3,193 results on '"DuBois, A. M."'
Search Results
2. Atomic scale imaging of the negative charge induced by a single vanadium dopant atom in monolayer WSe$_2$ using 4D-STEM
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Dosenovic, D., Sharma, K., Dechamps, S., Rouviere, J. -L., Lu, Y., Mordant, A., Hertog, M. den, Genovese, L., Dubois, S. M. -M., Charlier, J. -C., Jamet, M., Marty, A., and Okuno, H.
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Condensed Matter - Materials Science - Abstract
There has been extensive activity exploring the doping of semiconducting two-dimensional (2D) transition metal dichalcogenides in order to tune their electronic and magnetic properties. The outcome of doping depends on various factors, including the intrinsic properties of the host material, the nature of the dopants used, their spatial distribution as well as their interactions with other types of defects. A thorough atomic-level analysis is essential to fully understand these mechanisms. In this work, vanadium doped WSe$_2$ monolayer grown by molecular beam epitaxy is investigated using four-dimensional scanning transmission electron microscopy (4D-STEM). Through center of mass-based reconstruction, atomic scale maps are produced, allowing the visualization of both the electric field and the electrostatic potential around individual V atoms. To provide quantitative insights, these results are successfully compared with multislice image simulations based on ab initio calculations, accounting for lens aberrations. Finally, a negative charge around the V dopants is detected as a drop in the electrostatic potential, unambiguously demonstrating that 4D-STEM can be used to detect and to accurately analyze single dopant charge states in semiconducting 2D materials., Comment: 17 pages, 4 figures and Supporting Information
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- 2023
3. Under-reporting of tuberculosis disease among children and adolescents in low and middle-income countries: A systematic review
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Linn, Alexandra R, Dubois, Melanie M, and Steenhoff, Andrew P
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- 2023
4. Structure and Antigenicity of the Porcine Astrovirus 4 Capsid Spike
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Haley, Danielle J, Lanning, Sarah, Henricson, Kyle E, Mardirossian, Andre A, Cirillo, Iyan, Rahe, Michael C, and DuBois, Rebecca M
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Microbiology ,Biological Sciences ,Immunization ,Biotechnology ,Vaccine Related ,Infectious Diseases ,Infection ,Good Health and Well Being ,Animals ,Swine ,Capsid Proteins ,Swine Diseases ,Antibodies ,Viral ,Astroviridae Infections ,Antigens ,Viral ,Capsid ,Recombinant Proteins ,Epitopes ,Models ,Molecular ,Viral Vaccines ,Protein Conformation ,Mamastrovirus ,astroviruses ,virus structure ,spike ,porcine astrovirus ,capsid - Abstract
Porcine astrovirus 4 (PoAstV4) has been recently associated with respiratory disease in pigs. In order to understand the scope of PoAstV4 infections and to support the development of a vaccine to combat PoAstV4 disease in pigs, we designed and produced a recombinant PoAstV4 capsid spike protein for use as an antigen in serological assays and for potential future use as a vaccine antigen. Structural prediction of the full-length PoAstV4 capsid protein guided the design of the recombinant PoAstV4 capsid spike domain expression plasmid. The recombinant PoAstV4 capsid spike was expressed in Escherichia coli, purified by affinity and size-exclusion chromatography, and its crystal structure was determined at 1.85 Å resolution, enabling structural comparisons to other animal and human astrovirus capsid spike structures. The recombinant PoAstV4 capsid spike protein was also used as an antigen for the successful development of a serological assay to detect PoAstV4 antibodies, demonstrating that the recombinant PoAstV4 capsid spike retains antigenic epitopes found on the native PoAstV4 capsid. These studies lay a foundation for seroprevalence studies and the development of a PoAstV4 vaccine for swine.
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- 2024
5. Immune response to SARS-CoV-2 variants after immunization with different vaccines in Mexico
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Garay, Erika, Whelan, Sean PJ, DuBois, Rebecca M, O’Rourke, Sara M, Salgado-Escobar, Angel Eduardo, Muñoz-Medina, José Esteban, Arias, Carlos F, and López, Susana
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunization ,Prevention ,Biotechnology ,Infectious Diseases ,Vaccine Related ,Emerging Infectious Diseases ,Biodefense ,Coronaviruses Vaccines ,Coronaviruses ,Clinical Research ,3.4 Vaccines ,Prevention of disease and conditions ,and promotion of well-being ,Infection ,Good Health and Well Being ,Adult ,Middle Aged ,Humans ,SARS-CoV-2 ,Mexico ,BNT162 Vaccine ,Seroepidemiologic Studies ,COVID-19 ,Vaccination ,Vaccines ,Immunity ,Antibodies ,Viral ,Antibodies ,Neutralizing ,Spike Glycoprotein ,Coronavirus ,COVID-19 vaccines ,hybrid immunity ,SARS-CoV-2 variants ,seroconversion ,Public Health and Health Services ,Epidemiology ,Veterinary sciences ,Clinical sciences - Abstract
There is limited information on the antibody responses against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in subjects from developing countries with populations having a high incidence of co-morbidities. Here, we analysed the immunogenicity of homologous schemes using the ChAdOx1-S, Sputnik V, or BNT162b2 vaccines and the effect of a booster dose with ChAdOx1-S in middle-aged adults who were seropositive or seronegative to the SARS-CoV-2 spike protein before vaccination. The study was conducted post-vaccination with a follow-up of 4 months for antibody titre using enzyme-linked immunosorbent assay (ELISA) and pseudovirus (PV) neutralization assays (PNAs). All three vaccines elicited a superior IgG anti-receptor-binding domain (RBD) and neutralization response against the Alpha and Delta variants when administered to individuals with a previous infection by SARS-CoV-2. The booster dose spiked the neutralization activity among individuals with and without a prior SARS-CoV-2 infection. The ChAdOx1-S vaccine induced weaker antibody responses in infection-naive subjects. A follow-up of 4 months post-vaccination showed a drop in antibody titre, with about 20% of the infection-naive and 100% of SARS-CoV-2 pre-exposed participants with detectable neutralization capacity against Alpha pseudovirus (Alpha-PV) and Delta PV (Delta-PV). Our observations support the use of different vaccines in a country with high seroprevalence at the vaccination time.
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- 2024
6. Structure and antigenicity of the divergent human astrovirus VA1 capsid spike
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Ghosh, Anisa, Delgado-Cunningham, Kevin, López, Tomás, Green, Kassidy, Arias, Carlos F, and DuBois, Rebecca M
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Medical Microbiology ,Biomedical and Clinical Sciences ,Biological Sciences ,Foodborne Illness ,Vaccine Related ,Digestive Diseases ,Aetiology ,2.2 Factors relating to the physical environment ,2.1 Biological and endogenous factors ,Infection ,Child ,Humans ,Capsid ,Mamastrovirus ,Capsid Proteins ,Mutation ,Astroviridae Infections ,Phylogeny ,Feces ,Microbiology ,Immunology ,Virology ,Medical microbiology - Abstract
Human astrovirus (HAstV) is a known cause of viral gastroenteritis in children worldwide, but HAstV can cause also severe and systemic infections in immunocompromised patients. There are three clades of HAstV: classical, MLB, and VA/HMO. While all three clades are found in gastrointestinal samples, HAstV-VA/HMO is the main clade associated with meningitis and encephalitis in immunocompromised patients. To understand how the HAstV-VA/HMO can infect the central nervous system, we investigated its sequence-divergent capsid spike, which functions in cell attachment and may influence viral tropism. Here we report the high-resolution crystal structures of the HAstV-VA1 capsid spike from strains isolated from patients with gastrointestinal and neuronal disease. The HAstV-VA1 spike forms a dimer and shares a core beta-barrel structure with other astrovirus capsid spikes but is otherwise strikingly different, suggesting that HAstV-VA1 may utilize a different cell receptor, and an infection competition assay supports this hypothesis. Furthermore, by mapping the capsid protease cleavage site onto the structure, the maturation and assembly of the HAstV-VA1 capsid is revealed. Finally, comparison of gastrointestinal and neuronal HAstV-VA1 sequences, structures, and antigenicity suggests that neuronal HAstV-VA1 strains may have acquired immune escape mutations. Overall, our studies on the HAstV-VA1 capsid spike lay a foundation to further investigate the biology of HAstV-VA/HMO and to develop vaccines and therapeutics targeting it.
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- 2024
7. Structural basis for the activity and specificity of the immune checkpoint inhibitor lirilumab
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Lorig-Roach, Nicholas, Harpell, Nina M, and DuBois, Rebecca M
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Cancer ,Development of treatments and therapeutic interventions ,Underpinning research ,5.1 Pharmaceuticals ,1.1 Normal biological development and functioning ,Inflammatory and immune system ,Humans ,Immune Checkpoint Inhibitors ,Amino Acids ,Antibodies ,Monoclonal ,Epitopes - Abstract
The clinical success of immune checkpoint inhibitors has underscored the key role of the immune system in controlling cancer. Current FDA-approved immune checkpoint inhibitors target the regulatory receptor pathways of cytotoxic T-cells to enhance their anticancer responses. Despite an abundance of evidence that natural killer (NK) cells can also mediate potent anticancer activities, there are no FDA-approved inhibitors targeting NK cell specific checkpoint pathways. Lirilumab, the most clinically advanced NK cell checkpoint inhibitor, targets inhibitory killer immunoglobulin-like receptors (KIRs), however it has yet to conclusively demonstrate clinical efficacy. Here we describe the crystal structure of lirilumab in complex with the inhibitory KIR2DL3, revealing the precise epitope of lirilumab and the molecular mechanisms underlying KIR checkpoint blockade. Notably, the epitope includes several key amino acids that vary across the human population, and binding studies demonstrate the importance of these amino acids for lirilumab binding. These studies reveal how KIR variations in patients could influence the clinical efficacy of lirilumab and reveal general concepts for the development of immune checkpoint inhibitors targeting NK cells.
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- 2024
8. Structure and immunogenicity of the murine astrovirus capsid spike.
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Lanning, Sarah, Pedicino, Natalie, Haley, Danielle J, Hernandez, Samuel, Cortez, Valerie, and DuBois, Rebecca M
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunization ,Vaccine Related ,Prevention ,Biotechnology ,Infectious Diseases ,Prevention of disease and conditions ,and promotion of well-being ,3.4 Vaccines ,Infection ,Good Health and Well Being ,Child ,Humans ,Animals ,Mice ,Child ,Preschool ,Capsid ,Capsid Proteins ,Astroviridae ,Astroviridae Infections ,Vaccines ,astroviruses ,virus structure ,spike protein ,murine astrovirus ,viral capsid. ,viral capsid ,Biological Sciences ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Virology ,Agricultural ,veterinary and food sciences ,Biological sciences ,Biomedical and clinical sciences - Abstract
Human astroviruses (HAstVs) are small, non-enveloped icosahedral RNA viruses that are a significant cause of diarrhoea in young children. Despite their worldwide prevalence, HAstV pathogenesis studies and vaccine development remain challenging due to the lack of an animal model for HAstV infection. The recent development of a murine astrovirus (MuAstV) infection model in mice provides the opportunity to test proof-of-concept vaccines based on MuAstV antigens. To help establish a system in which an astrovirus capsid spike-based vaccine could be tested in vivo, we designed and produced a recombinant MuAstV capsid spike protein based on predicted secondary structure homology to HAstV spike proteins. The recombinant MuAstV spike can be expressed with high efficiency in Escherichia coli and retains antigenicity to polyclonal antibodies elicited by MuAstV infection. We determined the crystal structure of the MuAstV spike to 1.75 Å and assessed its structural conservation with HAstV capsid spike. Despite low sequence identity between the MuAstV and HAstV spikes and differences in their overall shapes, they share related structural folds. Additionally, we found that vaccination with MuAstV spike induced anti-MuAstV-spike antibodies, highlighting that the recombinant spike is immunogenic. These studies lay a foundation for future in vivo MuAstV challenge studies to test whether MuAstV spike can be the basis of an effective vaccine.
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- 2023
9. Current Issues in Behavioral and Social Science Research Ethics
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DuBois, James M., Lisi, Emily C., Iltis, Ana S., book editor, and MacKay, Douglas, book editor
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- 2024
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10. De novo protein sequencing of antibodies for identification of neutralizing antibodies in human plasma post SARS-CoV-2 vaccination
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Le Bihan, Thierry, Nunez de Villavicencio Diaz, Teresa, Reitzel, Chelsea, Lange, Victoria, Park, Minyoung, Beadle, Emma, Wu, Lin, Jovic, Marko, Dubois, Rosalin M., Couzens, Amber L., Duan, Jin, Han, Xiaobing, Liu, Qixin, and Ma, Bin
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- 2024
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11. A training protocol compliance of 13% was observed in a research study of clinical research professionals
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Solomon, Erin D., Mozersky, Jessica, Parsons, Meredith V., Baldwin, Kari, Goodman, Melody, and DuBois, James M.
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- 2024
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12. Infectious Morbidity and All-cause Mortality of Infants HIV-exposed Uninfected Compared to Infants HIV-unexposed Uninfected in Botswana
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Dubois, Melanie M., Jao, Jennifer, Sun, Shan, Legbedze, Justine, Schenkel, Sara, Mmasa, Nicholas, Kgole, Samuel W., Masasa, Gosego, Happel, Anna-Ursula, Iwase, Saori C., Haghighat, Roxanna, Moyo, Sikhulile, Sharma, Tanvi S., Edlefsen, Paul T., Shao, Danica, Jaspan, Heather, and Powis, Kathleen M.
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- 2024
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13. Indoleamine 2,3-dioxygenase 1 regulates cell permissivity to astrovirus infection
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Cortez, Valerie, Livingston, Brandi, Sharp, Bridgett, Hargest, Virginia, Papizan, James B, Pedicino, Natalie, Lanning, Sarah, Jordan, Summer Vaughn, Gulman, Jacob, Vogel, Peter, DuBois, Rebecca M, Crawford, Jeremy Chase, Boyd, David F, Pruett-Miller, Shondra M, Thomas, Paul G, and Schultz-Cherry, Stacey
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunology ,Infectious Diseases ,Digestive Diseases ,2.1 Biological and endogenous factors ,Aetiology ,Infection ,Animals ,Humans ,Mice ,Astroviridae Infections ,Caco-2 Cells ,Indoleamine-Pyrrole 2 ,3 ,-Dioxygenase ,Interferons ,Tryptophan ,Biological Sciences ,Medical and Health Sciences - Abstract
Astroviruses cause a spectrum of diseases spanning asymptomatic infections to severe diarrhea, but little is understood about their pathogenesis. We previously determined that small intestinal goblet cells were the main cell type infected by murine astrovirus-1. Here, we focused on the host immune response to infection and inadvertently discovered a role for indoleamine 2,3-dioxygenase 1 (Ido1), a host tryptophan catabolizing enzyme, in the cellular tropism of murine and human astroviruses. We identified that Ido1 expression was highly enriched among infected goblet cells, and spatially corresponded to the zonation of infection. Because Ido1 can act as a negative regulator of inflammation, we hypothesized it could dampen host antiviral responses. Despite robust interferon signaling in goblet cells, as well as tuft cell and enterocyte bystanders, we observed delayed cytokine induction and suppressed levels of fecal lipocalin-2. Although we found Ido-/- animals were more resistant to infection, this was not associated with fewer goblet cells nor could it be rescued by knocking out interferon responses, suggesting that IDO1 instead regulates cell permissivity. We characterized IDO1-/- Caco-2 cells and observed significantly reduced human astrovirus-1 infection. Together this study highlights a role for Ido1 in astrovirus infection and epithelial cell maturation.
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- 2023
14. Editors' Note
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DuBois, James M., Iltis, Ana S., and Walsh, Heidi A.
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- 2024
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15. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential
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Slavish, Peter J, Cuypers, Maxime G, Rimmer, Mary Ashley, Abdolvahabi, Alireza, Jeevan, Trushar, Kumar, Gyanendra, Jarusiewicz, Jamie A, Vaithiyalingam, Sivaraja, Jones, Jeremy C, Bowling, John J, Price, Jeanine E, DuBois, Rebecca M, Min, Jaeki, Webby, Richard J, Rankovic, Zoran, and White, Stephen W
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Medical Microbiology ,Biomedical and Clinical Sciences ,Infectious Diseases ,Prevention ,Influenza ,Antimicrobial Resistance ,Biodefense ,HIV/AIDS ,Genetics ,Emerging Infectious Diseases ,Vaccine Related ,Pneumonia & Influenza ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Infection ,Humans ,HIV Integrase Inhibitors ,RNA-Dependent RNA Polymerase ,Orthomyxoviridae ,Pyridones ,Influenza ,Human ,Dibenzothiepins ,Endonucleases ,Triazines ,Antiviral Agents ,PAN endonuclease ,Raltegravir ,Drug discovery ,Drug resistance ,X-ray crystallography ,Mass spectrometry ,PA(N) endonuclease ,Medicinal and Biomolecular Chemistry ,Organic Chemistry ,Pharmacology and Pharmaceutical Sciences ,Medicinal & Biomolecular Chemistry ,Pharmacology and pharmaceutical sciences ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Influenza is one of the leading causes of disease-related mortalities worldwide. Several strategies have been implemented during the past decades to hinder the replication cycle of influenza viruses, all of which have resulted in the emergence of resistant virus strains. The most recent example is baloxavir marboxil, where a single mutation in the active site of the target endonuclease domain of the RNA-dependent-RNA polymerase renders the recent FDA approved compound ∼1000-fold less effective. Raltegravir is a first-in-class HIV inhibitor that shows modest activity to the endonuclease. Here, we have used structure-guided approaches to create rationally designed derivative molecules that efficiently engage the endonuclease active site. The design strategy was driven by our previously published structures of endonuclease-substrate complexes, which allowed us to target functionally conserved residues and reduce the likelihood of resistance mutations. We succeeded in developing low nanomolar equipotent inhibitors of both wild-type and baloxavir-resistant endonuclease. We also developed macrocyclic versions of these inhibitors that engage the active site in the same manner as their 'open' counterparts but with reduced affinity. Structural analyses provide clear avenues for how to increase the affinity of these cyclic compounds.
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- 2023
16. Immunogenicity and protective efficacy of an RSV G S177Q central conserved domain nanoparticle vaccine
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Bergeron, Harrison C, Murray, Jackelyn, Juarez, Maria G, Nangle, Samuel J, DuBois, Rebecca M, and Tripp, Ralph A
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Vaccine Related ,Nanotechnology ,Prevention ,Pediatric ,Pneumonia ,Lung ,Biotechnology ,Bioengineering ,Immunization ,Infectious Diseases ,Prevention of disease and conditions ,and promotion of well-being ,3.4 Vaccines ,Infection ,Good Health and Well Being ,Mice ,Animals ,Respiratory Syncytial Virus Infections ,Respiratory Syncytial Virus Vaccines ,Antibodies ,Viral ,Respiratory Syncytial Virus ,Human ,Antibodies ,Neutralizing ,GTP-Binding Proteins ,RSV ,G protein ,structure-guided vaccine ,nanoparticle vaccine ,neutralizing Abs ,Immunology ,Medical Microbiology - Abstract
IntroductionRespiratory syncytial virus (RSV) can cause lower respiratory tract disease in infants and elderly populations. Despite decades of research, there remains no safe and approved RSV vaccine. Previously, we showed that an RSV G glycoprotein subunit vaccine candidate with a single point mutation within the central conserved domain (CCD), i.e. S177Q, considerably improved immunogenicity.MethodsHere, we examine the development of nanoparticle (NP) vaccines having either an RSV G protein CCD with wild-type sequence (NPWT) or an S177Q mutation (NP-S177Q). The NP vaccine immunogens were adjuvanted with monophosphoryl lipid A (MPLA), a TLR4 agonist to improve Th1- type responses. BALB/c mice were primed with 10 μg of NP-WT vaccine, NPS177Q, or vehicle, rested, and then boosted with a high (25 μg) or low (10 μg) dose of the NP-WT or NP-S177Q homologous candidate and subsequently challenged with RSV A2.ResultsThe results showed that mice boosted with NP-S177Q developed superior immunogenicity and neutralizing antibodies compared to NP-WT boosting. IgG from either NP-S177Q or NP-WT vaccinated mice did not interfere with fractalkine (CX3CL1) binding to CX3CR1 and effectively blocked G protein CX3C-CX3CR1 binding. Both NP-WT and NP-S177Q vaccination induced similar neutralizing antibodies to RSV in challenged mice compared to vehicle control. NP-S177Q boosting improved correlates of protection including reduced BAL cell infiltration following RSV challenge. However, the NP vaccine platform will require improvement due to the poor solubility and the unexpectedly weaker Th1-type IgG2a response.DiscussionThe results from this study support further NP-S177Q vaccine candidate development.
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- 2023
17. Structural insights into the broad protection against H1 influenza viruses by a computationally optimized hemagglutinin vaccine
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Dzimianski, John V, Han, Julianna, Sautto, Giuseppe A, O’Rourke, Sara M, Cruz, Joseph M, Pierce, Spencer R, Ecker, Jeffrey W, Carlock, Michael A, Nagashima, Kaito A, Mousa, Jarrod J, Ross, Ted M, Ward, Andrew B, and DuBois, Rebecca M
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Medical Microbiology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Influenza ,Vaccine Related ,Immunization ,Infectious Diseases ,Biodefense ,Biotechnology ,Prevention ,Emerging Infectious Diseases ,Pneumonia & Influenza ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Infection ,Good Health and Well Being ,Humans ,Orthomyxoviridae Infections ,Influenza Vaccines ,Hemagglutinins ,Influenza A Virus ,H1N1 Subtype ,Antibodies ,Viral ,Hemagglutinin Glycoproteins ,Influenza Virus ,Biological sciences ,Biomedical and clinical sciences - Abstract
Influenza virus poses an ongoing human health threat with pandemic potential. Due to mutations in circulating strains, formulating effective vaccines remains a challenge. The use of computationally optimized broadly reactive antigen (COBRA) hemagglutinin (HA) proteins is a promising vaccine strategy to protect against a wide range of current and future influenza viruses. Though effective in preclinical studies, the mechanistic basis driving the broad reactivity of COBRA proteins remains to be elucidated. Here, we report the crystal structure of the COBRA HA termed P1 and identify antigenic and glycosylation properties that contribute to its immunogenicity. We further report the cryo-EM structure of the P1-elicited broadly neutralizing antibody 1F8 bound to COBRA P1, revealing 1F8 to recognize an atypical receptor binding site epitope via an unexpected mode of binding.
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- 2023
18. Immune Prophylaxis Targeting the Respiratory Syncytial Virus (RSV) G Protein
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Bergeron, Harrison C, Murray, Jackelyn, Arora, Aakash, Castrejon, Ana M Nuñez, DuBois, Rebecca M, Anderson, Larry J, Kauvar, Lawrence M, and Tripp, Ralph A
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Microbiology ,Biological Sciences ,Prevention ,Pediatric ,Vaccine Related ,Pneumonia & Influenza ,Lung ,Biotechnology ,Immunization ,Infectious Diseases ,Pneumonia ,Development of treatments and therapeutic interventions ,5.1 Pharmaceuticals ,Infection ,Mice ,Humans ,Animals ,Aged ,Palivizumab ,Antibodies ,Viral ,Viral Fusion Proteins ,Respiratory Syncytial Virus ,Human ,Respiratory Syncytial Virus Infections ,Antibodies ,Monoclonal ,Epitopes ,RSV ,G protein ,F protein ,mAb ,3D3 ,2D10 ,palivizumab - Abstract
The respiratory syncytial virus (RSV) causes significant respiratory disease in young infants and the elderly. Immune prophylaxis in infants is currently limited to palivizumab, an anti-RSV fusion (F) protein monoclonal antibody (mAb). While anti-F protein mAbs neutralize RSV, they are unable to prevent aberrant pathogenic responses provoked by the RSV attachment (G) protein. Recently, the co-crystal structures of two high-affinity anti-G protein mAbs that bind the central conserved domain (CCD) at distinct non-overlapping epitopes were solved. mAbs 3D3 and 2D10 are broadly neutralizing and block G protein CX3C-mediated chemotaxis by binding antigenic sites γ1 and γ2, respectively, which is known to reduce RSV disease. Previous studies have established 3D3 as a potential immunoprophylactic and therapeutic; however, there has been no similar evaluation of 2D10 available. Here, we sought to determine the differences in neutralization and immunity to RSV Line19F infection which recapitulates human RSV infection in mouse models making it useful for therapeutic antibody studies. Prophylactic (24 h prior to infection) or therapeutic (72 h post-infection) treatment of mice with 3D3, 2D10, or palivizumab were compared to isotype control antibody treatment. The results show that 2D10 can neutralize RSV Line19F both prophylactically and therapeutically, and can reduce disease-causing immune responses in a prophylactic but not therapeutic context. In contrast, 3D3 was able to significantly (p < 0.05) reduce lung virus titers and IL-13 in a prophylactic and therapeutic regimen suggesting subtle but important differences in immune responses to RSV infection with mAbs that bind distinct epitopes.
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- 2023
19. Structure of the divergent human astrovirus MLB capsid spike
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Delgado-Cunningham, Kevin, López, Tomás, Khatib, Firas, Arias, Carlos F, and DuBois, Rebecca M
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Biochemistry and Cell Biology ,Biological Sciences ,1.1 Normal biological development and functioning ,2.2 Factors relating to the physical environment ,Underpinning research ,Aetiology ,Infection ,Humans ,Capsid ,Mamastrovirus ,Capsid Proteins ,Binding Sites ,Machine Learning ,capsid ,crystal structure ,human astrovirus ,protein structure prediction ,Chemical Sciences ,Information and Computing Sciences ,Biophysics ,Biological sciences ,Chemical sciences - Abstract
Despite their worldwide prevalence and association with human disease, the molecular bases of human astrovirus (HAstV) infection and evolution remain poorly characterized. Here, we report the structure of the capsid protein spike of the divergent HAstV MLB clade (HAstV MLB). While the structure shares a similar folding topology with that of classical-clade HAstV spikes, it is otherwise strikingly different. We find no evidence of a conserved receptor-binding site between the MLB and classical HAstV spikes, suggesting that MLB and classical HAstVs utilize different receptors for host-cell attachment. We provide evidence for this hypothesis using a novel HAstV infection competition assay. Comparisons of the HAstV MLB spike structure with structures predicted from its sequence reveal poor matches, but template-based predictions were surprisingly accurate relative to machine-learning-based predictions. Our data provide a foundation for understanding the mechanisms of infection by diverse HAstVs and can support structure determination in similarly unstudied systems.
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- 2022
20. Psychosomatic Illnesses: Critical Remarks on Psychosomatic Medicine
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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21. The Theory of Neuroses as a Problem: Toward a Definition and Classification of Neurotic Disorders
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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22. Noogenic Neuroses: On Neuroses with Spiritual Causes
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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23. Psychogenic Neuroses: On Neuroses with Psychological Causes
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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24. Iatrogenic Neuroses: On Neuroses Arising from a Medical Intervention
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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25. Introduction: What Is Logotherapy?
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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26. Functional Illnesses or “Pseudo-Neuroses”: On Mental Disorders Due to a Medical Condition
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Frankl, Viktor E., primary and DuBois, James M., additional
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- 2024
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27. Refining the chronology of Middle/Late Pleistocene fossil assemblages in the Argentine Pampas
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Prado, Jose Luis, Duval, Mathieu, Demuro, Martina, Santos-Arévalo, Francisco Javier, Alberdi, María Teresa, Tomassini, Rodrigo L., Montalvo, Claudia I., Bonini, Ricardo, Favier-Dubois, Cristian M., Burrough, Sallie, Bajkan, Szilvia, Gasparini, Germán M., Bellinzoni, Jonathan, Fernández, Fernando J., García-Morato, Sara, Marin-Monfort, María Dolores, Adams, Shaun, Zhao, Jian-xin, Beilinson, Elisa, and Fernández-Jalvo, Yolanda
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- 2024
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28. Behavioral activation for veterans with co-occurring alcohol use disorder and posttraumatic stress disorder: Basis and methodology for a pilot randomized controlled trial
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Blakey, Shannon M., Alsobrooks, Amber K., Morgan-López, Antonio A., Kruskamp, Nicholas, Simpson, Tracy L., Daughters, Stacey B., DuBois, Chase M., Huang, Jovin S., Evans, Janequia, Serrano, Bethzaida N., Calhoun, Patrick S., Beckham, Jean C., and Elbogen, Eric B.
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- 2024
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29. MMS Observations of a Compressed Current Sheet: Importance of the Ambipolar Electric Field
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DuBois, Ami M., Crabtree, Chris, Ganguli, Gurudas, Malaspina, David M., and Amatucci, William E.
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Physics - Space Physics ,Physics - Plasma Physics - Abstract
Spacecraft data reveals a nonuniform ambipolar electric field transverse to the magnetic field in a thin magnetotail current sheet that leads to intense ExB velocity shear and non-gyrotropic particle distributions. The ExB drift far exceeds the diamagnetic drift and drives lower hybrid waves localized to the magnetic field reversal region, which is ideally suited for the anomalous dissipation necessary for reconnection. It also reveals substructures embedded in the current density, indicating the formation of a non-ideal current sheet., Comment: 6 pages, 4 figures
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- 2022
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30. Prognosis of IGLV3-21R110 chronic lymphocytic leukemia after chemotherapy-based treatment in a real-world analysis
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Hengeveld, Paul J., Veelken, Hendrik, van Bergen, Cornelis A. M., Quinten, Edwin, Vervoordeldonk, Mischa Y. L., Ismailzada, Wahija, Barendse, Rob S., Dubois, Julie M. N., van Oers, Marinus H. J., Geisler, Christian H., Kater, Arnon P., Westerweel, Peter E., Langerak, Anton W., and Levin, Mark-David
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- 2023
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31. The Pre-Existing Human Antibody Repertoire to Computationally Optimized Influenza H1 Hemagglutinin Vaccines.
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Nagashima, Kaito, Dzimianski, John V, Han, Julianna, Abbadi, Nada, Gingerich, Aaron D, Royer, Fredejah, O'Rourke, Sara, Sautto, Giuseppe A, Ross, Ted M, Ward, Andrew B, DuBois, Rebecca M, and Mousa, Jarrod J
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunology ,Biodefense ,Biotechnology ,Pneumonia & Influenza ,Emerging Infectious Diseases ,Prevention ,Immunization ,Vaccine Related ,Influenza ,Infectious Diseases ,Infection ,Good Health and Well Being ,Antibodies ,Monoclonal ,Antibodies ,Viral ,B-Lymphocytes ,Epitopes ,Hemagglutinin Glycoproteins ,Influenza Virus ,Humans ,Influenza Vaccines ,Influenza ,Human ,Biochemistry and cell biology - Abstract
Computationally optimized broadly reactive Ag (COBRA) hemagglutinin (HA) immunogens have previously been generated for several influenza subtypes to improve vaccine-elicited Ab breadth. As nearly all individuals have pre-existing immunity to influenza viruses, influenza-specific memory B cells will likely be recalled upon COBRA HA vaccination. We determined the epitope specificity and repertoire characteristics of pre-existing human B cells to H1 COBRA HA Ags. Cross-reactivity between wild-type HA and H1 COBRA HA proteins P1, X6, and Y2 were observed for isolated mAbs. The mAbs bound five distinct epitopes on the pandemic A/California/04/2009 HA head and stem domains, and most mAbs had hemagglutination inhibition and neutralizing activity against 2009 pandemic H1 strains. Two head-directed mAbs, CA09-26 and CA09-45, had hemagglutination inhibition and neutralizing activity against a prepandemic H1 strain. One mAb, P1-05, targeted the stem region of H1 HA, but did not compete with a known stem-targeting H1 mAb. We determined that mAb P1-05 recognizes a recently discovered HA epitope, the anchor epitope, and we identified similar mAbs using B cell repertoire sequencing. In addition, the trimerization domain distance from HA was critical to recognition of this epitope by mAb P1-05, suggesting the importance of protein design for vaccine formulations. Overall, these data indicate that seasonally vaccinated individuals possess a population of functional H1 COBRA HA-reactive B cells that target head, central stalk, and anchor epitopes, and they demonstrate the importance of structure-based assessment of subunit protein vaccine candidates to ensure accessibility of optimal protein epitopes.
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- 2022
32. Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6
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Nagashima, Kaito A., Dzimianski, John V., Yang, Meng, Abendroth, Jan, Sautto, Giuseppe A., Ross, Ted M., DuBois, Rebecca M., Edwards, Thomas E., and Mousa, Jarrod J.
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- 2024
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33. Providing Adolescents with Access to Online Patient Portals: Interviews with Parent-Adolescent Dyads
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Sisk, Bryan A., Antes, Alison L., Bereitschaft, Christine, Bourgeois, Fabienne, and DuBois, James M.
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- 2024
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34. Development and validation of a classification model for boar taint detection in pork fat samples
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Rodrigues, Anaïs, Massenet, Thibault, Dubois, Lena M., Huet, Anne-Catherine, Markey, Alice, Wavreille, José, Gengler, Nicolas, Stefanuto, Pierre-Hugues, and Focant, Jean-François
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- 2024
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35. Reproductive decision making in women with medical comorbidities: a qualitative study
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Kraus, Elena M., Chavan, Niraj R., Whelan, Victoria, Goldkamp, Jennifer, and DuBois, James M.
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- 2023
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36. Early-stage measurable residual disease dynamics and IGHV repertoire reconstitution during venetoclax and obinutuzumab treatment in chronic lymphocytic leukemia
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Hengeveld, P. J., Schilperoord-Vermeulen, J., van der Klift, M. Y., Dubois, J. M. N., Kolijn, P. M., Kavelaars, F. G., Rijken, M., Dobber, J. A., Nasserinejad, K., Kersting, S., Westerweel, P. E., Kater, A. P., Langerak, A. W., and Levin, M-D.
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- 2023
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37. Structure-Based Design and Antigenic Validation of Respiratory Syncytial Virus G Immunogens
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Castrejon, Ana M Nuñez, O’Rourke, Sara M, Kauvar, Lawrence M, and DuBois, Rebecca M
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Infectious Diseases ,Biotechnology ,Pediatric ,Vaccine Related ,Immunization ,Prevention ,Lung ,Pneumonia ,2.1 Biological and endogenous factors ,3.4 Vaccines ,Aetiology ,Prevention of disease and conditions ,and promotion of well-being ,Infection ,Good Health and Well Being ,Animals ,Antibodies ,Monoclonal ,Antibodies ,Neutralizing ,Antigens ,Viral ,Epitopes ,Immunogenicity ,Vaccine ,Mice ,Mutation ,Respiratory Syncytial Virus Infections ,Respiratory Syncytial Virus Vaccines ,Respiratory Syncytial Virus ,Human ,Viral Fusion Proteins ,monoclonal antibodies ,respiratory syncytial virus ,structure-activity relationships ,vaccines ,Biological Sciences ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Virology - Abstract
Respiratory syncytial virus (RSV) is a leading cause of severe lower respiratory tract disease of children, the elderly, and immunocompromised individuals. Currently, there are no FDA-approved RSV vaccines. The RSV G glycoprotein is used for viral attachment to host cells and impairment of host immunity by interacting with the human chemokine receptor CX3CR1. Antibodies that disrupt this interaction are protective against infection and disease. Nevertheless, development of an RSV G vaccine antigen has been hindered by its low immunogenicity and safety concerns. A previous study described three engineered RSV G proteins containing single-point mutations that induce higher levels of IgG antibodies and have improved safety profiles compared to wild-type RSV G (H. C. Bergeron, J. Murray, A. M. Nuñez Castrejon, et al., Viruses 13:352, 2021, https://doi.org/10.3390/v13020352). However, it is unclear if the mutations affect RSV G protein folding and display of its conformational epitopes. In this study, we show that the RSV G S177Q protein retains high-affinity binding to protective human and mouse monoclonal antibodies and has equal reactivity as wild-type RSV G protein to human reference immunoglobulin to RSV. Additionally, we determined the high-resolution crystal structure of RSV G S177Q protein in complex with the anti-RSV G antibody 3G12, further validating its antigenic structure. These studies show for the first time that an engineered RSV G protein with increased immunogenicity and safety retains conformational epitopes to high-affinity protective antibodies, supporting its further development as an RSV vaccine immunogen. IMPORTANCE Respiratory syncytial virus (RSV) causes severe lower respiratory diseases of children, the elderly, and immunocompromised populations. There currently are no FDA-approved RSV vaccines. Most vaccine development efforts have focused on the RSV F protein, and the field has generally overlooked the receptor-binding antigen RSV G due to its poor immunogenicity and safety concerns. However, single-point mutant RSV G proteins have been previously identified that have increased immunogenicity and safety. In this study, we investigate the antibody reactivities of three known RSV G mutant proteins. We show that one mutant RSV G protein retains high-affinity binding to protective monoclonal antibodies, is equally recognized by anti-RSV antibodies in human sera, and forms the same three-dimensional structure as the wild-type RSV G protein. Our study validates the structure-guided design of the RSV G protein as an RSV vaccine antigen.
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- 2022
38. Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells
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Lareau, Caleb A., Dubois, Sonia M., Buquicchio, Frank A., Hsieh, Yu-Hsin, Garg, Kopal, Kautz, Pauline, Nitsch, Lena, Praktiknjo, Samantha D., Maschmeyer, Patrick, Verboon, Jeffrey M., Gutierrez, Jacob C., Yin, Yajie, Fiskin, Evgenij, Luo, Wendy, Mimitou, Eleni P., Muus, Christoph, Malhotra, Rhea, Parikh, Sumit, Fleming, Mark D., Oevermann, Lena, Schulte, Johannes, Eckert, Cornelia, Kundaje, Anshul, Smibert, Peter, Vardhana, Santosha A., Satpathy, Ansuman T., Regev, Aviv, Sankaran, Vijay G., Agarwal, Suneet, and Ludwig, Leif S.
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- 2023
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39. The contribution of inferential confusion and fear of self to psychological models of obsessive-compulsive symptoms: A dimensional approach
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Myers, Nicholas S., Juel, Emily K., Friedman, Joseph B., Ojalehto, Heidi J., Tadross, Maya E., DuBois, Chase M., Abramovitch, Amitai, McKay, Dean, and Abramowitz, Jonathan S.
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- 2024
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40. Structures of Two Human Astrovirus Capsid/Neutralizing Antibody Complexes Reveal Distinct Epitopes and Inhibition of Virus Attachment to Cells
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Ricemeyer, Lena, Aguilar-Hernández, Nayeli, López, Tomás, Espinosa, Rafaela, Lanning, Sarah, Mukherjee, Santanu, Cuellar, Carolina, López, Susana, Arias, Carlos F, and DuBois, Rebecca M
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunology ,Biotechnology ,Foodborne Illness ,Immunization ,Prevention ,Vaccine Related ,Emerging Infectious Diseases ,Digestive Diseases ,Biodefense ,Infectious Diseases ,Aetiology ,2.1 Biological and endogenous factors ,Infection ,Good Health and Well Being ,Amino Acid Sequence ,Antibodies ,Neutralizing ,Antibodies ,Viral ,Antibody Affinity ,Astroviridae Infections ,Capsid ,Capsid Proteins ,Epitopes ,Host-Pathogen Interactions ,Humans ,Mamastrovirus ,Models ,Molecular ,Molecular Conformation ,Protein Binding ,Structure-Activity Relationship ,Virus Attachment ,astrovirus ,capsid ,neutralizing antibodies ,protein structure-function ,Biological Sciences ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Virology ,Agricultural ,veterinary and food sciences ,Biological sciences ,Biomedical and clinical sciences - Abstract
Human astrovirus is an important cause of viral gastroenteritis worldwide. Young children, the elderly, and the immunocompromised are especially at risk for contracting severe disease. However, no vaccines exist to combat human astrovirus infection. Evidence points to the importance of antibodies in protecting healthy adults from reinfection. To develop an effective subunit vaccine that broadly protects against diverse astrovirus serotypes, we must understand how neutralizing antibodies target the capsid surface at the molecular level. Here, we report the structures of the human astrovirus capsid spike domain bound to two neutralizing monoclonal antibodies. These antibodies bind two distinct conformational epitopes on the spike surface. We add to existing evidence that the human astrovirus capsid spike contains a receptor-binding domain and demonstrate that both antibodies neutralize human astrovirus by blocking virus attachment to host cells. We identify patches of conserved amino acids which overlap or border the antibody epitopes and may constitute a receptor-binding site. Our findings provide a basis for developing therapies to prevent and treat human astrovirus gastroenteritis. IMPORTANCE Human astroviruses infect nearly every person in the world during childhood and cause diarrhea, vomiting, and fever. Despite the prevalence of this virus, little is known about how antibodies block astrovirus infection. Here, we determined the crystal structures of the astrovirus capsid protein in complex with two virus-neutralizing antibodies. We show that the antibodies bind to two distinct sites on the capsid spike domain, however, both antibodies block virus attachment to human cells. Importantly, our findings support the use of the human astrovirus capsid spike as an antigen in a subunit-based vaccine to prevent astrovirus disease.
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- 2022
41. Evaluating ApoL1 Genetic Testing Policy Options for Transplant Centers: A Delphi Consensus Panel Project with Stakeholders
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McIntosh, Tristan, Walsh, Heidi, Baldwin, Kari, Iltis, Ana, Mohan, Sumit, Sawinski, Deirdre, Goodman, Melody, and DuBois, James M.
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- 2024
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42. Data Decisions and Ethics: The Case of Stakeholder-Engaged Research
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Goodman, Melody S., Pierce, Kristyn A., DuBois, James M., Thompson, Vetta Sanders, Holm, Søren, Series Editor, Rasmussen, Lisa M., Series Editor, Engelhardt Jr., H. Tristram, Founding Editor, Spicker, Stuart F., Founding Editor, Agich, George, Editorial Board Member, Baker, Bob, Editorial Board Member, Bishop, Jeffrey, Editorial Board Member, Borovecki, Ana, Editorial Board Member, Fan, Ruiping, Editorial Board Member, Garrafa, Volnei, Editorial Board Member, Hester, D. Micah, Editorial Board Member, Hofmann, Bjørn, Editorial Board Member, Iltis, Ana, Editorial Board Member, Lantos, John, Editorial Board Member, Tollefsen, Chris, Editorial Board Member, Voo, Dr Teck Chuan, Editorial Board Member, and Anderson, Emily E., editor
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- 2023
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43. Effect of nusinersen after 3 years of treatment in 57 young children with SMA in terms of SMN2 copy number or type
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Audic, Frédérique, Dubois, Sonia M., Durigneux, Julien, Barnerias, Christine, Isapof, Arnaud, Nougues, Marie-Christine, Davion, Jean-Baptiste, Richelme, Christian, Vuillerot, Carole, Legoff, Laure, Sabouraud, Pascal, Cances, Claude, Laugel, Vincent, Ropars, Juliette, Espil-Taris, Caroline, Trommsdorff, Valérie, Pervillé, Anne, Garcia-de-la-Banda, Marta Gomez, Testard, Hervé, Chouchane, Mondher, Walther-Louvier, Ulrike, Schweizer, Cyril, Halbert, Cécile, Badri, Myriam, Quijano-Roy, Susana, Chabrol, Brigitte, and Desguerre, Isabelle
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- 2024
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44. Scratch-induced surface microstructures on the deformed surface of Al-Cu-Fe icosahedral quasicrystals
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Wu, J. S, Brien, Valerie, Brunet, P., Dong, C., and Dubois, J. -M
- Subjects
Condensed Matter - Materials Science - Abstract
Scanning electron microscopy (SEM) and transmission electron microscopy (TEM) investigations of sintered Al-Cu-Fe icosahedral quasicrystal (IQC) have been carried out to understand the origin of some ductility previously noticed within tracks produced by standard tribological scratch tests. Transformation of the icosahedral phase to a modulated structure is shown and a transformation of the IQC to a bcc phase has been found beneath the tracks. Twins and dislocations have also been observed.
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- 2020
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45. Scoping Review: Evidence-Based Assessment of Reactive Aggression in Children
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Langfus, Joshua A., Youngstrom, Eric A., DuBois, Chase M., Findling, Robert L., and Stepanova, Ekaterina
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- 2023
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46. Human Astrovirus 1-8 Seroprevalence Evaluation in a United States Adult Population.
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Meyer, Lena, Delgado-Cunningham, Kevin, Lorig-Roach, Nicholas, Ford, Jordan, and DuBois, Rebecca M
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biolayer interferometry immunosorbent assay ,human astrovirus ,seroprevalence ,Microbiology - Abstract
Human astroviruses are an important cause of viral gastroenteritis globally, yet few studies have investigated the serostatus of adults to establish rates of previous infection. Here, we applied biolayer interferometry immunosorbent assay (BLI-ISA), a recently developed serosurveillance technique, to measure the presence of blood plasma IgG antibodies directed towards the human astrovirus capsid spikes from serotypes 1-8 in a cross-sectional sample of a United States adult population. The seroprevalence rates of IgG antibodies were 73% for human astrovirus serotype 1, 62% for serotype 3, 52% for serotype 4, 29% for serotype 5, 27% for serotype 8, 22% for serotype 2, 8% for serotype 6, and 8% for serotype 7. Notably, seroprevalence rates for capsid spike antigens correlate with neutralizing antibody rates determined previously. This work is the first seroprevalence study evaluating all eight classical human astrovirus serotypes.
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- 2021
47. Editors' Note
- Author
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DuBois, James M., Iltis, Ana S., and Walsh, Heidi A.
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- 2023
48. Tuberculosis care models for children and adolescents: a scoping review/Modeles de prise en charge de la tuberculose chez les enfants et adolescents: analyse exploratoire/Modelos de atencion a la tuberculosis para ninos y adolescentes: una revision exploratoria
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Yuen, Courtney M., Szkwarko, Daria, Dubois, Melanie M., Shahbaz, Shumail, Yuengling, Katharine A., Urbanowski, Michael E., Bain, Paul A., Brands, Annemieke, Masini, Tiziana, Verkuijl, Sabine, Viney, Kerri, Hirsch-Moverman, Yael, and Hussain, Hamidah
- Subjects
Tuberculosis -- Analysis ,Online databases -- Analysis ,Children -- Analysis ,Online database ,Health - Abstract
Objective To map which tuberculosis care models are best suited for children and adolescents. Methods We conducted a scoping review to assess the impact of decentralized, integrated and family-centred care on child and adolescent tuberculosis-related outcomes, describe approaches for these care models and identify key knowledge gaps. We searched seven literature databases on 5 February 2021 (updated 16 February 2022), searched the references of 18 published reviews and requested data from ongoing studies. We included studies from countries with a high tuberculosis burden that used a care model of interest and reported tuberculosis diagnostic, treatment or prevention outcomes for an age group < 20 years old. Findings We identified 28 studies with a comparator group for the impact assessment and added 19 non-comparative studies to a qualitative analysis of care delivery approaches. Approaches included strengthening capacity in primary-level facilities, providing services in communities, screening for tuberculosis in other health services, co-locating tuberculosis and human immunodeficiency virus treatment, offering a choice of treatment location and providing social or economic support. Strengthening both decentralized diagnostic services and community linkages led to one-to-sevenfold increases in case detection across nine studies and improved prevention outcomes. We identified only five comparative studies on integrated or family-centred care, but 11 non-comparative studies reported successful treatment outcomes for at least 71% of children and adolescents. Conclusion Strengthening decentralized services in facilities and communities can improve tuberculosis outcomes for children and adolescents. Further research is needed to identify optimal integrated and family-centred care approaches. Objectif Caracteriser les modeles de prise en charge de la tuberculose les mieux adaptes aux enfants et adolescents. Methodes Nous avons mene une analyse exploratoire afin d'evaluer l'impact d'une prise en charge decentralisee, integree et articulee autour du noyau familial sur les resultats observes chez les enfants et adolescents traites pour une tuberculose, mais aussi de decrire les approches employees pour ces modeles de soins et d'identifier les principales lacunes dans les connaissances a ce sujet. Nous avons effectue des recherches dans sept bases de donnees dediees a la litterature le 5 fevrier 2021 (mise a jour le 16 fevrier 2022), examine les references de 18 revues publiees et demande des informations issues d'etudes en cours. Nous avons inclus des etudes provenant de pays fortement touches par la tuberculose, qui utilisaient un modele de prise en charge digne d'interet et faisaient mention de resultats de diagnostic, de traitement ou de prevention pour une categorie d'age < 20 ans. Resultats Nous avons identifie 28 etudes avec un groupe de comparaison pour mesurer l'impact, et nous avons ajoute 19 etudes non comparatives a une analyse qualitative des approches de prestation de soins. Parmi ces approches figuraient le renforcement des capacites dans les etablissements de niveau primaire, la fourniture de services au sein des communautes, le depistage de la tuberculose dans d'autres services de sante, le regroupement des traitements contre la tuberculose et le virus de l'immunodeficience humaine, la possibilite pour le patient de choisir son lieu de traitement et enfin, la mise a disposition d'une aide sociale ou economique. Developper a la fois les services de diagnostic decentralises et les reseaux communautaires a permis de multiplier par sept le depistage des cas dans neuf etudes, et d'optimiser les resultats de prevention. Nous n'avons trouve que cinq etudes comparatives consacrees aux soins integres ou articules autour du noyau familial. En revanche, 11 etudes non comparatives ont indique que le traitement avait ete couronne de succes chez au moins 71% des enfants et adolescents. Conclusion Renforcer les services decentralises dans les etablissements et communautes peut contribuer a ameliorer l'etat des enfants et adolescents souffrant de tuberculose. D'autres recherches sont necessaires pour degager les meilleures approches integrees et articulees autour du noyau familial. Objetivo Establecer que modelos de atencion a la tuberculosis son los mas adecuados para los ninos y adolescentes. Metodos Se realizo una revision exploratoria para evaluar los impactos de la atencion descentralizada, integrada y orientada a la familia en los desenlaces relacionados con la tuberculosis en ninos y adolescentes, describir los enfoques de estos modelos de atencion e identificar las principales deficiencias de conocimiento. Se realizaron busquedas en siete bases de datos bibliograficas el 5 de febrero de 2021 (actualizadas el 16 de febrero de 2022), se buscaron las referencias de 18 revisiones publicadas y se solicitaron datos de estudios en curso. Se incluyeron estudios de paises con una alta carga de tuberculosis que emplearan un modelo de atencion de interes e informaran sobre los resultados de diagnostico, tratamiento o prevencion de la tuberculosis en un grupo de edad Resultados Se identificaron 28 estudios con un grupo comparativo para la evaluacion del impacto y se anadieron 19 estudios no comparativos a un analisis cualitativo de los enfoques de prestacion de atencion. Los enfoques incluyeron el fortalecimiento de la capacidad en los centros de nivel primario, la prestacion de servicios en las comunidades, la deteccion de la tuberculosis en otros servicios sanitarios, la ubicacion conjunta del tratamiento de la tuberculosis y del virus de la inmunodeficiencia humana, la posibilidad de que el paciente elija el lugar de tratamiento y la prestacion de apoyo social o economico. El refuerzo de los servicios de diagnostico descentralizados y de los vinculos con la comunidad permitio multiplicar de una a siete veces la deteccion de casos en nueve estudios y mejorar los resultados de la prevencion. Solo se identificaron cinco estudios comparativos sobre la atencion integrada u orientada a la familia, pero 11 estudios no comparativos informaron de resultados de tratamiento exitosos en al menos el 71% de los ninos y adolescentes. Conclusion El refuerzo de los servicios descentralizados en los centros y las comunidades puede mejorar los desenlaces de la tuberculosis en ninos y adolescentes. Es preciso seguir investigando para determinar los enfoques optimos de atencion integrada y orientada a la familia., Introduction Of the roughly 10 million people who develop active tuberculosis annually, around one in every six is a child or adolescent aged 0-19 years old. (1,2) In 2020, less [...]
- Published
- 2022
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49. Respiratory Syncytial Virus (RSV) G Protein Vaccines With Central Conserved Domain Mutations Induce CX3C-CX3CR1 Blocking Antibodies.
- Author
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Bergeron, Harrison C, Murray, Jackelyn, Nuñez Castrejon, Ana M, DuBois, Rebecca M, and Tripp, Ralph A
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CX3CR1 ,G glycoprotein ,G protein ,RSV ,antibodies ,respiratory syncytial virus ,vaccine ,Microbiology - Abstract
Respiratory syncytial virus (RSV) infection can cause bronchiolitis, pneumonia, morbidity, and some mortality, primarily in infants and the elderly, for which no vaccine is available. The RSV attachment (G) protein contains a central conserved domain (CCD) with a CX3C motif implicated in the induction of protective antibodies, thus vaccine candidates containing the G protein are of interest. This study determined if mutations in the G protein CCD would mediate immunogenicity while inducing G protein CX3C-CX3CR1 blocking antibodies. BALB/c mice were vaccinated with structurally-guided, rationally designed G proteins with CCD mutations. The results show that these G protein immunogens induce a substantial anti-G protein antibody response, and using serum IgG from the vaccinated mice, these antibodies are capable of blocking the RSV G protein CX3C-CX3CR1 binding while not interfering with CX3CL1, fractalkine.
- Published
- 2021
50. Protein Disulfide Isomerase A4 Is Involved in Genome Uncoating during Human Astrovirus Cell Entry
- Author
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Aguilar-Hernández, Nayeli, Meyer, Lena, López, Susana, DuBois, Rebecca M, and Arias, Carlos F
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Biotechnology ,Digestive Diseases ,Emerging Infectious Diseases ,Infectious Diseases ,2.2 Factors relating to the physical environment ,Aetiology ,Infection ,Astroviridae Infections ,Capsid Proteins ,Cell Line ,Cells ,Cultured ,Host-Pathogen Interactions ,Humans ,Mamastrovirus ,Protein Binding ,Protein Disulfide-Isomerases ,Virus Internalization ,Virus Uncoating ,astrovirus ,protein disulfide isomerase ,virus entry ,Microbiology - Abstract
Although human astroviruses (HAstVs) are important agents of gastroenteritis in young children, the studies aimed at characterizing their biology have been limited, in particular regarding their cell entry process. It has been shown that HAstV serotype 8 enters human cells by a classical clathrin-mediated endocytosis pathway; however, the cell receptor or other cell entry factors that may be relevant for an efficient viral infection are unknown. In this work we used a far-Western blotting approach to identify cellular proteins that interact with the recombinant capsid spike proteins of HAstV serotypes 1, 2, and 8, synthesized in Escherichia coli. We identified the 72 kDa protein disulfide isomerase A4 (PDIA4) as a binding partner for HAstV-1 and -8 spikes, but not for the HAstV-2 spike. In agreement with this observation, the PDI inhibitor 16F16 strongly blocked infection by HAstV serotypes 1 and 8, but not serotype 2. RNA interference of PDIA4 expression selectively blocked HAstV-8 infectivity. We also showed that the PDI activity does not affect virus binding or internalization but is required for uncoating of the viral genome.
- Published
- 2021
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