33 results on '"Ergen B"'
Search Results
2. Circular hough transform based eye state detection in human face images
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Soylemez, Omer Faruk, primary and Ergen, B., additional
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- 2013
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3. Palmprint recognition using Gabor wavelet transform
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Caliskan, A., primary and Ergen, B., additional
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- 2013
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4. Classification of face images using discrete cosine transform
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Karhan, Z., primary and Ergen, B., additional
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- 2013
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5. Content based medical image retrieval feature extraction of using statistical spatial methods for content based medical image retrieval.
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Ergen, B. and Baykara, M.
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- 2010
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6. Feature extraction of using statistical spatial methods for content based medical image retrieval.
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Ergen, B. and Baykara, M.
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- 2010
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7. Characterization of phonocardiogram signals using bispectral estimation.
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Ergen, B. and Tatar, Y.
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- 2005
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8. 18F-FDG-PET/CT AND DIFFUSION MRI IN BONE SARCOMA: HISTOLOGIC AND IMAGING CORRELATION
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Burca Aydin, Caglar, M., Ergen, B., Bajin, I., Kurucu, N., Yalcin, B., Varan, A., Kutluk, T., Buyukpamukcu, M., and Akyuz, C.
9. Evaluation of Early Response to Neoadjuvant Chemotherapy with FDG PET/CT and MRI in Pediatric Patients with Bone Sarcoma
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Caglar, M., Burca Aydin, Ergen, B., Karabulut, E., and Akyuz, C.
10. Characterization of phonocardiogram signals using bispectral estimation
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Ergen, B., primary and Tatar, Y., additional
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11. The analysis of heart sounds based on linear and high order statistical methods
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Ergen, B., primary and Tatar, Y., additional
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12. The analysis of heart sounds based on linear and high order statistical methods.
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Ergen, B. and Tatar, Y.
- Published
- 2001
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13. Integration of two methods: buffer zone method and land property led urban conservation case study Tokat conservation plan
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Zeynep Ergen, K. Tobias, M. Ergen, Barış Ergen, Y. B. Ergen, and Ergen, B., Department of City and Regional Planning, Bozok University, Turkey -- Ergen, Y.B., Amasya University, Turkey -- Ergen, M., Amasya University, Turkey -- Tobias, K., Technische Universität Kaiserslautern, Germany -- Ergen, Z., Bozok University, Turkey
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Property (philosophy) ,Buffer zone ,business.industry ,Spatial structure ,Land property ,Conservation Plan ,Information technology ,Context (language use) ,Urban conservation plan ,GIS ,Buffer zone method ,Urban conservation ,Geography ,Threatened species ,Tokat ,business ,Environmental planning - Abstract
The International Journal of Design and Nature and Ecodynamics;The International Journal of SustainableDevelopment and Planning;WIT Transactions on Ecology and the Environment 7th International Conference on Urban Regeneration and Sustainability, SC 2012 -- 7 May 2012 through 9 May 2012 -- Ancona Urban historic areas are threatened by a multifaceted problem of physical, social, functional, and economic degradation. Moreover, changing hands of urban historic areas often results in the loss of interest to protect the historic sites. As a result, the accumulated memories between the owners and the spatial structure begin to disappear. In this sense, the ownership of historic buildings becomes important. To illustrate this, an Anatolian town with historic sites, Tokat, was selected. In this paper land property-led urban conservation (LPLUC) was improved with the buffer zones method (BZM). Information technology was used in order to create the buffer zones. BZM helps to calculate covered areas and their quality, and also to compute the quality of buildings with their covered areas, which are tabulated in each buffer zone. The buffer zones were created with GIS and the data of the urban historic sites were computed with GIS. This paper emphasizes, in the context of urban conservation land, the property-led conservation approach, the importance of using GIS in urban conservation processes and the impact of BZM in relation to the historic sites and the conservation plan of Tokat. © 2012 WIT Press.
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- 2012
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14. Experiences of Operating Room Nurses During the COVID-19 Pandemic: A Qualitative Study.
- Author
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Ergen B, Taşdemir N, and Yıldırım Tank D
- Subjects
- Humans, Pandemics, Operating Rooms, Qualitative Research, Adaptation, Psychological, COVID-19 epidemiology, Nurses
- Abstract
Purpose: The study was conducted to examine the experiences of operating room nurses during the COVID-19 pandemic., Design: This study was designed as a phenomenological qualitative research method., Methods: This study was conducted with 10 volunteer operating room nurses who met the criteria for participation in the study between February 2021 and March 2021 in a public hospital. Data were collected using a personal information form and a semistructured interview from using the in-depth interview technique. Two researchers and one expert created the themes and codes using the thematic analysis method., Findings: As a result of the analysis, four themes and 29 codes were identified. The following codes were created for the theme "Changing systems and practices in the operating room": Personal protective equipment and sterility, workload/time, lack of communication between patient and nurse, decrease in the number of cases, change in the use of emergencies and elective procedures, flexible working methods. On the theme of the impact of the pandemic, anxiety/anxiety, psychological distress, difficulty with personal protective equipment, lack of nurses, longing/distance from family, sleep disturbances, family problems, and difficulty working in another department were noted. On the theme of coping strategies for the pandemic, the codes found were; communication with family, breathing/sporting exercises, spirituality, regular/healthy diet, online shopping, watching TV series/movies, and acceptance of the process. On the theme of "learning from the pandemic," the codes of the importance of life/health, the importance of family, worthlessness of the caring profession, financial injustice, gaining work experience, the importance of personal protection, lack of union support, and job satisfaction were produced., Conclusions: The study found that the nursing in the operating room has changed due to the COVID-19 pandemic, that nurses have experienced many positive/negative impacts, and that they have gained many benefits from the pandemic through various coping methods., (Copyright © 2022 American Society of PeriAnesthesia Nurses. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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15. Detection of COVID-19 findings by the local interpretable model-agnostic explanations method of types-based activations extracted from CNNs.
- Author
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Toğaçar M, Muzoğlu N, Ergen B, Yarman BSB, and Halefoğlu AM
- Abstract
Covid-19 is a disease that affects the upper and lower respiratory tract and has fatal consequences in individuals. Early diagnosis of COVID-19 disease is important. Datasets used in this study were collected from hospitals in Istanbul. The first dataset consists of COVID-19, viral pneumonia, and bacterial pneumonia types. The second dataset consists of the following findings of COVID-19: ground glass opacity, ground glass opacity, and nodule, crazy paving pattern, consolidation, consolidation, and ground glass. The approach suggested in this paper is based on artificial intelligence. The proposed approach consists of three steps. As a first step, preprocessing was applied and, in this step, the Fourier Transform and Gradient-weighted Class Activation Mapping methods were applied to the input images together. In the second step, type-based activation sets were created with three different ResNet models before the Softmax method. In the third step, the best type-based activations were selected among the CNN models using the local interpretable model-agnostic explanations method and re-classified with the Softmax method. An overall accuracy success of 99.15% was achieved with the proposed approach in the dataset containing three types of image sets. In the dataset consisting of COVID-19 findings, an overall accuracy success of 99.62% was achieved with the recommended approach., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2021 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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16. Tumor type detection in brain MR images of the deep model developed using hypercolumn technique, attention modules, and residual blocks.
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Toğaçar M, Ergen B, and Cömert Z
- Subjects
- Attention, Brain diagnostic imaging, Humans, Neural Networks, Computer, Delayed Emergence from Anesthesia, Image Processing, Computer-Assisted
- Abstract
Brain cancer is a disease caused by the growth of abnormal aggressive cells in the brain outside of normal cells. Symptoms and diagnosis of brain cancer cases are producing more accurate results day by day in parallel with the development of technological opportunities. In this study, a deep learning model called BrainMRNet which is developed for mass detection in open-source brain magnetic resonance images was used. The BrainMRNet model includes three processing steps: attention modules, the hypercolumn technique, and residual blocks. To demonstrate the accuracy of the proposed model, three types of tumor data leading to brain cancer were examined in this study: glioma, meningioma, and pituitary. In addition, a segmentation method was proposed, which additionally determines in which lobe area of the brain the two classes of tumors that cause brain cancer are more concentrated. The classification accuracy rates were performed in the study; it was 98.18% in glioma tumor, 96.73% in meningioma tumor, and 98.18% in pituitary tumor. At the end of the experiment, using the subset of glioma and meningioma tumor images, it was determined which at brain lobe the tumor region was seen, and 100% success was achieved in the analysis of this determination. In this study, a hybrid deep learning model is presented to determine the detection of the brain tumor. In addition, open-source software was proposed, which statistically found in which lobe region of the human brain the brain tumor occurred. The methods applied and tested in the experiments have shown promising results with a high level of accuracy, precision, and specificity. These results demonstrate the availability of the proposed approach in clinical settings to support the medical decision regarding brain tumor detection.
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- 2021
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17. Proinflammatory cytokine profile is critical in autocrine GH-triggered curcumin resistance engulf by atiprimod cotreatment in MCF-7 and MDA-MB-231 breast cancer cells.
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Coker-Gurkan A, Ozakaltun B, Akdeniz BS, Ergen B, Obakan-Yerlikaya P, Akkoc T, and Arisan ED
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- Cell Survival drug effects, Cytokines metabolism, Female, Human Growth Hormone metabolism, Humans, MCF-7 Cells, Antineoplastic Agents administration & dosage, Antineoplastic Agents pharmacology, Apoptosis drug effects, Breast Neoplasms drug therapy, Cell Proliferation drug effects, Curcumin administration & dosage, Curcumin pharmacology, Spiro Compounds administration & dosage, Spiro Compounds pharmacology
- Abstract
Active growth hormone (GH) signaling triggers cellular growth and invasion-metastasis in colon, breast, and prostate cancer. Curcumin, an inhibitor of NF-ҡB pathway, is assumed to be a promising anti-carcinogenic agent. Atiprimod is also an anti-inflammatory, anti-carcinogenic agent that induces apoptotic cell death in hepatocellular carcinoma, multiple myeloma, and pituitary adenoma. We aimed to demonstrate the potential additional effect of atiprimod on curcumin-induced apoptotic cell death via cytokine expression profiles in MCF-7 and MDA-MB-231 cells with active GH signaling. The effect of curcumin and/or atiprimod on IL-2, IL-4, and IL-17A levels were measured by ELISA assay. MTT cell viability, trypan blue exclusion, and colony formation assays were performed to determine the effect of combined drug exposure on cell viability, growth, and colony formation, respectively. Alteration of the NF-ҡB signaling pathway protein expression profile was determined following curcumin and/or atiprimod exposure by RT-PCR and immunoblotting. Finally, the effect of curcumin with/without atiprimod treatment on Reactive Oxygen Species (ROS) generation and apoptotic cell death was examined by DCFH-DA and Annexin V/PI FACS flow analysis, respectively. Autocrine GH-mediated IL-6, IL-8, IL-10 expressions were downregulated by curcumin treatment. Atiprimod co-treatment increased the inhibitory effect of curcumin on cell viability, proliferation and also increased the curcumin-triggered ROS generation in each GH
+ breast cancer cells. Combined drug exposure increased apoptotic cell death through acting on IL-2, IL-4, and IL-17A secretion. Forced GH-triggered curcumin resistance might be overwhelmed by atiprimod and curcumin co-treatment via modulating NF-ҡB-mediated inflammatory cytokine expression in MCF-7 and MDA-MB-231 cells.- Published
- 2020
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18. COVID-19 detection using deep learning models to exploit Social Mimic Optimization and structured chest X-ray images using fuzzy color and stacking approaches.
- Author
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Toğaçar M, Ergen B, and Cömert Z
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- Artificial Intelligence, COVID-19, Color, Computational Biology, Databases, Factual, Fuzzy Logic, Humans, Lung diagnostic imaging, Pandemics, Pneumonia diagnostic imaging, Radiographic Image Interpretation, Computer-Assisted, SARS-CoV-2, Support Vector Machine, Betacoronavirus, Coronavirus Infections diagnosis, Coronavirus Infections diagnostic imaging, Deep Learning, Pneumonia, Viral diagnosis, Pneumonia, Viral diagnostic imaging
- Abstract
Coronavirus causes a wide variety of respiratory infections and it is an RNA-type virus that can infect both humans and animal species. It often causes pneumonia in humans. Artificial intelligence models have been helpful for successful analyses in the biomedical field. In this study, Coronavirus was detected using a deep learning model, which is a sub-branch of artificial intelligence. Our dataset consists of three classes namely: coronavirus, pneumonia, and normal X-ray imagery. In this study, the data classes were restructured using the Fuzzy Color technique as a preprocessing step and the images that were structured with the original images were stacked. In the next step, the stacked dataset was trained with deep learning models (MobileNetV2, SqueezeNet) and the feature sets obtained by the models were processed using the Social Mimic optimization method. Thereafter, efficient features were combined and classified using Support Vector Machines (SVM). The overall classification rate obtained with the proposed approach was 99.27%. With the proposed approach in this study, it is evident that the model can efficiently contribute to the detection of COVID-19 disease., Competing Interests: Declaration of competing interest The authors declare that there is no conflict to interest related to this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
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- 2020
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19. Application of breast cancer diagnosis based on a combination of convolutional neural networks, ridge regression and linear discriminant analysis using invasive breast cancer images processed with autoencoders.
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Toğaçar M, Ergen B, and Cömert Z
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- Algorithms, Artificial Intelligence, Discriminant Analysis, Female, Humans, Image Processing, Computer-Assisted methods, Linear Models, Machine Learning, Neoplasm Invasiveness, Neural Networks, Computer, Programming Languages, Reproducibility of Results, Sensitivity and Specificity, Software, Breast Neoplasms diagnosis, Carcinoma, Ductal, Breast diagnosis, Diagnosis, Computer-Assisted methods
- Abstract
Invasive ductal carcinoma cancer, which invades the breast tissues by destroying the milk channels, is the most common type of breast cancer in women. Approximately, 80% of breast cancer patients have invasive ductal carcinoma and roughly 66.6% of these patients are older than 55 years. This situation points out a powerful relationship between the type of breast cancer and progressed woman age. In this study, the classification of invasive ductal carcinoma breast cancer is performed by using deep learning models, which is the sub-branch of artificial intelligence. In this scope, convolutional neural network models and the autoencoder network model are combined. In the experiment, the dataset was reconstructed by processing with the autoencoder model. The discriminative features obtained from convolutional neural network models were utilized. As a result, the most efficient features were determined by using the ridge regression method, and classification was performed using linear discriminant analysis. The best success rate of classification was achieved as 98.59%. Consequently, the proposed approach can be admitted as a successful model in the classification., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
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- 2020
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20. BrainMRNet: Brain tumor detection using magnetic resonance images with a novel convolutional neural network model.
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Toğaçar M, Ergen B, and Cömert Z
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- Algorithms, Brain Neoplasms classification, Datasets as Topic, Early Detection of Cancer, Brain Neoplasms diagnostic imaging, Deep Learning, Diagnosis, Computer-Assisted methods, Image Processing, Computer-Assisted methods, Magnetic Resonance Imaging methods, Neuroimaging methods, Signal Processing, Computer-Assisted
- Abstract
A brain tumor is a mass that grows unevenly in the brain and directly affects human life. This mass occurs spontaneously because of the tissues surrounding the brain or the skull. Surgical methods are generally preferred for the treatment of the brain tumor. Recently, models of deep learning in the diagnosis and treatment of diseases in the biomedical field have gained intense interest. In this study, we propose a new convolutional neural network model named BrainMRNet. This architecture is built on attention modules and hypercolumn technique; it has a residual network. Firstly, image is preprocessed in BrainMRNet. Then, this step is transferred to attention modules using image augmentation techniques for each image. Attention modules select important areas of the image and the image is transferred to convolutional layers. One of the most important techniques that the BrainMRNet model uses in the convolutional layers is hypercolumn. With the help of this technique, the features extracted from each layer of the BrainMRNet model are retained by the array structure in the last layer. The aim is to select the best and the most efficient features among the features maintained in the array. Accessible magnetic resonance images were used to detect brain tumor with the BrainMRNet model. BrainMRNet model is more successful than the pre-trained convolutional neural network models (AlexNet, GoogleNet, VGG-16) used in this study. The classification success achieved with the BrainMRNet model was 96.05%., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2020
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21. Ischiofemoral impingement revisited: what physiatrists need to know in short.
- Author
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Ata AM, Yavuz H, Kaymak B, Ozcan HN, Ergen B, and Ozçakar L
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- Arthralgia etiology, Buttocks, Female, Humans, Low Back Pain etiology, Magnetic Resonance Imaging, Middle Aged, Musculoskeletal Manipulations methods, Pain Management methods, Femoracetabular Impingement diagnosis, Femoracetabular Impingement therapy, Musculoskeletal Pain etiology, Musculoskeletal Pain therapy
- Published
- 2014
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22. Evaluation of internal auditory canal structures in tinnitus of unknown origin.
- Author
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Polat C, Baykara M, and Ergen B
- Abstract
Objectives: The aim of the present study was to evaluate the internal auditory canal (IAC) and the nerves inside it to define possible structural differences in cases with subjective tinnitus of unknown origin., Methods: Cases applying to the ear, nose and throat department with the complaint of tinnitus with unknown origin and having normal physical examination and test results were included in the study (n=78). Patients admitted to the radiology clinic for routine cranial magnetic resonance imaging (MRI) and whose MRI findings revealed no pathologies were enrolled as the control group (n=79). Data for the control group were obtained from the radiology department and informed consent was obtained from all the patients. Diameters of the IAC and the nerves inside it were measured through enhanced images obtained by routine temporal bone MRIs in all cases. Statistical evaluations were performed using Student t-test and statistical significance was defined as P<0.05., Results: Measurements of IAC diameters revealed statistically significant differences between the controls and the tinnitus group (P<0.05). Regarding the diameters of the cochlear nerve, facial nerve, inferior vestibular nerve, superior vestibular nerve, and total vestibular nerve, no statistically significant difference was found between the controls and the tinnitus group., Conclusion: Narrowed IAC has to be assessed as an etiological factor in cases with subjective tinnitus of unknown origin.
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- 2014
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23. A fusion method of Gabor wavelet transform and unsupervised clustering algorithms for tissue edge detection.
- Author
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Ergen B
- Subjects
- Image Enhancement instrumentation, Magnetic Resonance Imaging, Phantoms, Imaging, Reproducibility of Results, Tomography, X-Ray Computed, Algorithms, Fuzzy Logic, Image Enhancement methods, Image Processing, Computer-Assisted methods
- Abstract
This paper proposes two edge detection methods for medical images by integrating the advantages of Gabor wavelet transform (GWT) and unsupervised clustering algorithms. The GWT is used to enhance the edge information in an image while suppressing noise. Following this, the k-means and Fuzzy c-means (FCM) clustering algorithms are used to convert a gray level image into a binary image. The proposed methods are tested using medical images obtained through Computed Tomography (CT) and Magnetic Resonance Imaging (MRI) devices, and a phantom image. The results prove that the proposed methods are successful for edge detection, even in noisy cases.
- Published
- 2014
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24. Comparison of magnetic resonance imaging findings with arthroscopic findings in discoid meniscus.
- Author
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Yilgor C, Atay OA, Ergen B, and Doral MN
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- Adolescent, Adult, Arthroscopy, Child, Child, Preschool, Female, Humans, Knee Injuries surgery, Male, Menisci, Tibial surgery, Middle Aged, Retrospective Studies, Rupture diagnosis, Rupture surgery, Sensitivity and Specificity, Young Adult, Knee Injuries diagnosis, Magnetic Resonance Imaging, Tibial Meniscus Injuries
- Abstract
Purpose: It is widely accepted that although valuable in the diagnosis of the discoid meniscus and tears, magnetic resonance imaging (MRI) can be insufficient in determining the type of the tear. This study calculates the sensitivity and specificity of MRI in determining the presence and absence of tears and how these values differ for different types of tears., Methods: This study is a retrospective review of 10 years of our experience with arthroscopic discoid meniscus treatment between 1999 and 2009. MRI findings were compared with the intraoperative arthroscopic findings in 52 patients with 50 lateral and two medial discoid menisci of which 24 were complete and 28 were incomplete. Tears were classified into six groups: (1) no tear, (2) simple horizontal tear, (3) radial tear, (4) combined horizontal tear, (5) complex tear and (6) longitudinal tear. Sensitivity, specificity, positive and negative predictive values of MRI were calculated for each group separately and for the presence and absence of tears in general. In addition, the effect of age, type of discoid meniscus, and presence and absence of shift on the distribution of tear types were analysed., Results: MRI was found to be 100 % specific and 97.8 % sensitive for determining the presence or absence of a tear with a negative predictive value of 85.7 % and a positive predictive value of 100 %. The specificities were 80 % for simple horizontal, 50 % for radial, 66.7 % for combined horizontal, 55.6 % for complex and 14.3 % for longitudinal tears, whereas the sensitivities were 66.7 % for simple horizontal, 96.9 % for radial, 87.5 % for combined horizontal, 94.6 % for complex and 100 % for longitudinal tears. The presence and absence of shift and type of the discoid were found to affect the distribution of the tear type., Conclusions: MRI is successful in determining the presence or absence of tears in discoid menisci; however, its ability to determine the tear type is questionable. Complete discoid menisci were found to have tendency towards having a simple horizontal or longitudinal tear, whereas incomplete discoid menisci tend to have radial or combined horizontal tears. Determination of the shift prior to surgery is important since it alters the surgical technique.
- Published
- 2014
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25. Texture based feature extraction methods for content based medical image retrieval systems.
- Author
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Ergen B and Baykara M
- Subjects
- Image Enhancement methods, Reproducibility of Results, Sensitivity and Specificity, Wavelet Analysis, Algorithms, Artificial Intelligence, Data Mining methods, Image Interpretation, Computer-Assisted methods, Pattern Recognition, Automated methods, Radiology Information Systems organization & administration, Subtraction Technique
- Abstract
The developments of content based image retrieval (CBIR) systems used for image archiving are continued and one of the important research topics. Although some studies have been presented general image achieving, proposed CBIR systems for archiving of medical images are not very efficient. In presented study, it is examined the retrieval efficiency rate of spatial methods used for feature extraction for medical image retrieval systems. The investigated algorithms in this study depend on gray level co-occurrence matrix (GLCM), gray level run length matrix (GLRLM), and Gabor wavelet accepted as spatial methods. In the experiments, the database is built including hundreds of medical images such as brain, lung, sinus, and bone. The results obtained in this study shows that queries based on statistics obtained from GLCM are satisfied. However, it is observed that Gabor Wavelet has been the most effective and accurate method.
- Published
- 2014
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26. Development of femoral trochlear groove in growing rabbit after patellar instability.
- Author
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Huri G, Atay OA, Ergen B, Atesok K, Johnson DL, and Doral MN
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- Animals, Femur diagnostic imaging, Femur growth & development, Joint Instability diagnostic imaging, Joint Instability pathology, Patella diagnostic imaging, Patella surgery, Prospective Studies, Rabbits, Stifle diagnostic imaging, Stifle growth & development, Stifle surgery, Tomography, X-Ray Computed, Femur pathology, Joint Instability etiology, Patella pathology, Stifle pathology
- Abstract
Purpose: The geometry of an articular surface is an important determinant of joint function. Although the geometry of the trochlear groove is considered to be important in the pathogenesis of patellofemoral joint disorders, the effects of the patella during the development of the femoral trochlear groove are unclear. This animal study aimed to investigate the relationship between the position of the patella and development of femoral trochlear groove in growing rabbits., Methods: Twenty-four knees of 12 rabbits were included in this study and were divided into two groups. First group consisted of the left knees and was used as the control group to which no surgical procedures were applied. Second group involved the right knees to which medial soft tissue restraints release was applied before 1 month of age. Computed tomographic (CT) evaluation of both knees of each rabbit was made in their first month of age before medial retinacular release and also during post-op 1-year follow-up. CT measurements included both the angle and depth of the femoral trochlear groove from 3 different parts (proximal, middle and distal) of the distal femur, and then these measurements were averaged., Results: Measurements revealed that while in the control group the groove angle decreased 27.4 degrees and the depth increased 0.11 mm, in the operated counterparts groove angle decreased 16.8 degrees and groove depth increased 0.03 mm, which indicated the flattening of the femoral groove in the operated group. These differences were found to be statistically significant (P < 0.05)., Conclusion: The results indicated that distal femoral groove with inadequate patellar position becomes more flattened and causes predisposition for patellar instability. Consequently, the clinical relevance of this study was that early reconstruction of the patellofemoral joint should be performed in the childhood to prevent the patellofemoral problems that are likely to be encountered in the following years.
- Published
- 2012
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27. Time-frequency analysis of phonocardiogram signals using wavelet transform: a comparative study.
- Author
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Ergen B, Tatar Y, and Gulcur HO
- Subjects
- Bayes Theorem, Biomedical Engineering, Cardiovascular Diseases physiopathology, Computer Simulation, Heart Defects, Congenital diagnosis, Heart Defects, Congenital physiopathology, Heart Murmurs diagnosis, Heart Murmurs physiopathology, Humans, Models, Cardiovascular, Signal Processing, Computer-Assisted, Cardiovascular Diseases diagnosis, Heart Sounds, Phonocardiography statistics & numerical data
- Abstract
Analysis of phonocardiogram (PCG) signals provides a non-invasive means to determine the abnormalities caused by cardiovascular system pathology. In general, time-frequency representation (TFR) methods are used to study the PCG signal because it is one of the non-stationary bio-signals. The continuous wavelet transform (CWT) is especially suitable for the analysis of non-stationary signals and to obtain the TFR, due to its high resolution, both in time and in frequency and has recently become a favourite tool. It decomposes a signal in terms of elementary contributions called wavelets, which are shifted and dilated copies of a fixed mother wavelet function, and yields a joint TFR. Although the basic characteristics of the wavelets are similar, each type of the wavelets produces a different TFR. In this study, eight real types of the most known wavelets are examined on typical PCG signals indicating heart abnormalities in order to determine the best wavelet to obtain a reliable TFR. For this purpose, the wavelet energy and frequency spectrum estimations based on the CWT and the spectra of the chosen wavelets were compared with the energy distribution and the autoregressive frequency spectra in order to determine the most suitable wavelet. The results show that Morlet wavelet is the most reliable wavelet for the time-frequency analysis of PCG signals.
- Published
- 2012
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28. Comparison of oral nonsteroidal analgesic and intrauterine local anesthetic for pain relief in uterine fractional curettage: a randomized, double-blind, placebo-controlled trial.
- Author
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Api O, Ergen B, Api M, Ugurel V, Emeksiz MB, and Unal O
- Subjects
- Administration, Intravaginal, Administration, Oral, Adult, Anesthetics, Local administration & dosage, Anti-Inflammatory Agents, Non-Steroidal administration & dosage, Curettage adverse effects, Double-Blind Method, Female, Humans, Ketoprofen administration & dosage, Middle Aged, Pain Measurement methods, Statistics, Nonparametric, Tromethamine administration & dosage, Anesthesia, Local methods, Anesthesia, Obstetrical methods, Curettage methods, Ketoprofen analogs & derivatives, Lidocaine administration & dosage, Pain drug therapy, Tromethamine analogs & derivatives
- Abstract
Objective: We sought to investigate the analgesic efficacy of oral dexketoprofen trometamol and intrauterine lidocaine in patients undergoing fractional curettage., Study Design: A randomized, double-blind, placebo-controlled trial was conducted on 111 women. Subjects were randomly assigned into 4 groups to receive either 25 mg of dexketoprofen or similar-appearing placebo tablets and either 5 mL intrauterine 2% lidocaine or saline. The main outcome measure was the intensity of pain measured by a 10-cm visual analog scale. Pain scoring was performed prior to, during, and 30 minutes after the procedure., Results: No statistically significant difference was found among the mean pain scores of women during the procedure in the dexketoprofen and saline, placebo and lidocaine, and dexketoprofen and lidocaine groups. The mean pain scores in all 3 groups revealed significant reduction when compared with placebo and saline combination (P = .001)., Conclusion: Administration of intrauterine lidocaine or oral dexketoprofen appears to be effective in relieving fractional curettage associated pain. However, a combination of them does not work better in further reduction of pain., (Copyright (c) 2010 Mosby, Inc. All rights reserved.)
- Published
- 2010
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29. Successful pregnancy in a patient with portal hypertension secondary to portal vein thrombosis due to essential thrombocythaemia: a rare case.
- Author
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Buyukbayrak EE, Ergen B, Karageyim Karsidag AY, Kars B, Turan C, and Birtas Atesoglu E
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- Adult, Cesarean Section, Female, Humans, Pregnancy, Pregnancy Outcome, Hypertension, Portal complications, Portal Vein, Pregnancy Complications, Cardiovascular therapy, Pregnancy Complications, Hematologic therapy, Thrombocythemia, Essential complications, Venous Thrombosis complications
- Abstract
Essential thrombocythaemia (ET) is a disease characterized by an increased platelet count, megakaryocytic hyperplasia and a hemorrhagic or thrombotic tendency. Pregnancy in patients with ET can have a favorable outcome. However, ET has also been reported to complicate pregnancy by recurrent abortions, intrauterine death, and fetal growth retardation due to placental infarctions. ET has an unusual prevalence of intraabdominal (hepatic, portal and mesenteric) vein thrombosis, especially in young patients, which can lead to portal hypertension. There are ample cases in the literature of both essential thrombocytosis complicating pregnancy and portal hypertension complicating pregnancy, but the coincidence of both conditions appears to be unique. In this case report, we report a successful pregnancy in a patient with a prior diagnosis of essential thrombocytosis with remote secondary portal vein thrombosis and portal hypertension (PH).
- Published
- 2010
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30. Primary ovarian adenomyoma in a woman with endometrial polyp: a case report and review of the literature.
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Api O, Ergen B, Gul AE, Ergen C, Unal O, and Turan C
- Subjects
- Adenomyoma diagnostic imaging, Female, Humans, Middle Aged, Ovarian Neoplasms diagnostic imaging, Polyps diagnostic imaging, Ultrasonography, Uterine Diseases diagnostic imaging, Adenomyoma surgery, Ovarian Neoplasms surgery, Polyps surgery, Uterine Diseases surgery
- Abstract
Background: An adenomyoma presenting outside the uterus is an extremely rare entity and only three cases of primary ovarian adenomyoma have been reported up to date., Case Report: We report the fourth case of ovarian adenomyoma in a 45-year-old woman with an endometrial polyp. Transvaginal ultrasonography revealed a solitary endometrial polyp with an enlarged left ovary which appeared heterogenous with isoechoic and mildly hyperechoic pattern., Conclusion: Total abdominal hysterectomy and bilateral salpingo-oopherectomy was performed and histologic examination revealed an adenomyoma arising primarily in the ovary.
- Published
- 2009
- Full Text
- View/download PDF
31. Pregnancy complicated with chronic myelogeneous leukemia (CML) successfully treated with imatinib: a case report.
- Author
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Buyukbayrak EE, Ergen B, Karsidag YK, Kars B, Turan C, and Argon D
- Subjects
- Adult, Benzamides, Female, Humans, Imatinib Mesylate, Pregnancy, Pregnancy Outcome, Treatment Outcome, Antineoplastic Agents therapeutic use, Leukemia, Myelogenous, Chronic, BCR-ABL Positive drug therapy, Piperazines therapeutic use, Pregnancy Complications, Neoplastic drug therapy, Pyrimidines therapeutic use
- Abstract
Pregnancy and cancer is a complex situation. The coincidence of chronic myelogeneous leukemia (CML) and pregnancy is an uncommon event, in part because CML occurs mostly in older age groups. The management of CML during pregnancy is a difficult problem because of the potential effects of the therapy on the mother and fetus. Imatinib is a relatively new drug in this era and it induces dramatic hematologic and cytogenetic responses in CML but it is not recommended for use during pregnancy or if the patient plans to conceive. In the literature there are very few reports of outcome of pregnancy conceived while on imatinib. In this report, we describe a successful pregnancy and labor under treatment of imatinib in a patient who was diagnosed with CML at the beginning of her pregnancy.
- Published
- 2008
- Full Text
- View/download PDF
32. Low-grade endometrial stromal sarcoma with retroperitoneal metastases: an unusual case report.
- Author
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Guzelmeric K, Ergen B, Pirimoglu ZM, Gecer MO, Unal O, and Turan C
- Subjects
- Fallopian Tubes surgery, Female, Humans, Hysterectomy, Lymph Node Excision, Middle Aged, Ovariectomy, Endometrial Neoplasms pathology, Retroperitoneal Neoplasms secondary, Sarcoma, Endometrial Stromal pathology, Sarcoma, Endometrial Stromal secondary
- Abstract
Background: Endometrial stromal sarcoma (ESS) is an uncommon malign neoplasm, and its occurrence outside the uterus is extremely rare in the absence of metastasis or extension of a primary uterine neoplasm. When arising in the pelvis or abdominal cavity, ESS is associated with uterine adnexa or serosal surface of various organs., Case: We present the case of a 46-year-old woman with lower abdominal pain and regular menstruation who underwent laparotomy after a diagnosis of pelvic mass mimicking a right adnexial tumor. Exploration of the pelvis revealed a retroperitoneal mass of 15 cm in diameter in the right illiac fossa without accompanying pelvic or paraaortic lymphadenopathy. Uterus and ovaries were bilaterally normal in size. The pathology showed low-grade ESS of the uterus with direct spread to retroperitoneum without serosal metastases., Conclusion: This case shows that despite its well-known good prognostic nature, low-grade ESS may behave as an aggressive malignancy.
- Published
- 2008
- Full Text
- View/download PDF
33. Imaging findings in congenital hepatic fibrosis.
- Author
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Akhan O, Karaosmanoğlu AD, and Ergen B
- Subjects
- Humans, Image Enhancement methods, Liver Cirrhosis congenital, Liver Cirrhosis diagnosis, Magnetic Resonance Imaging methods, Tomography, X-Ray Computed methods, Ultrasonography methods
- Abstract
Congenital hepatic fibrosis (CHF) is a rare congenital multisystemic disorder, mostly inherited in autosomal recessive fashion, primarily affecting renal and hepatobiliary systems. Main underlying process of the disease is the malformation of the ductal plate, the embryological precursor of the biliary system, and secondary biliary strictures and periportal fibrosis ultimately leading to portal hypertension. The natural course of the disease is highly variable ranging from minimally symptomatic disease to true cirrhosis of the liver. However, in most patients the most common manifestations of the diseases that are related to portal hypertension, particularly splenomegaly and bleeding varices. Many other disease processes may co-exist with the disease including Caroli's disease, choledochal cysts and autosomal recessive polycystic kidney disease (ARPKD) reflecting the mulstisystemic nature of the disease. The associating biliary ductal disease led the authors to think that all these entities are a continuum and different reflections of the same underlying pathophysiological process. Although, conventional method of diagnosis of CHF is the liver biopsy the advent of imaging technologies and modalities, today, may permit the correct diagnosis in a non-invasive manner. Characteristic imaging features are generally present and recognition of these findings may obviate liver biopsy while preserving the diagnostic accuracy. In this article, it is aimed to increase the awareness of the practising radiologists to the imaging findings of this uncommon clinical disorder and trail the blaze for future articles relating to this issue.
- Published
- 2007
- Full Text
- View/download PDF
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