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Recent advances in supercontinuum light generation have been remarkable, particularly in the context of highly nonlinear photonic integrated waveguides. In this study, we thoroughly investigate supercontinuum (SC) generation in high-index doped silica glass integrated waveguides, exploring various femtosecond pumping wavelengths and input polarization states. We demonstrate broadband SC generation spanning from 700 nm to 2400 nm when pumping within the anomalous dispersion regime at 1200 nm, 1300 nm, and 1550 nm. In contrast, pumping within the normal dispersion regime at 1000 nm results in narrower SC spectra, primarily due to coherent nonlinear effects such as self-phase modulation and optical wave breaking. Additionally, we examine the impact of TE/TM polarization modes on SC generation, shedding light on the polarization-dependent characteristics of the broadening process. Moreover, Raman scattering measurements reveal the emergence of two new peaks at 48.8 THz and 75.1 THz in the Raman gain curve. Our experimental results are supported by numerical simulations based on a generalized nonlinear Schrodinger equation that incorporates the new Raman gain contribution. Finally, relative intensity noise measurements conducted using the dispersive Fourier transform technique indicate excellent stability of the generated SC spectra., Comment: 21 pages, 13 figures

Diffusion tensor based cardiovascular magnetic resonance (DT-CMR) offers a non-invasive method to visualize the myocardial microstructure. With the assumption that the heart is stationary, frames are acquired with multiple repetitions for different diffusion encoding directions. However, motion from poor breath-holding and imprecise cardiac triggering complicates DT-CMR analysis, further challenged by its inherently low SNR, varied contrasts, and diffusion induced textures. Our solution is a novel framework employing groupwise registration with an implicit template to isolate respiratory and cardiac motions, while a tensor-embedded branch preserves diffusion contrast textures. We have devised a loss refinement tailored for non-linear least squares fitting and low SNR conditions. Additionally, we introduce new physics-based and clinical metrics for performance evaluation. Access code and supplementary materials at: https://github.com/ayanglab/DTCMR-Reg, Comment: Accepted by MICCAI 2024

Motivation: Post-processing of in-vivo diffusion tensor CMR (DT-CMR) is challenging due to the low SNR and variation in contrast between frames which makes image registration difficult, and the need to manually reject frames corrupted by motion. Goals: To develop a semi-automatic post-processing pipeline for robust DT-CMR registration and automatic frame selection. Approach: We used low intrinsic rank averaged frames as the reference to register other low-ranked frames. A myocardium-guided frame selection rejected the frames with signal loss, through-plane motion and poor registration. Results: The proposed method outperformed our previous noise-robust rigid registration on helix angle data quality and reduced negative eigenvalues in healthy volunteers., Comment: Accepted as ISMRM 2024 Digital poster 2141

The conservation of spectral asymmetry is a fundamental feature of the ideal four-wave mixing process as it exists in a medium combining quadratic chromatic dispersion and third-order nonlinearity. We test in this paper the robustness of this invariant in an experimental configuration where the excitation conditions of an optical fiber are sequentially updated, mimicking infinite propagation. This theoretical and experimental study reveals the high sensitivity of the asymmetry to very slight deviations from the ideal case, and we show that our idealized system behaves as an intermediate case between the ideal case of non-cascaded fourwave mixing and propagation in a system governed by the nonlinear Schr{\"o}dinger equation.

Diffusion tensor cardiac magnetic resonance (DT-CMR) is a method capable of providing non-invasive measurements of myocardial microstructure. Image registration is essential to correct image shifts due to intra and inter breath-hold motion and imperfect cardiac triggering. Registration is challenging in DT-CMR due to the low signal-to-noise and various contrasts induced by the diffusion encoding in the myocardium and surrounding organs. Traditional deformable registration corrects through-plane motion but at the risk of destroying the texture information while rigid registration inefficiently discards frames with local deformation. In this study, we explored the possibility of deep learning-based deformable registration on DT-CMR. Based on the noise suppression using low-rank features and diffusion encoding suppression using variational auto encoder-decoder, a B-spline based registration network extracted the displacement fields and maintained the texture features of DT-CMR. In this way, our method improved the efficiency of frame utilization, manual cropping, and computational speed., Comment: 7 pages, 4 figures, conference

In vivo cardiac diffusion tensor imaging (cDTI) is a promising Magnetic Resonance Imaging (MRI) technique for evaluating the micro-structure of myocardial tissue in the living heart, providing insights into cardiac function and enabling the development of innovative therapeutic strategies. However, the integration of cDTI into routine clinical practice is challenging due to the technical obstacles involved in the acquisition, such as low signal-to-noise ratio and long scanning times. In this paper, we investigate and implement three different types of deep learning-based MRI reconstruction models for cDTI reconstruction. We evaluate the performance of these models based on reconstruction quality assessment and diffusion tensor parameter assessment. Our results indicate that the models we discussed in this study can be applied for clinical use at an acceleration factor (AF) of $\times 2$ and $\times 4$, with the D5C5 model showing superior fidelity for reconstruction and the SwinMR model providing higher perceptual scores. There is no statistical difference with the reference for all diffusion tensor parameters at AF $\times 2$ or most DT parameters at AF $\times 4$, and the quality of most diffusion tensor parameter maps are visually acceptable. SwinMR is recommended as the optimal approach for reconstruction at AF $\times 2$ and AF $\times 4$. However, we believed the models discussed in this studies are not prepared for clinical use at a higher AF. At AF $\times 8$, the performance of all models discussed remains limited, with only half of the diffusion tensor parameters being recovered to a level with no statistical difference from the reference. Some diffusion tensor parameter maps even provide wrong and misleading information., Comment: 15 pages, 8 figures

We deploy a supervised machine-learning model based on a neural network to predict the temporal and spectral reshaping of a simple sinusoidal modulation into a pulse train having a comb structure in the frequency domain, which occurs upon nonlinear propagation in an optical fibre. Both normal and anomalous second-order dispersion regimes of the fibre are studied, and the speed of the neural network is leveraged to probe the space of input parameters for the generation of custom combs or the occurrence of significant temporal or spectral focusing.

The four-wave mixing process is a fundamental nonlinear interaction in Kerr media that can be described by a closed trajectory in the associated phase plane. We show here that it is possible to manipulate these trajectories and to connect two points that are not part of the same orbit. Our approach is based on a localized abrupt modification of the average power of the system. This mechanism is confirmed using different experimental realizations where iterative propagation in a short fiber segments mimics propagation in an idealized optical fiber.

Near-ideal four wave mixing dynamics are observed in a nonlinear Schr{\"o}dinger equation system using a new experimental technique associated with iterated sequential initial conditions in optical fiber. This novel approach mitigates against unwanted sideband generation and optical loss, extending the effective propagation distance by two orders of magnitude, allowing Kerr-driven coupling dynamics to be seen over 50 km of optical fiber using only one short fiber segment of 500 m. Our experiments reveal the full dynamical phase space topology in amplitude and phase, showing characteristic features of multiple Fermi-Pasta-Ulam recurrence cycles, stationary wave existence, and the system separatrix boundary. Experiments are shown to be in excellent quantitative agreement with numerical solutions of the canonical differential equation system describing the wave evolution.

The physics and applications of fiber-based supercontinuum (SC) sources have been a subject of intense interest over the last decade, with significant impact on both basic science and industry. New uses for SC sources are also constantly emerging due to their unique properties that combine high brightness, multi-octave frequency bandwidth, fiber delivery, and single-mode output. The last few years have seen significant research efforts focused on extending the wavelength coverage of SC sources towards the 2 to 20 $\mu$m molecular fingerprint mid-infrared (MIR) region and in the ultraviolet (UV) down to 100 nm, while also improving stability, noise and coherence, output power, and polarization properties. Here we review a selection of recent advances in SC generation in a range of specialty optical fibers, including fluoride, chalcogenide, telluride, and silicon-core fibers for the MIR; UV-grade silica fibers and gas-filled hollow-core fibers for the UV range; and all-normal dispersion fibers for ultralow-noise coherent SC generation., Comment: Copyright 2021 Optica Publishing Group. One print or electronic copy may be made for personal use only. Systematic reproduction and distribution, duplication of any material in this paper for a fee or for commercial purposes, or modifications of the content of this paper are prohibited

We review the study of rogue waves and related instabilities in optical and oceanic environments, with particular focus on recent experimental developments. In optics, we emphasize results arising from the use of real-time measurement techniques, whilst in oceanography we consider insights obtained from analysis of real-world ocean wave data and controlled experiments in wave tanks. Although significant progress in understanding rogue waves has been made based on an analogy between wave dynamics in optics and hydrodynamics, these comparisons have predominantly focused on one-dimensional nonlinear propagation scenarios. As a result, there remains significant debate about the dominant physical mechanisms driving the generation of ocean rogue waves in the complex environment of the open sea. Here, we review state-of-the-art of rogue wave studies in optics and hydrodynamics, aiming to clearly identify similarities and differences between the results obtained in the two fields. In hydrodynamics, we take care to review results that support both nonlinear and linear interpretations of ocean rogue wave formation, and in optics, we also summarise results from an emerging area of research applying the measurement techniques developed for the study of rogue waves to dissipative soliton systems. We conclude with a discussion of important future research directions.

In this paper, we report the design and fabrication of a highly birefringent polarization-maintaining photonic crystal fiber (PM-PCF) made from chalcogenide glass, and its application to linearly-polarized supercontinuum (SC) generation in the mid-infrared region. The PM fiber was drawn using the casting method from As38Se62 glass which features a transmission window from 2 to 10 $\mu m$ and a high nonlinear index of 1.13.10$^{-17}$m$^{2}$W$^{-1}$. It has a zero-dispersion wavelength around 4.5 $\mu m$ and, at this wavelength, a large birefringence of 6.10$^{-4}$ and consequently strong polarization maintaining properties are expected. Using this fiber, we experimentally demonstrate supercontinuum generation spanning from 3.1-6.02 $\mu m$ and 3.33-5.78 $\mu m$ using femtosecond pumping at 4 $\mu m$ and 4.53 $\mu m$, respectively. We further investigate the supercontinuum bandwidth versus the input pump polarization angle and we show very good agreement with numerical simulations of the two-polarization model based on two coupled generalized nonlinear Schr\"odinger equations., Comment: 13 pages, 8 figures

We investigate supercontinuum generation in several suspended-core soft-glass photonic crystal fibers pumped by an optical parametric oscillator tunable around 1550 nm. The fibers were drawn from lead-bismuth-gallium-cadmium-oxide glass (PBG-81) with a wide transmission window from 0.5-2.7 micron and a high nonlinear refractive index up to 4.3.10^(-19) m^2/W. They have been specifically designed with a microscale suspended hexagonal core for efficient supercontinuum generation around 1550 nm. We experimentally demonstrate two supercontinuum spectra spanning from 1.07-2.31 micron and 0.89-2.46 micron by pumping two PCFs in both normal and anomalous dispersion regimes, respectively. We also numerically model the group velocity dispersion curves for these fibers from their scanning electron microscope images. Results are in good agreement with numerical simulations based on the generalized nonlinear Schrodinger equation including the pump frequency chirp.

The evolution of crossing sea states and the emergence of rogue waves in such systems are studied via numerical simulations performed using a higher order spectral method to solve the free surface Euler equations with a flat bottom. Two classes of crossing sea states are analysed: one using directional spectra from the Draupner wave crossing at different angles, another considering a Draupner-like spectra crossed with a narrowband JONSWAP state to model spectral growth between wind sea and swell. These two classes of crossing sea states are constructed using the spectral output of a WAVEWATCH III hindcast on the Draupner rogue wave event. We measure ensemble statistical moments as functions of time, finding that although the crossing angle influences the statistical evolution to some degree, there are no significant third order effects present. Additionally, we pay particular attention to the mean sea level measured beneath extreme crest heights, the elevation of which (set up or set down) is shown to be related to the spectral content in the low wavenumber region of the corresponding spectrum.

Ultrafast lasers have revolutionized material processing, opening a wealth of new applications in many areas of science. A recent technology that allows the cleaving of transparent materials via non-ablative processes is based on focusing and translating a high-intensity laser beam within a material to induce a well-defined internal stress plane. This then enables material separation without debris generation. Here, we use a non-diffracting beam engineered to have a transverse elliptical spatial profile to generate high aspect ratio elliptical channels in glass of dimension 350 nm x 710 nm, and subsequent cleaved surface uniformity at the sub-micron level., Comment: 5 pages, 4 figures

Dissipative solitons are remarkable localized states of a physical system that arise from the dynamical balance between nonlinearity, dispersion and environmental energy exchange. They are the most universal form of soliton that can exist in nature, and are seen in far-from-equilibrium systems in many fields including chemistry, biology, and physics. There has been particular interest in studying their properties in mode-locked lasers producing ultrashort light pulses, but experiments have been limited by the lack of convenient measurement techniques able to track the soliton evolution in real-time. Here, we use dispersive Fourier transform and time lens measurements to simultaneously measure real-time spectral and temporal evolution of dissipative solitons in a fiber laser as the turn-on dynamics pass through a transient unstable regime with complex break-up and collision dynamics before stabilizing to a regular mode-locked pulse train. Our measurements enable reconstruction of the soliton amplitude and phase and calculation of the corresponding complex-valued eigenvalue spectrum to provide further physical insight. These findings are significant in showing how real-time measurements can provide new perspectives into the ultrafast transient dynamics of complex systems., Comment: See also M. Narhi, P. Ryczkowski, C. Billet, G. Genty, J. M. Dudley, Ultrafast Simultaneous Real Time Spectral and Temporal Measurements of Fibre Laser Modelocking Dynamics, 2017 Conference on Lasers and Electro-Optics Europe & European Quantum Electronics Conference, paper EE-3.5 (2017)

We present experimental evidence of the universal emergence of the Peregrine soliton predicted in the semi-classical (zero-dispersion) limit of the focusing nonlinear Schr\"{o}dinger equation [Comm. Pure Appl. Math. {\bf 66}, 678 (2012)]. Experiments studying higher-order soliton propagation in optical fiber use an optical sampling oscilloscope and frequency-resolved optical gating to characterise intensity and phase around the first point of soliton compression and the results show that the properties of the compressed pulse and background pedestal can be interpreted in terms of the Peregrine soliton. Experimental and numerical results reveal that the universal mechanism under study is highly robust and can be observed over a broad range of parameters, and experiments are in very good agreement with numerical simulations.