, as they alter light distribution and photosynthesis in vegetation canopies. However, this effect remains poorly represented or evaluated in current land surface models. Here, we add a light partitioning module and a new canopy light transmission module to the ORCHIDEE (Organising Carbon and Hydrology In Dynamic Ecosystems) land surface model (trunk version, v5453) and use the revised model, ORCHIDEE_DF, to estimate the fraction of diffuse light and its effect on gross primary production (GPP) in a multilayer canopy. We evaluate the new parameterizations using flux observations from 159 eddy covariance sites over the globe. Our results show that, compared with the original model, ORCHIDEE_DF improves the GPP simulation under sunny conditions and captures the observed higher photosynthesis under cloudier conditions in most plant functional types (PFTs). Our results also indicate that the larger GPP under cloudy conditions compared with sunny conditions is mainly driven by increased diffuse light in the morning and in the afternoon as well as by a decreased vapor pressure deficit (VPD) and decreased air temperature at midday. The observations show that the strongest positive effects of diffuse light on photosynthesis are found in the range from 5 to 20 ∘C and at a VPD 2 uptake. ORCHIDEE_DF underestimates the diffuse light effect at low temperature in all PFTs and overestimates this effect at high temperature and at a high VPD in grasslands and croplands. The new model has the potential to better investigate the impact of large-scale aerosol changes and long-term changes in cloudiness on the terrestrial carbon budget, both in the historical period and in the context of future air quality policies and/or climate engineering.

Recent successes in passive remote sensing of far-red solar-induced chlorophyll fluorescence (SIF) have spurred the development and integration of canopy-level fluorescence models in global terrestrial biosphere models (TBMs) for climate and carbon cycle research. The interaction of fluorescence with photochemistry at the leaf and canopy scales provides opportunities to diagnose and constrain model simulations of photosynthesis and related processes, through direct comparison to and assimilation of tower, airborne, and satellite data. TBMs describe key processes related to the absorption of sunlight, leaf-level fluorescence emission, scattering, and reabsorption throughout the canopy. Here, we analyze simulations from an ensemble of process-based TBM–SIF models (SiB3 – Simple Biosphere Model, SiB4, CLM4.5 – Community Land Model, CLM5.0, BETHY – Biosphere Energy Transfer Hydrology, ORCHIDEE – Organizing Carbon and Hydrology In Dynamic Ecosystems, and BEPS – Boreal Ecosystems Productivity Simulator) and the SCOPE (Soil Canopy Observation Photosynthesis Energy) canopy radiation and vegetation model at a subalpine evergreen needleleaf forest near Niwot Ridge, Colorado. These models are forced with local meteorology and analyzed against tower-based continuous far-red SIF and gross-primary-productivity-partitioned (GPP) eddy covariance data at diurnal and synoptic scales during the growing season (July–August 2017). Our primary objective is to summarize the site-level state of the art in TBM–SIF modeling over a relatively short time period (summer) when light, canopy structure, and pigments are similar, setting the stage for regional- to global-scale analyses. We find that these models are generally well constrained in simulating photosynthetic yield but show strongly divergent patterns in the simulation of absorbed photosynthetic active radiation (PAR), absolute GPP and fluorescence, quantum yields, and light response at the leaf and canopy scales. This study highlights the need for mechanistic modeling of nonphotochemical quenching in stressed and unstressed environments and improved the representation of light absorption (APAR), distribution of light across sunlit and shaded leaves, and radiative transfer from the leaf to the canopy scale.

Continuous atmospheric CO2 monitoring data indicate an increase in the amplitude of seasonal CO2-cycle exchange (SCANBP) in northern high latitudes. The major drivers of enhanced SCANBP remain unclear and intensely debated, with land-use change, CO2 fertilization and warming being identified as likely contributors. We integrated CO2-flux data from two atmospheric inversions (consistent with atmospheric records) and from 11 state-of-the-art land-surface models (LSMs) to evaluate the relative importance of individual contributors to trends and drivers of the SCANBP of CO2 fluxes for 1980–2015. The LSMs generally reproduce the latitudinal increase in SCANBP trends within the inversions range. Inversions and LSMs attribute SCANBP increase to boreal Asia and Europe due to enhanced vegetation productivity (in LSMs) and point to contrasting effects of CO2 fertilization (positive) and warming (negative) on SCANBP. Our results do not support land-use change as a key contributor to the increase in SCANBP. The sensitivity of simulated microbial respiration to temperature in LSMs explained biases in SCANBP trends, which suggests that SCANBP could help to constrain model turnover times.

Soil moisture is a key variable of land surface hydrology, and its correct representation in land surface models is crucial for local to global climate predictions. The errors may come from the model itself (structure and parameterization) but also from the meteorological forcing used. In order to separate the two source of errors, four atmospheric forcing datasets, GSWP3 (Global Soil Wetness Project Phase 3), PGF (Princeton Global meteorological Forcing), CRU-NCEP (Climatic Research Unit-National Center for Environmental Prediction), and WFDEI (WATCH Forcing Data methodology applied to ERA-Interim reanalysis data), were used to drive simulations in China by the land surface model ORCHIDEE-MICT(ORganizing Carbon and Hydrology in Dynamic EcosystEms: aMeliorated Interactions between Carbon and Temperature). Simulated soil moisture was compared with in situ and satellite datasets at different spatial and temporal scales in order to (1) estimate the ability of ORCHIDEE-MICT to represent soil moisture dynamics in China; (2) demonstrate the most suitable forcing dataset for further hydrological studies in Yangtze and Yellow River basins; and (3) understand the discrepancies of simulated soil moisture among simulations. Results showed that ORCHIDEE-MICT can simulate reasonable soil moisture dynamics in China, but the quality varies with forcing data. Simulated soil moisture driven by GSWP3 and WFDEI shows the best performance according to the root mean square error (RMSE) and correlation coefficient, respectively, suggesting that both GSWP3 and WFDEI are good choices for further hydrological studies in the two catchments. The mismatch between simulated and observed soil moisture is mainly explained by the bias of magnitude, suggesting that the parameterization in ORCHIDEE-MICT should be revised for further simulations in China. Underestimated soil moisture in the North China Plain demonstrates possible significant impacts of human activities like irrigation on soil moisture variation, which was not considered in our simulations. Finally, the discrepancies of meteorological variables and simulated soil moisture among the four simulations are analyzed. The result shows that the discrepancy of soil moisture is mainly explained by differences in precipitation frequency and air humidity rather than differences in precipitation amount.

The high-latitude regions of the Northern Hemisphere are a nexus for the interaction between land surface physical properties and their exchange of carbon and energy with the atmosphere. At these latitudes, two carbon pools of planetary significance – those of the permanently frozen soils (permafrost), and of the great expanse of boreal forest – are vulnerable to destabilization in the face of currently observed climatic warming, the speed and intensity of which are expected to increase with time. Improved projections of future Arctic and boreal ecosystem transformation require improved land surface models that integrate processes specific to these cold biomes. To this end, this study lays out relevant new parameterizations in the ORCHIDEE-MICT land surface model. These describe the interactions between soil carbon, soil temperature and hydrology, and their resulting feedbacks on water and CO2 fluxes, in addition to a recently developed fire module. Outputs from ORCHIDEE-MICT, when forced by two climate input datasets, are extensively evaluated against (i) temperature gradients between the atmosphere and deep soils, (ii) the hydrological components comprising the water balance of the largest high-latitude basins, and (iii) CO2 flux and carbon stock observations. The model performance is good with respect to empirical data, despite a simulated excessive plant water stress and a positive land surface temperature bias. In addition, acute model sensitivity to the choice of input forcing data suggests that the calibration of model parameters is strongly forcing-dependent. Overall, we suggest that this new model design is at the forefront of current efforts to reliably estimate future perturbations to the high-latitude terrestrial environment.

Land surface models rarely incorporate the terrestrial phosphorus cycle and its interactions with the carbon cycle, despite the extensive scientific debate about the importance of nitrogen and phosphorus supply for future land carbon uptake. We describe a representation of the terrestrial phosphorus cycle for the ORCHIDEE land surface model, and evaluate it with data from nutrient manipulation experiments along a soil formation chronosequence in Hawaii. ORCHIDEE accounts for the influence of the nutritional state of vegetation on tissue nutrient concentrations, photosynthesis, plant growth, biomass allocation, biochemical (phosphatase-mediated) mineralization, and biological nitrogen fixation. Changes in the nutrient content (quality) of litter affect the carbon use efficiency of decomposition and in return the nutrient availability to vegetation. The model explicitly accounts for root zone depletion of phosphorus as a function of root phosphorus uptake and phosphorus transport from the soil to the root surface. The model captures the observed differences in the foliage stoichiometry of vegetation between an early (300-year) and a late (4.1 Myr) stage of soil development. The contrasting sensitivities of net primary productivity to the addition of either nitrogen, phosphorus, or both among sites are in general reproduced by the model. As observed, the model simulates a preferential stimulation of leaf level productivity when nitrogen stress is alleviated, while leaf level productivity and leaf area index are stimulated equally when phosphorus stress is alleviated. The nutrient use efficiencies in the model are lower than observed primarily due to biases in the nutrient content and turnover of woody biomass. We conclude that ORCHIDEE is able to reproduce the shift from nitrogen to phosphorus limited net primary productivity along the soil development chronosequence, as well as the contrasting responses of net primary productivity to nutrient addition.

Abstract Terrestrial ecosystems play a vital role in regulating the accumulation of carbon (C) in the atmosphere. Understanding the factors controlling land C uptake is critical for reducing uncertainties in projections of future climate. The relative importance of changing climate, rising atmospheric CO2, and other factors, however, remains unclear despite decades of research. Here, we use an ensemble of land models to show that models disagree on the primary driver of cumulative C uptake for 85% of vegetated land area. Disagreement is largest in model sensitivity to rising atmospheric CO2 which shows almost twice the variability in cumulative land uptake since 1901 (1 s.d. of 212.8 PgC vs. 138.5 PgC, respectively). We find that variability in CO2 and temperature sensitivity is attributable, in part, to their compensatory effects on C uptake, whereby comparable estimates of C uptake can arise by invoking different sensitivities to key environmental conditions. Conversely, divergent estimates of C uptake can occur despite being based on the same environmental sensitivities. Together, these findings imply an important limitation to the predictability of C cycling and climate under unprecedented environmental conditions. We suggest that the carbon modeling community prioritize a probabilistic multi-model approach to generate more robust C cycle projections.

Large uncertainties in land surface models (LSMs) simulations still arise from inaccurate forcing, poor description of land surface heterogeneity (soil and vegetation properties), incorrect model parameter values and incomplete representation of biogeochemical processes. The recent increase in the number and type of carbon cycle-related observations, including both in situ and remote sensing measurements, has opened a new road to optimize model parameters via robust statistical model–data integration techniques, in order to reduce the uncertainties of simulated carbon fluxes and stocks. In this study we present a carbon cycle data assimilation system that assimilates three major data streams, namely the Moderate Resolution Imaging Spectroradiometer (MODIS)-Normalized Difference Vegetation Index (NDVI) observations of vegetation activity, net ecosystem exchange (NEE) and latent heat (LE) flux measurements at more than 70 sites (FLUXNET), as well as atmospheric CO2 concentrations at 53 surface stations, in order to optimize the main parameters (around 180 parameters in total) of the Organizing Carbon and Hydrology in Dynamics Ecosystems (ORCHIDEE) LSM (version 1.9.5 used for the Coupled Model Intercomparison Project Phase 5 (CMIP5) simulations). The system relies on a stepwise approach that assimilates each data stream in turn, propagating the information gained on the parameters from one step to the next. Overall, the ORCHIDEE model is able to achieve a consistent fit to all three data streams, which suggests that current LSMs have reached the level of development to assimilate these observations. The assimilation of MODIS-NDVI (step 1) reduced the growing season length in ORCHIDEE for temperate and boreal ecosystems, thus decreasing the global mean annual gross primary production (GPP). Using FLUXNET data (step 2) led to large improvements in the seasonal cycle of the NEE and LE fluxes for all ecosystems (i.e., increased amplitude for temperate ecosystems). The assimilation of atmospheric CO2, using the general circulation model (GCM) of the Laboratoire de Météorologie Dynamique (LMDz; step 3), provides an overall constraint (i.e., constraint on large-scale net CO2 fluxes), resulting in an improvement of the fit to the observed atmospheric CO2 growth rate. Thus, the optimized model predicts a land C (carbon) sink of around 2.2 PgC yr−1 (for the 2000–2009 period), which is more compatible with current estimates from the Global Carbon Project (GCP) than the prior value. The consistency of the stepwise approach is evaluated with back-compatibility checks. The final optimized model (after step 3) does not significantly degrade the fit to MODIS-NDVI and FLUXNET data that were assimilated in the first two steps, suggesting that a stepwise approach can be used instead of the more “challenging” implementation of a simultaneous optimization in which all data streams are assimilated together. Most parameters, including the scalar of the initial soil carbon pool size, changed during the optimization with a large error reduction. This work opens new perspectives for better predictions of the land carbon budgets.

Assigning proper prior uncertainties for inverse modelling of CO2 is of high importance, both to regularise the otherwise ill-constrained inverse problem and to quantitatively characterise the magnitude and structure of the error between prior and "true" flux. We use surface fluxes derived from three biosphere models – VPRM, ORCHIDEE, and 5PM – and compare them against daily averaged fluxes from 53 eddy covariance sites across Europe for the year 2007 and against repeated aircraft flux measurements encompassing spatial transects. In addition we create synthetic observations using modelled fluxes instead of the observed ones to explore the potential to infer prior uncertainties from model–model residuals. To ensure the realism of the synthetic data analysis, a random measurement noise was added to the modelled tower fluxes which were used as reference. The temporal autocorrelation time for tower model–data residuals was found to be around 30 days for both VPRM and ORCHIDEE but significantly different for the 5PM model with 70 days. This difference is caused by a few sites with large biases between the data and the 5PM model. The spatial correlation of the model–data residuals for all models was found to be very short, up to few tens of kilometres but with uncertainties up to 100 % of this estimation. Propagating this error structure to annual continental scale yields an uncertainty of 0.06 Gt C and strongly underestimates uncertainties typically used from atmospheric inversion systems, revealing another potential source of errors. Long spatial e-folding correlation lengths up to several hundreds of kilometres were determined when synthetic data were used. Results from repeated aircraft transects in south-western France are consistent with those obtained from the tower sites in terms of spatial autocorrelation (35 km on average) while temporal autocorrelation is markedly lower (13 days). Our findings suggest that the different prior models have a common temporal error structure. Separating the analysis of the statistics for the model data residuals by seasons did not result in any significant differences of the spatial e-folding correlation lengths.

Correct representation of seasonal leaf dynamics is crucial for terrestrial biosphere models (TBMs), but many such models cannot accurately reproduce observations of leaf onset and senescence. Here we optimised the phenology-related parameters of the ORCHIDEE TBM using satellite-derived Normalized Difference Vegetation Index data (MODIS NDVI v5) that are linearly related to the model fAPAR. We found the misfit between the observations and the model decreased after optimisation for all boreal and temperate deciduous plant functional types, primarily due to an earlier onset of leaf senescence. The model bias was only partially reduced for tropical deciduous trees and no improvement was seen for natural C4 grasses. Spatial validation demonstrated the generality of the posterior parameters for use in global simulations, with an increase in global median correlation of 0.56 to 0.67. The simulated global mean annual gross primary productivity (GPP) decreased by ~ 10 PgC yr−1 over the 1990–2010 period due to the substantially shortened growing season length (GSL – by up to 30 days in the Northern Hemisphere), thus reducing the positive bias and improving the seasonal dynamics of ORCHIDEE compared to independent data-based estimates. Finally, the optimisations led to changes in the strength and location of the trends in the simulated vegetation productivity as represented by the GSL and mean annual fraction of absorbed photosynthetically active radiation (fAPAR), suggesting care should be taken when using un-calibrated models in attribution studies. We suggest that the framework presented here can be applied for improving the phenology of all global TBMs.

Since 70 % of global forests are managed and forests impact the global carbon cycle and the energy exchange with the overlying atmosphere, forest management has the potential to mitigate climate change. Yet, none of the land-surface models used in Earth system models, and therefore none of today's predictions of future climate, accounts for the interactions between climate and forest management. We addressed this gap in modelling capability by developing and parametrising a version of the ORCHIDEE land-surface model to simulate the biogeochemical and biophysical effects of forest management. The most significant changes between the new branch called ORCHIDEE-CAN (SVN r2290) and the trunk version of ORCHIDEE (SVN r2243) are the allometric-based allocation of carbon to leaf, root, wood, fruit and reserve pools; the transmittance, absorbance and reflectance of radiation within the canopy; and the vertical discretisation of the energy budget calculations. In addition, conceptual changes were introduced towards a better process representation for the interaction of radiation with snow, the hydraulic architecture of plants, the representation of forest management and a numerical solution for the photosynthesis formalism of Farquhar, von Caemmerer and Berry. For consistency reasons, these changes were extensively linked throughout the code. Parametrisation was revisited after introducing 12 new parameter sets that represent specific tree species or genera rather than a group of often distantly related or even unrelated species, as is the case in widely used plant functional types. Performance of the new model was compared against the trunk and validated against independent spatially explicit data for basal area, tree height, canopy structure, gross primary production (GPP), albedo and evapotranspiration over Europe. For all tested variables, ORCHIDEE-CAN outperformed the trunk regarding its ability to reproduce large-scale spatial patterns as well as their inter-annual variability over Europe. Depending on the data stream, ORCHIDEE-CAN had a 67 to 92 % chance to reproduce the spatial and temporal variability of the validation data.

This study uses a variational data assimilation framework to simultaneously constrain a global ecosystem model with eddy covariance measurements of daily net ecosystem exchange (NEE) and latent heat (LE) fluxes from a large number of sites grouped in seven plant functional types (PFTs). It is an attempt to bridge the gap between the numerous site-specific parameter optimization works found in the literature and the generic parameterization used by most land surface models within each PFT. The present multisite approach allows deriving PFT-generic sets of optimized parameters enhancing the agreement between measured and simulated fluxes at most of the sites considered, with performances often comparable to those of the corresponding site-specific optimizations. Besides reducing the PFT-averaged model–data root-mean-square difference (RMSD) and the associated daily output uncertainty, the optimization improves the simulated CO2 balance at tropical and temperate forests sites. The major site-level NEE adjustments at the seasonal scale are reduced amplitude in C3 grasslands and boreal forests, increased seasonality in temperate evergreen forests, and better model–data phasing in temperate deciduous broadleaf forests. Conversely, the poorer performances in tropical evergreen broadleaf forests points to deficiencies regarding the modelling of phenology and soil water stress for this PFT. An evaluation with data-oriented estimates of photosynthesis (GPP – gross primary productivity) and ecosystem respiration (Reco) rates indicates distinctively improved simulations of both gross fluxes. The multisite parameter sets are then tested against CO2 concentrations measured at 53 locations around the globe, showing significant adjustments of the modelled seasonality of atmospheric CO2 concentration, whose relevance seems PFT-dependent, along with an improved interannual variability. Lastly, a global-scale evaluation with remote sensing NDVI (normalized difference vegetation index) measurements indicates an improvement of the simulated seasonal variations of the foliar cover for all considered PFTs.

Fire is an important global ecological process that influences the distribution of biomes, with consequences for carbon, water, and energy budgets. Therefore it is impossible to appropriately model the history and future of the terrestrial ecosystems and the climate system without including fire. This study incorporates the process-based prognostic fire module SPITFIRE into the global vegetation model ORCHIDEE, which was then used to simulate burned area over the 20th century. Special attention was paid to the evaluation of other fire regime indicators such as seasonality, fire size and fire length, next to burned area. For 2001–2006, the simulated global spatial extent of fire agrees well with that given by satellite-derived burned area data sets (L3JRC, GLOBCARBON, GFED3.1), and 76–92% of the global burned area is simulated as collocated between the model and observation, depending on which data set is used for comparison. The simulated global mean annual burned area is 346 Mha yr−1, which falls within the range of 287–384 Mha yr−1 as given by the three observation data sets; and is close to the 344 Mha yr−1 by the GFED3.1 data when crop fires are excluded. The simulated long-term trend and variation of burned area agree best with the observation data in regions where fire is mainly driven by climate variation, such as boreal Russia (1930–2009), along with Canada and US Alaska (1950–2009). At the global scale, the simulated decadal fire variation over the 20th century is only in moderate agreement with the historical reconstruction, possibly because of the uncertainties of past estimates, and because land-use change fires and fire suppression are not explicitly included in the model. Over the globe, the size of large fires (the 95th quantile fire size) is underestimated by the model for the regions of high fire frequency, compared with fire patch data as reconstructed from MODIS 500 m burned area data. Two case studies of fire size distribution in Canada and US Alaska, and southern Africa indicate that both number and size of large fires are underestimated, which could be related with short fire patch length and low daily fire size. Future efforts should be directed towards building consistent spatial observation data sets for key parameters of the model in order to constrain the model error at each key step of the fire modelling.

Accurate assessment of anthropogenic carbon dioxide (CO2) emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to better understand the global carbon cycle, support the development of climate policies, and project future climate change. Here we describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on the combination of a range of data, algorithms, statistics and model estimates and their interpretation by a broad scientific community. We discuss changes compared to previous estimates, consistency within and among components, alongside methodology and data limitations. CO2 emissions from fossil-fuel combustion and cement production (EFF) are based on energy statistics, while emissions from land-use change (ELUC), mainly deforestation, are based on combined evidence from land-cover change data, fire activity associated with deforestation, and models. The global atmospheric CO2 concentration is measured directly and its rate of growth (GATM) is computed from the annual changes in concentration. The mean ocean CO2 sink (SOCEAN) is based on observations from the 1990s, while the annual anomalies and trends are estimated with ocean models. The variability in SOCEAN is evaluated for the first time in this budget with data products based on surveys of ocean CO2 measurements. The global residual terrestrial CO2 sink (SLAND) is estimated by the difference of the other terms of the global carbon budget and compared to results of independent dynamic global vegetation models forced by observed climate, CO2 and land cover change (some including nitrogen–carbon interactions). All uncertainties are reported as ±1σ, reflecting the current capacity to characterise the annual estimates of each component of the global carbon budget. For the last decade available (2003–2012), EFF was 8.6 ± 0.4 GtC yr−1, ELUC 0.9 ± 0.5 GtC yr−1, GATM 4.3 ± 0.1 GtC yr−1, SOCEAN 2.5 ± 0.5 GtC yr−1, and SLAND 2.8 ± 0.8 GtC yr−1. For year 2012 alone, EFF grew to 9.7 ± 0.5 GtC yr−1, 2.2% above 2011, reflecting a continued growing trend in these emissions, GATM was 5.1 ± 0.2 GtC yr−1, SOCEAN was 2.9 ± 0.5 GtC yr−1, and assuming an ELUC of 1.0 ± 0.5 GtC yr−1 (based on the 2001–2010 average), SLAND was 2.7 ± 0.9 GtC yr−1. GATM was high in 2012 compared to the 2003–2012 average, almost entirely reflecting the high EFF. The global atmospheric CO2 concentration reached 392.52 ± 0.10 ppm averaged over 2012. We estimate that EFF will increase by 2.1% (1.1–3.1%) to 9.9 ± 0.5 GtC in 2013, 61% above emissions in 1990, based on projections of world gross domestic product and recent changes in the carbon intensity of the economy. With this projection, cumulative emissions of CO2 will reach about 535 ± 55 GtC for 1870–2013, about 70% from EFF (390 ± 20 GtC) and 30% from ELUC (145 ± 50 GtC). This paper also documents any changes in the methods and data sets used in this new carbon budget from previous budgets (Le Quéré et al., 2013). All observations presented here can be downloaded from the Carbon Dioxide Information Analysis Center (doi:10.3334/CDIAC/GCP_2013_V2.3).

Two new remotely sensed leaf area index (LAI) and surface soil moisture (SSM) satellite-derived products are compared with two sets of simulations of the ORganizing Carbon and Hydrology In Dynamic EcosystEms (ORCHIDEE) and Interactions between Soil, Biosphere and Atmosphere, CO2-reactive (ISBA-A-gs) land surface models. We analyse the interannual variability over the period 1991–2008. The leaf onset and the length of the vegetation growing period (LGP) are derived from both the satellite-derived LAI and modelled LAI. The LGP values produced by the photosynthesis-driven phenology model of ISBA-A-gs are closer to the satellite-derived LAI and LGP than those produced by ORCHIDEE. In the latter, the phenology is based on a growing degree day model for leaf onset, and on both climatic conditions and leaf life span for senescence. Further, the interannual variability of LAI is better captured by ISBA-A-gs than by ORCHIDEE. In order to investigate how recent droughts affected vegetation over the Euro-Mediterranean area, a case study addressing the summer 2003 drought is presented. It shows a relatively good agreement of the modelled LAI anomalies with the observations, but the two models underestimate plant regrowth in the autumn. A better representation of the root-zone soil moisture profile could improve the simulations of both models. The satellite-derived SSM is compared with SSM simulations of ISBA-A-gs only, as ORCHIDEE has no explicit representation of SSM. Overall, the ISBA-A-gs simulations of SSM agree well with the satellite-derived SSM and are used to detect regions where the satellite-derived product could be improved. Finally, a correspondence is found between the interannual variability of detrended SSM and LAI. The predictability of LAI is less pronounced using remote sensing observations than using simulated variables. However, consistent results are found in July for the croplands of the Ukraine and southern Russia.

This paper reports a comparison between large-scale simulations of three different land surface models (LSMs), ORCHIDEE, ISBA-A-gs and CTESSEL, forced with the same meteorological data, and compared with the carbon fluxes measured at 32 eddy covariance (EC) flux tower sites in Europe. The results show that the three simulations have the best performance for forest sites and the poorest performance for cropland and grassland sites. In addition, the three simulations have difficulties capturing the seasonality of Mediterranean and sub-tropical biomes, characterized by dry summers. This reduced simulation performance is also reflected in deficiencies in diagnosed light-use efficiency (LUE) and vapour pressure deficit (VPD) dependencies compared to observations. Shortcomings in the forcing data may also play a role. These results indicate that more research is needed on the LUE and VPD functions for Mediterranean and sub-tropical biomes. Finally, this study highlights the importance of correctly representing phenology (i.e. leaf area evolution) and management (i.e. rotation–irrigation for cropland, and grazing–harvesting for grassland) to simulate the carbon dynamics of European ecosystems and the importance of ecosystem-level observations in model development and validation.

This paper describes a new model for the calculation of daily, high-resolution (up to 1 km) fire emissions, developed in the framework of the APIFLAME (Analysis and Prediction of the Impact of Fires on Air quality ModEling) project. The methodology relies on the classical approach, multiplying the burned area by the fuel load consumed and the emission factors specific to the vegetation burned. Emissions can be calculated on any user-specified domain, horizontal grid, and list of trace gases and aerosols, providing input information on the burned area (location, extent), and emission factors of the targeted species are available. The applicability to high spatial resolutions and the flexibility to different input data (including vegetation classifications) and domains are the main strength of the proposed algorithm. The modification of the default values and databases proposed does not require any change in the core of the model. The code may be used for the calculation of global or regional inventories. However, it has been developed and tested more specifically for Europe and the Mediterranean area. A regional analysis of fire activity and the resulting emissions in this region is provided. The burning season extends from June to October in most regions, with generally small but frequent fires in eastern Europe, western Russia, Ukraine and Turkey, and large events in the Mediterranean area. The resulting emissions represent a significant fraction of the total yearly emissions (on average amounting to ~ 30% of anthropogenic emissions for PM2.5, ~ 20% for CO). The uncertainty regarding the daily carbon emissions is estimated at ~ 100% based on an ensemble analysis. Considering the large uncertainties regarding emission factors, the potential error on the emissions for the various pollutants is even larger. Comparisons with other widely used emission inventories show good correlations but discrepancies of a factor of 2–4 in the amplitude of the emissions, our results being generally on the higher end.

High-latitude ecosystems play an important role in the global carbon cycle and in regulating the climate system and are presently undergoing rapid environmental change. Accurate land cover data sets are required to both document these changes as well as to provide land-surface information for benchmarking and initializing Earth system models. Earth system models also require specific land cover classification systems based on plant functional types (PFTs), rather than species or ecosystems, and so post-processing of existing land cover data is often required. This study compares over Siberia, multiple land cover data sets against one another and with auxiliary data to identify key uncertainties that contribute to variability in PFT classifications that would introduce errors in Earth system modeling. Land cover classification systems from GLC 2000, GlobCover 2005 and 2009, and MODIS collections 5 and 5.1 are first aggregated to a common legend, and then compared to high-resolution land cover classification systems, vegetation continuous fields (MODIS VCFs) and satellite-derived tree heights (to discriminate against sparse, shrub, and forest vegetation). The GlobCover data set, with a lower threshold for tree cover and taller tree heights and a better spatial resolution, tends to have better distributions of tree cover compared to high-resolution data. It has therefore been chosen to build new PFT maps for the ORCHIDEE land surface model at 1 km scale. Compared to the original PFT data set, the new PFT maps based on GlobCover 2005 and an updated cross-walking approach mainly differ in the characterization of forests and degree of tree cover. The partition of grasslands and bare soils now appears more realistic compared with ground truth data. This new vegetation map provides a framework for further development of new PFTs in the ORCHIDEE model like shrubs, lichens and mosses, to represent the water and carbon cycles in northern latitudes better. Updated land cover data sets are critical for improving and maintaining the relevance of Earth system models for assessing climate and human impacts on biogeochemistry and biophysics. The new PFT map at 5 km scale is available for download from the PANGAEA website at 10.1594/PANGAEA.810709.

Land evapotranspiration (ET) estimates are available from several global data sets. Here, monthly global land ET synthesis products, merged from these individual data sets over the time periods 1989–1995 (7 yr) and 1989–2005 (17 yr), are presented. The merged synthesis products over the shorter period are based on a total of 40 distinct data sets while those over the longer period are based on a total of 14 data sets. In the individual data sets, ET is derived from satellite and/or in situ observations (diagnostic data sets) or calculated via land-surface models (LSMs) driven with observations-based forcing or output from atmospheric reanalyses. Statistics for four merged synthesis products are provided, one including all data sets and three including only data sets from one category each (diagnostic, LSMs, and reanalyses). The multi-annual variations of ET in the merged synthesis products display realistic responses. They are also consistent with previous findings of a global increase in ET between 1989 and 1997 (0.13 mm yr−2 in our merged product) followed by a significant decrease in this trend (−0.18 mm yr−2), although these trends are relatively small compared to the uncertainty of absolute ET values. The global mean ET from the merged synthesis products (based on all data sets) is 493 mm yr−1 (1.35 mm d−1) for both the 1989–1995 and 1989–2005 products, which is relatively low compared to previously published estimates. We estimate global runoff (precipitation minus ET) to 263 mm yr−1 (34 406 km3 yr−1) for a total land area of 130 922 000 km2. Precipitation, being an important driving factor and input to most simulated ET data sets, presents uncertainties between single data sets as large as those in the ET estimates. In order to reduce uncertainties in current ET products, improving the accuracy of the input variables, especially precipitation, as well as the parameterizations of ET, are crucial.

In mid and high latitudes, the stable isotope ratio in precipitation is driven by changes in temperature, which control atmospheric distillation. This relationship forms the basis for many continental paleoclimatic reconstructions using direct (e.g. ice cores) or indirect (e.g. tree ring cellulose, speleothem calcite) archives of past precipitation. However, the archiving process is inherently biased by intermittency of precipitation. Here, we use two sets of atmospheric reanalyses (NCEP (National Centers for Environmental Prediction) and ERA-interim) to quantify this precipitation intermittency bias, by comparing seasonal (winter and summer) temperatures estimated with and without precipitation weighting. We show that this bias reaches up to 10 °C and has large interannual variability. We then assess the impact of precipitation intermittency on the strength and stability of temporal correlations between seasonal temperatures and the North Atlantic Oscillation (NAO). Precipitation weighting reduces the correlation between winter NAO and temperature in some areas (e.g. Québec, South-East USA, East Greenland, East Siberia, Mediterranean sector) but does not alter the main patterns of correlation. The correlations between NAO, δ18O in precipitation, temperature and precipitation weighted temperature are investigated using outputs of an atmospheric general circulation model enabled with stable isotopes and nudged using reanalyses (LMDZiso (Laboratoire de Météorologie Dynamique Zoom)). In winter, LMDZiso shows similar correlation values between the NAO and both the precipitation weighted temperature and δ18O in precipitation, thus suggesting limited impacts of moisture origin. Correlations of comparable magnitude are obtained for the available observational evidence (GNIP (Global Network of Isotopes in Precipitation) and Greenland ice core data). Our findings support the use of archives of past δ18O for NAO reconstructions.

Assimilation of in situ and satellite data in mechanistic terrestrial ecosystem models helps to constrain critical model parameters and reduce uncertainties in the simulated energy, water and carbon fluxes. So far the assimilation of eddy covariance measurements from flux-tower sites has been conducted mostly for individual sites ("single-site" optimization). Here we develop a variational data assimilation system to optimize 21 parameters of the ORCHIDEE biogeochemical model, using net CO2 flux (NEE) and latent heat flux (LE) measurements from 12 temperate deciduous broadleaf forest sites. We assess the potential of the model to simulate, with a single set of inverted parameters, the carbon and water fluxes at these 12 sites. We compare the fluxes obtained from this "multi-site" (MS) optimization to those of the prior model, and of the "single-site" (SS) optimizations. The model-data fit analysis shows that the MS approach decreases the daily root-mean-square difference (RMS) to observed data by 22%, which is close to the SS optimizations (25% on average). We also show that the MS approach distinctively improves the simulation of the ecosystem respiration (Reco), and to a lesser extent the gross primary productivity (GPP), although we only assimilated net CO2 flux. A process-oriented parameter analysis indicates that the MS inversion system finds a unique combination of parameters which is not the simple average of the different SS sets of parameters. Finally, in an attempt to validate the optimized model against independent data, we observe that global-scale simulations with MS optimized parameters show an enhanced phase agreement between modeled leaf area index (LAI) and satellite-based observations of normalized difference vegetation index (NDVI).

The influence of seasonal phenology on canopy photosynthesis in tropical evergreen forests remains poorly understood, and its representation in global ecosystem models is highly simplified, typically with no seasonal variation of canopy leaf properties taken into account. Including seasonal variation in leaf age and photosynthetic capacity could improve the correspondence of global vegetation model outputs with the wet–dry season CO2 patterns measured at flux tower sites in these forests. We introduced a leaf litterfall dynamics scheme in the global terrestrial ecosystem model ORCHIDEE based on seasonal variations in net primary production (NPP), resulting in higher leaf turnover in periods of high productivity. The modifications in the leaf litterfall scheme induce seasonal variation in leaf age distribution and photosynthetic capacity. We evaluated the results of the modification against seasonal patterns of three long-term in-situ leaf litterfall datasets of evergreen tropical forests in Panama, French Guiana and Brazil. In addition, we evaluated the impact of the model improvements on simulated latent heat (LE) and gross primary productivity (GPP) fluxes for the flux tower sites Guyaflux (French Guiana) and Tapajós (km 67, Brazil). The results show that the introduced seasonal leaf litterfall corresponds well with field inventory leaf litter data and times with its seasonality. Although the simulated litterfall improved substantially by the model modifications, the impact on the modelled fluxes remained limited. The seasonal pattern of GPP improved clearly for the Guyaflux site, but no significant improvement was obtained for the Tapajós site. The seasonal pattern of the modelled latent heat fluxes was hardly changed and remained consistent with the observed fluxes. We conclude that we introduced a realistic and generic litterfall dynamics scheme, but that other processes need to be improved in the model to achieve better simulations of GPP seasonal patterns for tropical evergreen forests.

We analyze how biases of meteorological drivers impact the calculation of ecosystem CO2, water and energy fluxes by models. To do so, we drive the same ecosystem model by meteorology from gridded products and by meteorology from local observation at eddy-covariance flux sites. The study is focused on six flux tower sites in France spanning across a climate gradient of 7–14 °C annual mean surface air temperature and 600–1040 mm mean annual rainfall, with forest, grassland and cropland ecosystems. We evaluate the results of the ORCHIDEE process-based model driven by meteorology from four different analysis data sets against the same model driven by site-observed meteorology. The evaluation is decomposed into characteristic time scales. The main result is that there are significant differences in meteorology between analysis data sets and local observation. The phase of seasonal cycle of air temperature, humidity and shortwave downward radiation is reproduced correctly by all meteorological models (average R2 = 0.90). At sites located in altitude, the misfit of meteorological drivers from analysis data sets and tower meteorology is the largest. We show that day-to-day variations in weather are not completely well reproduced by meteorological models, with R2 between analysis data sets and measured local meteorology going from 0.35 to 0.70. The bias of meteorological driver impacts the flux simulation by ORCHIDEE, and thus would have an effect on regional and global budgets. The forcing error, defined by the simulated flux difference resulting from prescribing modeled instead of observed local meteorology drivers to ORCHIDEE, is quantified for the six studied sites at different time scales. The magnitude of this forcing error is compared to that of the model error defined as the modeled-minus-observed flux, thus containing uncertain parameterizations, parameter values, and initialization. The forcing error is on average smaller than but still comparable to model error, with the ratio of forcing error to model error being the largest on daily time scale (86%) and annual time scales (80%). The forcing error incurred from using a gridded meteorological data set to drive vegetation models is therefore an important component of the uncertainty budget of regional CO2, water and energy fluxes simulations, and should be taken into consideration in up-scaling studies.

The Leaf Area Index (LAI) is a measure of the amount of photosynthetic leaves and governs the canopy conductance to water vapor and carbon dioxide. Four different estimates of LAI were compared over France: two LAI products derived from satellite remote sensing, and two LAI simulations derived from land surface modelling. The simulated LAI was produced by the ISBA-A-gs model and by the ORCHIDEE model (developed by CNRM-GAME and by IPSL, respectively), for the 1994–2007 period. The two models were driven by the same atmospheric variables and used the same land cover map (SAFRAN and ECOCLIMAP-II, respectively). The MODIS and CYCLOPES satellite LAI products were used. Both products were available from 2000 to 2007 and this relatively long period allowed to investigate the interannual and the seasonal variability of monthly LAI values. In particular the impact of the 2003 and 2005 droughts were analyzed. The two models presented contrasting results, with a difference of one month between the average leaf onset dates simulated by the two models, and a maximum interannual variability of LAI simulated at springtime by ORCHIDEE and at summertime by ISBA-A-gs. The comparison with the satellite LAI products showed that, in general, the seasonality was better represented by ORCHIDEE, while ISBA-A-gs tended to better represent the interannual variability, especially for grasslands. While the two models presented comparable values of net carbon fluxes, ORCHIDEE simulated much higher photosynthesis rates than ISBA-A-gs (+70%), while providing lower transpiration estimates (−8%).

Atmospheric CO2 drives most of the greenhouse effect increase. One major uncertainty on the future rate of increase of CO2 in the atmosphere is the impact of the anticipated climate change on the vegetation. Dynamic Global Vegetation Models (DGVM) are used to address this question. ORCHIDEE is such a DGVM that has proven useful for climate change studies. However, there is no objective and methodological way to accurately assess each new available version on the global scale. In this paper, we submit a methodological evaluation of ORCHIDEE by correlating satellite-derived Vegetation Index time series against those of the modeled Fraction of absorbed Photosynthetically Active Radiation (FPAR). A perfect correlation between the two is not expected, however an improvement of the model should lead to an increase of the overall performance. We detail two case studies in which model improvements are demonstrated, using our methodology. In the first one, a new phenology version in ORCHIDEE is shown to bring a significant impact on the simulated annual cycles, in particular for C3 Grasses and C3 Crops. In the second case study, we compare the simulations when using two different weather fields to drive ORCHIDEE. The ERA-Interim forcing leads to a better description of the FPAR interannual anomalies than the simulation forced by a mixed CRU-NCEP dataset. This work shows that long time series of satellite observations, despite their uncertainties, can identify weaknesses in global vegetation models, a necessary first step to improving them.

The sensitivity of global carbon and water cycling to climate variability is coupled directly to land cover and the distribution of vegetation. To investigate biogeochemistry-climate interactions, earth system models require a representation of vegetation distributions that are either prescribed from remote sensing data or simulated via biogeography models. However, the abstraction of earth system state variables in models means that data products derived from remote sensing need to be post-processed for model-data assimilation. Dynamic global vegetation models (DGVM) rely on the concept of plant functional types (PFT) to group shared traits of thousands of plant species into usually only 10–20 classes. Available databases of observed PFT distributions must be relevant to existing satellite sensors and their derived products, and to the present day distribution of managed lands. Here, we develop four PFT datasets based on land-cover information from three satellite sensors (EOS-MODIS 1 km and 0.5 km, SPOT4-VEGETATION 1 km, and ENVISAT-MERIS 0.3 km spatial resolution) that are merged with spatially-consistent Köppen-Geiger climate zones. Using a beta (ß) diversity metric to assess reclassification similarity, we find that the greatest uncertainty in PFT classifications occur most frequently between cropland and grassland categories, and in dryland systems between shrubland, grassland and forest categories because of differences in the minimum threshold required for forest cover. The biogeography-biogeochemistry DGVM, LPJmL, is used in diagnostic mode with the four PFT datasets prescribed to quantify the effect of land-cover uncertainty on climatic sensitivity of gross primary productivity (GPP) and transpiration fluxes. Our results show that land-cover uncertainty has large effects in arid regions, contributing up to 30% (20%) uncertainty in the sensitivity of GPP (transpiration) to precipitation. The availability of PFT datasets that are consistent with current satellite products and adapted for earth system models is an important component for reducing the uncertainty of terrestrial biogeochemistry to climate variability.

Winter CO2 fluxes represent an important component of the annual carbon budget in northern ecosystems. Understanding winter respiration processes and their responses to climate change is also central to our ability to assess terrestrial carbon cycle and climate feedbacks in the future. However, the factors influencing the spatial and temporal patterns of winter ecosystem respiration (Reco) of northern ecosystems are poorly understood. For this reason, we analyzed eddy covariance flux data from 57 ecosystem sites ranging from ~35° N to ~70° N. Deciduous forests were characterized by the highest winter Reco rates (0.90 ± 0.39 g C m−2 d−1), when winter is defined as the period during which daily air temperature remains below 0 °C. By contrast, arctic wetlands had the lowest winter Reco rates (0.02 ± 0.02 g C m−2 d−1). Mixed forests, evergreen needle-leaved forests, grasslands, croplands and boreal wetlands were characterized by intermediate winter Reco rates (g C m−2 d−1) of 0.70(±0.33), 0.60(±0.38), 0.62(±0.43), 0.49(±0.22) and 0.27(±0.08), respectively. Our cross site analysis showed that winter air (Tair) and soil (Tsoil) temperature played a dominating role in determining the spatial patterns of winter Reco in both forest and managed ecosystems (grasslands and croplands). Besides temperature, the seasonal amplitude of the leaf area index (LAI), inferred from satellite observation, or growing season gross primary productivity, which we use here as a proxy for the amount of recent carbon available for Reco in the subsequent winter, played a marginal role in winter CO2 emissions from forest ecosystems. We found that winter Reco sensitivity to temperature variation across space (QS) was higher than the one over time (interannual, QT). This can be expected because QS not only accounts for climate gradients across sites but also for (positively correlated) the spatial variability of substrate quantity. Thus, if the models estimate future warming impacts on Reco based on QS rather than QT, this could overestimate the impact of temperature changes.

The SEVIRI instrument on board Meteosat Second Generation (MSG) offers new capabilities to monitor aerosol transport over the Atlantic and the Mediterranean at high temporal and spatial resolutions, in particular, Saharan dust from North Africa, biomass-burning aerosols from subtropical Africa and pollution from Europe. An inversion technique was developed to estimate both aerosol optical thickness and Angström coefficients from SEVIRI measurements at 0.63 and 0.81 µm. This method relies on an optimized set of aerosol models to ensure a fast processing of full-resolution MSG images and to allow the processing of long time series. SEVIRI images for slots 45, 49 and 53 (11:15, 12:15, 13:15 UT) were processed for June 2003. The retrieved optical thicknesses and Angström coefficients are in good agreement with AERONET in-situ measurements in the Atlantic and in the Mediterranean. Monthly mean maps of both parameters are compared to that obtained with the polar orbiting sensor POLDER for June 2003. There is a good consistency between the two monthly means in terms of optical thickness, but the Angström coefficients show significant differences in the Atlantic zone which is affected by dust transport. These differences may be explained by the lack of specific non-spherical dust models within the inversion. The preliminary results presented in this paper demonstrate, nevertheless, the potential of MSG/SEVIRI for the monitoring of aerosol optical properties at high frequencies over the Atlantic and the Mediterranean.

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Les effets du sulfate d'ammonium sur la production de fourrage vert, de matière sèche et de foin de l'herbe d'Angleton sont étudiés. Les résultats de l'expérience permettent de conclure que: a) il augmente la production de fourrage vert et de matière sèche de cette herbe; b) l'engrais donne plus d'effet sur l'herbe coupée toutes les 4 semaines que sur l'herbe coupée toutes les 6 semaines; c) il semble que le pourcentage de matière sèche s'accroît avec l'âge de la plante; d) la production de foin, faible cependant, est plus élevée avec l'herbe d'Angleton fertilisée de 4 semaines qu'avec les autres. Pour ces raisons, l'éleveur a intérêt à utiliser cette herbe tropicale à 4 semaines ou avant. Il sera nécessaire de répéter cette expérience pour en tirer des conclusions définitives