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1. Supervised Multiple Kernel Learning approaches for multi-omics data integration

2. Improvement of variables interpretability in kernel PCA

3. Integrated analysis of whole blood oxylipin and cytokine responses after bacterial, viral, and T cell stimulation reveals new immune networks

4. Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques

6. Metabolic plasticity of HIV-specific CD8+ T cells is associated with enhanced antiviral potential and natural control of HIV-1 infection

12. Rhesus negative males have an enhanced IFNγ-mediated immune response to influenza A virus

13. The risk of COVID-19 death is much greater and age-dependent with type I IFN autoantibodies

15. Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths

16. Additional file 1 of Gene expression analysis in EBV-infected ataxia-telangiectasia cell lines by RNA-sequencing reveals protein synthesis defect and immune abnormalities

18. Additional file 7 of Gene expression analysis in EBV-infected ataxia-telangiectasia cell lines by RNA-sequencing reveals protein synthesis defect and immune abnormalities

19. Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus

20. A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

23. Tri-mannose grafting of chitosan nanocarriers remodels the macrophage response to bacterial infection

24. Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot

26. Individual co-variation between viral RNA load and gene expression reveals novel host factors during early dengue virus infection of the Aedes aegypti midgut

28. Temporal transcriptomic response during arsenic stress in Herminiimonas arsenicoxydans

29. From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma

30. Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans

31. FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance

32. Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression

33. Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate

34. Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite

35. Erratum to: Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans

36. Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite

37. Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas

41. Bacteriocin from epidemicListeriastrains alters the host intestinal microbiota to favor infection

43. Comparative analysis of viral RNA signatures on different RIG-I-like receptors

44. Author response: Comparative analysis of viral RNA signatures on different RIG-I-like receptors

46. Expansion of the SOS regulon of <italic>Vibrio cholerae</italic> through extensive transcriptome analysis and experimental validation.

49. Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae

50. Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding

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