34 results on '"Elizabeth, Dufort"'
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2. Seasonal patterns of initial domestic health assessment for refugees in New York State, 2013
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Zahra Alaali, Christina Ehret, Elizabeth Dufort, Colette Gargiulo, Diane Miller, Susan Towne, Stephen Hughes, and Debra Blog
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Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Published
- 2016
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3. Incidence of Multisystem Inflammatory Syndrome in Children Among US Persons Infected With SARS-CoV-2
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Laura Edison, Gayle E Langley, Heidi R. Flori, Alexandra Edmundson, Aalok R. Singh, Kaitlin J. Jones, Adrienne G. Randolph, Dana Perella, Jenna Lifshitz, Michael Pietrowski, Lawrence C. Kleinman, Reed Magleby, Manish M. Patel, Phoebe H. Yager, Zunera Gilani, Karen S. Walker, Katherine K. Hsu, Sunanda Gaur, Margaret M Newhams, Brooke E. Hoots, Amanda B. Payne, Cole Burkholder, Matthew E. Oster, Sabrina M. Heidemann, Katharine N. Clouser, Saul R. Hymes, Sally Bidol, Neha Balachandran, Julie C. Fitzgerald, Ilana Harwayne-Gidansky, Kimberly L. Marohn, Ian Charpie, Rowan Walsh, Thomas S. Murray, Susan E. Coffin, Deepam Thomas, Angela P Campbell, Lynn E Sosa, Melissa Tobin-D’Angelo, Allison Longenberger, Cory Tice, Simon Li, Elizabeth Dufort, Justin Henderson, Shira J. Gertz, Angie M. Maxted, Maria Cecilia Di Pentima, John S. Giuliano, Monica L. Koncicki, Timmy Pierce, Dylan Leach, Keiko M. Tarquinio, Leora R. Feldstein, Dennis C. Coffey, Carrie Reed, Ermias D. Belay, Neal J. Thomas, Kate G. Ackerman, Shana Godfred-Cato, Jill M. Cholette, Neil D. Fernandes, Aaron T. Curns, Steven M. Horwitz, Christopher L. Carroll, Meagan Burns, Ryan W. Carroll, Troy Brancard, and F. Scott Dahlgren
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Male ,Adolescent ,Population ,Ethnic group ,Rate ratio ,Cohort Studies ,Young Adult ,Age Distribution ,Interquartile range ,otorhinolaryngologic diseases ,Medicine ,Humans ,Young adult ,education ,Child ,Original Investigation ,education.field_of_study ,business.industry ,SARS-CoV-2 ,Incidence (epidemiology) ,Research ,Incidence ,Racial Groups ,COVID-19 ,General Medicine ,Systemic Inflammatory Response Syndrome ,United States ,Online Only ,Child, Preschool ,Pacific islanders ,Female ,Public Health ,business ,Demography ,Cohort study - Abstract
Key Points Question What was the incidence of multisystem inflammatory syndrome in children (MIS-C) among persons with SARS-CoV-2 infection in the US during April to June 2020? Findings In this cohort study of 248 persons with MIS-C, MIS-C incidence was 5.1 persons per 1 000 000 person-months and 316 persons per 1 000 000 SARS-CoV-2 infections in persons younger than 21 years. Incidence was higher among Black, Hispanic or Latino, and Asian or Pacific Islander persons compared with White persons and in younger persons compared with older persons. Meaning These findings suggest that MIS-C was a rare complication of SARS-CoV-2 infection; further study is needed to understand why MIS-C incidence varied by race/ethnicity and age group., This cohort study examines the incidence of multisystem inflammatory syndrome in children among persons in the US with SARS-CoV-2 infection., Importance Multisystem inflammatory syndrome in children (MIS-C) is associated with recent or current SARS-CoV-2 infection. Information on MIS-C incidence is limited. Objective To estimate population-based MIS-C incidence per 1 000 000 person-months and to estimate MIS-C incidence per 1 000 000 SARS-CoV-2 infections in persons younger than 21 years. Design, Setting, and Participants This cohort study used enhanced surveillance data to identify persons with MIS-C during April to June 2020, in 7 jurisdictions reporting to both the Centers for Disease Control and Prevention national surveillance and to Overcoming COVID-19, a multicenter MIS-C study. Denominators for population-based estimates were derived from census estimates; denominators for incidence per 1 000 000 SARS-CoV-2 infections were estimated by applying published age- and month-specific multipliers accounting for underdetection of reported COVID-19 case counts. Jurisdictions included Connecticut, Georgia, Massachusetts, Michigan, New Jersey, New York (excluding New York City), and Pennsylvania. Data analyses were conducted from August to December 2020. Exposures Race/ethnicity, sex, and age group (ie, ≤5, 6-10, 11-15, and 16-20 years). Main Outcomes and Measures Overall and stratum-specific adjusted estimated MIS-C incidence per 1 000 000 person-months and per 1 000 000 SARS-CoV-2 infections. Results In the 7 jurisdictions examined, 248 persons with MIS-C were reported (median [interquartile range] age, 8 [4-13] years; 133 [53.6%] male; 96 persons [38.7%] were Hispanic or Latino; 75 persons [30.2%] were Black). The incidence of MIS-C per 1 000 000 person-months was 5.1 (95% CI, 4.5-5.8) persons. Compared with White persons, incidence per 1 000 000 person-months was higher among Black persons (adjusted incidence rate ratio [aIRR], 9.26 [95% CI, 6.15-13.93]), Hispanic or Latino persons (aIRR, 8.92 [95% CI, 6.00-13.26]), and Asian or Pacific Islander (aIRR, 2.94 [95% CI, 1.49-5.82]) persons. MIS-C incidence per 1 000 000 SARS-CoV-2 infections was 316 (95% CI, 278-357) persons and was higher among Black (aIRR, 5.62 [95% CI, 3.68-8.60]), Hispanic or Latino (aIRR, 4.26 [95% CI, 2.85-6.38]), and Asian or Pacific Islander persons (aIRR, 2.88 [95% CI, 1.42-5.83]) compared with White persons. For both analyses, incidence was highest among children aged 5 years or younger (4.9 [95% CI, 3.7-6.6] children per 1 000 000 person-months) and children aged 6 to 10 years (6.3 [95% CI, 4.8-8.3] children per 1 000 000 person-months). Conclusions and Relevance In this cohort study, MIS-C was a rare complication associated with SARS-CoV-2 infection. Estimates for population-based incidence and incidence among persons with infection were higher among Black, Hispanic or Latino, and Asian or Pacific Islander persons. Further study is needed to understand variability by race/ethnicity and age group.
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- 2021
4. COVID-19 Investigational Treatments in Use Among Hospitalized Patients Identified Through the US Coronavirus Disease 2019–Associated Hospitalization Surveillance Network, March 1–June 30, 2020
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Huong Pham, Alicia M. Fry, Aron J. Hall, Nancy M. Bennett, Nisha B Alden, Andrew I. Geller, Anna M. Acosta, Melissa Sutton, Salina Torres, Lindsay Kim, Kathryn Como-Sabetti, Patricia Ryan, Laurie M Billing, Elizabeth Dufort, Shua J Chai, Adria L Mathis, James Meek, Daniel S. Budnitz, Shikha Garg, Sue Kim, H. Keipp Talbot, Evan J. Anderson, and Andrea George
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medicine.medical_specialty ,2019-20 coronavirus outbreak ,Coronavirus disease 2019 (COVID-19) ,Hospitalized patients ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,coronavirus ,030204 cardiovascular system & hematology ,Azithromycin ,medicine.disease_cause ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,therapeutics ,medicine ,030212 general & internal medicine ,Coronavirus ,business.industry ,Brief Report ,Hydroxychloroquine ,Editor's Choice ,AcademicSubjects/MED00290 ,Infectious Diseases ,Oncology ,business ,hospitalization ,medicine.drug - Abstract
Using a coronavirus disease 2019 (COVID-19)–associated hospitalization surveillance network, we found that 42.5% of hospitalized COVID-19 cases with available data from March 1–June 30, 2020, received ≥1 COVID-19 investigational treatment. Hydroxychloroquine, azithromycin, and remdesivir were used frequently; however, hydroxychloroquine and azithromycin use declined over time, while use of remdesivir increased., Using data collected from a national surveillance network for COVID-19-associated hospitalizations, we describe inpatient COVID-19 investigational treatment use from March-June, 2020. Overall, hydroxychloroquine, azithromycin and remdesivir were used frequently. Over time, use of hydroxychloroquine and azithromycin declined, while remdesivir increased.
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- 2020
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5. SARS-CoV-2-Associated Deaths Among Persons Aged21 Years - United States, February 12-July 31, 2020
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Danae, Bixler, Allison D, Miller, Claire P, Mattison, Burnestine, Taylor, Kenneth, Komatsu, Xandy, Peterson Pompa, Steve, Moon, Ellora, Karmarkar, Caterina Y, Liu, John J, Openshaw, Rosalyn E, Plotzker, Hilary E, Rosen, Nisha, Alden, Breanna, Kawasaki, Alan, Siniscalchi, Andrea, Leapley, Cherie, Drenzek, Melissa, Tobin-D'Angelo, Judy, Kauerauf, Heather, Reid, Eric, Hawkins, Kelly, White, Farah, Ahmed, Julie, Hand, Gillian, Richardson, Theresa, Sokol, Seth, Eckel, Jim, Collins, Stacy, Holzbauer, Leslie, Kollmann, Linnea, Larson, Elizabeth, Schiffman, Theresa S, Kittle, Kimberly, Hertin, Vit, Kraushaar, Devin, Raman, Victoria, LeGarde, Lindsey, Kinsinger, Melissa, Peek-Bullock, Jenna, Lifshitz, Mojisola, Ojo, Robert J, Arciuolo, Alexander, Davidson, Mary, Huynh, Maura K, Lash, Julia, Latash, Ellen H, Lee, Lan, Li, Emily, McGibbon, Natasha, McIntosh-Beckles, Renee, Pouchet, Jyotsna S, Ramachandran, Kathleen H, Reilly, Elizabeth, Dufort, Wendy, Pulver, Ariela, Zamcheck, Erica, Wilson, Sietske, de Fijter, Ozair, Naqvi, Kumar, Nalluswami, Kirsten, Waller, Linda J, Bell, Anna-Kathryn, Burch, Rachel, Radcliffe, Michelle D, Fiscus, Adele, Lewis, Jonathan, Kolsin, Stephen, Pont, Andrea, Salinas, Kelsey, Sanders, Bree, Barbeau, Sandy, Althomsons, Sukhshant, Atti, Jessica S, Brown, Arthur, Chang, Kevin R, Clarke, S Deblina, Datta, John, Iskander, Brooke, Leitgeb, Talia, Pindyck, Lalita, Priyamvada, Sarah, Reagan-Steiner, Nigel A, Scott, Laura J, Viens, Jonathan, Zhong, Emilia H, Koumans, and Xia, Lin
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Male ,medicine.medical_specialty ,Health (social science) ,Adolescent ,Epidemiology ,Health, Toxicology and Mutagenesis ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Population ,Pneumonia, Viral ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Health Information Management ,030225 pediatrics ,Cause of Death ,Pandemic ,medicine ,Humans ,030212 general & internal medicine ,Young adult ,education ,Child ,Pandemics ,Cause of death ,education.field_of_study ,business.industry ,Incidence (epidemiology) ,Public health ,COVID-19 ,Infant ,General Medicine ,Emergency department ,United States ,Child, Preschool ,Female ,business ,Coronavirus Infections ,Demography - Abstract
Since February 12, 2020, approximately 6.5 million cases of SARS-CoV-2 infection, the cause of coronavirus disease 2019 (COVID-19), and 190,000 SARS-CoV-2-associated deaths have been reported in the United States (1,2). Symptoms associated with SARS-CoV-2 infection are milder in children compared with adults (3). Persons aged
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- 2020
6. Acute Cardiovascular Events Associated With Influenza in Hospitalized Adults: A Cross-sectional Study
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Laurie M Billing, Chelsea McMullen, Elizabeth Dufort, Rachel Herlihy, Nancy M. Bennett, Alissa O’Halloran, H. Keipp Talbot, Ruth Lynfield, Evan J. Anderson, Melissa A Rolfes, Maya Monroe, Melanie Spencer, Shua Chai, William Schaffner, Shikha Garg, Carrie Reed, Kimberly Yousey-Hindes, Sue Kim, Eric J. Chow, and Ann Thomas
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Adult ,medicine.medical_specialty ,Cross-sectional study ,Population ,Disease ,01 natural sciences ,Article ,03 medical and health sciences ,0302 clinical medicine ,Interquartile range ,Diabetes mellitus ,Influenza, Human ,Internal Medicine ,medicine ,Secondary Prevention ,Humans ,030212 general & internal medicine ,0101 mathematics ,education ,education.field_of_study ,business.industry ,Medical record ,010102 general mathematics ,Vaccination ,General Medicine ,medicine.disease ,Cross-Sectional Studies ,Cardiovascular Diseases ,Influenza Vaccines ,Relative risk ,Emergency medicine ,business - Abstract
Background Influenza may contribute to the burden of acute cardiovascular events during annual influenza epidemics. Objective To examine acute cardiovascular events and determine risk factors for acute heart failure (aHF) and acute ischemic heart disease (aIHD) in adults with a hospitalization associated with laboratory-confirmed influenza. Design Cross-sectional study. Setting U.S. Influenza Hospitalization Surveillance Network during the 2010-to-2011 through 2017-to-2018 influenza seasons. Participants Adults hospitalized with laboratory-confirmed influenza and identified through influenza testing ordered by a practitioner. Measurements Acute cardiovascular events were ascertained using discharge codes from the International Classification of Diseases (ICD), Ninth Revision, Clinical Modification, and ICD, 10th Revision. Age, sex, race/ethnicity, tobacco use, chronic conditions, influenza vaccination, influenza antiviral medication, and influenza type or subtype were included as exposures in logistic regression models, and marginal adjusted risk ratios and 95% CIs were estimated to describe factors associated with aHF or aIHD. Results Among 89 999 adults with laboratory-confirmed influenza, 80 261 had complete medical record abstractions and available ICD codes (median age, 69 years [interquartile range, 54 to 81 years]) and 11.7% had an acute cardiovascular event. The most common such events (non-mutually exclusive) were aHF (6.2%) and aIHD (5.7%). Older age, tobacco use, underlying cardiovascular disease, diabetes, and renal disease were significantly associated with higher risk for aHF and aIHD in adults hospitalized with laboratory-confirmed influenza. Limitation Underdetection of cases was likely because influenza testing was based on practitioner orders. Acute cardiovascular events were identified by ICD discharge codes and may be subject to misclassification bias. Conclusion In this population-based study of adults hospitalized with influenza, almost 12% of patients had an acute cardiovascular event. Clinicians should ensure high rates of influenza vaccination, especially in those with underlying chronic conditions, to protect against acute cardiovascular events associated with influenza. Primary funding source Centers for Disease Control and Prevention.
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- 2020
7. Multisystem Inflammatory Syndrome in Children in New York State
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Elizabeth Dufort, Brad Hutton, Wendy P Pulver, Lou C. Smith, Eli S. Rosenberg, Howard Zucker, Tomoko Udo, Delia Easton, Debra Blog, Emilia H. Koumans, Eric J. Chow, Angela M Maxted, Jemma Rowlands, Elizabeth M. Rosenthal, Alison Muse, Meredith A. Barranco, and Jessica Kumar
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2019-20 coronavirus outbreak ,Pediatrics ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Recem nascido ,General Medicine ,030204 cardiovascular system & hematology ,medicine.disease ,Mucocutaneous Lymph Node Syndrome ,humanities ,Systemic inflammatory response syndrome ,03 medical and health sciences ,Pneumonia ,0302 clinical medicine ,otorhinolaryngologic diseases ,Medicine ,Viral therapy ,Original Article ,030212 general & internal medicine ,business ,Coronavirus Infections - Abstract
Background A multisystem inflammatory syndrome in children (MIS-C) is associated with coronavirus disease 2019. The New York State Department of Health (NYSDOH) established active, statewide surveillance to describe hospitalized patients with the syndrome. Methods Hospitals in New York State reported cases of Kawasaki’s disease, toxic shock syndrome, myocarditis, and potential MIS-C in hospitalized patients younger than 21 years of age and sent medical records to the NYSDOH. We carried out descriptive analyses that summarized the clinical presentation, complications, and outcomes of patients who met the NYSDOH case definition for MIS-C between March 1 and May 10, 2020. Results As of May 10, 2020, a total of 191 potential cases were reported to the NYSDOH. Of 95 patients with confirmed MIS-C (laboratory-confirmed acute or recent severe acute respiratory syndrome coronavirus 2 [SARS-CoV-2] infection) and 4 with suspected MIS-C (met clinical and epidemiologic criteria), 53 (54%) were male; 31 of 78 (40%) were black, and 31 of 85 (36%) were Hispanic. A total of 31 patients (31%) were 0 to 5 years of age, 42 (42%) were 6 to 12 years of age, and 26 (26%) were 13 to 20 years of age. All presented with subjective fever or chills; 97% had tachycardia, 80% had gastrointestinal symptoms, 60% had rash, 56% had conjunctival injection, and 27% had mucosal changes. Elevated levels of C-reactive protein, d-dimer, and troponin were found in 100%, 91%, and 71% of the patients, respectively; 62% received vasopressor support, 53% had evidence of myocarditis, 80% were admitted to an intensive care unit, and 2 died. The median length of hospital stay was 6 days. Conclusions The emergence of multisystem inflammatory syndrome in children in New York State coincided with widespread SARS-CoV-2 transmission; this hyperinflammatory syndrome with dermatologic, mucocutaneous, and gastrointestinal manifestations was associated with cardiac dysfunction.
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- 2020
8. Zika Virus–Associated Guillain-Barré Syndrome in a Returning US Traveler
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Anna Nolan, Daniel M. Pastula, Jeffrey Manko, Sunita Parajuli, Arthur L. Caplan, Matthew Sanger, Vivek Murthy, Sophia Kwon, George Crowley, Gregory D. Lee, Perrin Pleninger, Elizabeth Dufort, and Jason Beattie
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Microbiology (medical) ,Pediatrics ,medicine.medical_specialty ,Guillain-Barre syndrome ,biology ,business.industry ,Optimal treatment ,Case presentation ,Limiting ,medicine.disease ,biology.organism_classification ,Rash ,Article ,Zika virus ,03 medical and health sciences ,0302 clinical medicine ,Infectious Diseases ,medicine ,ZikV Infection ,030212 general & internal medicine ,medicine.symptom ,business ,Polyneuropathy ,030217 neurology & neurosurgery - Abstract
Zika virus (ZIKV) infection has been associated with Guillain-Barré Syndrome (GBS). Roughly 60% of people in countries such as the U.S. live in areas at risk for seasonal spread of ZIKV. ZIKV belongs to a class of diseases that is not typically seen in hospital settings across the U.S. and Europe. We describe the case presentation, management, and treatment of ZIKV infection complicated by GBS. A 64-year-old woman with recent travel to the Dominican Republic presented with rash followed by an acute, ascending polyneuropathy consistent with GBS. She was confirmed to have an acute ZIKV infection by detection of ZIKV nucleic acid by reverse transcription-polymerase chain reaction. She met Brighton Collaboration criteria level 1 evidence for GBS. She received two courses of intravenous immunoglobulin and slowly improved, though still had weakness at discharge. More research is needed to identify the pathophysiology behind ZIKV-associated GBS and its optimal treatment. Prevention is fundamental to limiting infection and spread of ZIKV.
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- 2018
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9. 1712. Epidemiology, Clinical Characteristics, and Outcomes of Influenza-Associated Hospitalizations in Children in the post-2009 Pandemic Era
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Helen Talbot, Melissa Sutton, Ruth Lynfield, Chelsea McMullen, Kim Yousey-Hindes, Shikha Garg, Laurie M Billing, Elizabeth Dufort, Maya Monroe, Keegan McCaffrey, Sue Kim, Rachel Herlihy, Kyle P Openo, Satoshi Kamidani, Angela P Campbell, Shua Chai, Evan J. Anderson, and Charisse N Cummings
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Mechanical ventilation ,medicine.medical_specialty ,business.industry ,Medical record ,medicine.medical_treatment ,medicine.disease ,Intensive care unit ,law.invention ,Pneumonia ,Infectious Diseases ,AcademicSubjects/MED00290 ,Oncology ,law ,Epidemiology ,Hospital admission ,Pandemic ,Emergency medicine ,Poster Abstracts ,medicine ,Medical history ,business - Abstract
Background Significant changes in influenza vaccination coverage and antiviral treatment guidance occurred following the 2009 influenza pandemic in children. However, data are limited describing recent epidemiology, clinical characteristics, antiviral use, vaccine coverage, and outcomes of influenza-related hospitalizations in children. Methods Children < 18 years hospitalized with influenza during seasons 2010–2011 through 2018–2019 were included through the US Influenza Hospitalization Surveillance Network (FluSurv-NET). Age-stratified hospitalization rates were calculated using the number of catchment-area residents with laboratory-confirmed influenza within 14 days prior to or ≤3 days after hospital admission during October 1-April 30 of each influenza season. Data on underlying medical history, influenza vaccination, antiviral use, and outcomes were abstracted from medical records using standard case report forms by trained surveillance officers. Results Over 9 seasons, 13,235 children were identified. Stepwise decreases in unadjusted hospitalization rates with age occurred, with the highest rates in infants < 6 months (ranging 56–184 per 100,000 persons) (Fig.1). Among these children, 56% were male, 34% were non-Hispanic White, 55% had a preexisting medical condition, and 8% were immunocompromised (Table 1). Use of antiviral treatment substantially increased from 56% to 85%, and influenza vaccination rates among hospitalized children increased from 34% to 43% over time. Regarding severe outcomes, 2,676 (20%) were admitted to ICU, 2,262 (17%) had pneumonia, 690 (5%) required mechanical ventilation, and 72 (0.5%) died. In univariable analysis, compared to hospitalized infants < 6 months, children >13 years had higher odds of ICU admission (odds ratio (OR), 2.0; 95% CI, 1.7–2.4), mechanical ventilation (OR, 1.7; 95% CI, 1.2–2.3), and pneumonia (OR, 2.6; 95% CI, 2.1–3.3) (Table 2). Figure 1 Table 1 Table 2 Conclusion Although influenza-related hospitalization rates decreased with increasing age, severe outcomes were more common among hospitalized older children. Room for improvement exists in influenza vaccination coverage and antiviral use. While 20% of children were admitted to ICU, death was uncommon. Disclosures Sue Kim, MPH, Council of State and Territorial Epidemiologists (CSTE) (Grant/Research Support) Melissa Sutton, MD, MPH, CDC funding (Emerging Infections Program) (Grant/Research Support) Evan J. Anderson, MD, Sanofi Pasteur (Scientific Research Study Investigator)
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- 2020
10. Laboratory Analysis of an Outbreak of Candida auris in New York from 2016 to 2018: Impact and Lessons Learned
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Alexandra Clarke, Richard Erazo, Valerie B. Haley, Eleanor Adams, Belinda Ostrowsky, YanChun Zhu, Marian Bates, Sudha Chaturvedi, Emily Lutterloh, Ronald J. Limberger, Brittany O’Brien, Karen Southwick, Monica Quinn, Elizabeth Dufort, Vishnu Chaturvedi, Coralie Bucher, Lynn Leach, and Debra Blog
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Microbiology (medical) ,medicine.medical_specialty ,Antifungal Agents ,Asia ,New York ,Drug resistance ,Microbial Sensitivity Tests ,Flucytosine ,Disease Outbreaks ,Amphotericin B ,Internal medicine ,Acute care ,medicine ,Humans ,Genotyping ,Candida ,Voriconazole ,business.industry ,Incidence (epidemiology) ,Candidiasis ,Outbreak ,Candida auris ,Commentary ,business ,Laboratories ,Fluconazole ,medicine.drug - Abstract
Candida auris is a multidrug-resistant yeast which has emerged in healthcare facilities worldwide, however little is known about identification methods, patient colonization, spread, environmental survival, and drug resistance. Colonization on both biotic and abiotic surfaces, along with travel, appear to be the major factors for the spread of this pathogen across the globe. In this investigation, we present laboratory findings from an ongoing C. auris outbreak in NY from August 2016 through 2018. A total of 540 clinical isolates, 11,035 patient surveillance specimens, and 3,672 environmental surveillance samples were analyzed. Laboratory methods included matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for yeast isolate identification, real-time PCR for rapid surveillance sample screening, culture on selective/non-selective media for recovery of C. auris and other yeasts from surveillance samples, antifungal susceptibility testing to determine the C. auris resistance profile, and Sanger sequencing of ribosomal genes for C. auris genotyping. Results included: a) identification and confirmation of C. auris in 413 clinical isolates and 931 patient surveillance isolates, as well as identification of 277 clinical cases and 350 colonized cases from 151 healthcare facilities including 59 hospitals, 92 nursing homes, 1 long-term acute care hospital (LTACH), and 2 hospices, b) successful utilization of an in-house developed C. auris real-time PCR assay for the rapid screening of patient and environmental surveillance samples, c) demonstration of relatively heavier colonization of C. auris in nares compared to the axilla/groin, and d) predominance of the South Asia Clade I with intrinsic resistance to fluconazole and elevated minimum inhibitory concentration (MIC) to voriconazole (81%), amphotericin B (61%), 5-FC (3%) and echinocandins (1%). These findings reflect greater regional prevalence and incidence of C. auris and the deployment of better detection tools in an unprecedented outbreak.
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- 2019
11. Bacterial and Fungal Infections in Persons Who Inject Drugs - Western New York, 2017
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Runa H Gokhale, Anthony E. Fiore, Ana C Bardossy, Chris A. Van Beneden, Michael Mendoza, Ghinwa Dumyati, Michele K. Bohm, Elizabeth Dufort, Isaac See, Kelly A. Jackson, Robert McDonald, Olivia L McGovern, John T. Brooks, Christina B Felsen, Alice Asher, Shelley S. Magill, Ian Kracalik, Debra Blog, Todd Lucas, and Kathleen P. Hartnett
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Adult ,Male ,medicine.medical_specialty ,Health (social science) ,Adolescent ,Epidemiology ,Health, Toxicology and Mutagenesis ,media_common.quotation_subject ,New York ,medicine.disease_cause ,01 natural sciences ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Health Information Management ,Hygiene ,Internal medicine ,medicine ,Humans ,030212 general & internal medicine ,Full Report ,0101 mathematics ,Substance Abuse, Intravenous ,media_common ,Aged ,business.industry ,Public health ,010102 general mathematics ,Opioid use disorder ,General Medicine ,Emergency department ,Bacterial Infections ,Middle Aged ,medicine.disease ,Substance abuse ,Mycoses ,Staphylococcus aureus ,Population Surveillance ,Female ,business ,Methadone ,medicine.drug ,Buprenorphine - Abstract
During 2014-2017, CDC Emerging Infections Program surveillance data reported that the occurrence of invasive methicillin-resistant Staphylococcus aureus (MRSA) infections associated with injection drug use doubled among persons aged 18-49 years residing in Monroe County in western New York.* Unpublished surveillance data also indicate that an increasing proportion of all Candida spp. bloodstream infections in Monroe County and invasive group A Streptococcus (GAS) infections in 15 New York counties are also occurring among persons who inject drugs. In addition, across six surveillance sites nationwide, the proportion of invasive MRSA infections that occurred in persons who inject drugs increased from 4.1% of invasive MRSA cases in 2011 to 9.2% in 2016 (1). To better understand the types and frequency of these infections and identify prevention opportunities, CDC and public health partners conducted a rapid assessment of bacterial and fungal infections among persons who inject drugs in western New York. The goals were to assess which bacterial and fungal pathogens most often cause infections in persons who inject drugs, what proportion of persons who inject use opioids, and of these, how many were offered medication-assisted treatment for opioid use disorder. Medication-assisted treatment, which includes use of medications such as buprenorphine, methadone, and naltrexone, reduces cravings and has been reported to lower the risk for overdose death and all-cause mortality in persons who use opioids (2,3). In this assessment, nearly all persons with infections who injected drugs used opioids (97%), but half of inpatients (22 of 44) and 12 of 13 patients seen only in the emergency department (ED) were not offered medication-assisted treatment. The most commonly identified pathogen was S. aureus (80%), which is frequently found on skin. Health care visits for bacterial and fungal infections associated with injection opioid use are an opportunity to treat the underlying opioid use disorder with medication-assisted treatment. Routine care for patients who continue to inject should include advice on hand hygiene and not injecting into skin that has not been cleaned or to use any equipment contaminated by reuse, saliva, soil, or water (4,5).
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- 2019
12. Vital Signs: Epidemiology of Sepsis: Prevalence of Health Care Factors and Opportunities for Prevention
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Lacey Avery, Raymund Dantes, Shannon A. Novosad, John A. Jernigan, Elizabeth Dufort, Shelley S. Magill, Jason G Lake, Debra Blog, Cheri Grigg, Mathew R. P. Sapiano, Shelley M. Zansky, Misha Robyn, Kathryn Wiedeman, Anthony E. Fiore, Lauren Epstein, Ghinwa Dumyati, and Christina B Felsen
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Adult ,Male ,0301 basic medicine ,medicine.medical_specialty ,Chronic condition ,Health (social science) ,Adolescent ,Epidemiology ,Health, Toxicology and Mutagenesis ,New York ,Vital signs ,Medical Records ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,Health Information Management ,Risk Factors ,medicine ,Humans ,Infection control ,030212 general & internal medicine ,Child ,Intensive care medicine ,Aged ,Retrospective Studies ,Aged, 80 and over ,Septic shock ,business.industry ,Medical record ,Infant, Newborn ,Infant ,General Medicine ,Middle Aged ,medicine.disease ,Hospitals ,Pneumonia ,030104 developmental biology ,Child, Preschool ,Female ,business - Abstract
BACKGROUND Sepsis is a serious and often fatal clinical syndrome, resulting from infection. Information on patient demographics, risk factors, and infections leading to sepsis is needed to integrate comprehensive sepsis prevention, early recognition, and treatment strategies. METHODS To describe characteristics of patients with sepsis, CDC and partners conducted a retrospective chart review in four New York hospitals. Random samples of medical records from adult and pediatric patients with administrative codes for severe sepsis or septic shock were reviewed. RESULTS Medical records of 246 adults and 79 children (aged birth to 17 years) were reviewed. Overall, 72% of patients had a health care factor during the 30 days before sepsis admission or a selected chronic condition likely to require frequent medical care. Pneumonia was the most common infection leading to sepsis. The most common pathogens isolated from blood cultures were Escherichia coli in adults aged ≥18 years, Klebsiella spp. in children aged ≥1 year, and Enterococcus spp. in infants aged
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- 2016
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13. Association of Treatment With Hydroxychloroquine or Azithromycin With In-Hospital Mortality in Patients With COVID-19 in New York State
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Elizabeth Dufort, James M. Tesoriero, Jack DeHovitz, Brad Hutton, Tomoko Udo, Larissa A. Wilberschied, Howard A. Zucker, Alison Muse, David R. Holtgrave, Jessica Kumar, James N Kirkwood, Eli S. Rosenberg, Patti Weinberg, and Debra Blog
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medicine.medical_specialty ,Proportional hazards model ,business.industry ,010102 general mathematics ,Hydroxychloroquine ,Retrospective cohort study ,General Medicine ,Azithromycin ,01 natural sciences ,QT interval ,03 medical and health sciences ,0302 clinical medicine ,Pharmacotherapy ,Internal medicine ,medicine ,030212 general & internal medicine ,0101 mathematics ,Adverse effect ,business ,Original Investigation ,Cohort study ,medicine.drug - Abstract
Importance Hydroxychloroquine, with or without azithromycin, has been considered as a possible therapeutic agent for patients with coronavirus disease 2019 (COVID-19). However, there are limited data on efficacy and associated adverse events. Objective To describe the association between use of hydroxychloroquine, with or without azithromycin, and clinical outcomes among hospital inpatients diagnosed with COVID-19. Design, Setting, and Participants Retrospective multicenter cohort study of patients from a random sample of all admitted patients with laboratory-confirmed COVID-19 in 25 hospitals, representing 88.2% of patients with COVID-19 in the New York metropolitan region. Eligible patients were admitted for at least 24 hours between March 15 and 28, 2020. Medications, preexisting conditions, clinical measures on admission, outcomes, and adverse events were abstracted from medical records. The date of final follow-up was April 24, 2020. Exposures Receipt of both hydroxychloroquine and azithromycin, hydroxychloroquine alone, azithromycin alone, or neither. Main Outcomes and Measures Primary outcome was in-hospital mortality. Secondary outcomes were cardiac arrest and abnormal electrocardiogram findings (arrhythmia or QT prolongation). Results Among 1438 hospitalized patients with a diagnosis of COVID-19 (858 [59.7%] male, median age, 63 years), those receiving hydroxychloroquine, azithromycin, or both were more likely than those not receiving either drug to have diabetes, respiratory rate >22/min, abnormal chest imaging findings, O2saturation lower than 90%, and aspartate aminotransferase greater than 40 U/L. Overall in-hospital mortality was 20.3% (95% CI, 18.2%-22.4%). The probability of death for patients receiving hydroxychloroquine + azithromycin was 189/735 (25.7% [95% CI, 22.3%-28.9%]), hydroxychloroquine alone, 54/271 (19.9% [95% CI, 15.2%-24.7%]), azithromycin alone, 21/211 (10.0% [95% CI, 5.9%-14.0%]), and neither drug, 28/221 (12.7% [95% CI, 8.3%-17.1%]). In adjusted Cox proportional hazards models, compared with patients receiving neither drug, there were no significant differences in mortality for patients receiving hydroxychloroquine + azithromycin (HR, 1.35 [95% CI, 0.76-2.40]), hydroxychloroquine alone (HR, 1.08 [95% CI, 0.63-1.85]), or azithromycin alone (HR, 0.56 [95% CI, 0.26-1.21]). In logistic models, compared with patients receiving neither drug cardiac arrest was significantly more likely in patients receiving hydroxychloroquine + azithromycin (adjusted OR, 2.13 [95% CI, 1.12-4.05]), but not hydroxychloroquine alone (adjusted OR, 1.91 [95% CI, 0.96-3.81]) or azithromycin alone (adjusted OR, 0.64 [95% CI, 0.27-1.56]), . In adjusted logistic regression models, there were no significant differences in the relative likelihood of abnormal electrocardiogram findings. Conclusions and Relevance Among patients hospitalized in metropolitan New York with COVID-19, treatment with hydroxychloroquine, azithromycin, or both, compared with neither treatment, was not significantly associated with differences in in-hospital mortality. However, the interpretation of these findings may be limited by the observational design.
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- 2020
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14. Respiratory and Nonrespiratory Diagnoses Associated With Influenza in Hospitalized Adults
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Alissa O’Halloran, Laurie M Billing, Ruth Lynfield, Elizabeth Dufort, Melissa A Rolfes, Evan J. Anderson, Carrie Reed, Andrea George, Patricia Ryan, Nisha B Alden, Lourdes Irizarry, Shikha Garg, Nancy M. Bennett, William Schaffner, Kimberly Yousey-Hindes, Sue Kim, Eric J. Chow, H. Keipp Talbot, Pam Daily Kirley, and Ann Thomas
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Adult ,Male ,medicine.medical_specialty ,Cross-sectional study ,Population ,Orthomyxoviridae ,030204 cardiovascular system & hematology ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,Interquartile range ,Internal medicine ,Influenza, Human ,Humans ,Medicine ,030212 general & internal medicine ,education ,Respiratory Tract Infections ,Original Investigation ,Aged ,Aged, 80 and over ,education.field_of_study ,biology ,business.industry ,Viral culture ,Research ,Medical record ,General Medicine ,Middle Aged ,medicine.disease ,biology.organism_classification ,United States ,3. Good health ,Hospitalization ,Online Only ,Pneumonia ,Infectious Diseases ,Cross-Sectional Studies ,Population Surveillance ,Acute Disease ,Female ,business - Abstract
This cross-sectional study examines the respiratory and nonrespiratory diagnoses reported for US adults hospitalized with laboratory-confirmed influenza between 2010 and 2018., Key Points Question Which types of respiratory and nonrespiratory diagnoses were associated with influenza in hospitalized adult patients since the 2009 influenza pandemic? Findings In this cross-sectional analysis of more than 80 000 adults hospitalized with laboratory-confirmed influenza between 2010 and 2018 in the United States, 95% of patients had a respiratory diagnosis, and 46% had a nonrespiratory diagnosis, including 5% with exclusively nonrespiratory diagnoses. Meaning Influenza virus infection may be associated with both respiratory and nonrespiratory diagnoses, highlighting the broad scope of influenza burden of disease., Importance Seasonal influenza virus infection is a major cause of morbidity and mortality and may be associated with respiratory and nonrespiratory diagnoses. Objective To examine the respiratory and nonrespiratory diagnoses reported for adults hospitalized with laboratory-confirmed influenza between 2010 and 2018 in the United States. Design, Setting, and Participants This cross-sectional study used data from the US Influenza Hospitalization Surveillance Network (FluSurv-NET) from October 1 through April 30 of the 2010-2011 through 2017-2018 influenza seasons. FluSurv-NET is a population-based, multicenter surveillance network with a catchment area that represents approximately 9% of the US population. Patients are identified by practitioner-ordered influenza testing. Adults (aged ≥18 years) hospitalized with laboratory-confirmed influenza were included in the study. Exposures FluSurv-NET defines laboratory-confirmed influenza as a positive influenza test result by rapid antigen assay, reverse transcription–polymerase chain reaction, direct or indirect fluorescent staining, or viral culture. Main Outcomes and Measures Acute respiratory or nonrespiratory diagnoses were defined using International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM) and International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10) discharge diagnosis codes. The analysis included calculation of the frequency of acute respiratory and nonrespiratory diagnoses with a descriptive analysis of patient demographic characteristics, underlying medical conditions, and in-hospital outcomes by respiratory and nonrespiratory diagnoses. Results Of 89 999 adult patients hospitalized with laboratory-confirmed influenza, 76 649 (median age, 69 years; interquartile range, 55-82 years; 55% female) had full medical record abstraction and at least 1 ICD code for an acute diagnosis. In this study, 94.9% of patients had a respiratory diagnosis and 46.5% had a nonrespiratory diagnosis, including 5.1% with only nonrespiratory diagnoses. Pneumonia (36.3%), sepsis (23.3%), and acute kidney injury (20.2%) were the most common acute diagnoses. Fewer patients with only nonrespiratory diagnoses received antiviral therapy for influenza compared with those with respiratory diagnoses (81.4% vs 88.9%; P
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- 2020
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15. 2741. Seasonal Influenza Vaccine Timing in Children and Adults Hospitalized with Influenza in the United States, FluSurv-NET, 2013–2017
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Julia C Haston, Kim Yousey-Hindes, Sue Kim, Evan J. Anderson, Jill M. Ferdinands, Laurie M Billing, Maya Monroe, Elizabeth Dufort, Alissa O’Halloran, Charisse N Cummings, Kyle P Openo, Angela P Campbell, Shikha Garg, Emily Fawcett, Lourdes Irizarry, Nancy M. Bennett, Keipp Talbot, Melanie Spencer, Melissa McMahon, Pam Daily Kirley, Ann Thomas, Monica M. Farley, and Samantha Stephens
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Seasonal influenza ,Abstracts ,Infectious Diseases ,Oncology ,business.industry ,Poster Abstracts ,Medicine ,business ,Demography - Abstract
Background Seasonal influenza vaccine may attenuate disease severity among people infected with influenza despite vaccination, but vaccine effectiveness may decrease with increasing time between vaccination and infection. Patient characteristics may play a role in the timing of vaccine receipt. Methods We used data from the Influenza Hospitalization Surveillance Network (FluSurv-NET) and included patients ≥ 9 years hospitalized with laboratory-confirmed influenza during October 1–April 30 of influenza seasons 2013–2014 through 2016–2017 who received seasonal influenza vaccine ≥ 14 days prior to admission. Vaccine history was obtained from vaccine registries, medical charts, and patient interviews. We defined “early vaccination” as vaccine receipt before October 15 and “late vaccination” as receipt after (date selected using typical season onset and median vaccination dates). Early and late groups were compared using Chi-square or Fisher exact tests. Results Among 21,751 vaccinated patients, 61% received vaccine before October 15, and distribution of vaccination date was similar across seasons (figure). Vaccination occurred earlier with increasing age (45% were vaccinated early among those 9–17 years but 65% in those ≥ 80 years, P < 0.01). White non-Hispanic patients were more likely to receive vaccine early compared with black non-Hispanic and Hispanic patients (63% vs. 55% and 54%; P < 0.01). Those with metabolic disorders, cardiovascular disease, kidney disease, and cancer were vaccinated earlier whereas those with HIV and liver disease were vaccinated later. Vaccine timing also varied by state (P < 0.01) but not by sex. Conclusion Among influenza-vaccinated older children and adults hospitalized with influenza, older age, white race, and certain medical conditions were associated with early receipt of influenza vaccination in unadjusted analysis. This may be due to frequent healthcare encounters and targeted public health strategies in high-risk groups. Understanding how timing of vaccine receipt varies among populations can provide insights into variables that must be controlled for in studying possible vaccine effectiveness waning and attenuation of disease among those who are infected despite vaccination. Disclosures All authors: No reported disclosures.
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- 2019
16. 1621. Acute Cardiovascular Events Among Adults Hospitalized with Influenza, FluSurv-NET, 2010–2018
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Kim Yousey-Hindes, Nancy M. Bennett, Samantha Stephens, Carrie Reed, Maya Monroe, Keipp Talbot, Laurie M Billing, Melissa A Rolfes, Lourdes Irizarry, Ilene Risk, Elizabeth Dufort, Evan J. Anderson, Shua Chai, Alissa O’Halloran, Ruth Lynfield, Shikha Garg, Sue Kim, Eric J. Chow, and Ann Thomas
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medicine.medical_specialty ,Abstracts ,Infectious Diseases ,Oncology ,business.industry ,Emergency medicine ,Poster Abstracts ,medicine ,business - Abstract
Background Influenza virus infection most commonly causes acute respiratory tract illness, however may also lead to non-respiratory complications including acute cardiovascular (CV) events. We describe the frequency of and risk factors for acute CV events in adults hospitalized with influenza in the United States. Methods We included adults aged > 18 years hospitalized during influenza seasons 2010–2011 through 2017–2018 in FluSurv-NET, a multi-state population-based surveillance system that includes detailed medical chart review of patients hospitalized with laboratory-confirmed influenza. We defined acute CV events by International Classification of Diseases (ICD) primary and secondary discharge diagnosis codes for acute heart failure (aHF), acute ischemic heart disease (aIHD), hypertensive crisis, cardiogenic shock, acute myocarditis, acute pericarditis and cardiac tamponade. We calculated the frequency of acute CV events and used multivariable logistic regression among the 87% treated with influenza antivirals to identify independent factors associated with aHF and aIHD, the two most common diagnoses. Results Of 80,374 adults hospitalized with laboratory-confirmed influenza, 12% had > 1 acute CV event. We found that aHF (46%) and aIHD (42%) were the most common, followed by hypertensive crisis (8%), cardiogenic shock (3%), acute myocarditis (0.7%), acute pericarditis (0.4%) and cardiac tamponade (0.2%). Compared with treated patients without an acute cardiovascular event, treated patients with aHF (Figure A) and aIHD (Figure B) were more likely to be older, currently/formerly use tobacco and have underlying conditions including cardiovascular disease, diabetes mellitus, and kidney disease. Conclusion Among adults hospitalized with laboratory-confirmed influenza, acute CV events are common, particularly among those with prior cardiovascular disease. During the influenza season, clinicians should consider influenza virus infection in hospitalized adults who present with acute CV events. Non-respiratory complications, specifically aHF and aIHD, may be an under-recognized contributor to the burden of influenza. Disclosures All authors: No reported disclosures.
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- 2019
17. Pre-Zika Microcephaly in Brazil: Closer to the Elusive Baseline and New Questions Raised
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Elizabeth Dufort and Jennifer L. White
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medicine.medical_specialty ,Microcephaly ,Zika virus ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,030225 pediatrics ,Epidemiology ,Prevalence ,medicine ,Humans ,030212 general & internal medicine ,Baseline (configuration management) ,biology ,Zika Virus Infection ,business.industry ,Incidence (epidemiology) ,Infant, Newborn ,biology.organism_classification ,medicine.disease ,Family medicine ,Pediatrics, Perinatology and Child Health ,Epidemiological surveillance ,business ,Brazil - Abstract
As the world learned of the emerging Zika virus outbreak in Brazil in 2015 and of the astutely identified association with microcephaly, questions quickly arose regarding the dramatic increase in reported microcephaly and the level of risk to pregnant women. There were 2 overarching questions at that time: how large was the increase in the incidence of microcephaly in Brazil, and how much of it could be attributed to Zika virus? Appropriate concern regarding this new association abounded, along with questions regarding whether increased awareness may have led to increased reporting. Initial assessments were further compounded by comparison with a pre-Zika baseline that relied on a passive surveillance system with likely significant underreporting.1,2 Further complicating the situation was the lack of an internationally accepted, standardized approach to the measurement and definition of microcephaly, making comparisons of rates across regions and time periods difficult. Although several advances in the response to Zika virus required the use of cutting-edge technologies (eg, diagnostic advances, vaccine development), these urgent, first, and overarching questions that arose during the Zika virus … Address correspondence to Elizabeth Dufort, MD, Division of Epidemiology, New York State Department of Health, Corning Tower Room 503, Empire State Plaza, Albany, NY 12237. E-mail: elizabeth.dufort{at}health.ny.gov
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- 2018
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18. 384. Findings From a Candida auris Admission Screening Pilot in New York State
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Elizabeth Dufort, Monica Quinn, Sudha Chaturvedi, Richard Erazo, Emily Lutterloh, Coralie Bucher, Debra Blog, Robert McDonald, Carolyn Stover, Eleanor Adams, Jiankun Kuang, Snigdha Vallabhaneni, and Valerie B. Haley
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Mycology culture ,medicine.medical_specialty ,business.industry ,Intensive care unit ,law.invention ,Infectious disease prevention / control ,Abstracts ,Infectious Diseases ,B. Poster Abstracts ,Oncology ,Candida auris ,law ,Emergency medicine ,medicine ,Microbial colonization ,Admission screening ,business ,Nursing homes - Abstract
Background Candida auris is an emerging multidrug-resistant yeast which can spread within healthcare facilities and is associated with significant morbidity. Over 160 clinical cases have been reported in NYS. This pilot aims to assess the feasibility of C. auris admission screening and to better understand its role in controlling spread of C. auris in an area where it has emerged. Methods One hospital and two nursing homes (NHs) with known prior cases participated (one NH and hospital are closely associated and are reported together). Patients were screened on admission to any of three hospital intensive care units (medical, cardiac, pulmonary) or to a ventilator unit in the NHs from November 2017 to April 2018. Screening consisted of bilateral nares and axilla/groin swabs sent to the NYS Department of Health Wadsworth Center (WC) for a WC-developed C. auris real-time polymerase chain reaction (rt-PCR) test. Specimens with detection of C. auris on rt-PCR underwent fungal culture. Facilities were alerted of positive results and infection control precautions were promptly initiated. Results To date, 575 patients (1,371 samples) were screened. Of patients not previously known to be colonized, 39 had C. auris detected on rt-PCR; 34 confirmed by C. auris culture at either site and one culture pending. Of these, 30 (88%) were detected and confirmed from the axilla/groin specimen (Figure 1). Mean age was 76 years and 59% were females. Patients had significant healthcare facility exposure (Figure 2). Eleven (32%) were from NH-A and 23 (68%) from the hospital/NH-B combined. Rates of positivity were 16.2% (11/68) for NH-A and 4.6% (23/498) for the hospital/NH-B. Conclusion C. auris rt-PCR is a useful tool within an admission screening program; however, more accessible and affordable rapid laboratory diagnostics are urgently needed. The axilla/groin site detected the majority of colonized individuals. Admission screening was feasible and increased facility knowledge of colonization status, which led to earlier implementation of infection control precautions potentially limiting spread. However, further study is needed to assess transmission dynamics and potential impact of admission screening on control of C. auris within an outbreak or endemic setting. Figure 1. Figure 2. Disclosures All authors: No reported disclosures.
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- 2018
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19. LB16. The Role of Adults in the Measles Outbreak in New York State Outside of New York City, 2018–2019
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Ada J Huang, Maria Souto, Irina Gelman, Nina Ahmad, Brad Hutton, Howard A. Zucker, Robert McDonald, Jamie N. Sommer, Debra Blog, Nancy A. McGraw, Karen Southwick, Kevin T McKay, Manisha Patel, Kirsten St. George, Eleanor Adams, Elizabeth Dufort, Patricia Schnabel Ruppert, Toby R Levin, Dina Hoefer, Stephanie Ostrowski, Patrick Bryant, Dylan E. Johns, Elizabeth Rausch-Phung, Vanessa J. Landis, Rachel E Wester, Paul A. Gastañaduy, and Lissette X. McNulty
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Pediatrics ,medicine.medical_specialty ,Measles-Mumps-Rubella Vaccine ,business.industry ,Late Breaker Abstracts ,Measles outbreak ,medicine.disease ,Measles ,Single dose regimen ,Vaccination ,Abstracts ,Infectious Diseases ,Oncology ,medicine ,Measles vaccine ,business ,Disease transmission - Abstract
Background The United States is experiencing the largest measles outbreak since elimination was declared in 2000, with the majority of cases in NYS reported in undervaccinated communities. The objective of this evaluation was to describe adult measles cases in the NYS measles outbreak outside of New York City (NYC). Methods We included all confirmed cases aged ≥18 years in NYS residents (excluding NYC) during October 1, 2018–July 25, 2019 that met the CSTE measles case definition. We defined measles cases attributable to adults as the sum of measles cases among adults and children who contracted disease directly from adults. Results Among 371 confirmed measles cases, the median age was 5.5 years (range: 1 day to 64 years); 79 (21%) were in adults, 4 (5%) of whom were born before 1957 (3 unvaccinated and 1 with unknown vaccine status). Among the 75 cases born during or after 1957, 65 (87%) were unvaccinated or had unknown vaccine status, while 3 had one dose and 7 had 2 doses of measles vaccine. Notably, 5 of 11 internationally imported measles cases were adults, and all were unvaccinated or had unknown vaccine status. During the first month of the outbreak, 26 of the 51 (51%) cases were attributable to adults; of the 26, 15 (58%) were in adults and 11 (42%) were in children who acquired infection from adults (Figure 3). Conclusion The majority of measles cases occurred in unvaccinated children emphasizing the importance of ongoing and focused efforts on pediatric vaccination. However, measles cases in unvaccinated adults played an important role in both importations and disease transmission early in the outbreak. These data strongly support current recommendations of 1 dose of measles, mumps, rubella vaccine (MMR) for most adults and 2 doses of MMR for adults traveling internationally and at high-risk such as those in outbreak areas, as determined by local/state public health. Disclosures Kirsten St. George, MAppSc, PhD, Akonni Biosystems (Other Financial or Material Support), ThermoFisher (Grant/Research Support), Zeptometrix (Other Financial or Material Support, royalty generating collaborative agreement). .
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- 2019
20. 1890. Missed Clinical Opportunities to Prevent Infections and Treat Substance Use Disorder (SUD) in People Who Inject Drugs (PWID)
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Anthony E. Fiore, Ana C Bardossy, Sabrina R Williams, Ghinwa Dumyati, Runa H Gokhale, Shelley S. Magill, Kathleen P. Hartnett, Ian Kracalik, Isaac See, Christina B Felsen, Alice Asher, Robert McDonald, Todd Lucas, Debra Blog, Elizabeth Dufort, John T. Brooks, Chris A. Van Beneden, Snigdha Vallabhaneni, Olivia L McGovern, Kelly M Hatfield, Michele K. Bohm, Michael Mendoza, and Kelly A. Jackson
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medicine.medical_specialty ,business.industry ,Medical record ,medicine.disease ,medicine.disease_cause ,Pathogenic organism ,Substance abuse ,Abstracts ,Infectious Diseases ,Oncology ,Oral Abstracts ,Staphylococcus aureus ,Hospital admission ,Streptococcus pyogenes ,medicine ,Intensive care medicine ,business ,Opioid intoxication - Abstract
Background The age-adjusted rate of drug overdose deaths in the United States tripled from 1999 to 2016. Public health surveillance data indicate that an increasing proportion of infections due to bacterial and fungal pathogens is associated with injection drug use (IDU). We describe healthcare encounters (HCEs) of PWID as potential opportunities to prevent infections related to IDU by identifying risks and treating SUD, including with medication-assisted treatment (MAT) for opioid use disorder. Methods At six hospitals in western New York, we abstracted medical records from hospital admissions and emergency department (ED) visits for PWID (i.e., IDU in the preceding year) who had positive cultures for Staphylococcus aureus (any clinical specimen, April–July 2017), group A Streptococcus (invasive specimens, all of 2017) or Candida spp. (blood specimens, all of 2017). We reviewed hospital admission and ED records for 1 year preceding the positive culture to identify visits during which opportunities to prevent infection and treat SUD by addressing SUD and IDU were missed. Results We identified 99 PWID with positive cultures. The median age was 33 years (range 19–68) and 61 were female. Sixty-nine had a skin and soft-tissue infection, 44 had a bloodstream infection, and 20 had both. Thirty-one PWID left against medical advice during a hospital admission or an ED visit. Seventy-nine PWID were hospitalized, of whom 4 died. Ninety-five used opioids and 71 used cocaine in the preceding year. Seventy-five PWID had an HCE in the 12 months prior to the index visit, with a median of two HCE per person (interquartile range 1–4); 53 of PWID had a previous HCE for infection and 28 for opioid overdose. SUD was documented during a prior HCE at the same hospital for 61 PWID, but only 10 (16%) were offered MAT during any prior HCE and for 24 (39%) there was no documentation that any form of treatment for SUD was offered. Conclusion In this cohort, PWID frequently had one or more healthcare encounters documented at the same hospital in the year prior to a serious bacterial or fungal infection. These prior HCEs were often for infections or overdose that signaled the need for MAT, demonstrating that there are critical missed opportunities to identify risks, prevent infection, and treat SUD. Disclosures All Authors: No reported Disclosures.
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- 2019
21. Epidemiology of Invasive Early-Onset and Late-Onset Group B Streptococcal Disease in the United States, 2006 to 2015
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Monica M. Farley, Susan Petit, Mirasol Apostol, Chad Smelser, Lee H. Harrison, Nisha B Alden, Tracy Pondo, William Schaffner, Stephanie J. Schrag, Jennifer H. Jain, Bernard Beall, Kari Burzlaff, Ann Thomas, Ruth Lynfield, Nancy L Spina, Srinivas Nanduri, Paula Snippes Vagnone, Elizabeth Dufort, and Lesley McGee
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Male ,Pediatrics ,medicine.medical_specialty ,Population ,Late onset ,Disease ,Group B ,Streptococcus agalactiae ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,Streptococcal Infections ,030225 pediatrics ,Epidemiology ,Humans ,Medicine ,030212 general & internal medicine ,Age of Onset ,Antibiotic prophylaxis ,education ,Retrospective Studies ,education.field_of_study ,business.industry ,Incidence ,Incidence (epidemiology) ,Vaccination ,Infant, Newborn ,Infant ,Antibiotic Prophylaxis ,United States ,Population Surveillance ,Pediatrics, Perinatology and Child Health ,Female ,Age of onset ,business - Abstract
Invasive disease owing to group B Streptococcus (GBS) remains an important cause of illness and death among infants younger than 90 days in the United States, despite declines in early-onset disease (EOD; with onset at 0-6 days of life) that are attributed to intrapartum antibiotic prophylaxis (IAP). Maternal vaccines to prevent infant GBS disease are currently under development.To describe incidence rates, case characteristics, antimicrobial resistance, and serotype distribution of EOD and late-onset disease (LOD; with onset at 7-89 days of life) in the United States from 2006 to 2015 to inform IAP guidelines and vaccine development.This study used active population-based and laboratory-based surveillance for invasive GBS disease conducted through Active Bacterial Core surveillance in selected counties of 10 states across the United States. Residents of Active Bacterial Core surveillance areas who were younger than 90 days and had invasive GBS disease in 2006 to 2015 were included. Data were analyzed from December 2017 to April 2018.Group B Streptococcus isolated from a normally sterile site.Early-onset disease and LOD incidence rates and associated GBS serotypes and antimicrobial resistance.The Active Bacterial Core surveillance program identified 1277 cases of EOD and 1387 cases of LOD. From 2006 to 2015, EOD incidence declined significantly from 0.37 to 0.23 per 1000 live births (P .001), and LOD rates remained stable (mean, 0.31 per 1000 live births). Among the mothers of 1277 infants with EOD, 617 (48.3%) had no indications for IAP and did not receive it, and 278 (21.8%) failed to receive IAP despite having indications. Serotype data were available for 1743 of 1897 patients (91.3%) from 7 sites that collect GBS isolates. Among patients with EOD, serotypes Ia (242 [27.3%]) and III (242 [27.3%]) were most common. Among patients with LOD, serotype III was most common (481 [56.2%]), and this increased from 2006 to 2015 from 0.12 to 0.20 cases per 1000 live births (P .001). Serotype IV caused 53 cases (6.2%) of EOD and LOD combined. The 6 most common serotypes (Ia, Ib, II, III, IV, and V) caused 881 EOD cases (99.3%) and 853 LOD cases (99.7%). No β-lactam resistance was identified; 359 isolates (20.8%) tested showed constitutive clindamycin resistance. In 2015, an estimated 840 EOD cases and 1265 LOD cases occurred nationally.The rates of LOD among US infants are now higher than EOD rates. Combined with addressing IAP implementation gaps, an effective vaccine covering the most common serotypes might further reduce EOD rates and help prevent LOD, for which there is no current public health intervention.
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- 2019
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22. Zika Virus Testing Considerations: Lessons Learned from the First 80 Real-Time Reverse Transcription-PCR-Positive Cases Diagnosed in New York State
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Elizabeth Dufort, Ronald J. Limberger, Stephanie Ostrowski, Howard A. Zucker, Kirsten St. George, Debra Blog, Inderbir Sohi, Jamie N. Sommer, Jennifer L. White, P. Bryon Backenson, Susan J. Wong, Brad Hutton, Jill Taylor, Amy B. Dean, and Daniel Kuhles
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Microbiology (medical) ,Adult ,Male ,Serum ,medicine.medical_specialty ,Adolescent ,030231 tropical medicine ,New York ,Urine ,Real-Time Polymerase Chain Reaction ,Serology ,Zika virus ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Pregnancy ,Internal medicine ,Virology ,medicine ,Humans ,030212 general & internal medicine ,Young adult ,Child ,Aged ,biology ,Transmission (medicine) ,business.industry ,Reverse Transcriptase Polymerase Chain Reaction ,Zika Virus Infection ,Zika Virus ,Middle Aged ,medicine.disease ,biology.organism_classification ,Real-time polymerase chain reaction ,Female ,business ,Viral load - Abstract
The performance and interpretation of laboratory tests for Zika virus (ZKV) continue to be evaluated. Serology is cross-reactive, laborious, and frequently difficult to interpret, and serum was initially solely recommended for molecular diagnosis. ZKV testing was initiated in January 2016 in New York State for symptomatic patients, pregnant women, their infants, and patients with Guillain-Barré syndrome who had traveled to areas with ZKV transmission. Subsequently, eligibility was expanded to pregnant women with sexual partners with similar travel histories. Serum and urine collected within 4 weeks of symptom onset or within 6 weeks of travel were tested with real-time reverse transcription-PCR (RT-PCR) assays targeting the ZKV envelope and NS2B genes. In this review of lessons learned from the first 80 positive cases in NYS, ZKV RNA was detected in urine only in 50 patients, in serum only in 19 patients, and in both samples concurrently in 11 patients, with average viral loads in urine a log higher than those in serum. Among 93 positive samples from the 80 patients, 41 were positive on both gene assays, 52 were positive on the envelope only, and none were positive on the NS2B only. Of the 80 infected patients, test results for 74 (93%) would have defined their infection status as not detected or equivocal if the requirement for positive results from two assay targets (two-target-positive requirement) in the initial federal guidance to public health laboratories was enforced, if urine was not tested, or if the extended eligibility time for molecular testing was not implemented. These changes facilitated more extensive molecular diagnosis of ZKV, reducing reliance on time-consuming and potentially inconclusive serology.
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- 2017
23. Two Imported Cases of Congenital Rubella Syndrome and Infection-Control Challenges in New York State, 2013-2015
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Karen Southwick, Jane Greenko, Patrick W. Bryant, Emily Lutterloh, Philip Kurpiel, Deborah Vasquez, Elizabeth Dufort, Misha Robyn, Elizabeth Rausch-Phung, Kimberly J. Alvarez, Debra Blog, Cynthia Schulte, Kathryn Sen, Gale R. Burstein, Eleanor Adams, and Jennifer B. Rosen
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0301 basic medicine ,Male ,Pediatrics ,medicine.medical_specialty ,Yemen ,Rubella Syndrome, Congenital ,New York ,Rubella ,03 medical and health sciences ,0302 clinical medicine ,Foreign born ,Pregnancy ,otorhinolaryngologic diseases ,medicine ,Infection control ,Humans ,030212 general & internal medicine ,Pregnancy Complications, Infectious ,Congenital rubella syndrome ,business.industry ,Public health ,Infant, Newborn ,General Medicine ,medicine.disease ,030112 virology ,Infant newborn ,Infectious Disease Transmission, Vertical ,Infectious disease prevention / control ,Infectious Diseases ,Pediatrics, Perinatology and Child Health ,Female ,business ,Travel-Related Illness - Abstract
Rubella was declared eliminated in the United States in 2004. During 2013-2015, 2 infants with congenital rubella syndrome (CRS) were born in New York State. Both mothers were foreign born and traveled to Yemen during their pregnancy. Delayed consideration of CRS led to preventable exposures and a substantial public health response.
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- 2016
24. Prolonged Detection of Zika Virus RNA in Pregnant Women
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Sherif R. Zaki, Jorge L. Muñoz, Elizabeth Dufort, Margaret A. Honein, Alys Adamski, Kirsten St. George, Andrea M. Bingham, Amy B. Dean, Julu Bhatnagar, Christine K. Olson, Gilberto A. Santiago, Anna Likos, Margaret M Cortese, Sally Slavinski, Denise J. Jamieson, Susan L. Hills, Lea Heberlein-Larson, Ann M. Powers, Lauren Culver Barlow, Titilope Oduyebo, Lyle R. Petersen, Emily E. Petersen, Jennifer L. White, Kara N. D. Polen, Dana Meaney-Delman, Jennifer L. Rakeman, and Ellen H. Lee
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0301 basic medicine ,Zika virus disease ,Adult ,medicine.medical_specialty ,Microcephaly ,Time Factors ,Asymptomatic ,Zika virus ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Pregnancy ,Medicine ,Humans ,030212 general & internal medicine ,Young adult ,Pregnancy Complications, Infectious ,Asymptomatic Infections ,Fetus ,biology ,business.industry ,Obstetrics ,Zika Virus Infection ,Obstetrics and Gynecology ,Zika Virus ,medicine.disease ,biology.organism_classification ,Virology ,Fetal Diseases ,030104 developmental biology ,RNA, Viral ,Female ,medicine.symptom ,business ,Live birth ,Live Birth - Abstract
Objective Zika virus infection during pregnancy is a cause of microcephaly and other fetal brain abnormalities. Reports indicate that the duration of detectable viral RNA in serum after symptom onset is brief. In a recent case report involving a severely affected fetus, Zika virus RNA was detected in maternal serum 10 weeks after symptom onset, longer than the duration of RNA detection in serum previously reported. This report summarizes the clinical and laboratory characteristics of pregnant women with prolonged detection of Zika virus RNA in serum that were reported to the U.S. Zika Pregnancy Registry. Methods Data were obtained from the U.S. Zika Pregnancy Registry, an enhanced surveillance system of pregnant women with laboratory evidence of confirmed or possible Zika virus infection. For this case series, we defined prolonged detection of Zika virus RNA as Zika virus RNA detection in serum by real-time reverse transcription-polymerase chain reaction (RT-PCR) 14 or more days after symptom onset or, for women not reporting signs or symptoms consistent with Zika virus disease (asymptomatic), 21 or more days after last possible exposure to Zika virus. Results Prolonged Zika virus RNA detection in serum was identified in four symptomatic pregnant women up to 46 days after symptom onset and in one asymptomatic pregnant woman 53 days postexposure. Among the five pregnancies, one pregnancy had evidence of fetal Zika virus infection confirmed by histopathologic examination of fetal tissue, three pregnancies resulted in live births of apparently healthy neonates with no reported abnormalities, and one pregnancy is ongoing. Conclusion Zika virus RNA was detected in the serum of five pregnant women beyond the previously estimated timeframe. Additional real-time RT-PCR testing of pregnant women might provide more data about prolonged detection of Zika virus RNA and the possible diagnostic, epidemiologic, and clinical implications for pregnant women.
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- 2016
25. Cryptococcus gattii Genotype VGI Infection in New England
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Raina Phillips, John R. Perfect, Joseph Heitman, Elizabeth Dufort, Russell J. McCulloh, and Edmond J. Byrnes
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Microbiology (medical) ,Volunteered geographic information ,Antifungal Agents ,Adolescent ,Genotype ,Meningitis, Cryptococcal ,Communicable Diseases, Emerging ,Article ,Microbiology ,New england ,New England ,parasitic diseases ,Humans ,Cryptococcus gattii ,Lung Diseases, Fungal ,biology ,Brain ,bacterial infections and mycoses ,biology.organism_classification ,Magnetic Resonance Imaging ,Virology ,Infectious Diseases ,Tomography x ray computed ,Pediatrics, Perinatology and Child Health ,Emerging infectious disease ,Female ,Radiography, Thoracic ,Tomography, X-Ray Computed ,Cryptococcal meningitis ,Multilocus Sequence Typing - Abstract
Cryptococcus gattii is a known, emerging infectious disease pathogen predominantly in the Pacific Northwest, the United States, and British Columbia, Canada. We report a case of an immunocompetent adolescent from New England who had severe pulmonary and central nervous system infection caused by the VGI genotype of C. gattii.
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- 2011
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26. 746. Characteristics of Respiratory Syncytial Virus (RSV) Infection Among Hospitalized Adults, United States, 2014–2017
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Gayle E Langley, Elizabeth Dufort, Seth Eckel, Bryanna Cikesh, Christina B Felsen, H. Keipp Talbot, Lindsay Kim, Kathryn Como-Sabetti, Evan J. Anderson, Susan I. Gerber, Courtney Crawford, and Pam Daily Kirley
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0301 basic medicine ,education.field_of_study ,business.industry ,Population ,medicine.disease_cause ,Virology ,Virus ,Abstracts ,03 medical and health sciences ,RSV Infections ,030104 developmental biology ,0302 clinical medicine ,Infectious Diseases ,Respiratory syncytial virus (RSV) ,B. Poster Abstracts ,Oncology ,030220 oncology & carcinogenesis ,medicine ,Respiratory system ,education ,business - Abstract
Background Respiratory syncytial virus (RSV) vaccines are in clinical development for older adults. We described RSV infections among adults requiring hospitalization and risk factors for severe outcomes using a population-based platform, the Influenza Hospitalization Surveillance Network (FluSurv-NET). Methods Surveillance occurred October 1–April 30 (2014–2017) at sites located in seven states (California, Georgia, Michigan, Minnesota, New York, Oregon, and Tennessee) covering an annual catchment population of up to 13 million adults ≥18 years. Laboratory-confirmed RSV cases were identified using hospital and state public health laboratories, hospital infection preventionists, and/or reportable condition databases. Medical charts were reviewed for demographic and clinical data. International Classification of Diseases (ICD) discharge codes were abstracted. Odds ratios (Oregon) and 95% confidence intervals (CIs) were determined to assess risk factors for ICU hospitalization and deaths. Results A total of 2,326 hospitalized RSV cases were identified. Over half were ≥65 years (62%, n = 1,438/2,326), female (59%, n = 1,362/2,326), white (70%, n = 1,301/1,855), and had ≥3 underlying medical conditions (52%, n = 1,204/2,326). 20% (n = 398/2,000) were hospitalized in the ICU (median length of stay, 3 days; interquartile range, 1–6 days), and 5% (n = 96/2,001) died in the hospital. Congestive heart failure (CHF; OR: 1.4, 95% CI: 1.1–1.8) and chronic obstructive pulmonary disease (COPD; OR: 1.3, 95% CI: 1.1–1.7) were associated with ICU admission, while age ≥80 years (OR: 4.1, 95% CI: 1.8–12.1) and CHF (OR: 2.4, 95% CI: 1.6–3.6) were associated with in-hospital deaths. RSV-specific ICD codes were listed in the first 9 positions in only 44% (879/1,987) of cases. Conclusion To our knowledge, this is the largest US case series of RSV-infected hospitalized adults. Most cases were ≥65 years and had multiple underlying medical conditions. Older age, CHF, and COPD were associated with the most severe outcomes. Few cases had RSV-specific ICD codes, suggesting that administrative data underestimate adult RSV-related hospitalizations. Continued surveillance is needed to understand the epidemiology of RSV among adults as vaccine products move toward licensure. Disclosures E. J. Anderson, NovaVax: Grant Investigator, Research grant. Pfizer: Grant Investigator, Research grant. AbbVie: Consultant, Consulting fee. MedImmune: Investigator, Research support. PaxVax: Investigator, Research support. Micron: Investigator, Research support. H. K. Talbot, sanofi pasteur: Investigator, Research grant. Gilead: Investigator, Research grant. MedImmune: Investigator, Research grant. Vaxinnate: Safety Board, none. Seqirus: Safety Board, none.
- Published
- 2018
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27. 364. The Capital District of New York State, Likely a New Blastomycosis Endemic Region
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Elizabeth Dufort, Brendan R Jackson, Alexandra Newman, Robert McDonald, Ellis H. Tobin, and Debra Blog
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Blastomyces ,medicine.medical_specialty ,business.industry ,Incidence (epidemiology) ,Disease progression ,Cutaneous blastomycosis ,medicine.disease ,Dermatology ,Pneumonia ,Abstracts ,Infectious Diseases ,Oncology ,B. Poster Abstracts ,Capital (economics) ,Medicine ,Disseminated blastomycosis ,business ,Blastomycosis - Abstract
Background Blastomycosis is a commonly misdiagnosed infection caused by Blastomyces spp. It is not reportable in New York State (NYS), but where reportable, yearly incidence is 1–2/100,000 persons. In October 2017, a physician notified the NYS Department of Health (NYSDOH) of six blastomycosis cases seen during April 2016–July 2017 in the nonendemic eastern upstate area known as the Capital District (CD). NYSDOH investigated to determine the possibility of locally acquired blastomycosis. Methods NYS hospital blastomycosis discharge codes from the January 2007–December 2016 Statewide Planning and Research Cooperative System dataset were reviewed. To better understand illness in the area of highest incidence, NYSDOH contacted CD physicians to identify patients diagnosed with blastomycosis during April 2016–February 2018. Chart reviews and interviews were conducted to obtain travel and disease progression details. Results During 2007–2016, there were 279 blastomycosis diagnoses in NYS. Mean annual blastomycosis diagnoses during 2007–2015 was 24 (incidence: 0.1/100,000 persons); in 2016, there were 59 blastomycosis diagnoses (incidence: 0.3/100,000 persons). A CD county had the highest state incidence, with a rate increase from 2.0/100,000 persons during 2007–2015 to 4.1/100,000 persons during 2016. CD physicians provided contact and clinical information for the six initially-identified patients and two additional patients seen during April 2016–February 2018. All experienced delays in diagnosis, seven lacked travel history, two had cutaneous blastomycosis, three had pulmonary blastomycosis, and three had disseminated blastomycosis. One died from blastomycosis and another required long-term ventilator support. Seven cases were identified by culture or histopathology; the diagnostic method for one was unknown. Conclusion One CD county had blastomycosis rates similar to known endemic areas; patients lacked travel history to endemic areas, indicating locally acquired blastomycosis might have occurred. To improve prompt diagnosis, NYS clinicians and laboratorians should consider blastomycosis in patients with pneumonia, even without travel history to endemic areas. Further evaluation is needed to determine whether the endemic area of NYS has expanded. Disclosures All authors: No reported disclosures.
- Published
- 2018
28. 385. The Value Added From Candida auris Point Prevalence and Environmental Studies in New York State
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Emily Lutterloh, Elizabeth Dufort, Snigdha Vallabhaneni, Richard Erazo, Belinda Ostrowsky, Sharon Tsay, Rafael Fernandez, Karen Southwick, Valerie B. Haley, Jane Greenko, Debra Blog, Lynn Leach, Eleanor Adams, Monica Quinn, Yan Chun Zhu, Sudha Chaturvedi, Rutvik Patel, and Ronald Jean Denis
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Environmental studies ,Abstracts ,Infectious Diseases ,Oncology ,Candida auris ,B. Poster Abstracts ,business.industry ,Statistics ,Prevalence ,Medicine ,business ,Value (mathematics) - Abstract
Background As of March 25 2018, 151 clinical cases of C. auris were diagnosed in NYS. We conducted point prevalence surveys (PPS) and environmental surveys (ES) to detect surveillance cases and assess the burden of environmental contamination in NYS healthcare facilities from September 12, 2016. Methods A PPS was defined as culturing ≥2 individuals at a healthcare facility that diagnosed, cared for, or was near a facility with a C. auris case. ES involved environmental swabbing in facilities where cases resided or were admitted. Cultures and polymerase chain reaction (PCR) were performed at the NYS Wadsworth Center. Results As of March 25, 2018, 81 PPS or ES had been conducted at 55 facilities. From these PPS, a total of 144 (6.1%) individuals were positive for C. auris by culture; 125 were PCR positive. The rates of culture positive C. auris identified patients varied by facility type: hospitals (38/767, 5.0%), long-term care facilities (LTCF) (88/1,404, 6.3%), long-term acute care (1/35, 2.9%), and co-located hospital and LTCF (17/138, 12.3%). The majority of the LTCF C. auris culture-positive cases (80/82) were identified in facilities that cared for ventilated patients. Rates in LTCF caring for ventilated patients were nearly 10 times as high as other LTCF [86/1,121 (7.7%) vs. 2/284 (0.7%)]. ES identified 86 (3.0%) samples positive by culture and 257 (8.9%) by PCR. Thirty-seven (67%) of the 55 facilities had at least one positive environmental sample by PCR or culture; many of these positive samples were from surfaces or equipment deemed to be “clean.” Over 1,900 person-hours were needed to conduct onsite PPS and ES that collected >4,200 human and >2,800 environmental samples and identified opportunities for improving basic infection prevention and environmental cleaning. Ten facilities, including the co-located hospital and LTCF, had multiple positive PPS or ES. Conclusion PPS conducted over 17 months detected many colonized individuals and C. auris in facility environments, likely indicating a silent reservoir for this organism beyond clinical cases, especially in LTCFs. Serial PPS and ES can help improve C. auris detection and inform subsequent infection prevention and control interventions. However, these efforts are resource intensive and can divert resources from other activities. Disclosures All authors: No reported disclosures.
- Published
- 2018
29. 666. Human Granulocytic Anaplasmosis and Ehrlichiosis Presenting to an Upstate New York Emergency Department
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Jeffrey S. Kennedy, Michael J. Waxman, Kathleen A. Stellrecht, Elizabeth Dufort, Jennifer L. White, and Abigale Eichelman
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Tick-borne disease ,Leukopenia ,Ehrlichiosis ,biology ,Human granulocytic anaplasmosis ,business.industry ,Emergency department ,medicine.disease ,biology.organism_classification ,Virology ,Anaplasma phagocytophilum ,Abstracts ,Infectious Diseases ,Oncology ,Patient disposition ,B. Poster Abstracts ,medicine ,Transaminitis ,medicine.symptom ,business - Abstract
Background Human granulocytic anaplasmosis (HGA) is an increasingly common tickborne infection in the North-East United States. Statewide incidence of human cases of anaplasmosis in New York (excluding New York City) increased 407% from 2010–2017, with a corresponding increase in Anaplasma phagocytophilum prevalence in ticks. While previous observational studies have described the clinical features of HGA, there has been little documentation of HGA diagnosed in the emergency department (ED) setting. Methods Demographic and clinical data were extracted from electronic records of cases with a positive polymerase chain reaction (PCR) for HGA or the closely related clinical entity ehrlichiosis from 2016 to 2017. HGA and ehrlichiosis PCR were performed by the Albany Medical Center laboratory on patients treated in the ED. Basic descriptive analyses were performed. Results During the 2-year period, there were 37 cases of PCR-positive HGA and four cases of PCR-positive ehrlichiosis treated in the ED. Electronic data were available for extraction for 40 of these cases. Mean age was 54 years old (range 7–94 years). Thirty-four (85%) patients presented with fever, and 9 (23%) reported a tick bite or tick exposure. Twenty-two (55%) patients had leukopenia; 32 (80%) thrombocytopenia; 26 (65%) hyponatremia; 24 (60%) elevated transaminases; 38 (95%) at least one of these laboratory abnormality; and 13 (33%) all four laboratory abnormalities. Twenty-four patients (60%) were given the empiric diagnosis of a tickborne illness upon disposition from the ED, with 19 (48%) patients admitted to the hospital. Conclusion To our knowledge, this study represents the first description of patients diagnosed with HGA (and ehrlichiosis) in the ED setting. Because of the inherent testing bias, further study is needed to establish the true ED prevalence of HGA in highly endemic regions. Notably, only 23% reported either a tick bite or tick exposure, highlighting the need to consider this for diagnosis in patients presenting to the ED with consistent symptoms and laboratory findings in endemic areas. Further study might explore whether there exists a collection of laboratory findings that could accurately identify HGA in ED patients. Disclosures All authors: No reported disclosures.
- Published
- 2018
30. Clinical Features and Outcomes of Immunocompromised Adults Hospitalized with Laboratory-confirmed Influenza in the USA, 2011–2015
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Monica M. Farley, Mary Louise Lindegren, Joan Baumbach, Mary Hill, Jennifer P. Collins, Kimberly Yousey-Hines, Patricia Ryan, Ann Thomas, Nancy M. Bennett, Nisha B Alden, William Schaffner, Pam Daily Kirley, Charisse N Cummings, Angela Campbell, Elizabeth Dufort, Evan J. Anderson, Shikha Garg, Ruth Lynfield, Krista Lung, Seth Eckel, and Kyle P Openo
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Gerontology ,medicine.medical_specialty ,Abstracts ,Infectious Diseases ,Oncology ,business.industry ,Family medicine ,Medicine ,Poster Abstract ,business - Abstract
Background Data on immunocompromised (IC) adults with influenza are limited but suggest they may present differently and have worse outcomes than non-IC adults. Using a national surveillance system, we describe the epidemiology of IC adults hospitalized with influenza. Methods We analyzed data on adults (aged ≥18 years) hospitalized with laboratory-confirmed influenza during the 2011–2012 through 2014–2015 seasons and reported to CDC’s Influenza Hospitalization Surveillance Network (FluSurv-NET). We defined IC patients as having ≥1 of the following: HIV, AIDS, cancer, stem cell or organ transplantation, non-steroid immunosuppressive therapy, immunoglobulin deficiency, asplenia, and other rare conditions. We compared IC and non-IC patients using χ2 or Fisher’s exact tests and t-tests or Mann–Whitney U tests. Results Among 35,348 adults hospitalized over four seasons, 3,633 (10%) were IC. The most common IC conditions were cancer (44%), non-steroid immunosuppressive therapy (44%), and HIV (17%). IC patients were younger than non-IC patients (mean 61 ± 17 vs. 67 ± 20 years; P < 0.01). IC patients were more likely to have underlying renal disease (27% vs. 18%) and liver disease (7% vs. 3%) and less likely to have most other chronic underlying conditions including obesity (18% vs. 23%), cardiovascular disease (40% vs. 47%), and chronic lung disease (35% vs. 41%; P < 0.01 for all). IC patients were more likely to have received influenza vaccination (53% vs. 46%; P < 0.01). Among cases with symptom data (2014–2015), IC patients were more likely to present with fever (68% vs. 61%; P < 0.01) but respiratory distress was similar (53% vs. 54%; P = 0.3). Overall, the majority of IC and non-IC patients received antivirals (87% vs. 85%; P < 0.01). IC patients had a longer duration of hospitalization (median (IQR) 4 (2–6) vs. 3 (2–6) days; P < 0.01) and were more likely to be diagnosed with pneumonia (34 vs. 31%; P < 0.01) and to require intensive care (18% vs. 16%; P = 0.01). Death during hospitalization occurred in 135 (3.7%) IC and 945 (3.0%) non-IC patients (P = 0.01). Conclusion Among adults hospitalized with influenza, IC patients had worse outcomes including a longer duration of hospitalization and higher probability of pneumonia and intensive care unit admission, and increased all-cause mortality, although these results are not adjusted for potential confounders. Disclosures W. Schaffner, Pfizer: Scientific Advisor, Consulting fee. Merck: Scientific Advisor, Consulting fee. Novavax: Consultant, Consulting fee. Dynavax: Consultant, Consulting fee. Sanofi-pasteur: Consultant, Consulting fee. GSK: Consultant, Consulting fee. Seqirus: Consultant, Consulting fee. E. J. Anderson, AbbVie: Consultant, Consulting fee. NovaVax: Research Contractor, Research support. Regeneron: Research Contractor, Research grant. MedImmune: Research Contractor, Research grant and Research support
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- 2017
31. Emergence and Spread of Candida auris in New York State
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Rosalie Giardina, Richard Erazo, Emily Lutterloh, Monica Quinn, Rafael Fernandez, Jane Greenko, Ronald Jean Denis, Elizabeth Dufort, Karen Southwick, Eleanor Adams, Debra Blog, and Rutvik Patel
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Abstracts ,Infectious Diseases ,Oncology ,Candida auris ,State (polity) ,business.industry ,media_common.quotation_subject ,Medicine ,Environmental ethics ,Poster Abstract ,Social science ,business ,media_common - Abstract
Background Candida auris, an emerging yeast, has been detected in New York State (NYS). C. auris is often resistant to antifungal medications and has caused healthcare-associated outbreaks. We describe the emergence and spread of C. auris in NYS in multiple healthcare facilities. Methods C. auris cases were identified through active or passive surveillance. Isolates were identified using matrix-assisted laser desorption/ionization-time of flight mass spectrometry, and antifungal susceptibility testing was performed. Cases of C. auris were classified as clinical or screening depending on the reason for culture (diagnostic or surveillance). Invasive cases of Candida haemulonii were classified as probable if the yeast identification method used could not reliably identify C. auris and the isolate was not available. Surveillance methods included culturing contacts, conducting point prevalence surveys, and collecting environmental cultures. Facility site visits were conducted to review infection control practices when transmission was suspected. Results As of May 15, 2017, 53 clinical, 17 screening, and four probable cases had been reported. Twenty-three of the 53 clinical cases died. Clinical cases were identified in 18 hospitals, one long-term acute care hospital (LTACH), and one private medical office, but the cases passed through 24 hospitals, 24 long-term care facilities, and one LTACH in the 90 days before diagnosis through May 15, 2017. Although the facilities were located eight counties, 42 of 53 (79%) of the cases were residents in three downstate metropolitan counties. Site visits identified areas for improvement in infection control, including adherence to recommended hand hygiene practices, standard and contact precautions, and environmental cleaning practices. Isolates from 52 of 53 clinical cases were resistant to fluconazole. Amphotericin B susceptibility varied. Initial isolates from all clinical cases were susceptible to echinocandins; one case developed echinocandin resistance during treatment. Conclusion C. auris has emerged as a novel pathogen in NYS and has been detected in multiple healthcare facilities. The spread to many facilities likely reflects the challenges of detection and demonstrates the need for strict infection control practices. Disclosures All authors: No reported disclosures.
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- 2017
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32. Underreporting of Necrotizing Fasciitis and Streptococcal Toxic Shock Syndrome in Invasive Group A Streptococcus Cases in New York State, 2007–2016
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Elizabeth Dufort, Shelley M. Zansky, Debra Blog, and Jemma V Rowlands
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medicine.medical_specialty ,business.industry ,Streptococcus ,medicine.disease_cause ,medicine.disease ,Dermatology ,Infectious Diseases ,Oncology ,Streptococcal toxic shock syndrome ,Medicine ,Invasive group ,business ,Intensive care medicine ,Fasciitis - Published
- 2017
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33. The Changing Face of HIV in Pregnancy in Rhode Island 2004–2009
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Aadia Rana, Nicole E. Alexander, Chia-Ching Wang, Elizabeth Dufort, Fizza S. Gillani, Jacqueline Firth, and Susan Cu-Uvin
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Adult ,medicine.medical_specialty ,Adolescent ,Pregnancy Rate ,Demographics ,Article Subject ,HIV diagnosis ,Human immunodeficiency virus (HIV) ,Emigrants and Immigrants ,HIV Infections ,Reproductive Behavior ,Dermatology ,medicine.disease_cause ,lcsh:Gynecology and obstetrics ,lcsh:Infectious and parasitic diseases ,Cohort Studies ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Pregnancy ,medicine ,Humans ,lcsh:RC109-216 ,030212 general & internal medicine ,Pregnancy Complications, Infectious ,Young adult ,lcsh:RG1-991 ,030505 public health ,Obstetrics ,business.industry ,Rhode Island ,Obstetrics and Gynecology ,Abortion, Induced ,medicine.disease ,3. Good health ,Pregnancy rate ,Infectious Diseases ,Female ,Hiv status ,0305 other medical science ,business ,Research Article ,Demography ,Cohort study - Abstract
Meeting the needs of HIV-infected pregnant women requires understanding their backgrounds and potential barriers to care and safe pregnancy. Foreign-born women are more likely to have language, educational, and economic barriers to care, but may be even more likely to choose to keep a pregnancy. Data from HIV-infected pregnant women and their children in Rhode Island were analyzed to identify trends in demographics, viral control, terminations, miscarriages, timing of diagnosis, and adherence to followup. Between January 2004 and December 2009, 76 HIV-infected women became pregnant, with a total of 95 pregnancies. Seventy-nine percent of the women knew their HIV status prior to becoming pregnant. Fifty-four percent of the women were foreign-born and 38 percent of the 16 women who chose to terminate their pregnancies were foreign-born. While the number of HIV-infected women becoming pregnant has increased only slightly, the proportion that are foreign-born has been rising, from 41 percent between 2004 and 2005 to 57.5 percent between 2006 and 2009. A growing number of women are having multiple pregnancies after their HIV diagnosis, due to the strength of their desire for childbearing and the perception that HIV is a controllable illness that does not preclude the creation of a family.
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- 2012
34. Global health medical education in Rhode Island: a review and look to the future
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Elizabeth, Dufort, Michael, Waxman, Robert, Partridge, and Lawrence, Proano
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Education, Medical ,Education, Public Health Professional ,Humans ,Rhode Island ,Curriculum ,Global Health - Published
- 2010
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