7 results on '"Drake III, Donald R."'
Search Results
2. Bridging Computational Vaccinology and Vaccine Development Through Systematic Identification, Characterization, and Downselection of Conserved and Variable Circumsporozoite Protein CD4 T Cell Epitopes From Diverse Plasmodium falciparum Strains.
- Author
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Noe, Amy R., Terry, Frances E., Schanen, Brian C., Sassano, Emily, Hindocha, Pooja, Phares, Timothy W., Moise, Leonard, Christen, Jayne M., Tucker, Kenneth D., Kotraiah, Vinayaka, Drake III, Donald R., Martin, William D., De Groot, Anne S., and Gutierrez, Gabriel M.
- Subjects
MONONUCLEAR leukocytes ,CIRCUMSPOROZOITE protein ,CD4 antigen ,REGULATORY T cells ,T cells ,HISTOCOMPATIBILITY antigens - Abstract
An effective malaria vaccine must prevent disease in a range of populations living in regions with vastly different transmission rates and protect against genetically-diverse Plasmodium falciparum (Pf) strains. The protective efficacy afforded by the currently licensed malaria vaccine, Mosquirix™, promotes strong humoral responses to Pf circumsporozoite protein (CSP) 3D7 but protection is limited in duration and by strain variation. Helper CD4 T cells are central to development of protective immune responses, playing roles in B cell activation and maturation processes, cytokine production, and stimulation of effector T cells. Therefore, we took advantage of recent in silico modeling advances to predict and analyze human leukocyte antigen (HLA)-restricted class II epitopes from PfCSP – across the entire PfCSP 3D7 sequence as well as in 539 PfCSP sequence variants – with the goal of improving PfCSP-based malaria vaccines. Specifically, we developed a systematic workflow to identify peptide sequences capable of binding HLA-DR in a context relevant to achieving broad human population coverage utilizing cognate T cell help and with limited T regulatory cell activation triggers. Through this workflow, we identified seven predicted class II epitope clusters in the N- and C-terminal regions of PfCSP 3D7 and an additional eight clusters through comparative analysis of 539 PfCSP sequence variants. A subset of these predicted class II epitope clusters was synthesized as peptides and assessed for HLA-DR binding in vitro. Further, we characterized the functional capacity of these peptides to prime and activate human peripheral blood mononuclear cells (PBMCs), by monitoring cytokine response profiles using MIMIC
® technology (Modular IMmune In vitro Construct). Utilizing this decision framework, we found sufficient differential cellular activation and cytokine profiles among HLA-DR-matched PBMC donors to downselect class II epitope clusters for inclusion in a vaccine targeting PfCSP. Importantly, the downselected clusters are not highly conserved across PfCSP variants but rather, they overlap a hypervariable region (TH2R) in the C-terminus of the protein. We recommend assessing these class II epitope clusters within the context of a PfCSP vaccine, employing a test system capable of measuring immunogenicity across a broad set of HLA-DR alleles. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
3. Identification, Selection and Immune Assessment of Liver Stage CD8 T Cell Epitopes From Plasmodium falciparum.
- Author
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Tucker, Kenneth D., Schanen, Brian C., Phares, Timothy W., Sassano, Emily, Terry, Frances E., Hindocha, Pooja, Moise, Leonard, Kotraiah, Vinayaka, Martin, William D., De Groot, Anne S., Drake III, Donald R., Gutierrez, Gabriel M., and Noe, Amy R.
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HISTOCOMPATIBILITY class I antigens ,T cells ,ANTIGENS ,HISTOCOMPATIBILITY antigens ,EPITOPES ,PLASMODIUM falciparum ,MALARIA vaccines - Abstract
Immunization with radiation-attenuated sporozoites (RAS) has been shown to protect against malaria infection, primarily through CD8 T cell responses, but protection is limited based on parasite strain. Therefore, while CD8 T cells are an ideal effector population target for liver stage malaria vaccine development strategies, such strategies must incorporate conserved epitopes that cover a large range of class I human leukocyte antigen (HLA) supertypes to elicit cross-strain immunity across the target population. This approach requires identifying and characterizing a wide range of CD8 T cell epitopes for incorporation into a vaccine such that coverage across a large range of class I HLA alleles is attained. Accordingly, we devised an experimental framework to identify CD8 T cell epitopes from novel and minimally characterized antigens found at the pre-erythrocytic stage of parasite development. Through in silico analysis we selected conserved P. falciparum proteins, using P. vivax orthologues to establish stringent conservation parameters, predicted to have a high number of T cell epitopes across a set of six class I HLA alleles representative of major supertypes. Using the decision framework, five proteins were selected based on the density and number of predicted epitopes. Selected epitopes were synthesized as peptides and evaluated for binding to the class I HLA alleles in vitro to verify in silico binding predictions, and subsequently for stimulation of human T cells using the Modular IMmune In-vitro Construct (MIMIC
® ) technology to verify immunogenicity. By combining the in silico tools with the ex vivo high throughput MIMIC platform, we identified 15 novel CD8 T cell epitopes capable of stimulating an immune response in alleles across the class I HLA panel. We recommend these epitopes should be evaluated in appropriate in vivo humanized immune system models to determine their protective efficacy for potential inclusion in future vaccines. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
4. Exposure to Titanium Dioxide Nanomaterials Provokes Inflammation of an in Vitro Human Immune Construct
- Author
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Schanen, Brian C., primary, Karakoti, Ajay S., additional, Seal, Sudipta, additional, Drake III, Donald R., additional, Warren, William L., additional, and Self, William T., additional
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- 2009
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5. Immunomodulation and T Helper TH1/TH2 Response Polarization by CeO2 and TiO2 Nanoparticles
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Schanen, Brian C., Das, Soumen, Reilly, Christopher M., Warren, William L., Self, William T., Seal, Sudipta, and Drake III, Donald R.
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IMMUNOREGULATION ,T helper cells ,NANOPARTICLES ,CERIUM oxides ,TITANIUM dioxide ,ANTI-inflammatory agents ,BIOTECHNOLOGY ,NANOTECHNOLOGY - Abstract
Immunomodulation by nanoparticles, especially as related to the biochemical properties of these unique materials, has scarcely been explored. In an in vitro model of human immunity, we demonstrate two catalytic nanoparticles, TiO
2 (oxidant) and CeO2 (antioxidant), have nearly opposite effects on human dendritic cells and T helper (TH ) cells. For example, whereas TiO2 nanoparticles potentiated DC maturation that led towards TH 1-biased responses, treatment with antioxidant CeO2 nanoparticles induced APCs to secrete the anti-inflammatory cytokine, IL-10, and induce a TH 2-dominated T cell profile. In subsequent studies, we demonstrate these results are likely explained by the disparate capacities of the nanoparticles to modulate ROS, since TiO2 , but not CeO2 NPs, induced inflammatory responses through an ROS/inflammasome/IL-1β pathway. This novel capacity of metallic NPs to regulate innate and adaptive immunity in profoundly different directions via their ability to modulate dendritic cell function has strong implications for human health since unintentional exposure to these materials is common in modern societies. [ABSTRACT FROM AUTHOR]- Published
- 2013
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6. Not all effector CD8+ T cells are alike
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Drake III, Donald R. and Braciale, Thomas J.
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T cells , *LYMPHOID tissue - Abstract
As naive CD8+ T cells circulate throughout the bloodstream and secondary lymphoid tissues (i.e. spleen and lymph nodes), they sample complexes of peptides and MHC class I molecules expressed on the surface of professional antigen presenting cells (APCs). A proper fit between lymphocyte and APCs sets into motion a complex series of events that result in the generation of activated cytotoxic T lymphocytes (CTLs) that are the principal immune effectors against infected and transformed cells. Owing to the severe immunopathology that can result from the aberrant stimulation of CTLs, the activation of nai¨ve CD8+ T cells is a tightly regulated process. A growing body of evidence suggests that the quality of stimulation nai¨ve CD8+ T cells receive during the induction and maintenance of an immune response dictates the functional competency of the responding antigen-specific CTLs, and that CD8+ T cells and their progeny “effector cells” can exist long-term in vastly different activation states. [Copyright &y& Elsevier]
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- 2003
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7. Exposure to Titanium Dioxide Nanomaterials Provokes Inflammation of an in VitroHuman Immune Construct
- Author
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Schanen, Brian C., Karakoti, Ajay S., Seal, Sudipta, Drake III, Donald R., Warren, William L., and Self, William T.
- Abstract
Nanoparticle technology is undergoing significant expansion largely because of the potential of nanoparticles as biomaterials, drug delivery vehicles, cancer therapeutics, and immunopotentiators. Incorporation of nanoparticle technologies for in vivoapplications increases the urgency to characterize nanomaterial immunogenicity. This study explores titanium dioxide, one of the most widely manufactured nanomaterials, synthesized into its three most common nanoarchitectures: anatase (7−10 nm), rutile (15−20 nm), and nanotube (10−15 nm diameters, 70−150 nm length). The fully human autologous MIMIC immunological construct has been utilized as a predictive, nonanimal alternative to diagnose nanoparticle immunogenicity. Cumulatively, treatment with titanium dioxide nanoparticles in the MIMIC system led to elevated levels of proinflammatory cytokines and increased maturation and expression of costimulatory molecules on dendritic cells. Additionally, these treatments effectively primed activation and proliferation of naïve CD4+T cells in comparison to dendritic cells treated with micrometer-sized (>1 μm) titanium dioxide, characteristic of an in vivoinflammatory response.
- Published
- 2009
- Full Text
- View/download PDF
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