41 results on '"Durif C"'
Search Results
2. The evolving story of catadromy in the European eel (Anguilla anguilla)
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Durif, C. M. F., Arts, M., Bertolini, F., Cresci, A., Daverat, F., Karlsbakk, E., Koprivnikar, J., Moland, E., Olsen, E. M., Power, M., Parzanini, C., Rohtla, M., Skiftesvik, A. B., Thorstad, E., Vollestad, L. A., Browman, H., Durif, C. M. F., Arts, M., Bertolini, F., Cresci, A., Daverat, F., Karlsbakk, E., Koprivnikar, J., Moland, E., Olsen, E. M., Power, M., Parzanini, C., Rohtla, M., Skiftesvik, A. B., Thorstad, E., Vollestad, L. A., and Browman, H.
- Abstract
Anguillid eels were once considered to be the classic example of catadromy. However, alternative life cycles have been reported, including skipping the freshwater phase and habitat shifting between fresh, brackish, and saltwater throughout the growth phase. There is a lack of knowledge regarding these alternate life strategies, for example, the proportion of individuals in the population that adopt them compared to classic catadromy. We provide a description of these alternate life cycle strategies in temperate anguillids, their possible drivers, and the methods available to investigate them. These methods (lethal and non-lethal), include otolith microchemistry, fatty acid and stable isotope analyses, parasite identification, blood transcriptomics, and electronic tags. We argue that since the current management framework for the European eel and other temperate eels is based mainly on the freshwater component of the population, it ignores eels growing in saline waters. Many of the factors that are thought to be responsible for the precipitous decline of the eel population are more prevalent in freshwater systems. Therefore, the contribution of saline eels may be more important than currently estimated. The habitat-shifting ability of eels may be all the more crucial for the persistence and recovery of those species that are endangered.
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- 2023
3. Impact of polyethylene microplastics on human gut microbiota as assessed in an in vitro gut model
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Fournier, E., primary, Etienne-Mesmin, L., additional, Denis, S., additional, Verdier, C., additional, Chalancon, S., additional, Durif, C., additional, Uriot, O., additional, Mercier-Bonin, M., additional, and Blanquet-Diot, S., additional
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- 2021
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4. Infection of the planktonic copepod Calanus finmarchicus by the parasitic dinoflagellate, Blastodinium spp: effects on grazing, respiration, fecundity and fecal pellet production
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Fields, D. M., Runge, J. A., Thompson, C., Shema, S. D., Bjelland, R. M., Durif, C. M. F., Skiftesvik, A. B., and Browman, H. I.
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- 2015
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5. The swimming kinematics of larval Atlantic cod, Gadus morhua L., are resilient to elevated seawater pCO2
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Maneja, R. H., Frommel, A. Y., Browman, H. I., Clemmesen, C., Geffen, A. J., Folkvord, A., Piatkowski, U., Durif, C. M. F., Bjelland, R., and Skiftesvik, A. B.
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- 2013
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6. A simplified method to estimate body growth parameters of the European eel Anguilla anguilla
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Melia', PACO VASCO ALDO, Crivelli, A. J., Durif, C., Poole, R., Bevacqua, D., Politecnico di Milano [Milan] (POLIMI), Centre de Recherche de la Tour du Valat (CRTV), Norwegian Institute of Marine Research, Marine Institute, Unité de recherche Plantes et Systèmes de Culture Horticoles (PSH), and Institut National de la Recherche Agronomique (INRA)
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somatic growth variation ,FRESH-WATER ENVIRONMENTS ,SEX-DIFFERENTIATION ,[SDV]Life Sciences [q-bio] ,length at age ,growth curves ,AGE ,BRACKISH ,SIZE ,AUT ,sexual dimorphism ,[SDE]Environmental Sciences ,LENGTH ,OTOLITHS ,GONAD - Abstract
International audience; A simple approach is proposed to fit a body growth model for the European eel Anguilla anguilla to data-poor case studies. The model is a modified von Bertalanffy curve allowing for delayed sex determination and sexual dimorphism. The proposed procedure provides preliminary estimates of model parameters on the basis of average age and body length of silver eels. (C) 2014 The Fisheries Society of the British Isles
- Published
- 2014
7. Spatial Patterns and Temperature Predictions of Tuna Fatty Acids: Tracing Essential Nutrients and Changes in Primary Producers
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Durif, C, Pethybridge, HR, Parrish, CC, Morrongiello, J, Young, JW, Farley, JH, Gunasekera, RM, Nichols, PD, Durif, C, Pethybridge, HR, Parrish, CC, Morrongiello, J, Young, JW, Farley, JH, Gunasekera, RM, and Nichols, PD
- Abstract
Fatty acids are among the least understood nutrients in marine environments, despite their profile as key energy components of food webs and that they are essential to all life forms. Presented here is a novel approach to predict the spatial-temporal distributions of fatty acids in marine resources using generalized additive mixed models. Fatty acid tracers (FAT) of key primary producers, nutritional condition indices and concentrations of two essential long-chain (≥C20) omega-3 fatty acids (EFA) measured in muscle of albacore tuna, Thunnus alalunga, sampled in the south-west Pacific Ocean were response variables. Predictive variables were: location, time, sea surface temperature (SST) and chlorophyll-a (Chla), and phytoplankton biomass at time of catch and curved fork length. The best model fit for all fatty acid parameters included fish length and SST. The first oceanographic contour maps of EFA and FAT (FATscapes) were produced and demonstrated clear geographical gradients in the study region. Predicted changes in all fatty acid parameters reflected shifts in the size-structure of dominant primary producers. Model projections show that the supply and availability of EFA are likely to be negatively affected by increases in SST especially in temperate waters where a 12% reduction in both total fatty acid content and EFA proportions are predicted. Such changes will have large implications for the availability of energy and associated health benefits to high-order consumers. Results convey new concerns on impacts of projected climate change on fish-derived EFA in marine systems.
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- 2015
8. Passage, rite et tentative de suicide chez l'adolescent
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DEBOUT, M., primary and DURIF, C., additional
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- 1983
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9. Infection of the planktonic copepod Calanus finmarchicus by the parasitic dinoflagellate, Blastodinium spp: effects on grazing, respiration, fecundity and fecal pellet production
- Author
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Fields, D. M., primary, Runge, J. A., additional, Thompson, C., additional, Shema, S. D., additional, Bjelland, R. M., additional, Durif, C. M. F., additional, Skiftesvik, A. B., additional, and Browman, H. I., additional
- Published
- 2014
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10. A simplified method to estimate body growth parameters of the European eel Anguilla anguilla
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Melià, P., primary, Crivelli, A. J., additional, Durif, C., additional, Poole, R., additional, and Bevacqua, D., additional
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- 2014
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11. Ocean acidification may cause otolith hypercalcification and changes in swimming behaviour in larval Atlantic cod, Gadus morhua L.
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Maneja, Rommel, Frommel, Andrea, Browman, H. I., Geffen, A. J., Folkvord, A., Piatkowski, Uwe, Durif, C. M. F., Bjelland, R., Skiftesvik, A. B., Clemmesen, Catriona, Maneja, Rommel, Frommel, Andrea, Browman, H. I., Geffen, A. J., Folkvord, A., Piatkowski, Uwe, Durif, C. M. F., Bjelland, R., Skiftesvik, A. B., and Clemmesen, Catriona
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- 2012
12. Effects of ocean acidification on boreal and sub-Arctic fish larvae and zooplankton
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Browman, H. I., Maneja, Rommel, Durif, C. M. F., Bjelland, R. M., Skiftesvik, A. B., Fields, D. M., Shema, S., Runge, J. A., Browman, H. I., Maneja, Rommel, Durif, C. M. F., Bjelland, R. M., Skiftesvik, A. B., Fields, D. M., Shema, S., and Runge, J. A.
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- 2012
13. Effects of ocean acidification on the swimming kinematics of larval Atlantic cod (Gadus morhua L.) and Atlantic herring (Clupea harengus L.)
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Maneja, Rommel, Frommel, Andrea, Browman, H. I., Clemmesen, Catriona, Geffen, A. J., Folkvord, A., Piatkowski, Uwe, Durif, C. M. F., Bjelland, R., Skiftesvik, A. B., Maneja, Rommel, Frommel, Andrea, Browman, H. I., Clemmesen, Catriona, Geffen, A. J., Folkvord, A., Piatkowski, Uwe, Durif, C. M. F., Bjelland, R., and Skiftesvik, A. B.
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- 2012
14. HOT96 news
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Gaill, Francoise, Felbeck, Horst, Desbruyeres, Daniel, Lallier, François, Toulmond, A., Briand, Patrick, Brulport, Jean-Pierre, Caprais, Jean-Claude, Chevaldonné, P., Coail, Jean-Yves, Alayse, Anne-Marie, Cosson, R., Crassous, Philippe, Delachambre, J., Durif, C., Echardour, L., Hervé, Gwenaël, Hourdez, Stéphane, Jollivet, D., Kerdoncuff, Jacques, Khripounoff, Alexis, Lechaire, J.P., Pruski, Audrey, Ravaux, Juliette, Sarradin, Pierre-Marie, Shillito, Bruce, Toullec, J.Y., Arndt, C., Fisher, C., Lutz, Richard, Childress, J., Scripps Institution of Oceanography (SIO - UC San Diego), University of California [San Diego] (UC San Diego), University of California (UC)-University of California (UC), Laboratoire Environnement Profond (LEP), Etudes des Ecosystèmes Profonds (EEP), Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Adaptation et Biologie des Invertébrés en Conditions Extrêmes (ABICE), Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff [Roscoff] (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff [Roscoff] (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Diversité, évolution et écologie fonctionnelle marine (DIMAR), Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS), Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Ressources aquatiques continentales (UR RABX), Centre national du machinisme agricole, du génie rural, des eaux et forêts (CEMAGREF), inconnu, Inconnu, Laboratoire d'Ecogéochimie des environnements benthiques (LECOB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Observatoire océanologique de Banyuls (OOB), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Systématique, adaptation, évolution (SAE), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Université Pierre et Marie Curie - Paris 6 (UPMC), University of Florida [Gainesville] (UF), and Hitachi San Jose Research Center
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[SDU.OCEAN]Sciences of the Universe [physics]/Ocean, Atmosphere ,ComputingMilieux_MISCELLANEOUS ,[SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis - Abstract
International audience
- Published
- 1996
15. HOT 96 News
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Gaill, Francoise, Felbeck, Horst, Desbruyeres, Daniel, Lallier, Francois, Toulmond, A., Alayse, Anne-marie, Briand, Patrick, Brulport, Jean-pierre, Caprais, Jean-claude, Chevaldonne, P., Coail, Jean-yves, Cosson, R., Crassous, Philippe, Delachambre, J., Durif, C., Echardour, L., Herve, G., Hourdez, Stephane, Jollivet, D., Kerdoncuff, Jacques, Khripounoff, Alexis, Lechaire, J.p., Pruski, Audrey, Ravaux, Juliette, Sarradin, Pierre-marie, Shillito, Bruce, Toullec, J.y., Arndt, C., Fisher, C., Lutz, Richard, and Childress, J.
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- 1996
16. rol van de schildklier bij koudbloedigen
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Ginneken, V. van, Durif, C., Thillart, G. van den, Ginneken, V. van, Durif, C., and Thillart, G. van den
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Bij warmbloedigen speelt de schildklier een rol in de warmtehuishouding (calorigeen hormoon). In dit artikel wordt de rol besproken van de schildklier bij a) het schier worden van paling (metamorfose), b) schildklier-hormoon-fluctuaties van paling in het buitenwater over het seizoen, c) de rol van de schildklier in de warmtehuishouding, is het ook een calorigeen hormoon of alleen een metamorfose hormoon?
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- 2005
17. The swimming kinematics of larval Atlantic cod, Gadus morhua L., are resilient to elevated seawater pCO2
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Maneja, R. H., primary, Frommel, A. Y., additional, Browman, H. I., additional, Clemmesen, C., additional, Geffen, A. J., additional, Folkvord, A., additional, Piatkowski, U., additional, Durif, C. M. F., additional, Bjelland, R., additional, and Skiftesvik, A. B., additional
- Published
- 2012
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18. Predicting downstream migration of silver eels in a large river catchment based on commercial fishery data
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DURIF, C. M. F., primary and ELIE, P., additional
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- 2008
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19. The silvering process of Anguilla anguilla: a new classification from the yellow resident to the silver migrating stage
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Durif, C., primary, Dufour, S., additional, and Elie, P., additional
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- 2005
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20. Tests of two types of bypass for downstream migration of eels at a small hydroelectric power plant
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Gosset, C., primary, Travade, F., additional, Durif, C., additional, Rives, J., additional, and Elie, P., additional
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- 2005
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21. The silvering process ofAnguilla anguilla: a new classification from the yellow resident to the silver migrating stage.
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Durif, C., Dufour, S., and Elie, P.
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EELS , *OSTEICHTHYES , *RANDOM variables , *DECISION making , *ANALYSIS of variance , *MULTIVARIATE analysis - Abstract
The identification of five stages for female and two stages for male eelsAnguilla anguillausing multivariate analysis was carried out on a large sample of individuals collected at six different locations in France. Stages corresponded to a growth phase(stages I and II), a pre-migrant phase(III) and two migrating phases(IV and V). It is likely that an important period of growth triggered silvering through the production of growth hormone(GH) in stage III eels. In migrating eels gonad development, gonadotropin hormone(GTH-II) production and increase of eye surface were similar at all sites. Differences among locations were found in gut regression and pectoral fin length. As variability for these increased with the size of the watershed and values were highest for the most downstream locations, fin length and gut regression may indicate the time since an eel started its migration. [ABSTRACT FROM AUTHOR]
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- 2005
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22. Single-unit responses in the auditory cortex of monkeys performing a conditional acousticomotor task
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Durif, C., Christophe Jouffrais, Rouiller, E. M., Unit of Physiology and Program in Neurosciences, Albert-Ludwigs-Universität Freiburg-Department of Medicine, Faculty of Sciences, and Jouffrais, Christophe
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[SCCO.NEUR]Cognitive science/Neuroscience ,[SCCO.NEUR] Cognitive science/Neuroscience - Abstract
International audience; The general goal of the present study was to assess the response properties to tones of single neurons in the auditory cortex (primary auditory area, A1, and middle lateral auditory belt, ML) of two macaque monkeys while performing an acousticomotor discrimination task requiring a controlled level of attention and motivation. For each neuron, an approximation of the frequency receptive field (FRF) was first established. Second, based on the FRF, sets of paired tone frequencies were defined in which two different tone frequencies had to be associated by the monkey, following a trial and error strategy, to a left or a right key-press with the left arm. After acquisition of the association, the two tones of the pair were presented randomly ("instruction stimulus") and, if the monkey touched the correct key, the stimulus was repeated ("confirmation stimulus") and a reward was delivered. The majority of units (63%) had a FRF formed by multiple peaks, whereas 25% and 12% of units exhibited a simple U-shaped FRF and a "mosaic" FRF, composed of several separated zones of response, respectively. Five principal response patterns were observed: On, Off, On-Off, Sustained, and Inhibition. In relation to the acousticomotor association task, some auditory cortical neurons (33%) exhibited a different response to the same stimulus when presented, in the same trials, as instruction or as confirmation. It was also observed that the response to the same instruction stimulus could differ when comparing correct trials with erroneous trials (wrong motor response). In conclusion, the response properties of auditory cortical neurons in behaving monkeys are strongly dependent on the physical parameters of sounds (frequency, intensity, etc.) as indicated by FRF characteristics, but a substantial influence of the behavioral context and performance may also play an important role.
23. Impact of Western Diet on Enterohemorrhagic Escherichia coli Colonization in the Human In Vitro Mucosal Artificial Colon as Mediated by Gut Microbiota.
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O'Sullivan D, Arora T, Durif C, Uriot O, Brun M, Riu M, Foguet-Romero E, Samarra I, Domingo-Almenara X, Gahan CGM, Etienne-Mesmin L, and Blanquet-Diot S
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- Humans, Escherichia coli Infections microbiology, Intestinal Mucosa microbiology, Intestinal Mucosa metabolism, Fatty Acids, Volatile metabolism, Bile Acids and Salts metabolism, Escherichia coli O157, Gastrointestinal Microbiome physiology, Diet, Western adverse effects, Enterohemorrhagic Escherichia coli, Colon microbiology, Feces microbiology
- Abstract
Enterohemorrhagic Escherichia coli (EHEC) is a major food-borne pathogen that causes human disease ranging from diarrhea to life-threatening complications. Accumulating evidence demonstrates that the Western diet enhances the susceptibility to enteric infection in mice, but the effect of diet on EHEC colonization and the role of human gut microbiota remains unknown. Our research aimed to investigate the effects of a Standard versus a Western diet on EHEC colonization in the human in vitro Mucosal ARtificial COLon (M-ARCOL) and the associated changes in the gut microbiota composition and activities. After donor selection using simplified fecal batch experiments, two M-ARCOL bioreactors were inoculated with a human fecal sample ( n = 4) and were run in parallel, one receiving a Standard diet, the other a Western diet and infected with EHEC O157:H7 strain EDL933. EHEC colonization was dependent on the donor and diet in the luminal samples, but was maintained in the mucosal compartment without elimination, suggesting a favorable niche for the pathogen, and may act as a reservoir. The Western diet also impacted the bacterial short-chain fatty acid and bile acid profiles, with a possible link between high butyrate concentrations and prolonged EHEC colonization. The work demonstrates the application of a complex in vitro model to provide insights into diet, microbiota, and pathogen interactions in the human gut.
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- 2024
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24. Oil droplet fouling on lesser sandeel (Ammodytes marinus) eggshells does not enhance the crude oil induced developmental toxicity.
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Sørhus E, Bjelland R, Durif C, Johnsen E, Donald CE, Meier S, Nordtug T, Vikebø FB, and Perrichon P
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- Animals, Egg Shell, Ecosystem, Water, Petroleum toxicity, Water Pollutants, Chemical toxicity, Petroleum Pollution
- Abstract
The oil industry's expansion and increased operational activity at older installations, along with their demolition, contribute to rising cumulative pollution and a heightened risk of accidental oil spills. The lesser sandeel (Ammodytes marinus) is a keystone prey species in the North Sea and coastal systems. Their eggs adhere to the seabed substrate making them particularly vulnerable to oil exposure during embryonic development. We evaluated the sensitivity of sandeel embryos to crude oil in a laboratory by exposing them to dispersed oil at concentrations of 0, 15, 50, and 150 µg/L oil between 2 and 16 days post-fertilization. We assessed water and tissue concentrations of THC and tPAH, cyp1a expression, lipid distribution in the eyes, head and trunk, and morphological and functional deformities. Oil droplets accumulated on the eggshell in all oil treatment groups, to which the embryo responded by a dose-dependent rise in cyp1a expression. The oil exposure led to only minor sublethal deformities in the upper jaw and otic vesicle. The findings suggest that lesser sandeel embryos are resilient to crude oil exposure. The lowest observed effect level documented in this study was 36 µg THC/L and 3 µg tPAH/L. The inclusion of these species-specific data in risk assessment models will enhance the precision of risk evaluations for the North Atlantic ecosystems., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2024
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25. Development of a new antibiotic-induced dysbiosis model of the canine colonic microbiota.
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Deschamps C, Apper E, Brun M, Durif C, Denis S, Humbert D, and Blanquet-Diot S
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- Dogs, Animals, Humans, Dysbiosis chemically induced, Intestinal Mucosa microbiology, Colon microbiology, Metronidazole pharmacology, Anti-Bacterial Agents adverse effects, Microbiota
- Abstract
As in humans, antibiotics are widely used in dogs to treat gastrointestinal infections, contributing to the global burden of antimicrobial resistance on both human and animal health. Close contact between pets and their owners can lead to horizontal transfer of gut microbes, including transmission of antibiotic resistance. Nevertheless, until now, the impact of antibiotics on the canine gut microbiota has been poorly described. The aim of this study was to adapt the canine mucosal artificial colon (CANIM-ARCOL) model, reproducing the main nutritional, physicochemical and microbial parameters found in the large intestine of the dog to simulate an antibiotic-induced perturbation. Following initial investigation of five antibiotic cocktails at in-field doses, a 5-day regimen of metronidazole/enrofloxacin (ME) was selected for further model development. Two CANIM-ARCOL bioreactors were inoculated with a faecal sample (n=2 donors) and run in parallel for 26 days under control or antibiotic conditions. ME reduced microbial diversity and induced major shifts in bacterial populations, leading to a state of dysbiosis characterized by an increase in the relative abundance of Streptococcaceae, Lactobacillaceae and Enterobacteriaceae, and a decrease in the relative abundance of Bacteroidaceae, Fusobacteriota and Clostridiaceae. Overall, mucus-associated microbiota were less impacted by antibiotics than luminal microbes. Microbial alterations were associated with drastic decreases in gas production and short-chain fatty acid concentrations. Finally, the model was well validated through in-vitro-in-vivo comparisons in a study in dogs. The CANIM-ARCOL model provides a relevant platform as an alternative to in-vivo assays for an in-depth understanding of antibiotic-microbiota interactions and further testing of restoration strategies at individual level., (Copyright © 2024 The Author(s). Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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26. The small intestine: dining table of host-microbiota meetings.
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Delbaere K, Roegiers I, Bron A, Durif C, Van de Wiele T, Blanquet-Diot S, and Marinelli L
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- Diet, Intestine, Small microbiology, Microbiota
- Abstract
Growing evidence suggests the importance of the small intestinal bacteria in the diet-host-microbiota dialogue in various facets of health and disease. Yet, this body site is still poorly explored and its ecology and mechanisms of interaction with the host are just starting to be unraveled. In this review, we describe the current knowledge on the small intestinal ecology, its composition and diversity, and how the intestinal bacteria in homeostatic conditions participate in nutrient digestion and absorption. We illustrate the importance of a controlled bacterial density and of the preservation of absorptive surface for the host's nutritional status. In particular, we discuss these aspects of the small intestinal environment in the framework of two disease conditions, namely small intestinal bacterial overgrowth (SIBO) and short bowel syndrome (SBS). We also detail in vivo, ex vivo, and in vitro models developed to simulate the small intestinal environment, some applied for (diet-)host-bacteria interaction studies. Lastly, we highlight recent technological, medical, and scientific advances applicable to investigate this complex and yet understudied body environment to broaden our knowledge in support of further progress in the medical practice, and to proceed towards the integration of the (small)intestinal bacteria in personalized therapeutic approaches., (© The Author(s) 2023. Published by Oxford University Press on behalf of FEMS.)
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- 2023
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27. Global, regional, and cryptic population structure in a high gene-flow transatlantic fish.
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Jansson E, Faust E, Bekkevold D, Quintela M, Durif C, Halvorsen KT, Dahle G, Pampoulie C, Kennedy J, Whittaker B, Unneland L, Post S, André C, and Glover KA
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- Animals, Fishes genetics, Iceland, Aquaculture, Greenland, Perciformes, Fish Diseases
- Abstract
Lumpfish (Cyclopterus lumpus) is a transatlantic marine fish displaying large population sizes and a high potential for dispersal and gene-flow. These features are expected to result in weak population structure. Here, we investigated population genetic structure of lumpfish throughout its natural distribution in the North Atlantic using two approaches: I) 4,393 genome wide SNPs and 95 individuals from 10 locations, and II) 139 discriminatory SNPs and 1,669 individuals from 40 locations. Both approaches identified extensive population genetic structuring with a major split between the East and West Atlantic and a distinct Baltic Sea population, as well as further differentiation of lumpfish from the English Channel, Iceland, and Greenland. The discriminatory loci displayed ~2-5 times higher divergence than the genome wide approach, revealing further evidence of local population substructures. Lumpfish from Isfjorden in Svalbard were highly distinct but resembled most fish from Greenland. The Kattegat area in the Baltic transition zone, formed a previously undescribed distinct genetic group. Also, further subdivision was detected within North America, Iceland, West Greenland, Barents Sea, and Norway. Although lumpfish have considerable potential for dispersal and gene-flow, the observed high levels of population structuring throughout the Atlantic suggests that this species may have a natal homing behavior and local populations with adaptive differences. This fine-scale population structure calls for consideration when defining management units for exploitation of lumpfish stocks and in decisions related to sourcing and moving lumpfish for cleaner fish use in salmonid aquaculture., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Jansson et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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28. Microplastics: What happens in the human digestive tract? First evidences in adults using in vitro gut models.
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Fournier E, Leveque M, Ruiz P, Ratel J, Durif C, Chalancon S, Amiard F, Edely M, Bezirard V, Gaultier E, Lamas B, Houdeau E, Lagarde F, Engel E, Etienne-Mesmin L, Blanquet-Diot S, and Mercier-Bonin M
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- Humans, Plastics toxicity, Polyethylene toxicity, Bacteria, Fatty Acids, Volatile, Intestinal Mucosa, Mucins, Indoles, Microplastics toxicity, Volatile Organic Compounds
- Abstract
Microplastics (MPs) are ubiquitous in the environment and humans are inevitably exposed to them. However, the effects of MPs in the human digestive environment are largely unknown. The aim of our study was to investigate the impact of repeated exposure to polyethylene (PE) MPs on the human gut microbiota and intestinal barrier using, under adult conditions, the Mucosal Artificial Colon (M-ARCOL) model, coupled with a co-culture of intestinal epithelial and mucus-secreting cells. The composition of the luminal and mucosal gut microbiota was determined by 16S metabarcoding and microbial activities were characterized by gas, short chain fatty acid, volatolomic and AhR activity analyses. Gut barrier integrity was assessed via intestinal permeability, inflammation and mucin synthesis. First, exposure to PE MPs induced donor-dependent effects. Second, an increase in abundances of potentially harmful pathobionts, Desulfovibrionaceae and Enterobacteriaceae, and a decrease in beneficial bacteria such as Christensenellaceae and Akkermansiaceae were observed. These bacterial shifts were associated with changes in volatile organic compounds profiles, notably characterized by increased indole 3-methyl- production. Finally, no significant impact of PE MPs mediated by changes in gut microbial metabolites was reported on the intestinal barrier. Given these adverse effects of repeated ingestion of PE MPs on the human gut microbiota, studying at-risk populations like infants would be a valuable advance., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2023
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29. Role of mucus-bacteria interactions in Enterotoxigenic Escherichia coli (ETEC) H10407 virulence and interplay with human microbiome.
- Author
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Sauvaitre T, Van Landuyt J, Durif C, Roussel C, Sivignon A, Chalancon S, Uriot O, Van Herreweghen F, Van de Wiele T, Etienne-Mesmin L, and Blanquet-Diot S
- Subjects
- Humans, Interleukin-8 genetics, Virulence, Diarrhea, Caco-2 Cells, Travel, Bacteria, Mucus, Mucins, Enterotoxigenic Escherichia coli physiology, Escherichia coli Infections microbiology, Microbiota
- Abstract
The intestinal mucus layer has a dual role in human health constituting a well-known microbial niche that supports gut microbiota maintenance but also acting as a physical barrier against enteric pathogens. Enterotoxigenic Escherichia coli (ETEC), the major agent responsible for traveler's diarrhea, is able to bind and degrade intestinal mucins, representing an important but understudied virulent trait of the pathogen. Using a set of complementary in vitro approaches simulating the human digestive environment, this study aimed to describe how the mucus microenvironment could shape different aspects of the human ETEC strain H10407 pathophysiology, namely its survival, adhesion, virulence gene expression, interleukin-8 induction and interactions with human fecal microbiota. Using the TNO gastrointestinal model (TIM-1) simulating the physicochemical conditions of the human upper gastrointestinal (GI) tract, we reported that mucus secretion and physical surface sustained ETEC survival, probably by helping it to face GI stresses. When integrating the host part in Caco2/HT29-MTX co-culture model, we demonstrated that mucus secreting-cells favored ETEC adhesion and virulence gene expression, but did not impede ETEC Interleukin-8 (IL-8) induction. Furthermore, we proved that mucosal surface did not favor ETEC colonization in a complex gut microbial background simulated in batch fecal experiments. However, the mucus-specific microbiota was widely modified upon the ETEC challenge suggesting its role in the pathogen infectious cycle. Using multi-targeted in vitro approaches, this study supports the major role played by mucus in ETEC pathophysiology, opening avenues in the design of new treatment strategies., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
30. Lentils and Yeast Fibers: A New Strategy to Mitigate Enterotoxigenic Escherichia coli (ETEC) Strain H10407 Virulence?
- Author
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Sauvaitre T, Van Herreweghen F, Delbaere K, Durif C, Van Landuyt J, Fadhlaoui K, Huille S, Chaucheyras-Durand F, Etienne-Mesmin L, Blanquet-Diot S, and Van de Wiele T
- Subjects
- Caco-2 Cells, Diarrhea, Dietary Fiber pharmacology, Humans, Plant Extracts, Saccharomyces cerevisiae, Travel, Virulence, Enterotoxigenic Escherichia coli, Escherichia coli Infections prevention & control, Lens Plant
- Abstract
Dietary fibers exhibit well-known beneficial effects on human health, but their anti-infectious properties against enteric pathogens have been poorly investigated. Enterotoxigenic Escherichia coli (ETEC) is a major food-borne pathogen that causes acute traveler's diarrhea. Its virulence traits mainly rely on adhesion to an epithelial surface, mucus degradation, and the secretion of two enterotoxins associated with intestinal inflammation. With the increasing burden of antibiotic resistance worldwide, there is an imperious need to develop novel alternative strategies to control ETEC infections. This study aimed to investigate, using complementary in vitro approaches, the inhibitory potential of two dietary-fiber-containing products (a lentil extract and yeast cell walls) against the human ETEC reference strain H10407. We showed that the lentil extract decreased toxin production in a dose-dependent manner, reduced pro-inflammatory interleukin-8 production, and modulated mucus-related gene induction in ETEC-infected mucus-secreting intestinal cells. We also report that the yeast product reduced ETEC adhesion to mucin and Caco-2/HT29-MTX cells. Both fiber-containing products strengthened intestinal barrier function and modulated toxin-related gene expression. In a complex human gut microbial background, both products did not elicit a significant effect on ETEC colonization. These pioneering data demonstrate the promising role of dietary fibers in controlling different stages of the ETEC infection process.
- Published
- 2022
- Full Text
- View/download PDF
31. Photo-enhanced toxicity of crude oil on early developmental stages of Atlantic cod (Gadus morhua).
- Author
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Aranguren-Abadía L, Yadetie F, Donald CE, Sørhus E, Myklatun LE, Zhang X, Lie KK, Perrichon P, Nakken CL, Durif C, Shema S, Browman HI, Skiftesvik AB, Goksøyr A, Meier S, and Karlsen OA
- Subjects
- Animals, Larva, Ultraviolet Rays, Gadus morhua, Petroleum toxicity, Water Pollutants, Chemical analysis, Water Pollutants, Chemical toxicity
- Abstract
Photo-enhanced toxicity of crude oil is produced by exposure to ultraviolet (UV) radiation. Atlantic cod (Gadus morhua) embryos were exposed to crude oil with and without UV radiation (290-400 nm) from 3 days post fertilization (dpf) until 6 dpf. Embryos from the co-exposure experiment were continually exposed to UV radiation until hatching at 11 dpf. Differences in body burden levels and cyp1a expression in cod embryos were observed between the exposure regimes. High doses of crude oil produced increased mortality in cod co-exposed embryos, as well as craniofacial malformations and heart deformities in larvae from both experiments. A higher number of differentially expressed genes (DEGs) and pathways were revealed in the co-exposure experiment, indicating a photo-enhanced effect of crude oil toxicity. Our results provide mechanistic insights into crude oil and photo-enhanced crude oil toxicity, suggesting that UV radiation increases the toxicity of crude oil in early life stages of Atlantic cod., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
32. Movement patterns of temperate wrasses (Labridae) within a small marine protected area.
- Author
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Halvorsen KT, Larsen T, Browman HI, Durif C, Aasen N, Vøllestad LA, Cresci A, Sørdalen TK, Bjelland RM, and Skiftesvik AB
- Subjects
- Animals, Norway, Perciformes
- Abstract
The movement patterns of three commercially important wrasse (Labridae) species inside a small marine protected area (~ 0.15 km
2 ) on the west coast of Norway were analysed over a period of 21 months. The mean distance between capture and recapture locations varied between 10 and 187 m, and was species and season specific. The extent of movement was not related to body size or sex. These results imply that a network of small strategically located marine protected areas can be used as management tools to protect wrasses from size- and sex-selective fishing mortality., (© 2021 The Authors. Journal of Fish Biology published by John Wiley & Sons Ltd on behalf of Fisheries Society of the British Isles.)- Published
- 2021
- Full Text
- View/download PDF
33. In Vitro Evaluation of Dietary Fiber Anti-Infectious Properties against Food-Borne Enterotoxigenic Escherichia coli .
- Author
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Sauvaitre T, Durif C, Sivignon A, Chalancon S, Van de Wiele T, Etienne-Mesmin L, and Blanquet-Diot S
- Subjects
- Cell Adhesion, Diarrhea prevention & control, Dietary Fiber therapeutic use, Enterotoxigenic Escherichia coli growth & development, Enterotoxigenic Escherichia coli metabolism, Enterotoxigenic Escherichia coli pathogenicity, Enterotoxins metabolism, Escherichia coli Infections prevention & control, Escherichia coli Proteins metabolism, Foodborne Diseases prevention & control, Humans, Intestines cytology, Intestines microbiology, Lens Plant chemistry, Microbial Sensitivity Tests, Mucins, Mucus, Seeds chemistry, Travel, Yeasts chemistry, Diarrhea microbiology, Dietary Fiber pharmacology, Enterotoxigenic Escherichia coli drug effects, Escherichia coli Infections microbiology, Foodborne Diseases microbiology, Virulence Factors
- Abstract
Dietary fibers have well-known beneficial effects on human health, but their anti-infectious properties against human enteric pathogens have been poorly investigated. Enterotoxigenic Escherichia coli (ETEC) is the main agent of travelers' diarrhea, against which targeted preventive strategies are currently lacking. ETEC pathogenesis relies on multiple virulence factors allowing interactions with the intestinal mucosal layer and toxins triggering the onset of diarrheal symptoms. Here, we used complementary in vitro assays to study the antagonistic properties of eight fiber-containing products from cereals, legumes or microbes against the prototypical human ETEC strain H10407. Inhibitory effects of these products on the pathogen were tested through growth, toxin production and mucus/cell adhesion inhibition assays. None of the tested compounds inhibited ETEC strain H10407 growth, while lentil extract was able to decrease heat labile toxin (LT) concentration in culture media. Lentil extract and specific yeast cell walls also interfered with ETEC strain H10407 adhesion to mucin beads and human intestinal cells. These results constitute a first step in the use of dietary fibers as a nutritional strategy to prevent ETEC infection. Further work will be dedicated to the study of fiber/ETEC interactions within a complex gut microbial background.
- Published
- 2021
- Full Text
- View/download PDF
34. Electric and magnetic senses in marine animals, and potential behavioral effects of electromagnetic surveys.
- Author
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Nyqvist D, Durif C, Johnsen MG, De Jong K, Forland TN, and Sivle LD
- Subjects
- Animals, Aquatic Organisms physiology, Electromagnetic Fields adverse effects, Electrophysiological Phenomena, Human Activities
- Abstract
Electromagnetic surveys generate electromagnetic fields to map petroleum deposits under the seabed with unknown consequences for marine animals. The electric and magnetic fields induced by electromagnetic surveys can be detected by many marine animals, and the generated fields may potentially affect the behavior of perceptive animals. Animals using magnetic cues for migration or local orientation, especially during a restricted time-window, risk being affected by electromagnetic surveys. In electrosensitive animals, anthropogenic electric fields could disrupt a range of behaviors. The lack of studies on effects of the electromagnetic fields induced by electromagnetic surveys on the behavior of magneto- and electrosensitive animals is a reason for concern. Here, we review the use of electric and magnetic fields among marine animals, present data on survey generated and natural electromagnetic fields, and discuss potential effects of electromagnetic surveys on the behavior of marine animals., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Published
- 2020
- Full Text
- View/download PDF
35. Molecular-Level Processing of Si-(B)-C Materials with Tailored Nano/Microstructures.
- Author
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Schmidt M, Durif C, Acosta ED, Salameh C, Plaisantin H, Miele P, Backov R, Machado R, Gervais C, Alauzun JG, Chollon G, and Bernard S
- Abstract
The design of Si-(B)-C materials is investigated, with detailed insight into the precursor chemistry and processing, the precursor-to-ceramic transformation, and the ceramic microstructural evolution at high temperatures. In the early stage of the process, the reaction between allylhydridopolycarbosilane (AHPCS) and borane dimethyl sulfide is achieved. This is investigated in detail through solid-state NMR and FTIR spectroscopy and elemental analyses for Si/B ratios ranging from 200 to 30. Boron-based bridges linking AHPCS monomeric fragments act as crosslinking units, extending the processability range of AHPCS and suppressing the distillation of oligomeric fragments during the low-temperature pyrolysis regime. Polymers with low boron contents display appropriate requirements for facile processing in solution, leading to the design of monoliths with hierarchical porosity, significant pore volume, and high specific surface area after pyrolysis. Polymers with high boron contents are more appropriate for the preparation of dense ceramics through direct solid shaping and pyrolysis. We provide a comprehensive study of the thermal decomposition mechanisms, and a subsequent detailed study of the high-temperature behavior of the ceramics produced at 1000 °C. The nanostructure and microstructure of the final SiC-based ceramics are intimately linked to the boron content of the polymers. B
4 C/C/SiC nanocomposites can be obtained from the polymer with the highest boron content., (© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2017
- Full Text
- View/download PDF
36. Timing and pattern of annual silver eel migration in two European watersheds are determined by similar cues.
- Author
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Sandlund OT, Diserud OH, Poole R, Bergesen K, Dillane M, Rogan G, Durif C, Thorstad EB, and Vøllestad LA
- Abstract
Many animals perform long-distance migrations in order to maximize lifetime reproductive success. The European eel migrates several thousand kilometers between their feeding habitats in continental waters (fresh-, brackish, and sea water) and their spawning area in the Sargasso Sea. Eels residing in freshwaters usually initiate their spawning migration as silver eels during autumn, triggered by diverse environmental cues. We analyzed the time series of silver eel downstream migration in Burrishoole, Ireland (1971-2015), and Imsa, Norway (1975-2015), to examine factors regulating the silver eel migration from freshwater to the sea. The migration season (90% of the run) generally lasted from 1 August to 30 November. Environmental factors acting in the months before migration impacted timing and duration of migration, likely through influencing the internal processes preparing the fish for migration. Once the migration had started, environmental factors impacted the day-to-day variation in number of migrants, apparently stimulating migration among those eels ready for migration. Both the day-to-day variation in the number of migrants and the onset of migration were described by nearly identical models in the two rivers. Variables explaining day-to-day variation were all associated with conditions that may minimize predation risk; number of migrants was reduced under a strong moon and short nights and increased during high and increasing water levels. Presence of other migrants stimulated migration, which further indicates that silver eel migration has evolved to minimize predation risk. The onset of migration was explained mainly by water levels in August. The models for duration of the migration season were less similar between the sites. Thus, the overall migration season seems governed by the need to reach the spawning areas in a synchronized manner, while during the actual seaward migration, antipredator behavior seems of overriding importance.
- Published
- 2017
- Full Text
- View/download PDF
37. The dual pattern of corticothalamic projection of the primary auditory cortex in macaque monkey.
- Author
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Rouiller EM and Durif C
- Subjects
- Animals, Auditory Cortex chemistry, Cerebral Cortex chemistry, Macaca mulatta, Neural Pathways chemistry, Neural Pathways physiology, Thalamus chemistry, Auditory Cortex physiology, Cerebral Cortex physiology, Thalamus physiology
- Abstract
The distribution and terminal morphology of the corticothalamic projection originating from the primary auditory cortex (A1) were established in a macaque monkey, using the anterograde (and retrograde) tracer biotinylated dextran amine. A dense corticothalamic projection from A1 was found in the ventral (vMGB) and dorsal (dMGB) divisions of the medial geniculate body and, to a lesser extent, in the medial division (mMGB), the posterior thalamic nucleus (PO) and the suprageniculate nucleus. Most terminal boutons were small (<1 microm), except some large boutons (2-6 microm) located in PO and vMGB. The data demonstrate that the corticothalamic projection from A1 in primate consists of two types of terminals (small and giant endings) in line with previous observations in rat and cat. Retrogradely labeled thalamocortical neurons formed clusters generally overlapping the corticothalamic terminal fields.
- Published
- 2004
- Full Text
- View/download PDF
38. Single-unit responses in the auditory cortex of monkeys performing a conditional acousticomotor task.
- Author
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Durif C, Jouffrais C, and Rouiller EM
- Subjects
- Acoustic Stimulation, Animals, Attention physiology, Behavior, Animal physiology, Cognition physiology, Conditioning, Psychological, Feedback physiology, Motivation, Movement physiology, Nerve Net physiology, Reaction Time physiology, Action Potentials physiology, Auditory Cortex physiology, Auditory Perception physiology, Macaca mulatta physiology, Neurons physiology, Psychomotor Performance physiology
- Abstract
The general goal of the present study was to assess the response properties to tones of single neurons in the auditory cortex (primary auditory area, A1, and middle lateral auditory belt, ML) of two macaque monkeys while performing an acousticomotor discrimination task requiring a controlled level of attention and motivation. For each neuron, an approximation of the frequency receptive field (FRF) was first established. Second, based on the FRF, sets of paired tone frequencies were defined in which two different tone frequencies had to be associated by the monkey, following a trial and error strategy, to a left or a right key-press with the left arm. After acquisition of the association, the two tones of the pair were presented randomly ("instruction stimulus") and, if the monkey touched the correct key, the stimulus was repeated ("confirmation stimulus") and a reward was delivered. The majority of units (63%) had a FRF formed by multiple peaks, whereas 25% and 12% of units exhibited a simple U-shaped FRF and a "mosaic" FRF, composed of several separated zones of response, respectively. Five principal response patterns were observed: On, Off, On-Off, Sustained, and Inhibition. In relation to the acousticomotor association task, some auditory cortical neurons (33%) exhibited a different response to the same stimulus when presented, in the same trials, as instruction or as confirmation. It was also observed that the response to the same instruction stimulus could differ when comparing correct trials with erroneous trials (wrong motor response). In conclusion, the response properties of auditory cortical neurons in behaving monkeys are strongly dependent on the physical parameters of sounds (frequency, intensity, etc.) as indicated by FRF characteristics, but a substantial influence of the behavioral context and performance may also play an important role.
- Published
- 2003
- Full Text
- View/download PDF
39. [Comparative study of the behavior of HPLC stationary phases for the analysis of pilocarpine and its impurities and degradation products].
- Author
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Durif C, Ribes M, Kister G, and Puech A
- Subjects
- Chromatography, High Pressure Liquid, Pilocarpine analysis
- Published
- 1988
40. [Validation of an HPLC technic for analysis of pilocarpine and its impurities and degradation products].
- Author
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Durif C, Ribes M, Kister G, and Puech A
- Subjects
- Chemical Phenomena, Chemistry, Physical, Chromatography, High Pressure Liquid, Pilocarpine analysis
- Published
- 1988
41. [Rapid semiquantitative evaluation by thin-layer chromatography of pilo- and isopilocarpic acids in eyedrops with a pilocarpine base].
- Author
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Durif C, Ribes M, Kister G, and Puech A
- Subjects
- Chromatography, Thin Layer, Ophthalmic Solutions, Pilocarpine analogs & derivatives, Pilocarpine analysis
- Published
- 1986
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