188 results on '"Einar Sagstuen"'
Search Results
2. Visible Light Driven Photocatalytic Decolorization and Disinfection of Water Employing Reduced TiO2 Nanopowders
- Author
-
Truls Norby, Xiaolan Kang, Einar Sagstuen, Athanasios Chatzitakis, Augustinas Galeckas, C. Bazioti, Ioannis Poulios, and Chrysanthi Berberidou
- Subjects
Materials science ,Portable water purification ,02 engineering and technology ,010402 general chemistry ,lcsh:Chemical technology ,01 natural sciences ,Catalysis ,solar light ,lcsh:Chemistry ,chemistry.chemical_compound ,decolorization and disinfection of water ,Geobacillus stearothermophilus ,lcsh:TP1-1185 ,Physical and Theoretical Chemistry ,Malachite green ,Photodegradation ,metallic oxide nanoparticles ,advanced oxidation processes ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,chemistry ,Chemical engineering ,lcsh:QD1-999 ,defect-engineered TiO2 ,Photocatalysis ,Degradation (geology) ,0210 nano-technology ,photocatalysis ,Visible spectrum - Abstract
Defect-engineering of TiO2 can have a major impact on its photocatalytic properties for the degradation of persisting and non-biodegradable pollutants. Herein, a series of intrinsic and extrinsic defects are induced by post annealing of crystalline TiO2 under different reducing atmospheres. A detailed optoelectronic characterization sheds light on the key characteristics of the defect-engineered TiO2 nanopowders that are linked to the photocatalytic performance of the prepared photocatalysts. The photodegradation of a model dye, malachite green, as well as the inactivation of bacterial endospores of the Geobacillus stearothermophilus species were studied in the presence of the developed catalysts under visible light illumination. Our results indicate that a combination of certain defects is necessary for the improvement of the photocatalytic process for water purification and disinfection under visible light.
- Published
- 2021
3. Radicals in Ammonium Tartrate at 295 K by X-Radiation: Revised Radical Structures by EMR and DFT Analyses
- Author
-
Einar Sagstuen, Veronika Kugler, Eli Olaug Hole, and Anders Lund
- Subjects
Inorganic Chemistry ,Oorganisk kemi ,Radiation ,Electron paramagnetic resonance ,Electron magnetic resonance ,Ammonium tartrate ,Radiation induced radicals ,Ionizing radiation ,EPR dosimetry ,Periodic DFT - Abstract
The simple amino acid l-alpha-alanine (ala) in polycrystalline form was among the first substances to be proposed and subsequently developed for Electron Paramagnetic Resonance (EPR)-based solid state radiation dosimetry. One disadvantage with ala is a relatively low sensitivity for doses below a few gray (Gy) which is a dose range of particular interest in medical, accident and environmental applications. A number of other compounds have been screened and some of these have shown a better sensitivity to radiation exposure than ala, in some cases up to a factor of 7-8. In particular ammonium tartrate (AT) and lithium formate (LiFo) have been taken into practical use. The present work was initially aimed to investigate the low-temperature radical products in AT, and the reactions leading to the product of dosimetric interest at room temperature. As a part of these studies, the previously characterized major room temperature radical product was re-investigated using single crystal electron magnetic resonance (EMR) techniques combined with periodic density functional theory (DFT) -type quantum chemical calculations. Surprisingly, this study showed that the molecular structure of the dominant radical at room temperature is somewhat different from that previously proposed. Furthermore, a second room temperature radical, previously not well characterized, was carefully investigated and three hyperfine coupling tensors were determined. These three tensors were sufficient to simulate all experimental observations for the second radical but not alone sufficient to permit an unambiguous molecular structure of the defect to be determined. It appears that the EPR resonance from this radical does not influence the dosimetric potential of AT.
- Published
- 2021
- Full Text
- View/download PDF
4. Characterization of the NiSO4 site on a NiSO4-ReOx/γ-Al2O3 catalyst for tandem conversion of ethylene to propylene
- Author
-
Lu Li, Sachin Chavan, Yadolah Ganjkhanlou, Elena Groppo, Einar Sagstuen, Silvia Bordiga, Unni Olsbye, and Klaus-J. Jens
- Subjects
Process Chemistry and Technology ,Catalysis - Published
- 2022
- Full Text
- View/download PDF
5. Determination of the g-, hyperfine coupling- and zero-field splitting tensors in EPR and ENDOR using extended Matlab codes
- Author
-
Anders Lund, Freddy Callens, and Einar Sagstuen
- Subjects
Nuclear and High Energy Physics ,Biophysics ,Zero field splitting ,010402 general chemistry ,01 natural sciences ,Biochemistry ,030218 nuclear medicine & medical imaging ,law.invention ,Crystal (programming language) ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Software ,law ,Linear regression ,Electron paramagnetic resonance ,MATLAB ,computer.programming_language ,Physics ,Zeeman effect ,business.industry ,Plane (geometry) ,EPR ,ENDOR ,Single crystals ,Data analysis ,MatLab open code ,Coupling tensors ,Medicinsk bildbehandling ,Condensed Matter Physics ,0104 chemical sciences ,Computational physics ,Medical Image Processing ,symbols ,business ,computer - Abstract
The analysis of single crystal electron magnetic resonance (EMR) data has traditionally been performed using software in programming languages that are difficult to update, are not easily available, or are obsolete. By using a modern script-language with tools for the analysis and graphical display of the data, three MatLab (R) codes were prepared to compute the g, zero-field splitting (zfs) and hyperfine coupling (hfc) tensors from roadmaps obtained by EPR or ENDOR measurements in three crystal planes. Schonlands original method was used to compute the g- and hfc-tensors by a least-squares fit to the experimental data in each plane. The modifications required for the analysis of the zfs of radical pairs with S = 1 were accounted for. A non-linear fit was employed in a second code to obtain the hfc-tensor from EPR measurements, taking the nuclear Zeeman interaction of an I = 1/2 nucleus into account. A previously developed method to calculate the g- and hfc -tensors by a simultaneous linear fit to all data was used in the third code. The validity of the methods was examined by comparison with results obtained experimentally, and by roadmaps computed by exact diagonalization. The probable errors were estimated using functions for regression analysis available in MatLab. The software will be published at https://doi.org/10.17632/ps24sw95gz.1, Input and output examples presented in this work can also be downloaded from https://old.liu.se/simarc/downloads?l=en. (C) 2021 The Author(s). Published by Elsevier Inc. Funding Agencies|Linkoping University; Ghent UniversityGhent University; University of Oslo
- Published
- 2020
6. Oxidative power of aqueous non-irradiated TiO 2 -H 2 O 2 suspensions: Methylene blue degradation and the role of reactive oxygen species
- Author
-
Einar Sagstuen, David Wiedmer, Håvard J. Haugen, Ken Welch, and Hanna Tiainen
- Subjects
chemistry.chemical_classification ,Reactive oxygen species ,Aqueous solution ,Process Chemistry and Technology ,Radical ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,Oxygen ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Zeta potential ,0210 nano-technology ,Hydrogen peroxide ,Methylene blue ,General Environmental Science - Abstract
In the present study, the degradation of methylene blue in non-irradiated TiO2-H2O2 suspensions was investigated. Five commercially available catalysts were characterized (BET surface area, zeta potential, hydrodynamic diameter) and their oxidative power was assessed by means of the degradation of methylene blue. A subsequent EPR study was made to verify and identify potential oxidative radicals. The results showed that all suspensions could degrade methylene blue significantly stronger compared to hydrogen peroxide alone. A broad variation between the different catalysts in their capability to adsorb dye molecules was found which was essential for decomposition of methylene blue in darkness. The highest degradation rate of all samples was found for Degussa P25 at neutral pH. EPR studies of this sample verified the presence of oxygen centred radicals namely hydroxyl ( OH) and superoxide radicals (O2− / OOH). Non-irradiated TiO2-H2O2 systems show great potential not only in dye removal applications but also in the field of disinfection where low concentrations of hydrogen peroxide are required and irradiation may not be feasible.
- Published
- 2016
- Full Text
- View/download PDF
7. In Quest of the Alanine R3 Radical: Multivariate EPR Spectral Analyses of X‑Irradiated Alanine in the Solid State
- Author
-
Einar Sagstuen, Eirik Ogner Jåstad, Eirik Malinen, Eli O. Hole, Kathleen Villeneuve, Turid Torheim, Knut Kvaal, and Cecilia M. Futsaether
- Subjects
Alanine ,Dosimeter ,Chemistry ,Radical ,010401 analytical chemistry ,Analytical chemistry ,Resonance ,010402 general chemistry ,01 natural sciences ,Spectral line ,0104 chemical sciences ,law.invention ,law ,Physical chemistry ,Crystallite ,Irradiation ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance - Abstract
The amino acid L-α-alanine is the most commonly used material for solidstate electron paramagnetic resonance (EPR) dosimetry, due to the formation of highly stable radicals upon irradiation, with yields proportional to the radiation dose. Two major alanine radical components designated R1 and R2 have previously been uniquely characterized from EPR and electron−nuclear double resonance (ENDOR) studies as well as from quantum chemical calculations. There is also convincing experimental evidence of a third minor radical component R3, and a tentative radical structure has been suggested, even though no well-defined spectral signature has been observed experimentally. In the present study, temperature dependent EPR spectra of X-ray irradiated polycrystalline alanine were analyzed using five multivariate methods in further attempts to understand the composite nature of the alanine dosimeter EPR spectrum. Principal component analysis (PCA), maximum likelihood common factor analysis (MLCFA), independent component analysis (ICA), self-modeling mixture analysis (SMA), and multivariate curve resolution (MCR) were used to extract pure radical spectra and their fractional contributions from the experimental EPR spectra. All methods yielded spectral estimates resembling the established R1 spectrum. Furthermore, SMA and MCR consistently predicted both the established R2 spectrum and the shape of the R3 spectrum. The predicted shape of the R3 spectrum corresponded well with the proposed tentative spectrum derived from spectrum simulations. Thus, results from two independent multivariate data analysis techniques strongly support the previous evidence that three radicals are indeed present in irradiated alanine samples. This research was first published in the Journal of Physical Chemistry A. © 2017 American Chemical Society
- Published
- 2017
8. On the identity of the last known stable radical in X-irradiated sucrose
- Author
-
Hendrik De Cooman, Freddy Callens, Einar Sagstuen, Jevgenij Kusakovskij, and Henk Vrielinck
- Subjects
PARAMAGNETIC-RESONANCE ,Radical ,MINIMUM ENERGY PATHS ,General Physics and Astronomy ,02 engineering and technology ,Radiation chemistry ,010402 general chemistry ,01 natural sciences ,SADDLE-POINTS ,DENSITY-FUNCTIONAL THEORY ,Computational chemistry ,Molecule ,Irradiation ,Physical and Theoretical Chemistry ,density functional theory ,Bond cleavage ,FRUCTOSE SINGLE-CRYSTALS ,SPACE GAUSSIAN PSEUDOPOTENTIALS ,Chemistry ,Hydrogen bond ,sucrose ,radicals ,021001 nanoscience & nanotechnology ,ELECTRON MAGNETIC-RESONANCE ,0104 chemical sciences ,ELASTIC BAND METHOD ,ROOM-TEMPERATURE ,Unpaired electron ,Density functional theory ,SPIN-ORBIT ,ionizing radiation ,0210 nano-technology - Abstract
Identification of radiation-induced radicals in relatively simple molecules is a prerequisite for the understanding of reaction pathways of the radiation chemistry of complex systems. Sucrose presents an additional practical interest as a versatile radiation dosimetric system. In this work, we present a periodic density functional theory study aimed to identify the fourth stable radical species in this carbohydrate. The proposed model is a fragment suspended in the lattice by hydrogen bonds with an unpaired electron at the original C5’ carbon of the fructose unit. It requires a double scission of the ring accompanied by substantial chemical and geometric reorganization.
- Published
- 2017
9. Automated generation of radical species in crystalline carbohydrate using ab initio MD simulations
- Author
-
Andy Van Yperen-De Deyne, Einar Sagstuen, Ewald Pauwels, Veronique Van Speybroeck, and Siv G. Aalbergsjø
- Subjects
Crystal ,Molecular dynamics ,Chemical physics ,Computational chemistry ,Chemistry ,Ionization ,Radical ,Potential energy surface ,Ab initio ,General Physics and Astronomy ,Molecule ,Physical and Theoretical Chemistry ,Radiation chemistry - Abstract
As the chemical structures of radiation damaged molecules may differ greatly from their undamaged counterparts, investigation and description of radiation damaged structures is commonly biased by the researcher. Radical formation from ionizing radiation in crystalline α-l-rhamnose monohydrate has been investigated using a new method where the selection of radical structures is unbiased by the researcher. The method is based on using ab initio molecular dynamics (MD) studies to investigate how ionization damage can form, change and move. Diversity in the radical production is gained by using different points on the potential energy surface of the intact crystal as starting points for the ionizations and letting the initial velocities of the nuclei after ionization be generated randomly. 160 ab initio MD runs produced 12 unique radical structures for investigation. Out of these, 7 of the potential products have never previously been discussed, and 3 products are found to match with radicals previously observed by electron magnetic resonance experiments.
- Published
- 2014
- Full Text
- View/download PDF
10. radicals for EPR dosimetry: X- and Q band EPR study and LET dependency of crystalline potassium dithionate
- Author
-
Håkan Gustafsson, Einar Sagstuen, Eli O. Hole, and Anders Lund
- Subjects
Radiation ,Dithionate ,Radical ,law.invention ,Ion ,Crystal ,Crystallography ,chemistry.chemical_compound ,Nuclear magnetic resonance ,chemistry ,law ,Radiation damage ,Irradiation ,Electron paramagnetic resonance ,Instrumentation ,Hyperfine structure - Abstract
The structures of the free radicals formed by the irradiation of potassium dithionate (K2S2O6) with 60Co γ-rays and 14N7+ ions were investigated by EPR to further examine a recently proposed LET effect in this material. Two types of SO 3 − radical ions were identified in X-irradiated single crystals by measurements at X- and Q bands. One of these (S1) exhibited 33S hyperfine couplings A⊥ = 12.49, A|| = 15.60 mT, the other (S2) A⊥ = 11.29, A|| = 13.92 mT. The g-factors were nearly isotropic, g⊥ = 2.0010, g|| = 2.0003; and g⊥ = 2.0026, g|| = 2.0008, respectively. The 33S hyperfine coupling tensors and g-tensors were axially symmetric about the trigonal -axis, coinciding with the direction of the S–S bonds of the two non-equivalent S 2 O 6 2 − ions in the crystal. A model for the radiation damage was proposed in which the SO 3 − radical ions retain the orientation of the SO3 groups, aligned along the trigonal axis. The structure of a third main radical species (S3) with g⊥ = 2.0026, g|| = 2.0052 could not be unambiguously assigned, due to undetected 33S features. The relative integrated intensities of S1, S2 and S3 depended on the radiation quality and were approximately estimated as 0.18: 0.65:0.17 for 60Co γ-rays and 0.47: 0.38: 0.15 for 14N7+ ions. Additional weak lines on the low field side of the main signal were tentatively attributed to SO 2 − radical ions. An even weaker strongly anisotropic pair of lines was attributed to SO 3 − radical pairs separated by 0.93–0.95 nm along the trigonal axis.
- Published
- 2013
- Full Text
- View/download PDF
11. TiO2 suspension exposed to H2O2 in ambient light or darkness: Degradation of methylene blue and EPR evidence for radical oxygen species
- Author
-
Håvard J. Haugen, Sébastien Francis Michel Taxt-Lamolle, Eli O. Hole, Einar Sagstuen, André Krivokapić, and Luis Domínguez Sánchez
- Subjects
chemistry.chemical_classification ,Reactive oxygen species ,Process Chemistry and Technology ,Radical ,chemistry.chemical_element ,Photochemistry ,Oxygen ,Catalysis ,chemistry.chemical_compound ,chemistry ,Titanium dioxide ,Photocatalysis ,Hydrogen peroxide ,Methylene blue ,General Environmental Science - Abstract
The photocatalytic behaviour of TiO2 has been thoroughly investigated the past years using UV light to photoactivate TiO2. As this method introduces complications making it difficult to do it economically viable, new pathways to activate TiO2 have been sought. In the present work, reactive oxygen species (ROS) were obtained in a suspension of hydrogen peroxide (H2O2) and titanium dioxide (TiO2) in darkness, offering an alternative method to initiate oxidative behaviour of TiO2. Methylene blue (MB) degradation was chosen as an indicator for measuring the catalytic effect, allowing for a comparison of the reaction kinetics with other methods to create ROS with TiO2. The effects of TiO2 particle effective surface area and concentration of H2O2 were also studied. EPR studies were made to determine the presence of free radicals in the mixture of TiO2/H2O2 in darkness. Under the given lighting conditions, the results demonstrate the relevance of the TiO2 effective surface area and concentration of H2O2 and TiO2 as parameters influencing the chemical catalysis of MB due to the action of hydroxyl (OH ) and/or hydroperoxide radicals (HO2 ).
- Published
- 2013
- Full Text
- View/download PDF
12. Radical Formation in Lithium Formate EPR Dosimeters after Irradiation with Protons and Nitrogen Ions
- Author
-
Einar Sagstuen, Bo Stenerlöw, Einar Waldeland, Eirik Malinen, Erik Grusell, and Eli O. Hole
- Subjects
Formates ,Proton ,Biophysics ,Analytical chemistry ,Linear energy transfer ,law.invention ,Ion ,law ,Linear Energy Transfer ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Radiometry ,Electron paramagnetic resonance ,Spectroscopy ,Sweden ,Nitrogen Radioisotopes ,Radiation ,Dosimeter ,Chemistry ,Radiochemistry ,Electron Spin Resonance Spectroscopy ,Resonance ,Dose-Response Relationship, Radiation ,Cyclotrons ,Gamma Rays ,Protons - Abstract
Radical formation in polycrystalline lithium formate monohydrate after irradiation with gamma rays, protons and nitrogen ions at room temperature was studied by continuous-wave electron paramagnetic resonance (EPR) spectroscopy. The linear energy transfer (LET) of the various radiation beams was 0.2, 0.7-3.9 and 110-164 keV/microm for gamma rays, protons and nitrogen ions, respectively. Doses between 5 and 20 Gy were given. The EPR reading (the area under the EPR absorption resonance) increased linearly with dose for all types of radiation. As the LET increased, the relative effectiveness (the EPR reading per dose relative to that for gamma rays) decreased, while the EPR line width increased. Track structure theory and modeling of detector effectiveness predicted the dosimeter response observed after proton and nitrogen-ion irradiation. A semi-empirical line broadening model including dipolar spin-spin interactions was developed that explained the dependence of the line width on LET. The findings indicate that the local radical density in lithium formate is increased after high-LET irradiation.
- Published
- 2010
- Full Text
- View/download PDF
13. The energy dependence of lithium formate and alanine EPR dosimeters for medium energy x rays
- Author
-
Einar Waldeland, Einar Sagstuen, Eirik Malinen, and Eli O. Hole
- Subjects
Materials science ,Dosimeter ,business.industry ,X-ray ,Analytical chemistry ,chemistry.chemical_element ,General Medicine ,chemistry.chemical_compound ,chemistry ,Absorbed dose ,Dosimetry ,Formate ,Lithium ,Irradiation ,Cobalt-60 ,Nuclear medicine ,business - Abstract
Purpose: To perform a systematic investigation of the energy dependence of alanine and lilthium formate EPR dosimeters for medium energy x rays. Methods: Lithium formate and alanine EPR dosimeters were exposed to eight different x-ray beam qualities, with nominal potentials ranging from 50 to 200 kV. Following ionometry based on standards of absorbed dose to water, the dosimeters were given two different doses of approximately 3 and 6 Gy for each radiation quality, with three dosimeters for each dose. A reference series was also irradiated to three different dose levels at a {sup 60}Co unit. The dose to water energy response, that is, the dosimeter reading per absorbed dose to water relative to that for {sup 60}Co {gamma}-rays, was estimated for each beam quality. In addition, the energy response was calculated by Monte Carlo simulations and compared to the experimental energy response. Results: The experimental energy response estimates ranged from 0.89 to 0.94 and from 0.68 to 0.90 for lithium formate and alanine, respectively. The uncertainties in the experimental energy response estimates were typically 3%. The relative effectiveness, that is, the ratio of the experimental energy response to that following Monte Carlo simulations was, on average, 0.96 and 0.94 formore » lithium formate and alanine, respectively. Conclusions: This work shows that lithium formate dosimeters are less dependent on x-ray energy than alanine. Furthermore, as the relative effectiveness for both lithium formate and alanine were systematically less than unity, the yield of radiation-induced radicals is decreased following x-irradiation compared to irradiation with {sup 60}Co {gamma}-rays.« less
- Published
- 2010
- Full Text
- View/download PDF
14. Dosimetry of stereotactic radiosurgery using lithium formate EPR dosimeters
- Author
-
Einar Waldeland, Eli O. Hole, Einar Sagstuen, Eirik Malinen, and Magnus Hörling
- Subjects
Materials science ,Formates ,medicine.medical_treatment ,Lithium formate ,Radiosurgery ,Imaging phantom ,law.invention ,Planned Dose ,law ,medicine ,Calibration ,Humans ,Dosimetry ,Radiology, Nuclear Medicine and imaging ,Radiometry ,Electron paramagnetic resonance ,Dosimeter ,Radiological and Ultrasound Technology ,Phantoms, Imaging ,business.industry ,Electron Spin Resonance Spectroscopy ,Reproducibility of Results ,Radiotherapy Dosage ,Nuclear medicine ,business - Abstract
Small lithium formate EPR (electron paramagnetic resonance) dosimeters (diameter 3 mm, height 2 mm) were produced and employed for 2D dosimetry of stereotactic radiosurgery (SRS). An anthropomorphic head phantom with an in-house made insert holding 45 lithium formate dosimeters was used. A spherical target was outlined centrally in planning CT images of the head and an SRS dose plan with three arcs was made using the iPlan planning system. Beam collimation was achieved with the BrainLAB m3 micro-MLC. The minimum target dose was 15 Gy. The planned dose distribution was compared to measurements. For dosimetry, a dosimeter calibration series was generated with doses from 1 to 20 Gy. At the treatment unit, three replicate measurement series were performed. The measurements gave on average 2.2% lower dose at the plateau of the dose distribution compared to the dose plan. Larger differences were seen in the penumbra, where the dose plan underestimated the dose gradients. By repeated measurements, the systematic and random error in the SRS delivery was estimated to less than 1 mm. In conclusion, the planning system produced an intracranial dose distribution with tolerable accuracy. Furthermore, small lithium formate EPR dosimeters were useful for measuring SRS dose distributions.
- Published
- 2010
- Full Text
- View/download PDF
15. Primary Oxidation Products of 5-Methylcytosine: Methyl Dynamics and Environmental Influences
- Author
-
Eli O. Hole, Einar Sagstuen, Kjell Tage Øhman, William H. Nelson, and André Krivokapić
- Subjects
Models, Molecular ,Rotation ,Electron Spin Resonance Spectroscopy ,Molecular Conformation ,Crystal system ,Water ,Resonance ,Spectral line ,law.invention ,Crystal ,chemistry.chemical_compound ,Crystallography ,chemistry ,law ,5-Methylcytosine ,Quantum Theory ,Density functional theory ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Oxidation-Reduction ,Methyl group - Abstract
The primary oxidation product in X-irradiated single crystals of 5-methylcytosine hemihydrate and 5-methylcytosine hydrochloride has been studied at 10 K, using electron paramagnetic resonance (EPR), electron-nuclear double resonance (ENDOR), and ENDOR-induced EPR (EIE) spectroscopies. The radical is characterized by large couplings to the methyl protons and appears to be deprotonated at N1 in both crystal systems. In the hydrochloride crystal the methyl group is completely frozen at 10 K, whereas in the hemihydrate crystal it undergoes tunneling rotation. For the hemihydrate crystal, four ENDOR lines associated with transitions within the A and E rotational states were followed in three planes of rotation. Large ENDOR shifts as measured by saturation of the high- and low-field parts of the EPR spectrum indicate that the rotation is rather slow. Sidebands due to mixing of A and E rotational states are expected for slow rotation and were observed in both the EPR and the EIE spectra. The ENDOR shifts and the sideband frequencies indicate a tunneling splitting between 40 and 60 MHz. Estimates of the barrier to rotation in both crystalline systems were calculated using cluster and single-molecule density functional theory methods, and the results are consistent with those obtained by analysis of the experimental results.
- Published
- 2009
- Full Text
- View/download PDF
16. Schonland ambiguity in the electron nuclear double resonance analysis of hyperfine interactions: Principles and practice
- Author
-
Henk Vrielinck, Michel Waroquier, Einar Sagstuen, Freddy Callens, H. De Cooman, and Mihaela Adeluta Tarpan
- Subjects
Nuclear and High Energy Physics ,media_common.quotation_subject ,Biophysics ,Sensitivity and Specificity ,Biochemistry ,Spectral line ,law.invention ,Nuclear magnetic resonance ,law ,Computer Simulation ,Tensor ,Electron paramagnetic resonance ,Multiplet ,Hyperfine structure ,media_common ,Electron nuclear double resonance ,Chemistry ,Electron Spin Resonance Spectroscopy ,Reproducibility of Results ,Ambiguity ,Condensed Matter Physics ,Magnetostatics ,Models, Chemical ,Atomic physics ,Artifacts ,Algorithms - Abstract
For the analysis of the angular dependence of electron paramagnetic resonance (EPR) spectra of low-symmetry centres with S = 1/2 in three independent planes, it is well-established—but often overlooked—that an ambiguity may arise in the best-fit g ↔ tensor result. We investigate here whether a corresponding ambiguity also arises when determining the hyperfine coupling (HFC) A ↔ tensor for nuclei with I = 1/2 from angular dependent electron nuclear double resonance (ENDOR) measurements. It is shown via a perturbation treatment that for each set of M S ENDOR branches two best-fit A ↔ tensors can be derived, but in general only one unique solution simultaneously fits both. The ambiguity thus only arises when experimental data of only one M S multiplet are used in analysis or in certain limiting cases. It is important to realise that the ambiguity occurs in the ENDOR frequencies and therefore the other best-fit result for an ENDOR determined A ↔ tensor depends on various details of the ENDOR experiment: the M S state of the fitted transitions, the microwave frequency (or static magnetic field) in the ENDOR measurements and the rotation planes in which data have been collected. The results are of particular importance in the identification of radicals based on comparison of theoretical predictions of HFCs with published literature data. A procedure for obtaining the other best-fit result for an ENDOR determined A ↔ tensor is outlined.
- Published
- 2008
- Full Text
- View/download PDF
17. Radiation-Induced Radicals in Glucose-1-phosphate. I. Electron Paramagnetic Resonance and Electron Nuclear Double Resonance Analysis of in situ X-Irradiated Single Crystals at 77 K
- Author
-
Ewald Pauwels, Einar Sagstuen, Freddy Callens, Michel Waroquier, Hendrik De Cooman, and Gauthier Vanhaelewyn
- Subjects
Models, Molecular ,Electron nuclear double resonance ,Proton ,Chemistry ,Stereochemistry ,X-Rays ,Radical ,Electron Spin Resonance Spectroscopy ,Glucosephosphates ,Radiation chemistry ,Hydrogen atom abstraction ,Surfaces, Coatings and Films ,law.invention ,Crystallography ,law ,Materials Chemistry ,Irradiation ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Bond cleavage - Abstract
Electron magnetic resonance analysis of radiation-induced defects in dipotassium glucose- 1-phosphate dihydrate single crystals in situ X-irradiated and measured at 77 K shows that at least seven different carbon-centered radical species are trapped. Four of these (R1-R4) can be fully or partly characterized in terms of proton hyperfine coupling tensors. The dominant radical (R2) is identified as a Cl-centered species, assumedly formed by a scission of the sugar-phosphate junction and the concerted formation of a carbonyl group at the neighboring C2 carbon. This structure is chemically identical to a radical recently identified in irradiated sucrose single crystals. Radical species Rl and R4 most likely are C3- and C6-centered species, respectively, both formed by a net hydrogen abstraction. R3 is suggested to be chemically similar to but geometrically different from R4. Knowledge of the identity of the sugar radicals present at 77 K provides a first step in elucidating the formation mechanism of the phosphoryl radicals previously detected after X-irradiation at 280 K. In paper II, the chemical identity, precise conformation, and possible formation mechanisms of these radical species are investigated by means of DFT calculations and elementary insight into the radiation chemistry of sugar and sugar derivatives is obtained.
- Published
- 2008
- Full Text
- View/download PDF
18. Combined Electron Magnetic Resonance and Density Functional Theory Study of 10 K X-Irradiated β-<scp>d</scp>-Fructose Single Crystals
- Author
-
Ewald Pauwels, Michel Waroquier, Einar Sagstuen, Freddy Callens, Henk Vrielinck, and Mihaela Adeluta Tarpan
- Subjects
Electron nuclear double resonance ,Free Radicals ,Proton ,Chemistry ,X-Rays ,Radical ,Electron Spin Resonance Spectroscopy ,Fructose ,Hydrogen atom abstraction ,law.invention ,Crystallography ,Nuclear magnetic resonance ,Models, Chemical ,law ,Density functional theory ,Irradiation ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Hyperfine structure - Abstract
Primary free radical formations in fructose single crystals X-irradiated at 10 K were investigated at the same temperature using X-band Electron Paramagnetic Resonance (EPR), Electron Nuclear Double Resonance (ENDOR) and ENDOR induced EPR (EIE) techniques. ENDOR angular variations in the three principal crystallographic planes and a fourth skewed plane allowed the unambiguous determination of five proton hyperfine coupling tensors. From the EIE studies, these hyperfine interactions were assigned to three different radicals, labeled T1, T1* and T2. For the T1 and T1* radicals, the close similarity in hyperfine coupling tensors suggests that they are due to the same type of radical stabilized in two slightly different geometrical conformations. Periodic density functional theory calculations were used to aid the identification of the structure of the radiation-induced radicals. For the T1/T1* radicals a C3 centered hydroxyalkyl radical model formed by a net H abstraction is proposed. The T2 radical is proposed to be a C5 centered hydroxyalkyl radical, formed by a net hydrogen abstraction. For both radicals, a very good agreement between calculated and experimental hyperfine coupling tensors was obtained.
- Published
- 2008
- Full Text
- View/download PDF
19. An international intercomparison on 'self-calibrated' alanine EPR dosimeters
- Author
-
Emanuela Bortolin, Einar Sagstuen, Z. Peimel-Stuglik, Sandro Onori, Nicola D. Yordanov, Erik Malinen, J. Raffi, S. Fabisiak, Freddy Callens, Veselka Gancheva, and Gauthier Vanhaelewyn
- Subjects
Radiation ,Dosimeter ,Spectrometer ,Chemistry ,law ,Microwave power ,Calibration ,Analytical chemistry ,Epr dosimetry ,Irradiation ,Electron paramagnetic resonance ,γ irradiation ,law.invention - Abstract
The results, obtained by six independent electron paramagnetic resonance (EPR) laboratories, of the dose response coefficients ( K dr ) of “self-calibrated” solid-state EPR dosimeters containing alanine as a radiation-sensitive material and Mn 2+ /MgO as an internal reference material, are reported. The intercomparison trial was divided into three steps. It started with the distribution of dosimeters among the participating EPR laboratories with the purpose of irradiating them with known doses of γ -rays and to estimate the K dr . The percentage standard deviation (PSD) of the K dr obtained at individual labs was in the range of 1.4–4.6%. The interlaboratory PSD of the K dr was 8%, primarily pointing to variations in irradiation procedures and EPR spectrometer settings. Further investigations showed that the main source of the interlaboratory PSD is differences in the calibrations of irradiators and settings of EPR acquisition parameters. In order to provide reproducible estimates of the K dr , low microwave power and modulation amplitude using a combination of sweep time and time constant that gives a distortion-free EPR spectrum should be utilized. In the third step following such a procedure, measuring the same irradiated alanine dosimeter at the respective laboratories, spectrometers (12 instruments of 6 different models and 3 producers) and 10 operators gave an interlaboratory PSD of 3.1%. In conclusion, EPR dosimetry using “self-calibrated” alanine dosimeters may be used as a secondary standard, although a careful calibration of the EPR spectrometer must be performed in order to further reduce the uncertainty.
- Published
- 2008
- Full Text
- View/download PDF
20. New Evidence for Hydroxyalkyl Radicals and Light- and Thermally Induced Trapped Electron Reactions in Rhamnose
- Author
-
Einar Sagstuen and Siv G. Aalbergsjø
- Subjects
Free Radicals ,Light ,Radical ,Population ,Biophysics ,Molecular Conformation ,Photochemistry ,Crystallography, X-Ray ,Rhamnose ,law.invention ,chemistry.chemical_compound ,X-Ray Diffraction ,law ,Molecule ,Radiology, Nuclear Medicine and imaging ,Radical disproportionation ,Electron paramagnetic resonance ,education ,education.field_of_study ,Radiation ,Molecular Structure ,X-Rays ,Electron Spin Resonance Spectroscopy ,Temperature ,Resonance ,chemistry ,X-ray crystallography ,Crystallization ,Methyl group - Abstract
Radical formation and trapping of radicals in X-irradiated crystals of rhamnose at 6 K were investigated using electron paramagnetic resonance (EPR), electron-nuclear double resonance (ENDOR) and ENDOR-induced EPR (EIE) techniques, complemented with periodic density functional theory (DFT) calculations. The two major radical species at 6 K were the O4-centered alkoxy radical and the intermolecularly trapped electron (IMTE), previously also detected by other authors. The current experimental results provided hyperfine coupling constants for these two species in good agreement with the previous data, thus providing a consistency check that improves their credibility. In addition to the O4-centered alkoxy radical and the IMTE, the C3-centered and C5-centered hydroxyalkyl radicals are the most prominent primary species at 6 K. The C3-centered radical appears in two slightly different conformations at 6 K, designated C and D. The C5-centered radical exhibits a coupling to a methyl group with tunneling rotation at 6 K, and analysis of one of the rotational substates (A) of the spin system yielded an understanding of the structure of this radical. Visible light bleaching of the IMTE at 6 K led to the C3-centered radical C, and thermal annealing above 6 K resulted in a conversion of the C to the D conformation. In addition, thermal annealing releases the IMTE, apparently resulting in the formation of the C2-centered radical. It is possible that the thermal decay of the IMTE also contributes to a small part of the C3-centered radical (D) population at 85 K. There are several other products trapped in rhamnose crystals directly after irradiation at 6 K, among which are resonance lines due to the C2 H-abstraction product. However, these other products are minority species and were not fully characterized in the current work.
- Published
- 2015
21. Lithium Formate for EPR Dosimetry (2): Secondary Radicals in X-Irradiated Crystals
- Author
-
Audun Sanderud, Einar Sagstuen, Eli O. Hole, André Krivokapić, and Siv G. Aalbergsjø
- Subjects
Models, Molecular ,Electron nuclear double resonance ,Radiation ,Formates ,Free Radicals ,Chemistry ,Radical ,X-Rays ,Inorganic chemistry ,Biophysics ,Electron Spin Resonance Spectroscopy ,Molecular Conformation ,Temperature ,Protonation ,Lithium formate ,Periodic density functional theory ,law.invention ,law ,Physical chemistry ,Epr dosimetry ,Quantum Theory ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Electron paramagnetic resonance ,Radiometry - Abstract
The secondary radiation-induced radicals in lithium formate monohydrate were studied using electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR) and ENDOR-induced EPR (EIE) techniques complemented with periodic density functional theory (DFT) calculations. Single crystals of lithium formate monohydrate were X irradiated at 77 K and at room temperature. The main radicals present after irradiation at 77 K are the CO(2)(•-) radical (R1), the recently identified protonated electron-gain product, HCOOH(•-) (R2) (Krivokapić et al., Radiat Res 2014: 181:503-11), and a different geometrical conformation of this latter radical, a species that, up until now, has remained unidentified (R3). The successful quantum chemical modeling of R3 confirmed its structure and also provided a possible mechanism for its formation. After irradiation at 295 K, the crystals were investigated both shortly after irradiation and after storage for eight months at room temperature in ambient environments. After long-term storage the CO(2)(•-) radical had significantly decayed and the EPR spectra were dominated by two minority radicals. Both of these radicals are most likely formate-centered π-radicals, and based on the observed EPR parameters (g- and hyperfine coupling tensors) tentative candidates are the CO(•-) radical and the dimer formed by the CO(2)(•-) radical and a neighboring formate molecule yielding the radical (-)O(2)C·O·(•)CH·O(-).
- Published
- 2015
22. Electron Transfer in Amino Acid·Nucleic Acid Base Complexes: EPR, ENDOR, and DFT Study of X-Irradiated N-Formylglycine·Cytosine Complex Crystals
- Author
-
Eli O. Hole, Einar Sagstuen, Randi Vagane, William H. Nelson, and David M. Close
- Subjects
Models, Molecular ,Radical ,Glycine ,Protonation ,Photochemistry ,Redox ,law.invention ,Electron Transport ,Cytosine ,chemistry.chemical_compound ,Electron transfer ,law ,Nucleic Acids ,Amino Acids ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Base Pairing ,Electron nuclear double resonance ,Dipeptide ,Molecular Structure ,Spectrum Analysis ,Electron Spin Resonance Spectroscopy ,Models, Chemical ,chemistry ,Crystallization ,Oxidation-Reduction - Abstract
Single crystals of the 1:1 complex of the nucleic acid base cytosine and the dipeptide N-formylglycine (C· NFG) have been irradiated at 10 and 273 K to doses of about 70 kGy and studied at temperatures between 10 and 293 K using 24 GHz (K-band) and 9.5 GHz (X-band) electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and ENDOR-induced EPR (EIE) spectroscopy. In this complex, the cytosine base is hydrogen bonded at positions N3 and N4 to the carboxylic group of the dipeptide, and the N3 position of cytosine has become protonated by the carboxylic group. At 10 K, two major radicals were characterized and identified. One of these (R1) is ascribed to the decarboxylated N-formylglycine one-electron oxidized species. The other (R2) is the N3-protonated cytosine one-electron reduced species. A third minority species (R3) appears to be a different conformation or protonation state of the one-electron reduced cytosine radical. Upon warming, the R2 and R3 radicals decay at about 100 K, and at 295 K, the only cytosine-centered radicals present are the C5 and C6 H-addition radicals (R5, R6). The Rl radical decays at about 150 K, and a glycine backbone radical (R4) grows in slowly. Thus, in the complex, a complete separation of initial oxidation and reduction events occurs, with oxidation localized at the dipeptide moiety, whereas reduction occurs at the nucleic acid base moiety. DFT calculations indicate that this separation is driven by large differences in electron affinities and ionization potentials between the two constituents of the complex. Once the initial oxidation and reduction products are trapped, no further electron transfer between the two constituents of the complex takes place.
- Published
- 2006
- Full Text
- View/download PDF
23. Study on the EPR/dosimetric properties of some substituted alanines
- Author
-
Einar Sagstuen, Nicola D. Yordanov, and Veselka Gancheva
- Subjects
Alanine ,Radiation ,Chemistry ,Radical ,Analytical chemistry ,law.invention ,Crystallography ,Deuterium ,law ,Absorbed dose ,Epr dosimetry ,Crystallite ,Irradiation ,Electron paramagnetic resonance - Abstract
Polycrystalline phenyl-alanine and perdeuterated l - α -alanine ( l - α -alanine-d 4 ) were studied as potential high-energy radiation-sensitive materials (RSM) for solid state/EPR dosimetry. It was found that phenyl-alanine exhibits a linear dose response in the dose region 0.1–17 kGy. However, phenyl-alanine is about 10 times less sensitive to γ -irradiation than standard l - α -alanine irradiated at the same doses. Moreover, the EPR response from phenyl-alanine is unstable and, independent of the absorbed dose, decreases by about 50% within 20 days after irradiation upon storage at room temperature. γ -irradiated polycrystalline perdeuterated l - α -alanine (CD 3 CD(NH 2 )COOH) has not previously been studied at room temperature by EPR spectroscopy. The first part of the present analysis was with respect to the structure of the EPR spectrum. By spectrum simulations, the presence of at least two radiation induced free radicals, R 1 =CH 3 C • (H)COOH and R 2 =H 3 N + −C • (CH 3 )COO − , was confirmed very clearly. Both these radicals were suggested previously from EPR and ENDOR studies of standard alanine crystals. The further investigations into the potential use of alanine-d 4 as RSM, after choosing optimal EPR spectrometer settings parameters for this purpose, show that it is ca. two times more sensitive than standard l - α -alanine.
- Published
- 2006
- Full Text
- View/download PDF
24. Formates and dithionates: sensitive EPR-dosimeter materials for radiation therapy
- Author
-
Håkan Gustafsson, Tor Arne Vestad, Einar Sagstuen, Marek Danilczuk, Eli O. Hole, M. D. Sastry, Eirik Malinen, Eva Lund, and Anders Lund
- Subjects
Formates ,Radical ,Inorganic chemistry ,Sensitivity and Specificity ,law.invention ,chemistry.chemical_compound ,law ,Ammonium formate ,Dosimetry ,Microwaves ,Radiometry ,Electron paramagnetic resonance ,Radiation ,Dosimeter ,Radiotherapy ,Radiotherapy Planning, Computer-Assisted ,Radiochemistry ,Electron Spin Resonance Spectroscopy ,Reproducibility of Results ,Thiones ,Dose-Response Relationship, Radiation ,Radiotherapy Dosage ,Metal ion doping ,Deuterium ,chemistry ,Crystallite - Abstract
Polycrystalline, formates and dithionates are promising materials for EPR dosimetry, as large yields of radiation induced stable radicals are formed with a linear dose response. Rapid spin relaxation rates were detected in many of the substances, indicating that a high microwave power can be applied during EPR acquisition in order to improve sensitivity. Different techniques used to further improve the sensitivity, such as the replacement of Li-7 with Li-6 or exchange of protons with deuterons in the corresponding crystalline matrices and metal ion doping are discussed. It is concluded that formates and dithionates may be up to 10 times as sensitive as L-alpha-alanine. (C) 2004 Elsevier Ltd. All rights reserved.
- Published
- 2005
- Full Text
- View/download PDF
25. ENDOR-Assisted Study of the Stable EPR Spectrum of X-Irradiated α-𝗟-Sorbose Single Crystals: MLCFA and Simulation Decomposition Analyses
- Author
-
Einar Sagstuen, Gauthier Vanhaelewyn, B Jansen, and Freddy Callens
- Subjects
Likelihood Functions ,Electron nuclear double resonance ,Radiation ,Chemistry ,Radical ,Electron Spin Resonance Spectroscopy ,Biophysics ,Spectral line ,law.invention ,Crystallography ,Nuclear magnetic resonance ,Fragmentation (mass spectrometry) ,Pyranose ,law ,Sorbose ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Crystallization ,Electron paramagnetic resonance - Abstract
After X irradiation of single crystals of alpha-L-sorbose at 295 K, previous electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and ENDOR-induced EPR (EI-EPR) results have indicated the formation of at least 10 different free radicals, and also that conceivably each carbon in the pyranose ring is a possible radical center. The radicals appear to be formed mostly by net H-abstraction reactions followed by standard elimination (e.g. beta-OH elimination) reactions or proton shifts, in turn leading to ring opening and fragmentation. In the present work, EPR spectra were recorded at room temperature with the external magnetic field along each of the three crystallographic axes subsequent to careful annealing at different temperatures using a high-temperature cavity. Each of the three sets of spectra was subjected to a maximum likelihood common factor analysis (MLCFA) that contributed to a better understanding of the spectral decays. Furthermore, the most stable spectra were simulated by optimization of previous ENDOR and EI-EPR results. The optimized EPR parameters resulted in excellent simulations of the experimental stable sorbose spectra and hence provided an improved insight of their spectral compositions.
- Published
- 2004
- Full Text
- View/download PDF
26. Estimation of X-ray beam quality by electron paramagnetic resonance (EPR) spectroscopy
- Author
-
Eli O. Hole, Tor Arne Vestad, Elin Agathe Hult, Einar Sagstuen, and Eirik Malinen
- Subjects
Radiation ,Photon ,Calibration curve ,Chemistry ,law ,Ionization ,Laser beam quality ,Atomic physics ,Photon energy ,Absorption (electromagnetic radiation) ,Electron paramagnetic resonance ,Beam (structure) ,law.invention - Abstract
A novel dosimetry-based technique using EPR spectroscopy to determine X-ray beam quality is proposed. The radiation-sensitive material is made of a mixture of two polycrystalline substances with different X-ray absorption properties. The composite samples, consisting of polycrystalline lithium formate monohydrate and calcium formate, were prepared as pellets, X-irradiated, and analyzed with EPR spectroscopy. The ratio of the EPR signal amplitudes of the two constituents can serve as a measure of the X-ray beam quality given by the equivalent photon energy. The calculation of the signal amplitude ratio involves a reconstruction of the composite EPR spectrum. The logarithm of the signal amplitude ratio appears to be linearly correlated with the logarithm of the equivalent photon energy. The linear relationship can be used as a calibration for estimating the equivalent photon energy from the composite EPR spectrum. The composite material was used to investigate the changes in the equivalent photon energy in a Perspex phantom with increasing depth. When a 220 kV X-ray beam with an equivalent photon energy of about 100 keV was used, changes in the EPR signal amplitude ratio revealed a buildup of scattered photons with increasing depth in the phantom. This change could be related to the equivalent photon energy using the logarithmic calibration curve. It was found that the equivalent photon energy at the depth of 13 cm in the phantom was 25% lower than on its surface. The proposed method can be used for estimating equivalent photon energy in both standardized and non-standardized situations, the latter corresponding to beam setups where use of filters and ionization chambers is difficult or impossible. Also, the system can provide a means for measuring photon energy in X-irradiated phantoms.
- Published
- 2004
- Full Text
- View/download PDF
27. EPR study of light illumination effects on radicals in gamma-irradiated l-alanine
- Author
-
K. Schultka, Einar Sagstuen, M. Penkowski, and Bartlomiej Ciesielski
- Subjects
Time Factors ,Free Radicals ,Light ,Radical ,Population ,Photochemistry ,Analytical Chemistry ,law.invention ,Ionizing radiation ,law ,Irradiation ,Microwaves ,Electron paramagnetic resonance ,education ,Instrumentation ,Lighting ,Spectroscopy ,Fluorescent lamp ,education.field_of_study ,Alanine ,Dosimeter ,Chemistry ,Electron Spin Resonance Spectroscopy ,Temperature ,Gamma ray ,Dose-Response Relationship, Radiation ,Atomic and Molecular Physics, and Optics ,Gamma Rays ,Sunlight ,Powders - Abstract
Exposure of gamma-irradiated L-alanine samples to sunlight and to light from a regular, fluorescent lamp resulted in significant changes in their EPR resonance patterns, both to spectral shapes and intensities. The experimental EPR spectra were numerically decomposed into three components reflecting contributions of three different radicals (R1-R3) generated by ionizing radiation in alanine. The light exposure caused a decay of the measured EPR signal intensity. For similar light intensities and exposure times the decay was much more pronounced in samples illuminated by sunlight than in samples illuminated by the fluorescent lamp. In both cases light-induced decay of R1 radicals was observed. Sunlight illumination resulted in a moderate decay of R2 radicals and in a doubling of the R3 radical population. On the other hand, fluorescent light caused a significant increase of R2 radicals and did not change the amount of R3 radicals. A quantitative analysis of the variations of the three radical contributions to the total EPR spectra upon fluorescent light exposure suggests a net R1-->R2 free radical transformation. These effects of light on the alanine dosimetric signal should be taken into account in dosimetry protocols, assuring protection of alanine dosimeters from extended exposure to light.
- Published
- 2004
- Full Text
- View/download PDF
28. Experimental and Theoretical Electron Magnetic Resonance Study on Radiation-Induced Radicals in α-<scp>l</scp>-Sorbose Single Crystals
- Author
-
Gauthier Vanhaelewyn, Einar Sagstuen, Michel Waroquier, Bjørn Jansen, Freddy Callens, and Ewald Pauwels
- Subjects
Electron nuclear double resonance ,Radical ,Crystal structure ,Sorbose ,law.invention ,chemistry.chemical_compound ,Crystallography ,chemistry ,Computational chemistry ,law ,Density functional theory ,Irradiation ,Physical and Theoretical Chemistry ,Anisotropy ,Electron paramagnetic resonance - Abstract
α-L-Sorbose single crystals were X-irradiated at 295 K (room temperature). A combined electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and ENDOR-induced EPR (EI-EPR) study at 120 K revealed a realm of radiation-induced free radicals in this sugar system. In the present work, a pair of closely related radicals is focused on, being dominant immediately after irradiation, but unstable with respect to long time storage or upon warming the samples. A density functional theory (DFT) study was carried out considering the complete hyperfine coupling tensors (principal axes and anisotropic and isotropic couplings) in comparison with the observed electron-proton interactions. This combined approach yielded very plausible models for both radicals, which are formed by a net hydrogen-abstraction from the C3 position of the six-membered sorbose ring. It appears that the difference between the two species is linked to the molecular disorder in the sorbose crystal structure. In addition, DFT calculations of the g tensors were performed for the plausible radical conformations.
- Published
- 2004
- Full Text
- View/download PDF
29. Radiation-induced radicals in lithium formate monohydrate (LiHCO2·H2O). EPR and ENDOR studies of X-irradiated crystal and polycrystalline samples
- Author
-
Einar Sagstuen, Eli O. Hole, Tor Arne Vestad, Anders Lund, and Håkan Gustafsson
- Subjects
Chemistry ,Radical ,Analytical chemistry ,General Physics and Astronomy ,chemistry.chemical_element ,law.invention ,Ion ,Crystal ,Crystallography ,law ,Lithium ,Physical and Theoretical Chemistry ,Spectroscopy ,Electron paramagnetic resonance ,Hyperfine structure ,Single crystal - Abstract
Single crystals and polycrystalline samples of lithium formate monohydrate (HCO2Li·H2O) were X-irradiated at 295 K and studied using X-band EPR, ENDOR, and ENDOR-induced EPR (EIE) spectroscopy at 200 or 295 K. Two different radical species were observed. The overall dominating species is the ˙CO2− radical trapped in the crystal matrix at an orientation not very different from that of the parent CO2 fragment in the unirradiated matrix. The g- and 13C hyperfine coupling tensors of the ˙CO2− radical were determined. The large linewidth (about 1.5 mT) of the polycrystalline EPR spectrum is due to extensive hyperfine couplings with lithium ions and protons in the environment. Four lithium couplings and four proton couplings associated with the ˙CO2− radical were measured, and all couplings were assigned to specific matrix nuclei. The spectra yield evidence for a second radical in low relative abundance. One small lithium hyperfine interaction detected was ascribed to this radical. Spectral simulations of the EPR and ENDOR spectra support the conclusions made.
- Published
- 2004
- Full Text
- View/download PDF
30. Hole Transfer and Differential Radical Recombination in X-Irradiated Doped Crystalline DNA Model Systems
- Author
-
Einar Sagstuen and André Krivokapić
- Subjects
Radical ion ,Chemistry ,Radical ,Doping ,Molecular models of DNA ,Radiation induced ,Irradiation ,Physical and Theoretical Chemistry ,Photochemistry ,Recombination ,Differential (mathematics) - Abstract
Radiation induced hole transfer and differential recombination of radicals at room temperature and lower temperatures (77 and 12 K) have been studied in crystals of cytosine·HCl doped with 5-methyl...
- Published
- 2003
- Full Text
- View/download PDF
31. EPR and ENDOR Study of Crystalline Cytosine·HCl Doped with 5-Methylcytosine. Radiation-Induced Radical Formation and Hole Transfer
- Author
-
Einar Sagstuen, Eli O. Hole, and André Krivokapić
- Subjects
Magnetic Resonance Spectroscopy ,Free Radicals ,Radical ,Biophysics ,Electrons ,Photochemistry ,Redox ,law.invention ,Cytosine ,Magnetics ,chemistry.chemical_compound ,law ,Radiation, Ionizing ,Radiology, Nuclear Medicine and imaging ,Crystallization ,Electron paramagnetic resonance ,Spectroscopy ,Radiation ,Chemistry ,Doping ,Electron Spin Resonance Spectroscopy ,Temperature ,Nuclear magnetic resonance spectroscopy ,Models, Chemical ,5-Methylcytosine ,Hydrochloric Acid ,Protons ,Methyl group - Abstract
Radical formation and hole transfer were investigated in crystals of cytosine.HCl (C.HCl) doped with 0-1.1 mol-% 5-methylcytosine x HCl (5MC x HCl). The doping level was determined by NMR spectroscopy. Crystals and polycrystalline samples were X-irradiated at 295 K, 77 K and 12 K and studied with EPR, ENDOR and FSE spectroscopy at these temperatures. At 295 K the dominant radicals were the so-called 3alphaH radical, formed in 5MC by a net H-abstraction from the methyl group, and the cytosine C6 H-addition (5-yl) radical. At 12 K five radicals were identified. These were the 3alphaH radical, cytosine reduction and oxidation products, and the cytosine C6 and C5 H-addition (5-yl and 6-yl, respectively) radicals. The spectroscopic parameters for the 3alphaH radical are very similar to those of a radical observed previously in the crystalline cytosine derivatives cytidine (CR), 2'deoxycytidine hydrochloride (CdR x HCl), 5'dCMP and 3'CMP as well as in the uracil derivative 2-thiouracil (2-TU). It was shown that amounts of the order of tenths of a percent 5MC x HCl doped into crystals of C.HCl give rise to a considerable yield of 3alphaH radicals after exposure to ionizing radiation both at room temperature and at lower temperatures. This supports a previous suggestion that naturally occurring 5-methylated cytosine impurities may be responsible for the formation of 3alphaH radicals in the crystalline cytosine derivatives CR, CdR.HCl, 5'dCMP and 3'CMP and suggests that the 3alphaH radical in these systems is a 5-methylated base-centered radical. The total radical yield in doped C x HCl crystals increased considerably with the doping level, both at low temperatures and at room temperature, implying that the 3alphaH radical is more stable than the primary cytosine radicals. The relative amounts of the 3alphaH radical were obtained by using simulated benchmark spectra to reconstruct experimental EPR spectra of doped polycrystalline samples. Evidence is presented suggesting that the enhanced yield of the 3alphaH radical in doped samples is due to holes originally formed at cytosine bases and transferred to 5-methylcytosine bases in addition to the 3alphaH radical being less exposed to recombination than other cytosine radicals.
- Published
- 2003
- Full Text
- View/download PDF
32. Radical Formation in Pyrimidine Bases after X, Proton and α-Particle Irradiation
- Author
-
Einar Sagstuen and Eirik Malinen
- Subjects
Models, Molecular ,Free Radicals ,Pyrimidine ,Proton ,Radical ,Biophysics ,Linear energy transfer ,Radiation Dosage ,Photochemistry ,law.invention ,Cytosine ,chemistry.chemical_compound ,law ,Computer Simulation ,Linear Energy Transfer ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Electron paramagnetic resonance ,Radiation ,X-Rays ,Electron Spin Resonance Spectroscopy ,Dose-Response Relationship, Radiation ,Alpha particle ,Alpha Particles ,Thymine ,Pyrimidines ,chemistry ,Physical chemistry ,Protons ,Crystallization - Abstract
Single crystals of anhydrous thymine (Ta) and cytosine monohydrate (Cm) were irradiated at room temperature using X rays, 20 MeV protons and 35 MeV alpha particles, and the relative distributions of the various radiation-induced stable radicals in the crystals were investigated. These two crystal systems were chosen because of systematic differences in their molecular packing and hydrogen-bonding network. The radicals stabilized in these systems have previously been identified and analyzed by several authors. Experimental EPR spectra could thus be reconstructed based on simulated benchmark spectra using a fitting procedure, yielding the relative amounts of the different radical species. It was found that the relative amounts of a given radical species varied with the type of radiation used, with differences being most prominent between alpha particles and protons or X rays. In Ta, an increased production of hydrogen addition or abstraction radicals was found after exposure to alpha particles. These radicals are believed to be formed predominantly from superexcited states, resulting from the higher density of ionizations along the track of the alpha particle. A corresponding reduction in radicals derived from proton transfer reactions was observed in comparison with exposure to protons or X rays. In Cm, the differences were smaller than for Ta. This is probably due to differences in the arrangement of the crystal lattice between the two systems, with Cm having an extended hydrogen-bonding network promoting fast proton transfers after ionization. Most interesting, however, was the observation that more than 50% of the radical population in Cm not could be accounted for by known radical species. The population with an unknown origin was represented with a broad singlet, having a line width of 1.5 mT and a g value of 2.0045, in the spectral reconstruction procedure.
- Published
- 2003
- Full Text
- View/download PDF
33. Alanine Radicals, Part 3: Properties of the Components Contributing to the EPR Spectrum of X-Irradiated Alanine Dosimeters
- Author
-
Mojgan Z. Heydari, Einar Sagstuen, Eli O. Hole, and Eirik Malinen
- Subjects
Alanine ,Radiation ,Dosimeter ,Free Radicals ,Chemistry ,X-Rays ,Radical ,Radiochemistry ,Electron Spin Resonance Spectroscopy ,Biophysics ,Spectral line ,law.invention ,Magnetics ,law ,Thermodynamics ,Dosimetry ,Physical chemistry ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Radiometry ,Electron paramagnetic resonance - Abstract
The amino acid l-alpha-alanine has attracted considerable interest for use in radiation dosimetry and has been formally accepted as a secondary standard for high-dose and transfer dosimetry. Recent results have shown that the alanine EPR spectrum consists of contributions from three different radicals. A set of benchmark spectra describing the essential spectral features of these three radical components was used for reconstructions of the experimental spectra. In the present work, these basis spectra have been used to investigate the differential effects of variations in radiation doses and microwave power, as well as the dependence upon temperature annealing and UV illumination. The results presented here, based solely on relatively low-energy (60-80 keV) X rays, indicate that the three components behave very similarly with respect to radiation dose at room temperature. However, with respect to the thermal annealing/fading behavior and microwave power saturation properties, the three species behave significantly differently. It is concluded that even if it is now realized that three different radicals contribute to the composite EPR alanine spectrum, this has a minor impact on the established protocols for present-day applications (high-dose) of EPR/alanine dosimetry. However, some care should be exercised when e.g. constructing calibration curves, since fading and power saturation behavior may vary over the dose range in question. New results from UV-illumination experiments suggest a possible procedure for experimental spectral separation of the EPR signals due to the three radicals.
- Published
- 2003
- Full Text
- View/download PDF
34. EPR and ENDOR studies of single crystals of 2-oxazolidinone X-irradiated at 295 K
- Author
-
Einar Sagstuen, Anders Lund, and Ali Hosseini
- Subjects
Proton ,Chemistry ,General Physics and Astronomy ,Dihedral angle ,Ring (chemistry) ,law.invention ,Crystallography ,chemistry.chemical_compound ,law ,Molecule ,Irradiation ,Physical and Theoretical Chemistry ,Methylene ,Electron paramagnetic resonance ,Hyperfine structure - Abstract
When single crystals of the 5-membered heterocyclic ring structure 2-oxazolidinone (C3O2NH5) are irradiated at room temperature, the major radical formed (R1) decays during a period of a few hours, leaving a broad, unstructured EPR spectrum not amenable to analysis. Cooling the crystals to about 140 K immediately after irradiation at room temperature allows analysis of the R1 radical by EPR and ENDOR. The radical is formed by a net H-abstraction from one of the two methylene groups of the molecule. A full EPR and ENDOR analysis of four proton interactions (one α-coupling, and three β-couplings) together with ESR evidence for a small nitrogen hyperfine interaction allowed for a precise identification of R1. The results show that the carbon-centered radical R1 is puckered at the radical center. Using DFT calculations together with the experimental EPR and ENDOR results, the torsion angle of the C1–H bond with respect to the N–C1–C2 plane is estimated to be 13–15° (bending angle θ ≈ 7°). The DFT calculations reproduced the carbon-bonded proton hyperfine coupling constants satisfactorily but failed to reproduce the experimental results for the nitrogen and nitrogen-bonded proton hyperfine interactions.
- Published
- 2002
- Full Text
- View/download PDF
35. Alanine Radicals. 2. The Composite Polycrystalline Alanine EPR Spectrum Studied by ENDOR, Thermal Annealing, and Spectrum Simulations
- Author
-
Einar Sagstuen, Mojgan Z. Heydari, Eirik Malinen, and Eli O. Hole
- Subjects
Alanine ,Chemistry ,Radical ,Resonance ,Protonation ,Photochemistry ,Spectral line ,law.invention ,Crystallography ,law ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Spectroscopy ,Free Radical Formation - Abstract
Radiation-induced free radical formation in the amino acid l-α-alanine has been studied using powder and single-crystal X-, K-, and Q-band electron paramagnetic resonance (EPR) spectroscopy, X-band powder electron−nuclear double resonance (ENDOR), thermal annealing, and EPR spectrum simulations. The spectra obtained after room temperature irradiations are composite, consisting of resonances from mainly three radicals denoted R1, R2, and R3. R1 is the well-known, stable room-temperature species formed by deamination from a protonated alanine anion radical. On the basis of simulations of EPR spectra obtained at X-, K-, and Q-bands, the room-temperature EPR spectrum seems to consist of about 55% of R1. Upon thermal annealing, the R1 resonance disappears faster than those of the other two components. The R2 species is presumably formed in the oxidative chain of radiation-induced events by net H-abstraction from the central alanine carbon atom. Q-band EPR was used to determine the g-tensor of R2. This species ...
- Published
- 2002
- Full Text
- View/download PDF
36. ENDOR Study of 14N Hyperfine and Quadrupole Couplings of N2D4•+ Formed in Deuterated Li(N2H5)SO4 Single Crystal
- Author
-
Anders Lund, Einar Sagstuen, Yoshiteru Itagaki, and Audun Sanderud
- Subjects
Chemistry ,law.invention ,Crystal ,Crystallography ,Nuclear magnetic resonance ,Deuterium ,law ,Quadrupole ,Density functional theory ,Physical and Theoretical Chemistry ,Spectroscopy ,Electron paramagnetic resonance ,Single crystal ,Hyperfine structure - Abstract
X-irradiated Li(N2D5)SO4 single crystals were investigated using EPR and ENDOR spectroscopy. The N-14-ENDOR spectra of the deuterated hydrazine radical cation N2D4.+ were clearly observed at 240 K. N-14 hyperfine (life) and nuclear quadrupole (nqc) tensors of the N2D4.+ cation were determined from angular variation ENDOR measurements in the three orthogonal planes of the crystal. The life tensor obtained for the two equivalent N-14 atoms is very close to that reported in a N2H5HC2O4 single crystal, and the present results support the previous conclusion that the cation has a planar structure at 240 K. The N-14 nqc tensor was estimated using semiempirical methods and also calculated from the field gradients in the LiHzS crystal as evaluated by density functional theory methods. The general agreement with experimental observations further supported the suggested geometrical structure of the N2H4.+ radical. The H-1 and N-14-ENDOR enhancements observed may be due to weakened dipolar interactions between N-14-D-2 and H-1-D-2 leading to increased T-ln relaxations of the N-14 and residual H-1 nuclei of the N2D4.+ cation (and/or other isotopomers) in the deuterated crystals as compared to those in the Li(N2H5)SO4 crystals.
- Published
- 2002
- Full Text
- View/download PDF
37. EPR Dosimetric Properties of 2-Methylalanine: EPR, ENDOR and FT-EPR Investigations
- Author
-
Marco Bonora, Einar Sagstuen, Anders Lund, and Sara Olsson
- Subjects
Aminoisobutyric Acids ,Free Radicals ,Biophysics ,Stopping power ,Sensitivity and Specificity ,law.invention ,Ionizing radiation ,Nuclear magnetic resonance ,law ,Dosimetry ,Radiology, Nuclear Medicine and imaging ,Microwaves ,Radiometry ,Electron paramagnetic resonance ,Range (particle radiation) ,Alanine ,Radiation ,Dosimeter ,Fourier Analysis ,Chemistry ,X-Rays ,Electron Spin Resonance Spectroscopy ,Dose-Response Relationship, Radiation ,Amplitude ,Chemical stability ,Powders ,Crystallization - Abstract
To find an EPR dosimeter material that is sensitive enough for clinical use, the substance 2-methylalanine (2MA) with the chemical structure (CH(3))(2)C(NH(3)(+))COO(-) was tested for its sensitivity to ionizing radiation, dose response, and radical stability over time. At equal and moderate settings of microwave power and modulation amplitude, 2MA was found to be 70% more sensitive than L-alpha-alanine, which is the most common EPR dosimeter material today. The dose response is linear, at least in the dose range of interest (0.5-00 Gy), and the time-dependent variations in signal intensity are very small and may be corrected for easily. The energy dependence of the stopping power and energy absorption was calculated and was found to be similar to that of alanine. The dependence of the signal intensity on microwave power and modulation amplitude was investigated, and the optimal settings were found to be 25 mW (Bruker ER 4102ST) and 12 gauss, respectively. Single crystals of 2MA were analyzed using ENDOR and ENDOR-induced EPR to identify the radiation-induced radicals that formed. Only one radical, in which the amino group is detached from the original molecule, was identified. This radical is obviously dominating and is apparently the only one relevant for dosimetry purposes. The complete set of coupling parameters for three hyperfine couplings is reported. The power saturation properties and spectral line width are ruled by the relaxation times T(1) and T(2). To determine the relaxation times of 2MA, pulsed EPR experiments were performed on single crystals. Two different values of T(1) were obtained, one in the range 1-3 micros, shown to be of importance for the dosimetry properties, and another that is strongly anisotropic with a value between 10 and 35 micros that does not seem to affect the saturation behavior. T(2) was estimated to be of the order of 200-300 ns.
- Published
- 2002
- Full Text
- View/download PDF
38. Lithium formate for EPR dosimetry: radiation-induced radical trapping at low temperatures
- Author
-
Eli O. Hole, Hendrik De Cooman, Einar Sagstuen, André Krivokapić, William H. Nelson, and Siv G. Aalbergsjø
- Subjects
Proton ,Formates ,Free Radicals ,Radical ,Static Electricity ,Biophysics ,Molecular Conformation ,chemistry.chemical_element ,Protonation ,Photochemistry ,law.invention ,law ,Formaldehyde ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Physics::Chemical Physics ,Electron paramagnetic resonance ,Radiometry ,Electron nuclear double resonance ,Radiation ,Molecular Structure ,Electron Spin Resonance Spectroscopy ,Hydrogen Bonding ,Carbon Dioxide ,Cold Temperature ,chemistry ,Models, Chemical ,Lithium ,Magnetic dipole–dipole interaction - Abstract
Radiation-induced primary radicals in lithium formate. A material used in EPR dosimetry have been studied using electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR) and ENDOR-Induced EPR (EIE) techniques. In this study, single crystals were X irradiated at 6-8 K and radical formation at these and higher temperatures were investigated. Periodic density functional theory calculations were used to assist in assigning the radical structures. Mainly two radicals are present at 6 K, the well-known CO2(•-) radical and a protonated electron-gain product. Hyperfine coupling tensors for proton and lithium interactions were obtained for these two radicals and show that the latter radical exists in four conformations with various degrees of bending at the radical center. Pairs of CO2(•-) radicals were also observed and the tensor for the electron-electron dipolar coupling was determined for the strongest coupled pair, which exhibited the largest spectral intensity. Upon warming, both the radical pairs and the reduction product decay, the latter apparently by a transient species. Above 200 K the EPR spectrum was mainly due to the CO2(•-) (mono) radicals, which were previously characterized as the dominant species present at room temperature and which account for the dosimetric EPR signal.
- Published
- 2014
39. Solved?: the reductive radiation chemistry of alanine
- Author
-
Hendrik De Cooman, Einar Sagstuen, Michel Waroquier, Eli O. Hole, and Ewald Pauwels
- Subjects
Models, Molecular ,Free Radicals ,PARAMAGNETIC-RESONANCE ,Electron capture ,Radical ,General Physics and Astronomy ,MINIMUM ENERGY PATHS ,Protonation ,Radiation chemistry ,LOW-TEMPERATURES ,law.invention ,chemistry.chemical_compound ,Computational chemistry ,law ,IRRADIATED SINGLE-CRYSTALS ,Molecule ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Alanine ,Radiochemistry ,Chemistry ,SPACE GAUSSIAN PSEUDOPOTENTIALS ,Electron Spin Resonance Spectroscopy ,L-ALPHA-ALANINE ,DENSITY-FUNCTIONAL CALCULATIONS ,Crystallography ,ELASTIC BAND METHOD ,Physics and Astronomy ,ELECTRON SPIN RESONANCE ,Oxidation-Reduction ,HYPERFINE COUPLING-CONSTANTS ,Methyl group - Abstract
The structural changes throughout the entire reductive radiation-induced pathway of L-alpha-alanine are solved on an atomistic level with the aid of periodic DFT and nudged elastic band (NEB) simulations. This yields unprecedented information on the conformational changes taking place, including the protonation state of the carboxyl group in the "unstable'' and "stable'' alanine radicals and the internal transformation converting these two radical variants at temperatures above 220 K. The structures of all stable radicals were verified by calculating EPR properties and comparing those with experimental data. The variation of the energy throughout the full radiochemical process provides crucial insight into the reason why these structural changes and rearrangements occur. Starting from electron capture, the excess electron quickly localizes on the carbon of a carboxyl group, which pyramidalizes and receives a proton from the amino group of a neighboring alanine molecule, forming a first stable radical species (up to 150 K). In the temperature interval 150-220 K, this radical deaminates and deprotonates at the carboxyl group, the detached amino group undergoes inversion and its methyl group sustains an internal rotation. This yields the so-called "unstable alanine radical''. Above 220 K, triggered by the attachment of an additional proton on the detached amino group, the radical then undergoes an internal rotation in the reverse direction, giving rise to the "stable alanine radical'', which is the final stage in the reductive radiation-induced decay of alanine.
- Published
- 2014
40. Radiation Chemistry of Solid-State Carbohydrates Using EMR
- Author
-
Einar Sagstuen, Hendrik De Cooman, Henk Vrielinck, Freddy Callens, Lund, Anders, and Shiotani, Masaru
- Subjects
Sucrose ,Free Radicals ,Proton ,Chemistry ,Radical ,Trehalose ,Fructose ,Radiation chemistry ,Sorbose ,law.invention ,chemistry.chemical_compound ,Nuclear magnetic resonance ,Physics and Astronomy ,law ,Chemical physics ,Glucose-1-phosphate ,Electron Magnetic Resonance (EPR/ENDOR) ,Radiation damage ,Single crystals ,Diamagnetism ,Radiation Damage ,Electron paramagnetic resonance ,Anisotropy - Abstract
We review our research of the past decade towards identification of radiation-induced radicals in solid state sugars and sugar phosphates. Detailed models of the radical structures are obtained by combining EPR and ENDOR experiments with DFT calculations of g and proton HF tensors, with agreement in their anisotropy serving as most important criterion. Symmetry-related and Schonland ambiguities, which may hamper such identification, are reviewed. Thermally induced transformations of initial radiation damage into more stable radicals can also be monitored in the EPR (and ENDOR) experiments and in principle provide information on stable radical formation mechanisms. Thermal annealing experi-ments reveal, however, that radical recombination and/or diamagnetic radiation damage is also quite important. Analysis strategies are illustrated with research on sucrose. Results on dipotassium glucose-1-phosphate and trehalose dihydrate, fructose and sorbose are also briefly discussed. Our study demonstrates that radiation damage is strongly regio-selective and that certain general principles govern the stable radical formation.
- Published
- 2014
- Full Text
- View/download PDF
41. Experimental and Theoretical Investigation of the Mechanism of Radiation-Induced Radical Formation in Hydrogen-Bonded Cocrystals of 1-Methylcytosine and 5-Fluorouracil
- Author
-
David M. Close, Eli O. Hole, and Einar Sagstuen, William H. Nelson, and Leif A. Eriksson
- Subjects
Radical ,Uracil ,Photochemistry ,Resonance (chemistry) ,Surfaces, Coatings and Films ,law.invention ,chemistry.chemical_compound ,Deprotonation ,chemistry ,law ,Materials Chemistry ,Nucleic acid ,Moiety ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Cytosine - Abstract
The process of stabilizing radiation damage in the base pair of 1-methylcytosine (1-MeC):5-fluorouracil (5-FU) has been investigated. The formation of free radicals in purines and pyrimidines is influenced by the matrix in which they are irradiated. Of particular interest are the systems in which two different nucleic acid bases are complexed, providing situations that approximate the close proximity of bases in nucleic acid polymers. Detailed EPR/electron−nuclear double resonance experiments show that only the N3 protonated cytosine anion and the N1 deprotonated uracil cation are observed in single crystals of 1-MeC:5-FU, X-irradiated, and observed at 10 K. Upon warming one observes a radical formed by net hydrogen addition to C6 on uracil, and an allylic radical on the C4−C5−C6 region of the uracil. No cytosine C5 or C6 H-addition radicals are observed. The implications that free radical damage is transferred from the cytosine moiety to the uracil moiety in 1-MeC:5-FU is discussed. Single point calculat...
- Published
- 2000
- Full Text
- View/download PDF
42. The Effects of Aliphatic (n-Nonane), Naphtenic (1,2,4-Trimethylcyclohexane), and Aromatic (1,2,4-Trimethylbenzene) Hydrocarbons on Respiratory Burst in Human Neutrophil Granulocytes
- Author
-
Einar Sagstuen, Halvor Aarnes, Tor Arne Vestad, Oddvar Myhre, and Frode Fonnum
- Subjects
Indoles ,Neutrophils ,Phospholipase ,Hydroxylation ,Toxicology ,Medicinal chemistry ,Cyclic N-Oxides ,Maleimides ,chemistry.chemical_compound ,1-Butanol ,Onium Compounds ,Cyclohexanes ,Alkanes ,Benzene Derivatives ,Humans ,Estrenes ,Cells, Cultured ,Protein kinase C ,Respiratory Burst ,Pharmacology ,chemistry.chemical_classification ,Reactive oxygen species ,NADPH oxidase ,Phospholipase C ,biology ,Superoxide ,Electron Spin Resonance Spectroscopy ,Pyrrolidinones ,Respiratory burst ,N-Formylmethionine Leucyl-Phenylalanine ,Spectrometry, Fluorescence ,chemistry ,Biochemistry ,biology.protein ,Tetradecanoylphorbol Acetate ,Calcium ,Hydroxyl radical ,Ditiocarb - Abstract
This study investigates the effects of aliphatic (n-heptane, n-nonane), naphtenic (methylcyclohexane, 1,2,4-trimethylcyclohexane (TMCH)), and aromatic (methylbenzene, 1,2,4-trimethylbenzene (TMB)) hydrocarbons on respiratory burst in human granulocytes. The free radical formation was measured as 2,7-dichlorofluorescein diacetate-amplified (DCF) fluorescence, by electron paramagnetic resonance (EPR) spectroscopy and by hydroxylation of 4-hydroxybenzoate. The chemotactic peptide N-formyl-met-leu-phe (fMLP) and phorbol 12-myristate 13-acetate (PMA), a diacylglycerol analogue, were included as positive controls. DCF fluorescence was elevated in a concentration-dependent manner by C9 hydrocarbons. The C7 hydrocarbons did not stimulate respiratory burst in the concentration range examined. The naphtenic hydrocarbon TMCH showed the strongest effect on respiratory burst and was therefore selected for mechanistic studies of this free radical formation. In the absence of extracellular Ca(2+), fluorescence in response to TMCH and fMLP was reduced by 77 and 90%, respectively. Preincubation of the granulocytes with the protein kinase C inhibitor bisindolylmaleimide reduced the DCF fluorescence stimulated with TMCH, fMLP, and PMA by 82, 56, and 90%, respectively. The phospholipase C inhibitor U73122 lowered the TMCH- and fMLP-activated DCF fluorescence by 87 and 76%. In addition, the TMCH- and fMLP-induced DCF fluorescence, after the preincubation with the phospholipase D modulator n-butanol, was lowered by 83 and 52%, respectively. The importance of protein kinase C, phospholipase C, and phospholipase D for elevation of respiratory burst was also demonstrated by the EPR experiments using the spin trap 5-diethoxyphosphoryl-5-methyl-1-pyrroline-N-oxide (DEPMPO). Preincubation with the NADPH oxidase inhibitor diphenyleneiodonium and diethyldithiocarbamate, which inhibits superoxide dismutase, led to an almost complete reduction of DCF fluorescence in response to TMCH, fMLP, and PMA. Preincubation with diethyldithiocarbamate led to the elevation of superoxide adducts of DEPMPO. The hydrocarbons stimulated formation of mainly the superoxide (O(*-)(2)) adduct of DEPMPO (DEPMPO-OOH) but also small amounts of the hydroxyl adduct ((*)OH) (DEPMPO-OH). Using 4-hydroxybenzoate as a hydroxyl radical trap confirmed formation of (*)OH after stimulation with the hydrocarbons. In conclusion, our findings indicate that TMCH-activated respiratory burst is dependent on the Ca(2+)-dependent phospholipase C, phospholipase D, and protein kinase C prior to activation of the NADPH oxidase.
- Published
- 2000
- Full Text
- View/download PDF
43. Weakly Coupled Proton Interactions in the Malonic Acid Radical: Single Crystal ENDOR Analysis and EPR Simulation at Microwave Saturation
- Author
-
Jean Maruani, Anders Lund, Einar Sagstuen, and Yoshiteru Itagaki
- Subjects
Proton ,Chemistry ,Malonic acid ,Photochemistry ,law.invention ,chemistry.chemical_compound ,law ,Physical chemistry ,Irradiation ,Physical and Theoretical Chemistry ,Spectroscopy ,Electron paramagnetic resonance ,Saturation (magnetic) ,Single crystal ,Microwave - Abstract
The alpha-proton hyperfine coupling observed by electron paramagnetic resonance (EPR) spectroscopy on the radical (CH)-C-.(COOH)(2) in irradiated crystals of malonic acid, CH2(COOH)(2), has served ...
- Published
- 2000
- Full Text
- View/download PDF
44. EPR and ENDOR Studies of Deuteron Hyperfine and Quadrupole Coupling in •CD(COOD)2: Experimental and Theoretical Estimates of Electric Field Gradients from an α-Carbon
- Author
-
Audun Sanderud, Yoshiteru Itagaki, Einar Sagstuen, and Anders Lund
- Subjects
Coupling constant ,Chemistry ,Charge density ,Malonic acid ,Molecular physics ,law.invention ,chemistry.chemical_compound ,Computational chemistry ,law ,Quadrupole ,Tensor ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Hyperfine structure ,Electric field gradient - Abstract
In single crystals of malonic acid grown from heavy water, the methylene protons have been partially exchanged with deuterons. Upon X irradiation at room temperature, the (CD)-C-.(COOD)(2) radical is formed in an amount comparable to the (CH)-C-.(COOD): radical species. In the present work, EPR and ENDOR analyses of the a-deuteron hyperfine coupling (hfc) and nuclear quadrupolar coupling (nqc) tensors at room temperature have been performed. The hyperfine coupling tensor is, when scaled with the differences in the nuclear g-factor, almost identical to the a-proton coupling of the (CH)-C-.(COOH)(2) radical at room temperature. The quadrupolar coupling tensor was found to be virtually coaxial with the hyperfine coupling tensor. The quadrupolar coupling constant is 149.8 +/- 1 kHz, and the asymmetry factor eta = 0.092 +/- 0.020. It is known that, at room temperature, the malonic acid radical exhibits thermal motion between two potential energy minima separated by about +/-12 degrees. Assuming that the observed hfe and nqc tensors are the result of thermal avenging between these two conformations of the radical, a simple two-site jump model was used to estimate the rigid-limit tensors. The most significant result obtained was for the nyc tensor, for which the calculations resulted in a quadrupolar coupling constant of 160 kHz and an asymmetry factor eta = 0.026. These values are fairly close to the nqc parameters for the methylene deuterons in malonic acid at low temperature. The quadrupolar coupling tensor has been theoretically modeled using Slater orbitals and formal electronic populations, as well as electron populations obtained from RHF/CI INDO-type calculations. The simple model to compute the electric field gradient at the alpha-deuteron caused by the charge distribution at the sp(2)-hybridized alpha-carbon was found to be as successful as more advanced methods. Furthermore, density functional theoretical (DFT) calculations for both the malonic acid radical and the native malonic acid molecule have been performed. Field gradients calculated by the DFT method significantly overestimate the quadrupolar tensors for both the alpha-deuteron of the radical and the methylene deuterons of the malonic acid molecule. Calculations using electron populations from the RHF/CI INDO calculations show that contributions to the quadrupolar coupling tensor from electrons and nuclei beyond the nearest-neighbor atom of the Jeuteron are significant.
- Published
- 2000
- Full Text
- View/download PDF
45. ENDOR study of a thiocytosine oxidation product in cytosine monohydrate crystals doped with 2-thiocytosine, X-irradiated at 15 K
- Author
-
Eli O. Hole, Krešimir Sanković, Einar Sagstuen, and Janko N. Herak
- Subjects
Proton ,Radical ,General Physics and Astronomy ,Crystal structure ,Photochemistry ,Spectral line ,law.invention ,chemistry.chemical_compound ,Crystallography ,chemistry ,law ,Molecule ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Spectroscopy ,Cytosine - Abstract
ENDOR spectroscopy was used for the analysis of radiation-induced electron-loss radicals in thiocytosine. The radicals were induced by X-irradiating single crystals of cytosine monohydrate, substitutionally doped with 2-thiocytosine. X-irradiation and measurements were carried out at about 15 K. The electron-loss radicals were found to be associated with the thiocytosine molecules in a proportion much above the thiocytosine/cytosine ratio in the lattice; the concentration enhancement factor was estimated to be more than 45. The significantly elevated spectroscopic splitting factor (g) for the sulfur-centered radicals in the EPR spectra make these radicals easily discriminated from the spectra of other radicals present in the system. The present study is the first detailed ENDOR study of one of the sulfur-centered radicals selectively formed in an appropriately related crystal lattice as a host. Six different intra- and inter-molecular proton couplings were detected. The respective coupling tensors were determined and the couplings were assigned to protons in the thiocytosine N1-deprotonated cation radical (S1) itself and in its environment. The structure of radical S1 is analogous to that of the related cytosine radical in irradiated pure crystals of cytosine monohydrate. However, the two radicals differ in their g values and in the spin density distribution. In the thiocytosine-derived radical gmax(S1) = 2.132, compared with 2.005 for the corresponding radical in cytosine. In radical S1 most of the spin density (∽65–70%) is located at sulfur and little at the ring atoms: 0.21 at C5 and about 0.14 at N1, compared with spin densities of 0.58 at C5 and 0.30 at N1 in the corresponding radical in cytosine. A concentration enhancement of >45 suggests long-range hole transfer through the lattice. Assuming that this takes place mainly by the transfer through vertically overlapping (stacked) bases, preliminary considerations show that the effectie range for the hole transfer is more than 22 base separations, or more than 7 nm.
- Published
- 2000
- Full Text
- View/download PDF
46. Effects of the Solvent 1,2,4-Trimethylcyclohexane on Respiratory Burst in Human Neutrophil Granulocytes: A Chemiluminescence and Electron Paramagnetic Resonance Spectrometry Study
- Author
-
Einar Sagstuen, Oddvar Myhre, Frode Fonnum, Halvor Aarnes, and Tor Arne Vestad
- Subjects
Luminescent Measurements ,Human neutrophil ,Neutrophils ,Phosphodiesterase Inhibitors ,In Vitro Techniques ,Mass spectrometry ,General Biochemistry, Genetics and Molecular Biology ,law.invention ,Nuclear magnetic resonance ,History and Philosophy of Science ,Cyclohexanes ,law ,Humans ,Electron paramagnetic resonance ,Respiratory Burst ,Chemiluminescence ,Chemistry ,General Neuroscience ,Radiochemistry ,Electron Spin Resonance Spectroscopy ,Respiratory burst ,N-Formylmethionine Leucyl-Phenylalanine ,Solvent ,Fatty Acids, Unsaturated ,Solvents ,Tetradecanoylphorbol Acetate - Published
- 1999
- Full Text
- View/download PDF
47. ESR studies of the effect of zeolite structures on motional dynamics of NO2
- Author
-
Haitao Li, Einar Sagstuen, Hidenori Yahiro, Kenji Komaguchi, Anders Lund, and Masaru Shiotani
- Subjects
Chemistry ,Diffusion ,General Chemistry ,Crystal structure ,Condensed Matter Physics ,Molecular sieve ,Mordenite ,law.invention ,Nuclear magnetic resonance ,Ferrierite ,Mechanics of Materials ,law ,Physical chemistry ,General Materials Science ,Spectroscopy ,Zeolite ,Electron paramagnetic resonance - Abstract
Electron spin resonance (ESR) spectroscopy was used to study the effect of zeolite structure on the motional dynamics of NO 2 adsorbed on the zeolites. The temperature-dependent ESR spectral line shapes were quantitatively analyzed using the slow-motion ESR theory. It was observed that the motional dynamics of NO 2 is strongly dependent on the structure of the zeolite (Beta-type, ZSM-5, mordenite, L-type and ferrierite zeolites). The following important observations were made. (1) In zeolites with similar channel structures, the diffusion rate of NO 2 is proportional to the channel size, and the order of the diffusion rates is Beta-type>ZSM-5>ferrierite and L-type>mordenite. (2) The diffusion of NO 2 is faster in the zeolites with multi-dimensional channels (Beta-type, ZSM-5 and ferrierite) than that in those with uni-dimensional channels (L-type and mordenite).
- Published
- 1999
- Full Text
- View/download PDF
48. EPR and ENDOR Studies of Single Crystals of α-Glycine X-ray Irradiated at 295 K
- Author
-
Einar Sagstuen and Audun Sanderud and
- Subjects
chemistry.chemical_classification ,Dimer ,Radical ,X-ray ,Photochemistry ,Spectral line ,Surfaces, Coatings and Films ,law.invention ,Amino acid ,chemistry.chemical_compound ,Crystallography ,chemistry ,law ,Glycine ,Materials Chemistry ,Irradiation ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance - Abstract
Single crystals of the amino acid α-glycine N−CH2−COO- were X-ray irradiated at 280 K and studied at 295 K and at 100 K using EPR, ENDOR, and EIE techniques. Five radicals were detected and characterized. Two of these are well known from previous studies, the oxidation product N−ĊH−COO- (radical I) and the reduction product ĊH2−COO- (radical II). It is shown that at 295 K the ENDOR and EIE spectra from radical I are characteristic of efficient W1x cross relaxation induced by rapid rotation of the amino group. This allows for the determination of the absolute signs of the hyperfine coupling constants of radical I. The other three radicals are two geometrical conformations of the product H2N−ĊH−COOH (radicals III and IV) and a species suggested to be the dimer product N−CH2−CO−ĊH−COO- (radical V). Radical III exhibits spectral parameters related to those previously reported by M. Brustolon et al. (J. Phys. Chem. 1997, 101, 4887). However, on the basis of our analysis of ENDOR and EIE spectra from normal as ...
- Published
- 1998
- Full Text
- View/download PDF
49. EPR and ENDOR Studies of X-Irradiated Single Crystals of Deoxycytidine 5‘-Phosphate Monohydrate at 10 and 77 K
- Author
-
Einar Sagstuen, David M. Close, William H. Nelson, and Eli O. Hole
- Subjects
Proton ,Chemistry ,Radical ,Inorganic chemistry ,Protonation ,Redox ,law.invention ,Crystallography ,Deprotonation ,law ,Molecule ,Physical and Theoretical Chemistry ,Electron paramagnetic resonance ,Hyperfine structure - Abstract
The EPR spectra of single crystals of deoxycytidine 5‘-phosphate monohydrate (5‘dCMP), X-irradiated at 10 K, exhibit signals from several distinct radical species. Analysis of the ENDOR spectra from two of these radicals indicates that these result from oxidation and reduction of the cytosine base. The reduced species exhibits hyperfine coupling to the C6−Hα proton, and an additional small exchangeable hyperfine coupling from the N3−H proton. No additional couplings that may be associated with protonation of the amino group have been observed. Since the native molecule is protonated at N3, it appears that reduction of the cytosine base does not result in any further protonation. The oxidized species exhibits hyperfine couplings to C5−Hα and C1‘−Hβ, and two small exchangeable couplings from the C4−NH2 protons. Since no hyperfine coupling to N3−H was observed, the oxidized species is believed to be the N3−H deprotonated cation. At high X-ray dose there is also evidence for both C5 and C6 H-addition radicals...
- Published
- 1998
- Full Text
- View/download PDF
50. A simple method for estimating dose uncertainty in ESR/alanine dosimetry
- Author
-
Einar Sagstuen, Eli O. Hole, and E.S. Bergstrand
- Subjects
Variance method ,Radiation ,Simple (abstract algebra) ,Calibration curve ,Chemistry ,Range (statistics) ,Econometrics ,Calibration ,Dosimetry ,Applied mathematics - Abstract
ESR/alanine dosimetry is widely used as a reference, transfer and routine standard dosimetry system. In order to use it as a reliable standard, or in every situation where a high degree of accuracy is needed, the calculation of the absolute dose uncertainty is required. Even though general guides for estimating dose uncertainties are available, the actual calculation may be rather complicated. In this paper, an analytical expression for the dose uncertainty for the ESR/alanine dosimetry system is presented, and shown to be rather simple to use. The treatment is valid for doses below ca. 103 Gy. An alternative procedure should be followed if the calibration dose uncertainties are very varying, e.g. when the calibration dose range is wide. This procedure, the so-called effective variance method [Orear, J. (1982) Am. J. Phys. 50, 912], is described. Both methods are supplied with one numerical example. Suggestions on obtaining calibration curve parameters and their uncertainties, are emphasized.
- Published
- 1998
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.