26 results on '"Elhamy, Heba"'
Search Results
2. Adaptive Local Window for Level Set Segmentation of CT and MRI Liver Lesions.
- Author
-
Assaf Hoogi, Christopher F. Beaulieu, Guilherme M. Cunha, Elhamy Heba, Claude B. Sirlin, Sandy Napel, and Daniel L. Rubin
- Published
- 2016
3. Noninvasive Diagnosis of Nonalcoholic Fatty Liver Disease and Quantification of Liver Fat with Radiofrequency Ultrasound Data Using One-dimensional Convolutional Neural Networks
- Author
-
Claude B. Sirlin, John W. Erdman, Elhamy Heba, Michal Byra, Michael P. Andre, Rohit Loomba, William D. O'Brien, and Aiguo Han
- Subjects
Male ,Radio Waves ,Image Processing ,Medical and Health Sciences ,Oral and gastrointestinal ,030218 nuclear medicine & medical imaging ,Random Allocation ,Liver disease ,Computer-Assisted ,0302 clinical medicine ,Non-alcoholic Fatty Liver Disease ,Nonalcoholic fatty liver disease ,Image Processing, Computer-Assisted ,Prospective Studies ,Prospective cohort study ,Original Research ,Ultrasonography ,screening and diagnosis ,medicine.diagnostic_test ,Liver Disease ,Ultrasound ,Middle Aged ,Magnetic Resonance Imaging ,Detection ,Nuclear Medicine & Medical Imaging ,030220 oncology & carcinogenesis ,Predictive value of tests ,Biomedical Imaging ,Female ,4.2 Evaluation of markers and technologies ,Neural Networks ,Chronic Liver Disease and Cirrhosis ,Sensitivity and Specificity ,Computer ,03 medical and health sciences ,Clinical Research ,Predictive Value of Tests ,Artificial Intelligence ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,business.industry ,Magnetic resonance imaging ,medicine.disease ,Confidence interval ,Neural Networks, Computer ,Steatosis ,Digestive Diseases ,business ,Nuclear medicine - Abstract
BACKGROUND: Radiofrequency ultrasound data from the liver contain rich information about liver microstructure and composition. Deep learning might exploit such information to assess nonalcoholic fatty liver disease (NAFLD). PURPOSE: To develop and evaluate deep learning algorithms that use radiofrequency data for NAFLD assessment, with MRI-derived proton density fat fraction (PDFF) as the reference. MATERIALS AND METHODS: A HIPAA-compliant secondary analysis of a single-center prospective study was performed for adult participants with NAFLD and control participants without liver disease. Participants in the parent study were recruited between February 2012 and March 2014 and underwent same-day US and MRI of the liver. Participants were randomly divided into an equal number of training and test groups. The training group was used to develop two algorithms via cross-validation: a classifier to diagnose NAFLD (MRI PDFF ≥ 5%) and a fat fraction estimator to predict MRI PDFF. Both algorithms used one-dimensional convolutional neural networks. The test group was used to evaluate the classifier for sensitivity, specificity, positive predictive value, negative predictive value, and accuracy and to evaluate the estimator for correlation, bias, limits of agreements, and linearity between predicted fat fraction and MRI PDFF. RESULTS: A total of 204 participants were analyzed, 140 had NAFLD (mean age, 52 years ± 14 [standard deviation]; 82 women) and 64 were control participants (mean age, 46 years ± 21; 42 women). In the test group, the classifier provided 96% (95% confidence interval [CI]: 90%, 99%) (98 of 102) accuracy for NAFLD diagnosis (sensitivity, 97% [95% CI: 90%, 100%], 68 of 70; specificity, 94% [95% CI: 79%, 99%], 30 of 32; positive predictive value, 97% [95% CI: 90%, 99%], 68 of 70; negative predictive value, 94% [95% CI: 79%, 98%], 30 of 32). The estimator-predicted fat fraction correlated with MRI PDFF (Pearson r = 0.85). The mean bias was 0.8% (P = .08), and 95% limits of agreement were -7.6% to 9.1%. The predicted fat fraction was linear with an MRI PDFF of 18% or less (r = 0.89, slope = 1.1, intercept = 1.3) and nonlinear with an MRI PDFF greater than 18%. CONCLUSION: Deep learning algorithms using radiofrequency ultrasound data are accurate for diagnosis of nonalcoholic fatty liver disease and hepatic fat fraction quantification when other causes of steatosis are excluded. © RSNA, 2020 Online supplemental material is available for this article. See also the editorial by Lockhart and Smith in this issue.
- Published
- 2020
4. Assessment of a high-SNR chemical-shift-encoded MRI with complex reconstruction for proton density fat fraction (PDFF) estimation overall and in the low-fat range
- Author
-
Claude B. Sirlin, Anthony Gamst, Gavin Hamilton, William Haufe, Yesenia Covarrubias, Charlie C. Park, Elhamy Heba, Jeffrey B. Schwimmer, Diego Hernando, Michael S. Middleton, Scott B. Reeder, Mark Bydder, Jonathan Hooker, Catherine A. Hooker, Rohit Loomba, Alexandra Schlein, Tanya Wolfson, and Emily Bass
- Subjects
Accuracy and precision ,education.field_of_study ,business.industry ,Population ,Proton density fat fraction ,computer.software_genre ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Region of interest ,Voxel ,Linear regression ,Range (statistics) ,Radiology, Nuclear Medicine and imaging ,In patient ,Nuclear medicine ,business ,education ,computer ,Mathematics - Abstract
Author(s): Park, Charlie C; Hooker, Catherine; Hooker, Jonathan C; Bass, Emily; Haufe, William; Schlein, Alexandra; Covarrubias, Yesenia; Heba, Elhamy; Bydder, Mark; Wolfson, Tanya; Gamst, Anthony; Loomba, Rohit; Schwimmer, Jeffrey; Hernando, Diego; Reeder, Scott B; Middleton, Michael; Sirlin, Claude B; Hamilton, Gavin | Abstract: BACKGROUND:Improving the signal-to-noise ratio (SNR) of chemical-shift-encoded MRI acquisition with complex reconstruction (MRI-C) may improve the accuracy and precision of noninvasive proton density fat fraction (PDFF) quantification in patients with hepatic steatosis. PURPOSE:To assess the accuracy of high SNR (Hi-SNR) MRI-C versus standard MRI-C acquisition to estimate hepatic PDFF in adult and pediatric nonalcoholic fatty liver disease (NAFLD) using an MR spectroscopy (MRS) sequence as the reference standard. STUDY TYPE:Prospective. POPULATION/SUBJECTS:In all, 231 adult and pediatric patients with known or suspected NAFLD. FIELD STRENGTH/SEQUENCE:PDFF estimated at 3T by three MR techniques: standard MRI-C; a Hi-SNR MRI-C variant with increased slice thickness, decreased matrix size, and no parallel imaging; and MRS (reference standard). ASSESSMENT:MRI-PDFF was measured by image analysts using a region of interest coregistered with the MRS-PDFF voxel. STATISTICAL TESTS:Linear regression analyses were used to assess accuracy and precision of MRI-estimated PDFF for MRS-PDFF as a function of MRI-PDFF using the standard and Hi-SNR MRI-C for all patients and for patients with MRS-PDFF l10%. RESULTS:In all, 271 exams from 231 patients were included (mean MRS-PDFF: 12.6% [SD: 10.4]; range: 0.9-41.9). High agreement between MRI-PDFF and MRS-PDFF was demonstrated across the overall range of PDFF, with a regression slope of 1.035 for the standard MRI-C and 1.008 for Hi-SNR MRI-C. Hi-SNR MRI-C, compared to standard MRI-C, provided small but statistically significant improvements in the slope (respectively, 1.008 vs. 1.035, P = 0.004) and mean bias (0.412 vs. 0.673, P l 0.0001) overall. In the low-fat patients only, Hi-SNR MRI-C provided improvements in the slope (1.058 vs. 1.190, P = 0.002), mean bias (0.168 vs. 0.368, P = 0.007), intercept (-0.153 vs. -0.796, P l 0.0001), and borderline improvement in the R2 (0.888 vs. 0.813, P = 0.01). DATA CONCLUSION:Compared to standard MRI-C, Hi-SNR MRI-C provides slightly higher MRI-PDFF estimation accuracy across the overall range of PDFF and improves both accuracy and precision in the low PDFF range. LEVEL OF EVIDENCE:1 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2019;49:229-238.
- Published
- 2018
- Full Text
- View/download PDF
5. Diagnostic accuracy of magnetic resonance imaging hepatic proton density fat fraction in pediatric nonalcoholic fatty liver disease
- Author
-
Claude B. Sirlin, Elhamy Heba, Jeffrey B. Schwimmer, James Tonascia, Joel E. Lavine, Mark L. Van Natta, Andrew T. Trout, Michael S. Middleton, Wei Shen, Prakash Masand, Edward Doo, Adina Alazraki, Elizabeth M. Brunt, Gavin Hamilton, and David E. Kleiner
- Subjects
Male ,medicine.medical_specialty ,Adolescent ,Cysteamine ,Sensitivity and Specificity ,Gastroenterology ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Double-Blind Method ,Non-alcoholic Fatty Liver Disease ,Internal medicine ,Nonalcoholic fatty liver disease ,medicine ,Humans ,Prospective Studies ,Child ,Cystine Depleting Agents ,Prospective cohort study ,Hepatology ,medicine.diagnostic_test ,business.industry ,Proton density fat fraction ,Magnetic resonance imaging ,medicine.disease ,Magnetic Resonance Imaging ,Confidence interval ,Cross-Sectional Studies ,Liver ,Liver biopsy ,Female ,030211 gastroenterology & hepatology ,Radiology ,Protons ,Steatosis ,business - Abstract
Author(s): Middleton, Michael S; Van Natta, Mark L; Heba, Elhamy R; Alazraki, Adina; Trout, Andrew T; Masand, Prakash; Brunt, Elizabeth M; Kleiner, David E; Doo, Edward; Tonascia, James; Lavine, Joel E; Shen, Wei; Hamilton, Gavin; Schwimmer, Jeffrey B; Sirlin, Claude B; NASH Clinical Research Network | Abstract: We assessed the performance of magnetic resonance imaging (MRI) proton density fat fraction (PDFF) in children to stratify hepatic steatosis grade before and after treatment in the Cysteamine Bitartrate Delayed-Release for the Treatment of Nonalcoholic Fatty Liver Disease in Children (CyNCh) trial, using centrally scored histology as reference. Participants had multiecho 1.5 Tesla (T) or 3T MRI on scanners from three manufacturers. Of 169 enrolled children, 110 (65%) and 83 (49%) had MRI and liver biopsy at baseline and at end of treatment (EOT; 52 weeks), respectively. At baseline, 17% (19 of 110), 28% (31 of 110), and 55% (60 of 110) of liver biopsies showed grades 1, 2, and 3 histological steatosis; corresponding PDFF (meann±nSD) values were 10.9n±n4.1%, 18.4n±n6.2%, and 25.7n±n9.7%, respectively. PDFF classified grade 1 versus 2-3 and 1-2 versus 3 steatosis with areas under receiving operator characteristic curves (AUROCs) of 0.87 (95% confidence interval [CI], 0.80, 0.94) and 0.79 (0.70, 0.87), respectively. PDFF cutoffs at 90% specificity were 17.5% for grades 2-3 steatosis and 23.3% for grade 3 steatosis. At EOT, 47% (39 of 83), 41% (34 of 83), and 12% (10 of 83) of biopsies showed improved, unchanged, and worsened steatosis grade, respectively, with corresponding PDFF (meann±nSD) changes of -7.8n±n6.3%, -1.2n±n7.8%, and 4.9n±n5.0%, respectively. PDFF change classified steatosis grade improvement and worsening with AUROCs (95% CIs) of 0.76 (0.66, 0.87) and 0.83 (0.73, 0.92), respectively. PDFF change cut-off values at 90% specificity were -11.0% and +5.5% for improvement and worsening.ConclusionMRI-estimated PDFF has high diagnostic accuracy to both classify and predict histological steatosis grade and change in histological steatosis grade in children with NAFLD. (Hepatology 2018;67:858-872).
- Published
- 2018
- Full Text
- View/download PDF
6. Cross-sectional correlation between hepatic R2* and proton density fat fraction (PDFF) in children with hepatic steatosis
- Author
-
Gavin Hamilton, Cheng William Hong, Melissa Paiz, Jeffrey B. Schwimmer, Anthony Gamst, Paul Manning, Alexandra Schlein, Tanya Wolfson, Jonathan Hooker, Charlie C. Park, Adrija Mamidipalli, Janis Durelle, Claude B. Sirlin, Michael S. Middleton, and Elhamy Heba
- Subjects
Mri techniques ,medicine.diagnostic_test ,business.industry ,Proton density fat fraction ,Magnetic resonance imaging ,medicine.disease ,030218 nuclear medicine & medical imaging ,Correlation ,03 medical and health sciences ,0302 clinical medicine ,Secondary analysis ,medicine ,Radiology, Nuclear Medicine and imaging ,Prospective research ,Steatosis ,business ,Nuclear medicine ,030217 neurology & neurosurgery - Abstract
Author(s): Mamidipalli, Adrija; Hamilton, Gavin; Manning, Paul; Hong, Cheng William; Park, Charlie C; Wolfson, Tanya; Hooker, Jonathan; Heba, Elhamy; Schlein, Alexandra; Gamst, Anthony; Durelle, Janis; Paiz, Melissa; Middleton, Michael S; Schwimmer, Jeffrey B; Sirlin, Claude B | Abstract: PURPOSE:To determine the relationship between hepatic proton density fat fraction (PDFF) and R2* in vivo. MATERIALS AND METHODS:In this Health Insurance Portability and Accountability Act (HIPAA)-compliant, Institutional Review Board (IRB)-approved, cross-sectional study, we conducted a secondary analysis of 3T magnetic resonance imaging (MRI) exams performed as part of prospective research studies in children in whom conditions associated with iron overload were excluded clinically. Each exam included low-flip-angle, multiecho magnitude (-M) and complex (-C) based chemical-shift-encoded MRI techniques with spectral modeling of fat to generate hepatic PDFF and R2* parametric maps. For each technique and each patient, regions of interest were placed on the maps in each of the nine Couinaud segments, and composite whole-liver PDFF and R2* values were calculated. Pearson's correlation coefficients between PDFF and R2* were computed for each MRI technique. Correlations were compared using Steiger's test. RESULTS:In all, 184 children (123 boys, 61 girls) were included in this analysis. PDFF estimated by MRI-M and MRI-C ranged from 1.1-35.4% (9.44 ± 8.76) and 2.1-38.1% (10.1 ± 8.7), respectively. R2* estimated by MRI-M and MRI-C ranged from 32.6-78.7 s-1 (48.4 ± 9.8) and 27.2-71.5 s-1 (42.2 ± 8.6), respectively. There were strong and significant correlations between hepatic PDFF and R2* values estimated by MRI-M (r = 0.874; P l 0.0001) and MRI-C (r = 0.853; P l 0.0001). The correlation coefficients (0.874 vs. 0.853) were not significantly different (P = 0.15). CONCLUSION:Hepatic PDFF and R2* are strongly correlated with each other in vivo. This relationship was observed using two different MRI techniques. LEVEL OF EVIDENCE:2 Technical Efficacy: Stage 1 J. Magn. Reson. Imaging 2018;47:418-424.
- Published
- 2017
- Full Text
- View/download PDF
7. Non-invasive Quantitative Magnetic Resonance Imaging and Spectroscopic Biomarkers in Nonalcoholic Fatty Liver Disease and Other Cardiometabolic Diseases Associated with Ectopic Fat Deposition
- Author
-
Elhamy Heba, Gavin Hamilton, Michael S. Middleton, and Claude B. Sirlin
- Subjects
Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Skeletal muscle ,Magnetic resonance imaging ,Type 2 diabetes ,medicine.disease ,Obesity ,medicine.anatomical_structure ,Nonalcoholic fatty liver disease ,medicine ,Biomarker (medicine) ,Metabolic syndrome ,Steatosis ,business - Abstract
Obesity is associated with ectopic fat deposition in various organs and tissues that may adversely affect their structure, and their metabolic function. In the context of developing new drugs for nonalcoholic fatty liver disease and related cardiometabolic conditions (obesity, type 2 diabetes, cardiovascular disease, metabolic syndrome), non-invasive quantitative imaging biomarkers have been developed to estimate hepatic steatosis, percentage and type of fat accumulation in skeletal muscle, and absolute and relative amounts of muscle, and subcutaneous and visceral body fat. Advanced magnetic resonance imaging (MRI) is widely considered to be well suited, and the preferred non-invasive method to estimate proton density fat fraction (PDFF), an accurate and precise biomarker of hepatic steatosis. Magnetic resonance spectroscopy (MRS) is currently the only non-invasive method to assess intramyocellular lipid (IMCL), a biomarker of fat accumulation within skeletal muscle cells. Finally, semi-automated MRI is emerging as the leading method to formulate an overall body composition profile (BCP), which provides a snapshot of fat and muscle composition in the body.
- Published
- 2019
- Full Text
- View/download PDF
8. Magnetic resonance elastography is superior to acoustic radiation force impulse for the Diagnosis of fibrosis in patients with biopsy‐proven nonalcoholic fatty liver disease: A prospective study
- Author
-
H. Aryafar, Jeffrey Cui, Carolyn Hernandez, William Haufe, Michael P. Andre, Mark A. Valasek, Jonathan Hooker, Elhamy Heba, Claude B. Sirlin, and Rohit Loomba
- Subjects
Liver Cirrhosis ,Adult ,Male ,medicine.medical_specialty ,Biopsy ,Chronic Liver Disease and Cirrhosis ,Clinical Sciences ,Immunology ,Medical Biochemistry and Metabolomics ,Gastroenterology ,Oral and gastrointestinal ,Hepatitis ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Clinical Research ,Non-alcoholic Fatty Liver Disease ,Fibrosis ,Internal medicine ,Nonalcoholic fatty liver disease ,medicine ,Humans ,Prospective Studies ,Prospective cohort study ,screening and diagnosis ,Gastroenterology & Hepatology ,Hepatology ,medicine.diagnostic_test ,Receiver operating characteristic ,business.industry ,Liver Disease ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic resonance elastography ,Detection ,Good Health and Well Being ,Cross-Sectional Studies ,Biomedical Imaging ,Elasticity Imaging Techniques ,Female ,030211 gastroenterology & hepatology ,Digestive Diseases ,business ,4.2 Evaluation of markers and technologies - Abstract
© 2015 by the American Association for the Study of Liver Diseases. Magnetic resonance elastography (MRE), an advanced magnetic resonance-based imaging technique, and acoustic radiation force impulse (ARFI), an ultrasound-based imaging technique, have been shown to be accurate for diagnosing nonalcoholic fatty liver disease (NAFLD) fibrosis. However, no head-to-head comparisons between MRE and ARFI for diagnosing NAFLD fibrosis have been performed. We compared MRE versus ARFI head-to-head for diagnosing fibrosis in well-characterized patients with biopsy-proven NAFLD. This cross-sectional analysis of a prospective cohort involved 125 patients (54.4% female) who underwent MRE, ARFI, and contemporaneous liver biopsies scored using the Nonalcoholic Steatohepatitis Clinical Research Network histological scoring system. The performances of MRE versus ARFI for diagnosing fibrosis were evaluated using area under the receiver operating characteristic curves (AUROCs). The mean (± standard deviation) age and body mass index were 48.9 (±15.4) years and 31.8 (±7.0) kg/m2, respectively. For diagnosing any fibrosis (≥ stage 1), the MRE AUROC was 0.799 (95% confidence interval [CI] 0.723-0.875), significantly (P=0.012) higher than the ARFI AUROC of 0.664 (95% CI 0.568-0.760). In stratified analysis by presence or absence of obesity, MRE was superior to ARFI for diagnosing any fibrosis in obese patients (P
- Published
- 2015
- Full Text
- View/download PDF
9. Intra- and inter-examination repeatability of magnetic resonance spectroscopy, magnitude-based MRI, and complex-based MRI for estimation of hepatic proton density fat fraction in overweight and obese children and adults
- Author
-
Gavin Hamilton, Yakir S Levin, Tanya Wolfson, Anthony Gamst, Amir K. Zand, Jonathan Hooker, Elhamy Heba, Claude B. Sirlin, Avishkar Tyagi, Michael S. Middleton, Omid Yeganeh, Rohit Loomba, and Jeffrey B. Schwimmer
- Subjects
Adult ,Male ,Pediatric Obesity ,medicine.medical_specialty ,Magnetic Resonance Spectroscopy ,Adolescent ,Urology ,Physics::Medical Physics ,Overweight ,Article ,Nuclear magnetic resonance ,Non-alcoholic Fatty Liver Disease ,Image Interpretation, Computer-Assisted ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Prospective Studies ,Radiological and Ultrasound Technology ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,Reproducibility of Results ,Proton density fat fraction ,Magnetic resonance imaging ,General Medicine ,Nuclear magnetic resonance spectroscopy ,Repeatability ,equipment and supplies ,Magnetic Resonance Imaging ,Cross-Sectional Studies ,Computer Science::Graphics ,Liver ,Female ,Radiology ,Protons ,medicine.symptom ,business ,human activities - Abstract
Determine intra- and inter-examination repeatability of magnitude-based magnetic resonance imaging (MRI-M), complex-based magnetic resonance imaging (MRI-C), and magnetic resonance spectroscopy (MRS) at 3T for estimating hepatic proton density fat fraction (PDFF), and using MRS as a reference, confirm MRI-M and MRI-C accuracy.Twenty-nine overweight and obese pediatric (n = 20) and adult (n = 9) subjects (23 male, 6 female) underwent three same-day 3T MR examinations. In each examination MRI-M, MRI-C, and single-voxel MRS were acquired three times. For each MRI acquisition, hepatic PDFF was estimated at the MRS voxel location. Intra- and inter-examination repeatability were assessed by computing standard deviations (SDs) and intra-class correlation coefficients (ICCs). Aggregate SD was computed for each method as the square root of the average of first repeat variances. MRI-M and MRI-C PDFF estimation accuracy was assessed using linear regression with MRS as a reference.For MRI-M, MRI-C, and MRS acquisitions, respectively, mean intra-examination SDs were 0.25%, 0.42%, and 0.49%; mean intra-examination ICCs were 0.999, 0.997, and 0.995; mean inter-examination SDs were 0.42%, 0.45%, and 0.46%; and inter-examination ICCs were 0.995, 0.992, and 0.990. Aggregate SD for each method was0.9%. Using MRS as a reference, regression slope, intercept, average bias, and R (2), respectively, for MRI-M were 0.99%, 1.73%, 1.61%, and 0.986, and for MRI-C were 0.96%, 0.43%, 0.40%, and 0.991.MRI-M, MRI-C, and MRS showed high intra- and inter-examination hepatic PDFF estimation repeatability in overweight and obese subjects. Longitudinal hepatic PDFF change1.8% (twice the maximum aggregate SD) may represent real change rather than measurement imprecision. Further research is needed to assess whether examinations performed on different days or with different MR technologists affect repeatability of MRS voxel placement and MRS-based PDFF measurements.
- Published
- 2015
- Full Text
- View/download PDF
10. Accuracy and the effect of possible subject-based confounders of magnitude-based MRI for estimating hepatic proton density fat fraction in adults, using MR spectroscopy as reference
- Author
-
Rohit Loomba, Alexandra Schlein, Tanya Wolfson, Ajinkya Desai, Claude B. Sirlin, Kevin A Zand, Anthony Gamst, Elhamy Heba, Gavin Hamilton, and Michael S. Middleton
- Subjects
In vivo magnetic resonance spectroscopy ,medicine.diagnostic_test ,business.industry ,Confounding ,Magnitude (mathematics) ,Magnetic resonance imaging ,computer.software_genre ,Regression ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Voxel ,Bayesian multivariate linear regression ,medicine ,030211 gastroenterology & hepatology ,Radiology, Nuclear Medicine and imaging ,Nuclear medicine ,business ,computer ,Body mass index ,Mathematics - Abstract
Author(s): Heba, Elhamy R; Desai, Ajinkya; Zand, Kevin A; Hamilton, Gavin; Wolfson, Tanya; Schlein, Alexandra N; Gamst, Anthony; Loomba, Rohit; Sirlin, Claude B; Middleton, Michael S | Abstract: PurposeTo determine the accuracy and the effect of possible subject-based confounders of magnitude-based magnetic resonance imaging (MRI) for estimating hepatic proton density fat fraction (PDFF) for different numbers of echoes in adults with known or suspected nonalcoholic fatty liver disease, using MR spectroscopy (MRS) as a reference.Materials and methodsIn this retrospective analysis of 506 adults, hepatic PDFF was estimated by unenhanced 3.0T MRI, using right-lobe MRS as reference. Regions of interest placed on source images and on six-echo parametric PDFF maps were colocalized to MRS voxel location. Accuracy using different numbers of echoes was assessed by regression and Bland-Altman analysis; slope, intercept, average bias, and R2 were calculated. The effect of age, sex, and body mass index (BMI) on hepatic PDFF accuracy was investigated using multivariate linear regression analyses.ResultsMRI closely agreed with MRS for all tested methods. For three- to six-echo methods, slope, regression intercept, average bias, and R2 were 1.01-0.99, 0.11-0.62%, 0.24-0.56%, and 0.981-0.982, respectively. Slope was closest to unity for the five-echo method. The two-echo method was least accurate, underestimating PDFF by an average of 2.93%, compared to an average of 0.23-0.69% for the other methods. Statistically significant but clinically nonmeaningful effects on PDFF error were found for subject BMI (P range: 0.0016 to 0.0783), male sex (P range: 0.015 to 0.037), and no statistically significant effect was found for subject age (P range: 0.18-0.24).ConclusionHepatic magnitude-based MRI PDFF estimates using three, four, five, and six echoes, and six-echo parametric maps are accurate compared to reference MRS values, and that accuracy is not meaningfully confounded by age, sex, or BMI.
- Published
- 2015
- Full Text
- View/download PDF
11. Accuracy of multiecho magnitude-based MRI (M-MRI) for estimation of hepatic proton density fat fraction (PDFF) in children
- Author
-
Joshua Chen, Jonathan Hooker, Kevin A Zand, Gavin Hamilton, Anthony Gamst, Elhamy Heba, Jeffrey B. Schwimmer, Claude B. Sirlin, Amol Shah, Tanya Wolfson, Jessica Lam, and Michael S. Middleton
- Subjects
Liver steatosis ,medicine.diagnostic_test ,business.industry ,Linear regression ,Retrospective analysis ,medicine ,Proton density fat fraction ,Radiology, Nuclear Medicine and imaging ,Magnetic resonance imaging ,Nuclear medicine ,business ,Reference standards ,Mathematics - Abstract
Author(s): Zand, Kevin A; Shah, Amol; Heba, Elhamy; Wolfson, Tanya; Hamilton, Gavin; Lam, Jessica; Chen, Joshua; Hooker, Jonathan C; Gamst, Anthony C; Middleton, Michael S; Schwimmer, Jeffrey B; Sirlin, Claude B | Abstract: PurposeTo assess accuracy of magnitude-based magnetic resonance imaging (M-MRI) in children to estimate hepatic proton density fat fraction (PDFF) using two to six echoes, with magnetic resonance spectroscopy (MRS) -measured PDFF as a reference standard.MethodsThis was an IRB-approved, HIPAA-compliant, single-center, cross-sectional, retrospective analysis of data collected prospectively between 2008 and 2013 in children with known or suspected nonalcoholic fatty liver disease (NAFLD). Two hundred eighty-six children (8-20 [mean 14.2 ± 2.5] years; 182 boys) underwent same-day MRS and M-MRI. Unenhanced two-dimensional axial spoiled gradient-recalled-echo images at six echo times were obtained at 3T after a single low-flip-angle (10°) excitation with ≥ 120-ms recovery time. Hepatic PDFF was estimated using the first two, three, four, five, and all six echoes. For each number of echoes, accuracy of M-MRI to estimate PDFF was assessed by linear regression with MRS-PDFF as reference standard. Accuracy metrics were regression intercept, slope, average bias, and R(2) .ResultsMRS-PDFF ranged from 0.2-40.4% (mean 13.1 ± 9.8%). Using three to six echoes, regression intercept, slope, and average bias were 0.46-0.96%, 0.99-1.01, and 0.57-0.89%, respectively. Using two echoes, these values were 2.98%, 0.97, and 2.72%, respectively. R(2) ranged 0.98-0.99 for all methods.ConclusionUsing three to six echoes, M-MRI has high accuracy for hepatic PDFF estimation in children.
- Published
- 2015
- Full Text
- View/download PDF
12. Sources of systematic error in proton density fat fraction (PDFF) quantification in the liver evaluated from magnitude images with different numbers of echoes
- Author
-
Jeffrey B. Schwimmer, Elhamy Heba, Mark Bydder, Ludovic de Rochefort, Rohit Loomba, Ajinkya Desai, Claude B. Sirlin, Nikolaus M. Szeverenyi, Gavin Hamilton, Centre de résonance magnétique biologique et médicale (CRMBM), Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS), Centre d'Exploration Métabolique par Résonance Magnétique [Hôpital de la Timone - AP-HM] (CEMEREM), Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS)- Hôpital de la Timone [CHU - APHM] (TIMONE), Aix Marseille Université (AMU), Centre National de la Recherche Scientifique (CNRS), Department of Radiology [San Diego], University of California [San Diego] (UC San Diego), University of California-University of California, Department of Medicine [San Diego], University of California, Department of Pediatrics [san Diego], UC San Diego School of Medicine, Rady Children's Hospital, Centre d'Exploration Métabolique par Résonance Magnétique [Hôpital de la Timone - APHM] (CEMEREM), Hôpital de la Timone [CHU - APHM] (TIMONE)-Centre de résonance magnétique biologique et médicale (CRMBM), Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS), Department of Radiology [Univ California San Diego] (UC San Diego), School of Medicine [Univ California San Diego] (UC San Diego), University of California (UC)-University of California (UC)-University of California [San Diego] (UC San Diego), University of California (UC)-University of California (UC), Department of Medicine [Univ California San Diego] (MED - UC San Diego), University of California (UC), and Department of Pediatrics [Univ California San Diego] (UC San Diego)
- Subjects
Systematic error ,Adult ,Male ,bias ,Adolescent ,[SDV]Life Sciences [q-bio] ,Gaussian ,Clinical Sciences ,Biomedical Engineering ,Magnitude (mathematics) ,PDFF ,liver ,Noise (electronics) ,Article ,030218 nuclear medicine & medical imaging ,[SPI]Engineering Sciences [physics] ,03 medical and health sciences ,symbols.namesake ,Young Adult ,Medicinal and Biomolecular Chemistry ,0302 clinical medicine ,Nuclear magnetic resonance ,Quality (physics) ,Clinical Research ,NAFLD ,Humans ,Radiology, Nuclear Medicine and imaging ,Spectroscopy ,Child ,ComputingMilieux_MISCELLANEOUS ,Aged ,Adiposity ,[PHYS]Physics [physics] ,Signal variation ,Chemistry ,Proton density fat fraction ,Middle Aged ,Magnetic Resonance Imaging ,Nuclear Medicine & Medical Imaging ,Liver ,symbols ,Molecular Medicine ,Regression Analysis ,Female ,Protons ,fat quantification ,030217 neurology & neurosurgery - Abstract
The purpose of this work was to investigate sources of bias in magnetic resonance imaging (MRI) liver fat quantification that lead to a dependence of the proton density fat fraction (PDFF) on the number of echoes. This was a retrospective analysis of liver MRI data from 463 subjects. The magnitude signal variation with TE from spoiled gradient echo images was curve fitted to estimate the PDFF using a model that included monoexponential R2 * decay and a multi-peak fat spectrum. Additional corrections for non-exponential decay (Gaussian), bi-exponential decay, degree of fat saturation, water frequency shift and noise bias were introduced. The fitting error was minimized with respect to 463 × 3 = 1389 subject-specific parameters and seven additional parameters associated with these corrections. The effect on PDFF was analyzed, notably the dependence on the number of echoes. The effects on R2 * were also analyzed. The results showed that the inclusion of bias corrections resulted in an increase in the quality of fit (r2 ) in 427 of 463 subjects (i.e. 92.2%) and a reduction in the total fitting error (residual norm) of 43.6%. This was largely a result of the Gaussian decay (57.8% of the reduction), fat spectrum (31.0%) and biexponential decay (8.8%) terms. The inclusion of corrections was also accompanied by a decrease in the dependence of PDFF on the number of echoes. Similar analysis of R2 * showed a decrease in the dependence on the number of echoes. Comparison of PDFF with spectroscopy indicated excellent agreement before and after correction, but the latter exhibited lower bias on a Bland-Altman plot (1.35% versus 0.41%). In conclusion, correction for known and expected biases in PDFF quantification in liver reduces the fitting error, decreases the dependence on the number of echoes and increases the accuracy.
- Published
- 2018
- Full Text
- View/download PDF
13. Effect of intravenous gadoxetate disodium and flip angle on hepatic proton density fat fraction estimation with six-echo, gradient-recalled-echo, magnitude-based MR imaging at 3T
- Author
-
Elhamy Heba, Michael S. Middleton, Eduardo A. C. Costa, Jonathan Hooker, Claude B. Sirlin, Gavin Hamilton, Ajinkya Desai, Lisa Clark, Charlie C. Park, Tanya Wolfson, Kevin A Zand, Anthony Gamst, and Rohit Loomba
- Subjects
Adult ,Gadolinium DTPA ,Male ,In vivo magnetic resonance spectroscopy ,Hepatic steatosis ,Urology ,Contrast Media ,Magnitude (mathematics) ,PDFF ,computer.software_genre ,Eovist ,030218 nuclear medicine & medical imaging ,Gadoxetate Disodium ,03 medical and health sciences ,0302 clinical medicine ,Flip angle ,Clinical Research ,Voxel ,Linear regression ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Prospective Studies ,Aged ,Radiological and Ultrasound Technology ,business.industry ,Echo (computing) ,Gastroenterology ,Middle Aged ,Image Enhancement ,Magnetic Resonance Imaging ,Regression ,Fatty Liver ,Biomedical Imaging ,Female ,Gadoxetate disodium ,Protons ,Nuclear medicine ,business ,computer ,030217 neurology & neurosurgery ,MRI - Abstract
PurposeThe aim of the study was to determine in patients undergoing gadoxetate disodium (Gx)-enhanced MR exams whether proton density fat fraction (PDFF) estimation accuracy of magnitude-based multi-gradient-echo MRI (MRI-M) could be improved by using high flip angle (FA) on post-contrast images.Materials and methodsThirty-one adults with known or suspected hepatic steatosis undergoing 3T clinical Gx-enhanced liver MRI were enrolled prospectively. MR spectroscopy (MRS), the reference standard, was performed before Gx to measure MRS-PDFF. Low (10°)- and high (50°)-flip angle (FA) MRI-M sequences were acquired before and during the hepatobiliary phase after Gx administration; MRI-PDFF was estimated in the MRS-PDFF voxel location. Linear regression parameters (slope, intercept, average bias, R 2) were calculated for MRS-PDFF as a function of MRI-PDFF for each MRI-M sequence (pre-Gx low-FA, pre-Gx high-FA, post-Gx low-FA, post-Gx high-FA) for all patients and for patients with MRS-PDFF 
- Published
- 2017
- Full Text
- View/download PDF
14. A Pilot Comparative Study of Quantitative Ultrasound, Conventional Ultrasound, and MRI for Predicting Histology-Determined Steatosis Grade in Adult Nonalcoholic Fatty Liver Disease
- Author
-
Aiguo Han, Mark A. Valasek, Anthony Gamst, Elhamy Heba, Eduardo A. C. Costa, Rohit Loomba, Gregory Bernstein, Michael P. Andre, John W. Erdman, Tanya Wolfson, Grace Y. Lin, Claude B. Sirlin, William D. O'Brien, Marilia Fereirra, and Jeremy S. Paige
- Subjects
nonalcoholic fatty liver disease ,Male ,Biopsy ,Pilot Projects ,Phantoms ,Imaging ,030218 nuclear medicine & medical imaging ,quantitative ultrasound ,0302 clinical medicine ,Non-alcoholic Fatty Liver Disease ,Nonalcoholic fatty liver disease ,Prospective Studies ,nonalcoholic steatohepatitis ,attenuation ,quantitative imaging biomarkers ,Ultrasonography ,proton density fat fraction ,medicine.diagnostic_test ,Phantoms, Imaging ,Liver Disease ,Proton density fat fraction ,General Medicine ,Middle Aged ,Magnetic Resonance Imaging ,grading accuracy ,Quantitative ultrasound ,Nuclear Medicine & Medical Imaging ,Liver biopsy ,Biomedical Imaging ,030211 gastroenterology & hepatology ,Female ,interobserver agreement ,Radiology ,Adult ,medicine.medical_specialty ,Chronic Liver Disease and Cirrhosis ,Clinical Sciences ,Conventional ultrasound ,Imaging phantom ,Article ,03 medical and health sciences ,Clinical Research ,Predictive Value of Tests ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,backscatter ,Aged ,business.industry ,Histology ,medicine.disease ,Cross-Sectional Studies ,Steatosis ,Digestive Diseases ,business - Abstract
ObjectiveThe purpose of this study is to explore the diagnostic performance of two investigational quantitative ultrasound (QUS) parameters, attenuation coefficient and backscatter coefficient, in comparison with conventional ultrasound (CUS) and MRI-estimated proton density fat fraction (PDFF) for predicting histology-confirmed steatosis grade in adults with nonalcoholic fatty liver disease (NAFLD).Subjects and methodsIn this prospectively designed pilot study, 61 adults with histology-confirmed NAFLD were enrolled from September 2012 to February 2014. Subjects underwent QUS, CUS, and MRI examinations within 100 days of clinical-care liver biopsy. QUS parameters (attenuation coefficient and backscatter coefficient) were estimated using a reference phantom technique by two analysts independently. Three-point ordinal CUS scores intended to predict steatosis grade (1, 2, or 3) were generated independently by two radiologists on the basis of QUS features. PDFF was estimated using an advanced chemical shift-based MRI technique. Using histologic examination as the reference standard, ROC analysis was performed. Optimal attenuation coefficient, backscatter coefficient, and PDFF cutoff thresholds were identified, and the accuracy of attenuation coefficient, backscatter coefficient, PDFF, and CUS to predict steatosis grade was determined. Interobserver agreement for attenuation coefficient, backscatter coefficient, and CUS was analyzed.ResultsCUS had 51.7% grading accuracy. The raw and cross-validated steatosis grading accuracies were 61.7% and 55.0%, respectively, for attenuation coefficient, 68.3% and 68.3% for backscatter coefficient, and 76.7% and 71.3% for MRI-estimated PDFF. Interobserver agreements were 53.3% for CUS (κ = 0.61), 90.0% for attenuation coefficient (κ = 0.87), and 71.7% for backscatter coefficient (κ = 0.82) (p < 0.0001 for all).ConclusionPreliminary observations suggest that QUS parameters may be more accurate and provide higher interobserver agreement than CUS for predicting hepatic steatosis grade in patients with NAFLD.
- Published
- 2017
- Full Text
- View/download PDF
15. Cross-sectional correlation between hepatic R2* and proton density fat fraction (PDFF) in children with hepatic steatosis
- Author
-
Adrija, Mamidipalli, Gavin, Hamilton, Paul, Manning, Cheng William, Hong, Charlie C, Park, Tanya, Wolfson, Jonathan, Hooker, Elhamy, Heba, Alexandra, Schlein, Anthony, Gamst, Janis, Durelle, Melissa, Paiz, Michael S, Middleton, Jeffrey B, Schwimmer, and Claude B, Sirlin
- Subjects
Adult ,Male ,Iron Overload ,Adolescent ,Magnetic Resonance Imaging ,Article ,Young Adult ,Cross-Sectional Studies ,Adipose Tissue ,Liver ,Non-alcoholic Fatty Liver Disease ,Image Interpretation, Computer-Assisted ,Humans ,Female ,Prospective Studies ,Child - Abstract
To determine the relationship between hepatic proton density fat fraction (PDFF) and R2* in vivo.In this Health Insurance Portability and Accountability Act (HIPAA)-compliant, Institutional Review Board (IRB)-approved, cross-sectional study, we conducted a secondary analysis of 3T magnetic resonance imaging (MRI) exams performed as part of prospective research studies in children in whom conditions associated with iron overload were excluded clinically. Each exam included low-flip-angle, multiecho magnitude (-M) and complex (-C) based chemical-shift-encoded MRI techniques with spectral modeling of fat to generate hepatic PDFF and R2* parametric maps. For each technique and each patient, regions of interest were placed on the maps in each of the nine Couinaud segments, and composite whole-liver PDFF and R2* values were calculated. Pearson's correlation coefficients between PDFF and R2* were computed for each MRI technique. Correlations were compared using Steiger's test.In all, 184 children (123 boys, 61 girls) were included in this analysis. PDFF estimated by MRI-M and MRI-C ranged from 1.1-35.4% (9.44 ± 8.76) and 2.1-38.1% (10.1 ± 8.7), respectively. R2* estimated by MRI-M and MRI-C ranged from 32.6-78.7 sHepatic PDFF and R2* are strongly correlated with each other in vivo. This relationship was observed using two different MRI techniques.2 Technical Efficacy: Stage 1 J. Magn. Reson. Imaging 2018;47:418-424.
- Published
- 2017
16. Assessment of treatment response in nonalcoholic steatohepatitis using advanced magnetic resonance imaging measures
- Author
-
Claude B. Sirlin, Gavin Hamilton, Mark A. Valasek, Steven C. Lin, Elhamy Heba, Rohit Loomba, O. Lunde, Ricki Bettencourt, and Grace Y. Lin
- Subjects
Adult ,Male ,medicine.medical_specialty ,Treatment response ,Pathology ,Liver volume ,Placebo ,Gastroenterology ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Double-Blind Method ,Non-alcoholic Fatty Liver Disease ,Internal medicine ,Secondary analysis ,medicine ,Humans ,Pharmacology (medical) ,Longitudinal Studies ,Diet, Fat-Restricted ,Aged ,Hepatology ,medicine.diagnostic_test ,business.industry ,Anticholesteremic Agents ,Magnetic resonance imaging ,Non alcoholic ,Middle Aged ,medicine.disease ,Ezetimibe ,Magnetic Resonance Imaging ,Cross-Sectional Studies ,Treatment Outcome ,030211 gastroenterology & hepatology ,Female ,Steatosis ,Steatohepatitis ,business ,Biomarkers - Abstract
SummaryBackground Magnetic resonance imaging-derived measures of liver fat and volume are emerging as accurate, non-invasive imaging biomarkers in non-alcoholic steatohepatitis (NASH). Little is known about these measures in relation to histology longitudinally. Aim To examine any relationship between MRI-derived proton-density fat-fraction (PDFF), total liver volume (TLV), total liver fat index (TLFI), vs. histology in a NASH trial. Methods This is a secondary analysis of a 24-week randomised, double-blind, placebo-controlled trial of 50 patients with biopsy-proven NASH randomised to oral ezetimibe 10 mg daily (n = 25) vs. placebo (n = 25). Baseline and post-treatment anthropometrics, biochemical profiling, MRI and biopsies were obtained. Results Baseline mean PDFF correlated strongly with TLFI (Spearman's ρ = 0.94, n = 45, P < 0.0001) and had good correlation with TLV (ρ = 0.57, n = 45, P < 0.0001). Mean TLV correlated strongly with TLFI (ρ = 0.78, n = 45, P < 0.0001). After 24 weeks, PDFF remained strongly correlated with TLFI (ρ = 0.94, n = 45, P < 0.0001), maintaining good correlation with TLV (ρ = 0.51, n = 45, P = 0.0004). TLV remained strongly correlated with TLFI (ρ = 0.74, n = 45, P < 0.0001). Patients with Grade 1 vs. 3 steatosis had lower PDFF, TLV, and TLFI (P < 0.0001, P = 0.0003, P < 0.0001 respectively). Regression analysis of changes in MRI-PDFF vs. TLV indicates that 10% reduction in MRI-PDFF predicts 257 mL reduction in TLV. Conclusions The MRI-PDFF and TLV strongly correlated with TLFI. Decreases in steatosis were associated with an improvement in hepatomegaly. Lower values of these measures reflect lower histologic steatosis grades. MRI-derived measures of liver fat and volume may be used as dynamic and more responsive imaging biomarkers in a NASH trial, than histology.
- Published
- 2017
17. Agreement Between Magnetic Resonance Imaging Proton Density Fat Fraction Measurements and Pathologist-Assigned Steatosis Grades of Liver Biopsies From Adults With Nonalcoholic Steatohepatitis
- Author
-
David E. Kleiner, Kumar Sandrasegaran, Mustafa R. Bashir, Brent A. Neuschwander-Tetri, Elhamy Heba, Catherine A. Hooker, Arun J. Sanyal, Joel E. Lavine, Rohit Loomba, Michael S. Middleton, Elizabeth M. Brunt, Edward Doo, Kathryn J. Fowler, Claude B. Sirlin, and Mark L. Van Natta
- Subjects
Adult ,Male ,Pathology ,medicine.medical_specialty ,Biopsy ,Placebo ,Chenodeoxycholic Acid ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Non-alcoholic Fatty Liver Disease ,Nonalcoholic fatty liver disease ,medicine ,Humans ,Single-Blind Method ,Adiposity ,Hepatology ,medicine.diagnostic_test ,Receiver operating characteristic ,business.industry ,Gastroenterology ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Confidence interval ,Liver ,ROC Curve ,Liver biopsy ,Area Under Curve ,030211 gastroenterology & hepatology ,Female ,Steatosis ,business - Abstract
Background & Aims We assessed the diagnostic performance of magnetic resonance imaging (MRI) proton density fat fraction (PDFF) in grading hepatic steatosis and change in hepatic steatosis in adults with nonalcoholic steatohepatitis (NASH) in a multi-center study, using central histology as reference. Methods We collected data from 113 adults with NASH participating in a multi-center, randomized, double-masked, placebo-controlled, phase 2b trial to compare the efficacy cross-sectionally and longitudinally of obeticholic acid vs placebo. Hepatic steatosis was assessed at baseline and after 72 weeks of obeticholic acid or placebo by liver biopsy and MRI (scanners from different manufacturers, at 1.5T or 3T). We compared steatosis estimates by PDFF vs histology. Histologic steatosis grade was scored in consensus by a pathology committee. Cross-validated receiver operating characteristic (ROC) analyses were performed. Results At baseline, 34% of subjects had steatosis grade 0 or 1, 39% had steatosis grade 2, and 27% had steatosis grade 3; corresponding mean PDFF values were 9.8%±3.7%, 18.1%±4.3%, and 30.1%±8.1%. PDFF classified steatosis grade 0–1 vs 2–3 with an area under the ROC curve (AUROC) of 0.95 (95% CI, 0.91–0.98), and grade 0–2 vs grade 3 steatosis with an AUROC of 0.96 (95% CI, 0.93–0.99). PDFF cut-off values at 90% specificity were 16.3% for grades 2–3 and 21.7% for grade 3, with corresponding sensitivities of 83% and 84%. After 72 weeks' of obeticholic vs placebo, 42% of subjects had a reduced steatosis grade (mean reduction in PDFF from baseline of 7.4%±8.7%), 49% had no change in steatosis grade (mean increase in PDFF from baseline of 0.3%±6.3%), and 9% had an increased steatosis grade (mean increase in PDFF from baseline of 7.7%±6.0%). PDFF change identified subjects with reduced steatosis grade with an AUROC of 0.81 (95% CI, 0.71–0.91) and increased steatosis grade with an AUROC of 0.81 (95% CI, 0.63–0.99). A PDFF reduction of 5.15% identified subjects with reduced steatosis grade with 90% specificity and 58% sensitivity, whereas a PDFF increase of 5.6% identified those with increased steatosis grade with 90% specificity and 57% sensitivity. Conclusions Based on data from a phase 2 randomized controlled trial of adults with NASH, PDFF estimated by MRI scanners of different field strength and at different sites, accurately classifies grades and changes in hepatic steatosis when histologic analysis of biopsies is used as a reference.
- Published
- 2016
18. Su1532 - Effect on Accuracy of a Quantitative Imaging Assessment Biomarker Metric for Mri-Estimated Proton Density Fat Fraction
- Author
-
Adrija Mamidipalli, Rohit Loomba, Elhamy Heba, Claude B. Sirlin, Michael S. Middleton, Jennifer Y Cui, Walter C. Henderson, and Gavin Hamilton
- Subjects
Quantitative imaging ,Nuclear magnetic resonance ,Hepatology ,Chemistry ,Gastroenterology ,Biomarker (medicine) ,Proton density fat fraction ,Metric (unit) - Published
- 2018
- Full Text
- View/download PDF
19. Feasibility of and agreement between MR imaging and spectroscopic estimation of hepatic proton density fat fraction in children with known or suspected nonalcoholic fatty liver disease
- Author
-
Takeshi Yokoo, Claude B. Sirlin, Elhamy Heba, Michael S. Middleton, Michael E. Schroeder, Jonathan Hooker, Anthony Gamst, Emil Achmad, Gavin Hamilton, Christopher Changchien, Joel E. Lavine, Tanya Wolfson, and Jeffrey B. Schwimmer
- Subjects
Male ,Magnetic Resonance Spectroscopy ,Steatosis ,PDFF ,Nuclear magnetic resonance ,Non-alcoholic Fatty Liver Disease ,Nonalcoholic fatty liver disease ,Child ,Pediatric ,Radiological and Ultrasound Technology ,medicine.diagnostic_test ,Liver Disease ,Gastroenterology ,Proton density fat fraction ,General Medicine ,Nuclear magnetic resonance spectroscopy ,Magnetic Resonance Imaging ,Nuclear Medicine & Medical Imaging ,Liver ,Biomedical Imaging ,Female ,Radiology ,Protons ,Artifacts ,MRI ,medicine.medical_specialty ,MRS ,Adolescent ,Urology ,Chronic Liver Disease and Cirrhosis ,Clinical Sciences ,Article ,Clinical Research ,Internal medicine ,NAFLD ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Retrospective Studies ,business.industry ,Reproducibility of Results ,Magnetic resonance imaging ,Hepatology ,equipment and supplies ,medicine.disease ,Mr imaging ,Cross-Sectional Studies ,Feasibility Studies ,business ,Digestive Diseases ,human activities - Abstract
© 2015, Springer Science+Business Media New York. Purpose: To assess feasibility of and agreement between magnetic resonance imaging (MRI) and magnetic resonance spectroscopy (MRS) for estimating hepatic proton density fat fraction (PDFF) in children with known or suspected nonalcoholic fatty liver disease (NAFLD). Materials and methods: Children were included in this study from two previous research studies in each of which three MRI and three MRS acquisitions were obtained. Sequence acceptability, and MRI- and MRS-estimated PDFF were evaluated. Agreement of MRI- with MRS-estimated hepatic PDFF was assessed by linear regression and Bland–Altman analysis. Age, sex, BMI-Z score, acquisition time, and artifact score effects on MRI- and MRS-estimated PDFF agreement were assessed by multiple linear regression. Results: Eighty-six children (61 boys and 25 girls) were included in this study. Slope and intercept from regressing MRS-PDFF on MRI-PDFF were 0.969 and 1.591%, respectively, and the Bland–Altman bias and 95% limits of agreement were 1.17% ± 2.61%. MRI motion artifact score was higher in boys than girls (by 0.21, p = 0.021). Higher BMI-Z score was associated with lower agreement between MRS and MRI (p = 0.045). Conclusion: Hepatic PDFF estimation by both MRI and MRS is feasible, and MRI- and MRS-estimated PDFF agree closely in children with known or suspected NAFLD.
- Published
- 2015
- Full Text
- View/download PDF
20. Diagnostic per-patient accuracy of an abbreviated hepatobiliary phase gadoxetic acid-enhanced MRI for hepatocellular carcinoma surveillance
- Author
-
Robert M. Marks, Anthony Gamst, An Tang, Elhamy Heba, Mustafa R. Bashir, Tanya Wolfson, Andrew F. Ryan, and Claude B. Sirlin
- Subjects
Gadolinium DTPA ,Male ,medicine.medical_specialty ,Gadoxetic acid ,Carcinoma, Hepatocellular ,Contrast Media ,Cohen's kappa ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Reference standards ,Aged ,Retrospective Studies ,Retrospective review ,business.industry ,Liver Neoplasms ,Reproducibility of Results ,General Medicine ,Middle Aged ,medicine.disease ,Predictive value ,Magnetic Resonance Imaging ,Cross-Sectional Studies ,Hepatocellular carcinoma ,Population Surveillance ,Hepatobiliary phase ,Female ,Radiology ,business ,medicine.drug - Abstract
OBJECTIVE. The purpose of this study is to evaluate the per-patient diagnostic performance of an abbreviated gadoxetic acid-enhanced MRI protocol for hepatocellular carcinoma (HCC) surveillance. MATERIALS AND METHODS. A retrospective review identified 298 consecutive patients at risk for HCC enrolled in a gadoxetic acid-enhanced MRI-based HCC surveillance program. For each patient, the first gadoxetic acid-enhanced MRI was analyzed. To simulate an abbreviated protocol, two readers independently read two image sets per patient: set 1 consisted of T1-weighted 20-minute hepatobiliary phase and T2-weighted single-shot fast spin-echo (SSFSE) images; set 2 included diffusion-weighted imaging (DWI) and images from set 1. Image sets were scored as positive or negative according to the presence of at least one nodule 10 mm or larger that met the predetermined criteria. Agreement was assessed using Cohen kappa statistics. A composite reference standard was used to determine the diagnostic performance of each image set for each reader. RESULTS. Interreader agreement was substantial for both image sets (κ = 0.72 for both) and intrareader agreement was excellent (κ = 0.97-0.99). Reader performance for image set 1 was sensitivity of 85.7% for reader A and 79.6% for reader B, specificity of 91.2% for reader A and 95.2% for reader B, and negative predictive value of 97.0% for reader A and 96.0% for reader B. Reader performance for image set 2 was nearly identical, with only one of 298 examinations scored differently on image set 2 compared with set 1. CONCLUSION. An abbreviated MRI protocol consisting of T2-weighted SSFSE and gadoxetic acid-enhanced hepatobiliary phase has high negative predictive value and may be an acceptable method for HCC surveillance. The inclusion of a DWI sequence did not significantly alter the diagnostic performance of the abbreviated protocol.
- Published
- 2015
21. Accuracy of multiecho magnitude-based MRI (M-MRI) for estimation of hepatic proton density fat fraction (PDFF) in children
- Author
-
Kevin A, Zand, Amol, Shah, Elhamy, Heba, Tanya, Wolfson, Gavin, Hamilton, Jessica, Lam, Joshua, Chen, Jonathan C, Hooker, Anthony C, Gamst, Michael S, Middleton, Jeffrey B, Schwimmer, and Claude B, Sirlin
- Subjects
Adult ,Male ,Magnetic Resonance Spectroscopy ,Adolescent ,Reproducibility of Results ,Magnetic Resonance Imaging ,Article ,Fatty Liver ,Young Adult ,Cross-Sectional Studies ,Liver ,Humans ,Female ,Protons ,Child ,Retrospective Studies - Abstract
To assess accuracy of magnitude-based magnetic resonance imaging (M-MRI) in children to estimate hepatic proton density fat fraction (PDFF) using two to six echoes, with magnetic resonance spectroscopy (MRS) -measured PDFF as a reference standard.This was an IRB-approved, HIPAA-compliant, single-center, cross-sectional, retrospective analysis of data collected prospectively between 2008 and 2013 in children with known or suspected nonalcoholic fatty liver disease (NAFLD). Two hundred eighty-six children (8-20 [mean 14.2 ± 2.5] years; 182 boys) underwent same-day MRS and M-MRI. Unenhanced two-dimensional axial spoiled gradient-recalled-echo images at six echo times were obtained at 3T after a single low-flip-angle (10°) excitation with ≥ 120-ms recovery time. Hepatic PDFF was estimated using the first two, three, four, five, and all six echoes. For each number of echoes, accuracy of M-MRI to estimate PDFF was assessed by linear regression with MRS-PDFF as reference standard. Accuracy metrics were regression intercept, slope, average bias, and R(2) .MRS-PDFF ranged from 0.2-40.4% (mean 13.1 ± 9.8%). Using three to six echoes, regression intercept, slope, and average bias were 0.46-0.96%, 0.99-1.01, and 0.57-0.89%, respectively. Using two echoes, these values were 2.98%, 0.97, and 2.72%, respectively. R(2) ranged 0.98-0.99 for all methods.Using three to six echoes, M-MRI has high accuracy for hepatic PDFF estimation in children.
- Published
- 2014
22. Imaging Techniques for the Assessment of Ectopic Fat in Liver and Skeletal Muscle
- Author
-
Claude B. Sirlin, Elhamy Heba, Michael S. Middleton, and Gavin Hamilton
- Subjects
Noninvasive imaging ,medicine.diagnostic_test ,business.industry ,Ultrasound ,Proton density fat fraction ,Skeletal muscle ,Magnetic resonance imaging ,Computed tomography ,medicine.anatomical_structure ,Liver fat ,medicine ,Nuclear medicine ,business ,Fat fraction - Abstract
The prevalence of obesity worldwide has prompted the development of noninvasive imaging techniques to monitor excessive accumulation of fat. Noninvasive methods to quantify liver and skeletal muscle fat may be used to assess efficacy and safety endpoints in drug development. Multiple imaging methods have been proposed to measure the amount fat in the liver. The leading methods for quantifying liver fat are magnetic resonance imaging (MRI) and magnetic resonance spectroscopy (MRS), as these techniques are capable of estimating the hepatic proton density fat fraction (PDFF), a generalizable, standardized measurement that is reproducible across sites and scanner manufacturers, models, and software. Other techniques, such as computed tomography, ultrasound, and MR techniques that measure uncorrected signal fat fraction rather than PDFF, are confounded by biological, physical, or technical factors. In muscle, the only noninvasive method to gain widespread acceptance is MRS as it is the only technique that can differentiate the fat that accumulates inside skeletal muscle cells (intramyocellular lipid (IMCL)) from the fat that accumulates between skeletal muscles and between skeletal muscle cells.
- Published
- 2014
- Full Text
- View/download PDF
23. Noninvasive Diagnosis of Nonalcoholic Fatty Liver Disease and Quantification of Liver Fat Using a New Quantitative Ultrasound Technique
- Author
-
Elhamy Heba, Rohit Loomba, Brandon Ang, William D. O'Brien, Tanya Wolfson, Anthony Gamst, Steven C. Lin, Aiguo Han, Claude B. Sirlin, Michael P. Andre, and John W. Erdman
- Subjects
Adult ,Male ,medicine.medical_specialty ,Population ,Chronic liver disease ,California ,Ultrasound research interface ,Non-alcoholic Fatty Liver Disease ,Nonalcoholic fatty liver disease ,medicine ,Animals ,Humans ,Prospective Studies ,education ,Aged ,Ultrasonography ,Aged, 80 and over ,education.field_of_study ,Hepatology ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Fatty Liver ,Cross-Sectional Studies ,Liver ,Liver biopsy ,Female ,Radiology ,Steatosis ,business ,Body mass index - Abstract
Liver biopsy analysis is the standard method used to diagnose nonalcoholic fatty liver disease (NAFLD). Advanced magnetic resonance imaging is a noninvasive procedure that can accurately diagnose and quantify steatosis, but is expensive. Conventional ultrasound is more accessible but identifies steatosis with low levels of sensitivity, specificity, and quantitative accuracy, and results vary among technicians. A new quantitative ultrasound (QUS) technique can identify steatosis in animal models. We assessed the accuracy of QUS in the diagnosis and quantification of hepatic steatosis, comparing findings with those from magnetic resonance imaging proton density fat fraction (MRI-PDFF) analysis as a reference.We performed a prospective, cross-sectional analysis of a cohort of adults (N = 204) with NAFLD (MRI-PDFF, ≥5%) and without NAFLD (controls). Subjects underwent MRI-PDFF and QUS analyses of the liver on the same day at the University of California, San Diego, from February 2012 through March 2014. QUS parameters and backscatter coefficient (BSC) values were calculated. Patients were assigned randomly to training (n = 102; mean age, 51 ± 17 y; mean body mass index, 31 ± 7 kg/m(2)) and validation (n = 102; mean age, 49 ± 17 y; body mass index, 30 ± 6 kg/m(2)) groups; 69% of patients in each group had NAFLD.BSC (range, 0.00005-0.25 1/cm-sr) correlated with MRI-PDFF (Spearman ρ = 0.80; P.0001). In the training group, the BSC analysis identified patients with NAFLD with an area under the curve value of 0.98 (95% confidence interval, 0.95-1.00; P.0001). The optimal BSC cut-off value identified patients with NAFLD in the training and validation groups with 93% and 87% sensitivity, 97% and 91% specificity, 86% and 76% negative predictive values, and 99% and 95% positive predictive values, respectively.QUS measurements of BSC can accurately diagnose and quantify hepatic steatosis, based on a cross-sectional analysis that used MRI-PDFF as the reference. With further validation, QUS could be an inexpensive, widely available method to screen the general or at-risk population for NAFLD.
- Published
- 2014
24. Accurate diagnosis of nonalcoholic fatty liver disease in human participants via quantitative ultrasound
- Author
-
Rohit Loomba, Claude B. Sirlin, William D. O'Brien, Michael P. Andre, Elhamy Heba, Aiguo Han, John W. Erdman, and Jonathan Hooker
- Subjects
medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,nutritional and metabolic diseases ,Disease ,medicine.disease ,Chronic liver disease ,digestive system ,digestive system diseases ,Liver disease ,Diabetes mellitus ,Liver biopsy ,Nonalcoholic fatty liver disease ,medicine ,Radiology ,Steatosis ,business ,Grading (tumors) - Abstract
Nonalcoholic fatty liver disease (NAFLD) is the most common cause of chronic liver disease in the United States, affects 30% of adult Americans, may progress to nonalcoholic steatohepatitis (NASH) and end-stage liver disease, and is a risk factor for diabetes and cardiovascular disease. The diagnosis, grading, and staging of NAFLD currently is based on liver biopsy examination with histologic assessment. Noninvasive image-based methods to evaluate the liver in adults with NAFLD are urgently needed. We developed a quantitative ultrasound (QUS) method that in animal studies shows promise for detection and quantification of liver fat content. The current study's contribution is to extend the work to human participants by assessing the accuracy of backscatter coefficient and attenuation coefficient for detection of hepatic steatosis in a cohort of adult participants with NAFLD and non-NAFLD controls. QUS parameters measured using routine clinical US scanners show promise for detecting and perhaps grading NAFLD.
- Published
- 2014
- Full Text
- View/download PDF
25. Association between novel MRI-estimated pancreatic fat and liver histology-determined steatosis and fibrosis in non-alcoholic fatty liver disease
- Author
-
Claude B. Sirlin, Michael R. Peterson, Elhamy Heba, David A. Brenner, Rohit Loomba, and Niraj S. Patel
- Subjects
Adult ,Liver Cirrhosis ,Male ,medicine.medical_specialty ,Biopsy ,Gastroenterology ,Severity of Illness Index ,Article ,Body Mass Index ,Fibrosis ,Non-alcoholic Fatty Liver Disease ,Predictive Value of Tests ,Internal medicine ,medicine ,Humans ,Pharmacology (medical) ,Pancreas ,Adiposity ,Hepatology ,medicine.diagnostic_test ,business.industry ,Fatty liver ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Fatty Liver ,medicine.anatomical_structure ,Cross-Sectional Studies ,Liver biopsy ,Disease Progression ,Biomarker (medicine) ,Female ,Steatosis ,business ,Body mass index - Abstract
Summary Background Ectopic fat deposition in the pancreas and its association with hepatic steatosis have not previously been examined in patients with biopsy-proven non-alcoholic fatty liver disease (NAFLD). Aim To quantify pancreatic fat using a novel magnetic resonance imaging (MRI) technique and determine whether it is associated with hepatic steatosis and/or fibrosis in patients with NAFLD. Methods This is a cross-sectional study including 43 adult patients with biopsy-proven NAFLD who underwent clinical evaluation, biochemical testing and MRI. The liver biopsy assessment was performed using the NASH-CRN histological scoring system, and liver and pancreas fat quantification was performed using a novel, validated MRI biomarker; the proton density fat fraction. Results The average MRI-determined pancreatic fat in patients with NAFLD was 8.5% and did not vary significantly between head, body, and tail of the pancreas. MRI-determined pancreatic fat content increased significantly with increasing histology-determined hepatic steatosis grade; 4.6% in grade 1; 7.7% in grade 2; 13.0% in grade 3 (P = 0.004) respectively. Pancreatic fat content was lower in patients with histology-determined liver fibrosis than in those without fibrosis (11.2% in stage 0 fibrosis vs. 5.8% in stage 1–2 fibrosis, and 6.9% in stage 3-4 fibrosis, P = 0.013). Pancreatic fat did not correlate with age, body mass index or diabetes status. Conclusions In patients with NAFLD, increased pancreatic fat is associated with hepatic steatosis. However, liver fibrosis is inversely associated with pancreatic fat content. Further studies are needed to determine underlying mechanisms to understand if pancreatic steatosis affects progression of NAFLD.
- Published
- 2012
26. Sa1046 Differential Effects of Very Low Calorie Diet on Body Weight, Liver Fat and Liver Volume in Obese Adults Prior to Weight Loss Surgery
- Author
-
Rashmi Agni, Guilherme M. Campos, Jeffrey B. Schwimmer, Michael Garren, Catherine A. Hooker, Jessica Lam, Santiago Horgan, Nathan S. Artz, Tanya Wolfson, Gavin Hamilton, Elhamy Heba, Anthony Gamst, Hannah I. Awai, Garth R. Jacobsen, Claude B. Sirlin, Scott B. Reeder, Jacob A. Greenberg, and Diego Hernando
- Subjects
medicine.medical_specialty ,Hepatology ,business.industry ,food.diet ,Liver volume ,Gastroenterology ,Body weight ,Differential effects ,Very low calorie diet ,Endocrinology ,food ,Weight loss ,Internal medicine ,Liver fat ,medicine ,medicine.symptom ,Weight Loss Surgery ,business - Published
- 2014
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.